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1LB3
Biol. Unit 1
Info
Asym.Unit (83 KB)
Biol.Unit 1, α-C (1.7 MB)
Biol.Unit 1 (1.7 MB)
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(1)
Title
:
STRUCTURE OF RECOMBINANT MOUSE L CHAIN FERRITIN AT 1.2 A RESOLUTION
Authors
:
T. Granier, B. Langlois D'Estaintot, B. Gallois, J. -M. Chevalier, G. Precigoux, P. Santambrogio, P. Arosio
Date
:
02 Apr 02 (Deposition) - 28 Jan 03 (Release) - 01 Feb 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.21
Chains
:
Asym. Unit : A
Biol. Unit 1: A (24x)
Keywords
:
Iron Storage, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Granier, B. Langlois D'Estaintot, B. Gallois, J. -M. Chevalier, G. Precigoux, P. Santambrogio, P. Arosio
Structural Description Of The Active Sites Of Mouse L-Chain Ferritin At 1. 2A Resolution
J. Biol. Inorg. Chem. V. 8 105 2003
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Hetero Components
(2, 96)
Info
All Hetero Components
1a: CADMIUM ION (CDa)
1b: CADMIUM ION (CDb)
1c: CADMIUM ION (CDc)
1d: CADMIUM ION (CDd)
1e: CADMIUM ION (CDe)
1f: CADMIUM ION (CDf)
1g: CADMIUM ION (CDg)
1h: CADMIUM ION (CDh)
1i: CADMIUM ION (CDi)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CD
-1
Ligand/Ion
CADMIUM ION
2
GOL
48
Ligand/Ion
GLYCEROL
3
SO4
48
Ligand/Ion
SULFATE ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:10 , ASN A:11 , HOH A:204 , HOH A:209 , HOH A:310 , HOH A:372
BINDING SITE FOR RESIDUE SO4 A 187
02
AC2
SOFTWARE
SER A:13 , THR A:14 , GLU A:15 , ARG A:124
BINDING SITE FOR RESIDUE SO4 A 188
03
AC3
SOFTWARE
ASP A:84 , GLN A:86
BINDING SITE FOR RESIDUE CD A 717
04
AC4
SOFTWARE
GLU A:60 , GLU A:64 , HOH A:505 , HOH A:506 , CD A:722
BINDING SITE FOR RESIDUE CD A 718
05
AC5
SOFTWARE
GLU A:61 , GLU A:64 , HOH A:505 , HOH A:506 , CD A:718
BINDING SITE FOR RESIDUE CD A 722
06
AC6
SOFTWARE
GLU A:57 , GLU A:60 , HOH A:507
BINDING SITE FOR RESIDUE CD A 723
07
AC7
SOFTWARE
ASP A:131 , SER A:135 , HOH A:508 , HOH A:509 , HOH A:510 , HOH A:511 , HOH A:512
BINDING SITE FOR RESIDUE CD A 715
08
AC8
SOFTWARE
GLU A:134 , HOH A:452 , HOH A:513 , HOH A:514 , HOH A:515 , HOH A:520
BINDING SITE FOR RESIDUE CD A 716
09
AC9
SOFTWARE
HIS A:136 , HOH A:409 , HOH A:516 , HOH A:517 , HOH A:518
BINDING SITE FOR RESIDUE CD A 719
10
BC1
SOFTWARE
HIS A:118 , CYS A:130 , GLU A:134 , HOH A:435 , HOH A:452 , HOH A:513 , HOH A:515 , HOH A:519 , HOH A:520 , HOH A:521
BINDING SITE FOR RESIDUE CD A 720
11
BC2
SOFTWARE
HIS A:53 , GLU A:57 , HOH A:522 , HOH A:523 , HOH A:524
BINDING SITE FOR RESIDUE CD A 721
12
BC3
SOFTWARE
GLU A:49 , LYS A:147 , ASN A:150 , ARG A:180 , HOH A:239 , HOH A:348 , HOH A:349 , HOH A:380
BINDING SITE FOR RESIDUE GOL A 724
13
BC4
SOFTWARE
PHE A:39 , ARG A:56 , GLU A:67 , ARG A:68 , HOH A:229 , HOH A:250 , HOH A:442 , HOH A:443
BINDING SITE FOR RESIDUE GOL A 189
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(3, 72)
Info
All PROSITE Patterns/Profiles
1: FERRITIN_LIKE (A:10-159)
2: FERRITIN_1 (A:61-79)
3: FERRITIN_2 (A:126-146)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FERRITIN_LIKE
PS50905
Ferritin-like diiron domain profile.
FRIL1_MOUSE
7-156
24
A:10-159
2
FERRITIN_1
PS00540
Ferritin iron-binding regions signature 1.
FRIL1_MOUSE
58-76
24
A:61-79
3
FERRITIN_2
PS00204
Ferritin iron-binding regions signature 2.
FRIL1_MOUSE
123-143
24
A:126-146
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1lb3a_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Ferritin-like
(533)
Superfamily
:
Ferritin-like
(489)
Family
:
Ferritin
(232)
Protein domain
:
(Apo)ferritin
(68)
Mouse (Mus musculus) [TaxId: 10090]
(2)
1a
d1lb3a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1lb3A00 (A:6-184)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Ferritin;
(180)
Homologous Superfamily
:
[code=1.20.1260.10, no name defined]
(180)
House mouse (Mus musculus)
(2)
1a
1lb3A00
A:6-184
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Pfam Domains
(0, 0)
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all PFAM domains
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Atom Selection
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Protein
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
Asymmetric Unit 4
Asymmetric Unit 5
Asymmetric Unit 6
Asymmetric Unit 7
Asymmetric Unit 8
Asymmetric Unit 9
Asymmetric Unit 10
Asymmetric Unit 11
Asymmetric Unit 12
Asymmetric Unit 13
Asymmetric Unit 14
Asymmetric Unit 15
Asymmetric Unit 16
Asymmetric Unit 17
Asymmetric Unit 18
Asymmetric Unit 19
Asymmetric Unit 20
Asymmetric Unit 21
Asymmetric Unit 22
Asymmetric Unit 23
Asymmetric Unit 24
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (83 KB)
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Biol.Unit 1 (1.7 MB)
Header - Biol.Unit 1
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