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1OKC
Asym. Unit
Info
Asym.Unit (62 KB)
Biol.Unit 1 (55 KB)
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(1)
Title
:
STRUCTURE OF MITOCHONDRIAL ADP/ATP CARRIER IN COMPLEX WITH CARBOXYATRACTYLOSIDE
Authors
:
E. Pebay-Peyroula, C. Dahout-Gonzalez, R. Kahn, V. Trezeguet, G. J. -M. Lauquin, G. Brandolin
Date
:
21 Jul 03 (Deposition) - 07 Nov 03 (Release) - 29 Jan 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Mitochondrial Transporter, Nucleotide Translocation, Membrane Protein, Carrier Protein, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Pebay-Peyroula, C. Dahout-Gonzalez, R. Kahn, V. Trezeguet, G. J. -M. Lauquin, G. Brandolin
Structure Of Mitochondrial Adp/Atp Carrier In Complex With Carboxyatractyloside
Nature V. 426 39 2003
[
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: CARDIOLIPIN (CDLa)
1b: CARDIOLIPIN (CDLb)
1c: CARDIOLIPIN (CDLc)
2a: CARBOXYATRACTYLOSIDE (CXTa)
3a: 3-LAURYLAMIDO-N,N'-DIMETHYLPROPYLA... (LDMa)
3b: 3-LAURYLAMIDO-N,N'-DIMETHYLPROPYLA... (LDMb)
4a: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHO... (PC1a)
4b: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHO... (PC1b)
4c: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHO... (PC1c)
4d: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHO... (PC1d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CDL
3
Ligand/Ion
CARDIOLIPIN
2
CXT
1
Ligand/Ion
CARBOXYATRACTYLOSIDE
3
LDM
2
Ligand/Ion
3-LAURYLAMIDO-N,N'-DIMETHYLPROPYLAMINOXYDE
4
PC1
4
Ligand/Ion
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
[
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:79 , ASN A:87 , LYS A:91 , GLY A:123 , LEU A:127 , GLY A:182 , ILE A:183 , ARG A:187 , SER A:227 , PHE A:230 , ASP A:231 , ARG A:234 , HOH A:2004 , HOH A:2038 , HOH A:2076 , HOH A:2077 , HOH A:2078 , HOH A:2079
BINDING SITE FOR RESIDUE CXT A 401
02
AC2
SOFTWARE
TRP A:70 , ARG A:71 , GLY A:72 , ASN A:73 , LEU A:74 , TRP A:109 , LEU A:140 , PC1 A:980 , HOH A:2024 , HOH A:2080
BINDING SITE FOR RESIDUE CDL A 800
03
AC3
SOFTWARE
ILE A:53 , ILE A:54 , PHE A:270 , GLY A:272 , ALA A:273 , TRP A:274 , SER A:275 , PC1 A:983 , HOH A:2083
BINDING SITE FOR RESIDUE CDL A 801
04
AC4
SOFTWARE
CYS A:128 , PHE A:176 , ASN A:177 , GLN A:181 , LEU A:289
BINDING SITE FOR RESIDUE CDL A 802
05
AC5
SOFTWARE
PRO A:266 , PHE A:269 , PHE A:270 , LDM A:904
BINDING SITE FOR RESIDUE LDM A 903
06
AC6
SOFTWARE
VAL A:226 , PRO A:229 , PHE A:230 , TRP A:257 , LDM A:903
BINDING SITE FOR RESIDUE LDM A 904
07
AC7
SOFTWARE
LEU A:74 , PHE A:108 , TRP A:109 , THR A:154 , GLY A:155 , LEU A:156 , GLY A:157 , ASN A:158 , GLY A:192 , ASP A:195 , THR A:196 , CDL A:800
BINDING SITE FOR RESIDUE PC1 A 980
08
AC8
SOFTWARE
LYS A:106 , GLN A:107 , PHE A:108 , TRP A:109 , ARG A:110 , ALA A:113 , PC1 A:982
BINDING SITE FOR RESIDUE PC1 A 981
09
AC9
SOFTWARE
PHE A:66 , LEU A:67 , ARG A:110 , ALA A:113 , PC1 A:981 , HOH A:2082
BINDING SITE FOR RESIDUE PC1 A 982
10
BC1
SOFTWARE
CDL A:801 , HOH A:2083
BINDING SITE FOR RESIDUE PC1 A 983
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: SOLCAR (A:5-97|A:110-200|A:211-293)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SOLCAR
PS50920
Solute carrier (Solcar) repeat profile.
ADT1_BOVIN
6-98
111-201
212-297
3
A:5-97
A:110-200
A:211-293
[
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Exons
(4, 4)
Info
All Exons
Exon 1.1 (A:2-36)
Exon 1.2 (A:37-199)
Exon 1.3 (A:199-246)
Exon 1.4 (A:246-293)
View:
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000017580
1
ENSBTAE00000308039
chr27:
16804263-16804478
216
ADT1_BOVIN
1-37
37
1
A:2-36
35
1.2
ENSBTAT00000017580
2
ENSBTAE00000142717
chr27:
16805766-16806252
487
ADT1_BOVIN
38-200
163
1
A:37-199
163
1.3
ENSBTAT00000017580
3
ENSBTAE00000142718
chr27:
16806758-16806898
141
ADT1_BOVIN
200-247
48
1
A:199-246
48
1.4
ENSBTAT00000017580
4
ENSBTAE00000142719
chr27:
16807779-16808280
502
ADT1_BOVIN
247-298
52
1
A:246-293
48
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1okca_ (A:)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Mitochondrial carrier
(4)
Superfamily
:
Mitochondrial carrier
(4)
Family
:
Mitochondrial carrier
(2)
Protein domain
:
ADP,ATP carrier protein
(1)
Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
(1)
1a
d1okca_
A:
[
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]
CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1okcA00 (A:2-293)
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Topologies
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(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha/alpha barrel
(251)
Topology
:
Mitochondrial carrier fold
(2)
Homologous Superfamily
:
Mitochondrial carrier domain
(2)
Bovine (Bos taurus)
(2)
1a
1okcA00
A:2-293
[
close CATH info
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Mito_carr_1okcA01 (A:205-293)
1b: PFAM_Mito_carr_1okcA02 (A:205-293)
1c: PFAM_Mito_carr_1okcA03 (A:205-293)
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Clans
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(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Mito_carr]
(1)
Family
:
Mito_carr
(1)
Bos taurus (Bovine)
(1)
1a
Mito_carr-1okcA01
A:205-293
1b
Mito_carr-1okcA02
A:205-293
1c
Mito_carr-1okcA03
A:205-293
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Protein
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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