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1LFE
Theor. Model
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Theoretical Model (28 KB)
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(1)
Title
:
THEORETICAL MODEL OF HUMAN GAMMA C CRYSTALLIN
Authors
:
A. Salim, Z. H. Zaidi
Date
:
11 Apr 02 (Deposition) - 01 May 02 (Release) - 07 Jan 03 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A
Keywords
:
Gamma Crystallin, Eye Lens Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Salim, Z. H. Zaidi
Homology Models Of Human Gamma-Crystallins: Structural Study Of The Extensive Charge Network In Gamma-Crystallins.
Biochem. Biophys. Res. Comm. V. 300 624 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_021142 (T4P, chain A, )
2: VAR_038432 (F5L, chain A, )
3: VAR_021143 (R47H, chain A, )
4: VAR_067212 (G128C, chain A, )
5: VAR_021144 (R168W, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021142
T
5
P
CRGC_HUMAN
Disease (CTRCT2)
---
A
T
4
P
2
UniProt
VAR_038432
F
6
L
CRGC_HUMAN
Polymorphism
2242072
A
F
5
L
3
UniProt
VAR_021143
R
48
H
CRGC_HUMAN
Polymorphism
61751949
A
R
47
H
4
UniProt
VAR_067212
G
129
C
CRGC_HUMAN
Disease (CTRCT2)
---
A
G
128
C
5
UniProt
VAR_021144
R
169
W
CRGC_HUMAN
Disease (CTRCT2)
---
A
R
168
W
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: CRYSTALLIN_BETA_GAMMA (A:1-39|A:40-82|A:87-127|A:128-170)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CRYSTALLIN_BETA_GAMMA
PS50915
Crystallins beta and gamma 'Greek key' motif profile.
CRGC_HUMAN
2-40
41-83
88-128
129-171
4
A:1-39
A:40-82
A:87-127
A:128-170
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Exons
(3, 3)
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All Exons
Exon 1.1 (A:1-2)
Exon 1.2 (A:3-83)
Exon 1.3 (A:84-173)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000282141
1
ENSE00001695790
chr2:
208994554-208994508
47
CRGC_HUMAN
1-3
3
1
A:1-2
2
1.2
ENST00000282141
2
ENSE00000796724
chr2:
208994407-208994165
243
CRGC_HUMAN
4-84
81
1
A:3-83
81
1.3
ENST00000282141
3
ENSE00000796725
chr2:
208993199-208992861
339
CRGC_HUMAN
85-174
90
1
A:84-173
90
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Chain A
Asymmetric Unit 1
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