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Theor. Model
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Theoretical Model (44 KB)
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(1)
Title
:
THEORETICAL MODEL OF THE CATALYTIC DOMAIN OF 3',5'-CYCLIC NUCLEOTIDE PHOSPHODIESTERASE 1C
Authors
:
S. Sunitatajne, S. Ramadevi, K. Srikanth
Date
:
06 Jun 02 (Deposition) - 26 Jun 02 (Release) - 20 Nov 02 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Sunitatajne, S. Ramadevi, K. Srikanth
Theoretical Model Of The Catalytic Domain Of 3', 5'-Cyclic Nucleotide Phosphodiesterase 1C
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PDEASE_I (A:106-117)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDEASE_I
PS00126
3'5'-cyclic nucleotide phosphodiesterases signature.
PDE1C_HUMAN
268-279
1
A:106-117
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Exons
(9, 9)
Info
All Exons
Exon 1.10 (A:1-2)
Exon 1.11b (A:3-41)
Exon 1.12b (A:42-88)
Exon 1.13b (A:89-122)
Exon 1.14a (A:122-165)
Exon 1.15 (A:165-199)
Exon 1.16 (A:199-239)
Exon 1.17 (A:240-267)
Exon 1.18 (A:267-298)
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All Exon Boundaries
01: Boundary 1.9b/1.10
02: Boundary 1.10/1.11b
03: Boundary 1.11b/1.12b
04: Boundary 1.12b/1.13b
05: Boundary 1.13b/1.14a
06: Boundary 1.14a/1.15
07: Boundary 1.15/1.16
08: Boundary 1.16/1.17
09: Boundary 1.17/1.18
10: Boundary 1.18/1.19
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.6b
ENST00000396191
6b
ENSE00001524194
chr7:
32110461-32109905
557
PDE1C_HUMAN
1-34
34
0
-
-
1.7
ENST00000396191
7
ENSE00001017114
chr7:
32091192-32091166
27
PDE1C_HUMAN
34-43
10
0
-
-
1.8b
ENST00000396191
8b
ENSE00001123687
chr7:
31920473-31920360
114
PDE1C_HUMAN
43-81
39
0
-
-
1.9b
ENST00000396191
9b
ENSE00001123680
chr7:
31918791-31918609
183
PDE1C_HUMAN
81-142
62
0
-
-
1.10
ENST00000396191
10
ENSE00001123670
chr7:
31917649-31917583
67
PDE1C_HUMAN
142-164
23
1
A:1-2
2
1.11b
ENST00000396191
11b
ENSE00001123662
chr7:
31913021-31912905
117
PDE1C_HUMAN
165-203
39
1
A:3-41
39
1.12b
ENST00000396191
12b
ENSE00001123654
chr7:
31904696-31904556
141
PDE1C_HUMAN
204-250
47
1
A:42-88
47
1.13b
ENST00000396191
13b
ENSE00001123649
chr7:
31890355-31890255
101
PDE1C_HUMAN
251-284
34
1
A:89-122
34
1.14a
ENST00000396191
14a
ENSE00001123646
chr7:
31887710-31887582
129
PDE1C_HUMAN
284-327
44
1
A:122-165
44
1.15
ENST00000396191
15
ENSE00001123640
chr7:
31877585-31877484
102
PDE1C_HUMAN
327-361
35
1
A:165-199
35
1.16
ENST00000396191
16
ENSE00001123635
chr7:
31876914-31876794
121
PDE1C_HUMAN
361-401
41
1
A:199-239
41
1.17
ENST00000396191
17
ENSE00001123631
chr7:
31867987-31867906
82
PDE1C_HUMAN
402-429
28
1
A:240-267
28
1.18
ENST00000396191
18
ENSE00001123627
chr7:
31864601-31864481
121
PDE1C_HUMAN
429-469
41
1
A:267-298
32
1.19
ENST00000396191
19
ENSE00001123622
chr7:
31862862-31862687
176
PDE1C_HUMAN
469-528
60
0
-
-
1.21
ENST00000396191
21
ENSE00001123614
chr7:
31855768-31855538
231
PDE1C_HUMAN
528-605
78
0
-
-
1.22
ENST00000396191
22
ENSE00001123608
chr7:
31848722-31848645
78
PDE1C_HUMAN
605-631
27
0
-
-
1.24
ENST00000396191
24
ENSE00001123599
chr7:
31815346-31815278
69
PDE1C_HUMAN
631-654
24
0
-
-
1.25b
ENST00000396191
25b
ENSE00001434206
chr7:
31793167-31792632
536
PDE1C_HUMAN
654-709
56
0
-
-
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