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1OHU
Biol. Unit 1
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Asym.Unit (60 KB)
Biol.Unit 1 (29 KB)
Biol.Unit 2 (29 KB)
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(1)
Title
:
STRUCTURE OF CAENORHABDITIS ELEGANS CED-9
Authors
:
J. -S. Jeong, N. -C. Ha, B. -H. Oh
Date
:
31 May 03 (Deposition) - 14 Aug 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.03
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Apoptosis, Ced-9, Bcl-2 Family
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. -S. Woo, J. -S. Jung, N. -C. Ha, J. Shin, K. -H. Kim, W. Lee, B. -H. Oh
Unique Structural Features Of A Bcl-2 Family Protein Ced-9 And Biophysical Characterization Of Ced-9/Egl-1 Interactions
Cell Death Differ. V. 10 1310 2003
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Hetero Components
(1, 9)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
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No.
Name
Count
Type
Full Name
1
MSE
9
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: BH4_2 (A:80-99)
2: BCL2_FAMILY (A:116-223)
3: BH1 (A:165-179)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BH4_2
PS50063
Apoptosis regulator, Bcl-2 family BH4 motif profile.
CED9_CAEEL
80-99
1
A:80-99
-
2
BCL2_FAMILY
PS50062
BCL2-like apoptosis inhibitors family profile.
CED9_CAEEL
116-223
1
A:116-223
-
3
BH1
PS01080
Apoptosis regulator, Bcl-2 family BH1 motif signature.
CED9_CAEEL
160-179
1
A:165-179
-
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Exons
(0, 0)
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1ohua_ (A:)
1b: SCOP_d1ohub_ (B:)
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Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Toxins' membrane translocation domains
(135)
Superfamily
:
Bcl-2 inhibitors of programmed cell death
(113)
Family
:
Bcl-2 inhibitors of programmed cell death
(102)
Protein domain
:
Apoptosis regulator ced-9
(2)
Nematode (Caenorhabditis elegans) [TaxId: 6239]
(2)
1a
d1ohua_
A:
1b
d1ohub_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1ohuB00 (B:75-242)
1b: CATH_1ohuA00 (A:71-242)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Apoptosis Regulator Bcl-x
(29)
Homologous Superfamily
:
Apoptosis Regulator Bcl-x
(29)
Caenorhabditis elegans. Organism_taxid: 6239.
(2)
1a
1ohuB00
B:75-242
1b
1ohuA00
A:71-242
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_BH4_1ohuB01 (B:76-102)
1b: PFAM_BH4_1ohuB02 (B:76-102)
2a: PFAM_Bcl_2_1ohuB03 (B:116-221)
2b: PFAM_Bcl_2_1ohuB04 (B:116-221)
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Clan
:
no clan defined [family: BH4]
(30)
Family
:
BH4
(30)
Caenorhabditis elegans
(2)
1a
BH4-1ohuB01
B:76-102
1b
BH4-1ohuB02
B:76-102
Clan
:
no clan defined [family: Bcl-2]
(60)
Family
:
Bcl-2
(60)
Caenorhabditis elegans
(2)
2a
Bcl-2-1ohuB03
B:116-221
2b
Bcl-2-1ohuB04
B:116-221
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Asym.Unit (60 KB)
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