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Asym. Unit
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Asym.Unit (53 KB)
Biol.Unit 1 (50 KB)
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(1)
Title
:
BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR), D8M MUTANT, BOUND TO MANGANESE
Authors
:
A. Glasfeld, E. Guedon, J. D. Helmann, R. G. Brennan
Date
:
26 Feb 03 (Deposition) - 15 Jul 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.61
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Helix-Turn-Helix, Dna-Binding Protein, Metalloregulatory Protein, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Glasfeld, E. Guedon, J. D. Helmann, R. G. Brennan
Structure Of The Manganese-Bound Manganese Transport Regulator Of Bacillus Subtilis
Nat. Struct. Biol. V. 10 652 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: MANGANESE (II) ION (MNa)
1b: MANGANESE (II) ION (MNb)
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No.
Name
Count
Type
Full Name
1
MN
2
Ligand/Ion
MANGANESE (II) ION
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Sites
(2, 2)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:11 , HIS A:77 , GLU A:102 , HOH A:151 , HOH A:152
BINDING SITE FOR RESIDUE MN A 150
2
AC2
SOFTWARE
GLU B:11 , HIS B:77 , GLU B:102 , HOH B:151
BINDING SITE FOR RESIDUE MN B 150
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1on2a1 (A:2-62)
1b: SCOP_d1on2b1 (B:2-62)
2a: SCOP_d1on2a2 (A:63-136)
2b: SCOP_d1on2b2 (B:63-136)
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
Iron-dependent repressor protein
(44)
Protein domain
:
Manganese transport regulator MntR
(11)
Bacillus subtilis [TaxId: 1423]
(11)
1a
d1on2a1
A:2-62
1b
d1on2b1
B:2-62
Fold
:
Iron-dependent repressor protein, dimerization domain
(45)
Superfamily
:
Iron-dependent repressor protein, dimerization domain
(45)
Family
:
Iron-dependent repressor protein, dimerization domain
(44)
Protein domain
:
Manganese transport regulator MntR
(11)
Bacillus subtilis [TaxId: 1423]
(11)
2a
d1on2a2
A:63-136
2b
d1on2b2
B:63-136
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1on2A01 (A:2-73)
1b: CATH_1on2B01 (B:2-73)
2a: CATH_1on2A02 (A:74-136)
2b: CATH_1on2B02 (B:74-136)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Bacillus subtilis. Organism_taxid: 1423.
(6)
1a
1on2A01
A:2-73
1b
1on2B01
B:2-73
Topology
:
Diphtheria Toxin Repressor; domain 2
(34)
Homologous Superfamily
:
Diphtheria Toxin Repressor, domain 2
(32)
Bacillus subtilis. Organism_taxid: 1423.
(2)
2a
1on2A02
A:74-136
2b
1on2B02
B:74-136
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Fe_dep_repr_C_1on2B01 (B:63-132)
1b: PFAM_Fe_dep_repr_C_1on2B02 (B:63-132)
2a: PFAM_Fe_dep_repress_1on2B03 (B:2-60)
2b: PFAM_Fe_dep_repress_1on2B04 (B:2-60)
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Clan
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HTH
(544)
Family
:
Fe_dep_repr_C
(11)
Bacillus subtilis
(2)
1a
Fe_dep_repr_C-1on2B01
B:63-132
1b
Fe_dep_repr_C-1on2B02
B:63-132
Family
:
Fe_dep_repress
(10)
Bacillus subtilis
(2)
2a
Fe_dep_repress-1on2B03
B:2-60
2b
Fe_dep_repress-1on2B04
B:2-60
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Asymmetric Unit 1
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