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1NKF
Asym. Unit
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Asym.Unit (83 KB)
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Models
(30 )
Title
:
CALCIUM-BINDING PEPTIDE, NMR, 30 STRUCTURES
Authors
:
H. Sticht, A. Ejchart
Date
:
09 Mar 98 (Deposition) - 16 Feb 99 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (30 x)
Keywords
:
Ef Hand Calcium Binding Loop, Alpha-Helix, Nmr Structure, Calcium-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Siedlecka, G. Goch, A. Ejchart, H. Sticht, A. Bierzyski
Alpha-Helix Nucleation By A Calcium-Binding Peptide Loop.
Proc. Natl. Acad. Sci. Usa V. 96 903 1999
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(3, 3)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
2a: LANTHANUM (III) ION (LAa)
3a: AMINO GROUP (NH2a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
2
LA
1
Ligand/Ion
LANTHANUM (III) ION
3
NH2
1
Mod. Amino Acid
AMINO GROUP
[
close Hetero Component info
]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:1 , ASP A:3 , ASP A:5 , TYR A:7 , GLU A:12
BINDING SITE FOR RESIDUE LA A 18
[
close Site info
]
SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_073276 (D3V, chain A, )
2: VAR_073277 (D5I, chain A, )
3: VAR_069223 (D5S, chain A, )
4: VAR_073278 (Q16G, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_073276
D
96
V
CALM_HUMAN
Disease (LQT15)
---
A
D
3
V
2
UniProt
VAR_073277
N
98
I
CALM_HUMAN
Disease (LQT15)
---
A
D
5
I
3
UniProt
VAR_069223
N
98
S
CALM_HUMAN
Disease (CPVT4)
---
A
D
5
S
4
UniProt
VAR_073278
D
130
G
CALM_HUMAN
Disease (LQT14)
---
A
Q
16
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (-|-|-|A:15-15,-|-|-|A:15-15,-|-|-|...)
2: EF_HAND_1 (-|-|A:1-12|-,-|-|A:1-12|-,-|-|A:1-...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM_ORYLA
1-36
37-72
74-109
110-136
1
-
-
-
A:15-15
CALM1_HUMAN
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM_ANAPL
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM_BOVIN
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM_CHICK
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CAM2B_XENLA
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM_RABIT
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM_TETCF
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CAM2A_XENLA
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM3_MOUSE
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM3_RAT
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALMA_ARBPU
8-43
44-79
81-116
117-142
1
-
-
-
A:15-15
CALM_ONCSP
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM1_MOUSE
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM1_RAT
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM1_XENLA
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM2_HUMAN
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM2_MOUSE
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM2_RAT
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
CALM3_HUMAN
8-43
44-79
81-116
117-149
1
-
-
-
A:15-15
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM_ORYLA
14-26
50-62
87-99
123-135
1
-
-
A:1-12
-
CALM1_HUMAN
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM_ANAPL
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM_BOVIN
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM_CHICK
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CAM2B_XENLA
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM_RABIT
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM_TETCF
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CAM2A_XENLA
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM3_MOUSE
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM3_RAT
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALMA_ARBPU
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM_ONCSP
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM1_MOUSE
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM1_RAT
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM1_XENLA
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM2_HUMAN
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM2_MOUSE
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM2_RAT
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
CALM3_HUMAN
21-33
57-69
94-106
130-142
1
-
-
A:1-12
-
[
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]
Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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)
Protein
Nucleic
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Sidechain
Hetero
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Solvent
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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