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1NA6
Asym. Unit
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Asym.Unit (132 KB)
Biol.Unit 1 (128 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE ECORII MUTANT R88A
Authors
:
X. E. Zhou, Y. Wang, M. Reuter, M. Mucke, D. H. Kruger, E. J. Meehan, L. Chen
Date
:
26 Nov 02 (Deposition) - 16 Dec 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Site-Specific Restriction; Mutation; Replication, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. E. Zhou, Y. Wang, M. Reuter, M. Mucke, D. H. Kruger, E. J. Meehan, L. Chen
Crystal Structure Of Type Iie Restriction Endonuclease Ecorii Reveals An Autoinhibition Mechanism By A Novel Effector-Binding Fold.
J. Mol. Biol. V. 335 307 2004
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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Exons
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SCOP Domains
(2, 4)
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All SCOP Domains
1a: SCOP_d1na6a1 (A:4-178)
1b: SCOP_d1na6b1 (B:4-178)
2a: SCOP_d1na6a2 (A:179-398)
2b: SCOP_d1na6b2 (B:183-402)
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Class
:
All beta proteins
(24004)
Fold
:
DNA-binding pseudobarrel domain
(3)
Superfamily
:
DNA-binding pseudobarrel domain
(3)
Family
:
Type II restriction endonuclease effector domain
(1)
Protein domain
:
Restriction endonuclease EcoRII, N-terminal domain
(1)
Escherichia coli [TaxId: 562]
(1)
1a
d1na6a1
A:4-178
1b
d1na6b1
B:4-178
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Restriction endonuclease-like
(209)
Superfamily
:
Restriction endonuclease-like
(170)
Family
:
Type II restriction endonuclease catalytic domain
(1)
Protein domain
:
Restriction endonuclease EcoRII, C-terminal domain
(1)
Escherichia coli [TaxId: 562]
(1)
2a
d1na6a2
A:179-398
2b
d1na6b2
B:183-402
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CATH Domains
(1, 2)
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1a: CATH_1na6A01 (A:4-177)
1b: CATH_1na6B01 (B:4-177)
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
At1g16640 B3 domain
(3)
Homologous Superfamily
:
At1g16640 B3 domain
(3)
Escherichia coli. Organism_taxid: 562.
(1)
1a
1na6A01
A:4-177
1b
1na6B01
B:4-177
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Pfam Domains
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all PFAM domains
1a: PFAM_EcoRII_N_1na6B01 (B:12-168)
1b: PFAM_EcoRII_N_1na6B02 (B:12-168)
2a: PFAM_EcoRII_C_1na6B03 (B:229-393)
2b: PFAM_EcoRII_C_1na6B04 (B:229-393)
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Clan
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DNA_b-psBarrel
(3)
Family
:
EcoRII-N
(1)
Escherichia coli
(1)
1a
EcoRII-N-1na6B01
B:12-168
1b
EcoRII-N-1na6B02
B:12-168
Clan
:
PDDEXK
(13)
Family
:
EcoRII-C
(1)
Escherichia coli
(1)
2a
EcoRII-C-1na6B03
B:229-393
2b
EcoRII-C-1na6B04
B:229-393
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Asym.Unit (132 KB)
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