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Asym. Unit
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Asym.Unit (58 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (104 KB)
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Title
:
CA2+-BINDING MIMICRY IN THE CRYSTAL STRUCTURE OF THE EU3+-BOUND MUTANT HUMAN MACROPHAGE CAPPING PROTEIN CAP G
Authors
:
S. M. Vorobiev, F. S. Southwick, S. C. Almo
Date
:
28 Jun 01 (Deposition) - 28 Jun 02 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Actin, Human, Capping, Cap G, Macrophage, Gcap39, Mbhl, Gelsolin, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. M. Vorobiev, F. S. Southwick, S. C. Almo
Crystal Structure Of Mutant Human Macrophage Capping Protei
To Be Published
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 2)
Info
All Hetero Components
1a: EUROPIUM (III) ION (EU3a)
1b: EUROPIUM (III) ION (EU3b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EU3
2
Ligand/Ion
EUROPIUM (III) ION
[
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]
Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:45 , ASP A:46 , GLN A:320
BINDING SITE FOR RESIDUE EU3 A 401
2
AC2
SOFTWARE
SER A:254 , ASP A:279 , ASP A:280 , GLU A:304
BINDING SITE FOR RESIDUE EU3 A 402
[
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]
SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_047776 (V41I, chain A, )
2: VAR_047777 (R197W, chain A, )
3: VAR_047778 (R334R, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_047776
V
41
I
CAPG_HUMAN
Polymorphism
2229668
A
V
41
I
2
UniProt
VAR_047777
R
198
W
CAPG_HUMAN
Polymorphism
11539103
A
R
197
W
3
UniProt
VAR_047778
H
335
R
CAPG_HUMAN
Polymorphism
6886
A
R
334
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(8, 8)
Info
All Exons
Exon 1.8f (A:11-66)
Exon 1.8h (A:66-117)
Exon 1.9b (A:118-171 (gaps))
Exon 1.10c (A:172-221)
Exon 1.11b (A:222-252 (gaps))
Exon 1.12b (A:253-297)
Exon 1.14b (A:297-326)
Exon 1.15f (A:327-346)
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All Exon Boundaries
1: Boundary 1.8b/1.8f
2: Boundary 1.8f/1.8h
3: Boundary 1.8h/1.9b
4: Boundary 1.9b/1.10c
5: Boundary 1.10c/1.11b
6: Boundary 1.11b/1.12b
7: Boundary 1.12b/1.14b
8: Boundary 1.14b/1.15f
9: Boundary 1.15f/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.5a
ENST00000263867
5a
ENSE00001516724
chr2:
85637676-85637440
237
CAPG_HUMAN
-
0
0
-
-
1.8b
ENST00000263867
8b
ENSE00002196509
chr2:
85629281-85629246
36
CAPG_HUMAN
1-8
8
0
-
-
1.8f
ENST00000263867
8f
ENSE00000799801
chr2:
85629080-85628908
173
CAPG_HUMAN
8-66
59
1
A:11-66
56
1.8h
ENST00000263867
8h
ENSE00000767214
chr2:
85628806-85628652
155
CAPG_HUMAN
66-117
52
1
A:66-117
52
1.9b
ENST00000263867
9b
ENSE00000463255
chr2:
85628452-85628288
165
CAPG_HUMAN
118-172
55
1
A:118-171 (gaps)
55
1.10c
ENST00000263867
10c
ENSE00000463256
chr2:
85626408-85626259
150
CAPG_HUMAN
173-222
50
1
A:172-221
50
1.11b
ENST00000263867
11b
ENSE00002151230
chr2:
85625905-85625813
93
CAPG_HUMAN
223-253
31
1
A:222-252 (gaps)
31
1.12b
ENST00000263867
12b
ENSE00000767210
chr2:
85625275-85625143
133
CAPG_HUMAN
254-298
45
1
A:253-297
45
1.14b
ENST00000263867
14b
ENSE00000463259
chr2:
85622749-85622661
89
CAPG_HUMAN
298-327
30
1
A:297-326
30
1.15f
ENST00000263867
15f
ENSE00000799800
chr2:
85622081-85621871
211
CAPG_HUMAN
328-348
21
1
A:327-346
20
[
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]
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1jhwa1 (A:11-124)
1b: SCOP_d1jhwa2 (A:125-234)
1c: SCOP_d1jhwa3 (A:245-346)
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Classes
(
)
(
)
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(
)
(
)
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(
)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Gelsolin-like
(96)
Superfamily
:
Actin depolymerizing proteins
(88)
Family
:
Gelsolin-like
(43)
Protein domain
:
Macrophage capping protein Cap G
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1jhwa1
A:11-124
1b
d1jhwa2
A:125-234
1c
d1jhwa3
A:245-346
[
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1jhwA02 (A:132-233)
1b: CATH_1jhwA03 (A:246-345)
1c: CATH_1jhwA01 (A:11-119)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Severin
(74)
Homologous Superfamily
:
Severin
(74)
Human (Homo sapiens)
(36)
1a
1jhwA02
A:132-233
1b
1jhwA03
A:246-345
1c
1jhwA01
A:11-119
[
close CATH info
]
Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Gelsolin_1jhwA01 (A:263-340)
1b: PFAM_Gelsolin_1jhwA02 (A:263-340)
1c: PFAM_Gelsolin_1jhwA03 (A:263-340)
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Clan
:
ADF
(44)
Family
:
Gelsolin
(23)
Homo sapiens (Human)
(13)
1a
Gelsolin-1jhwA01
A:263-340
1b
Gelsolin-1jhwA02
A:263-340
1c
Gelsolin-1jhwA03
A:263-340
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Asymmetric Unit 1
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Asym.Unit (58 KB)
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