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Biol. Unit 2
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Biol.Unit 2 (104 KB)
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Title
:
CA2+-BINDING MIMICRY IN THE CRYSTAL STRUCTURE OF THE EU3+-BOUND MUTANT HUMAN MACROPHAGE CAPPING PROTEIN CAP G
Authors
:
S. M. Vorobiev, F. S. Southwick, S. C. Almo
Date
:
28 Jun 01 (Deposition) - 28 Jun 02 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Actin, Human, Capping, Cap G, Macrophage, Gcap39, Mbhl, Gelsolin, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. M. Vorobiev, F. S. Southwick, S. C. Almo
Crystal Structure Of Mutant Human Macrophage Capping Protei
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: EUROPIUM (III) ION (EU3a)
1b: EUROPIUM (III) ION (EU3b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EU3
4
Ligand/Ion
EUROPIUM (III) ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:45 , ASP A:46 , GLN A:320
BINDING SITE FOR RESIDUE EU3 A 401
2
AC2
SOFTWARE
SER A:254 , ASP A:279 , ASP A:280 , GLU A:304
BINDING SITE FOR RESIDUE EU3 A 402
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_047776 (V41I, chain A, )
2: VAR_047777 (R197W, chain A, )
3: VAR_047778 (R334R, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_047776
V
41
I
CAPG_HUMAN
Polymorphism
2229668
A
V
41
I
2
UniProt
VAR_047777
R
198
W
CAPG_HUMAN
Polymorphism
11539103
A
R
197
W
3
UniProt
VAR_047778
H
335
R
CAPG_HUMAN
Polymorphism
6886
A
R
334
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1jhwa1 (A:11-124)
1b: SCOP_d1jhwa2 (A:125-234)
1c: SCOP_d1jhwa3 (A:245-346)
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Protein Domains
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Organisms
(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Gelsolin-like
(96)
Superfamily
:
Actin depolymerizing proteins
(88)
Family
:
Gelsolin-like
(43)
Protein domain
:
Macrophage capping protein Cap G
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1jhwa1
A:11-124
1b
d1jhwa2
A:125-234
1c
d1jhwa3
A:245-346
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1jhwA02 (A:132-233)
1b: CATH_1jhwA03 (A:246-345)
1c: CATH_1jhwA01 (A:11-119)
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)
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Severin
(74)
Homologous Superfamily
:
Severin
(74)
Human (Homo sapiens)
(36)
1a
1jhwA02
A:132-233
1b
1jhwA03
A:246-345
1c
1jhwA01
A:11-119
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Gelsolin_1jhwA01 (A:263-340)
1b: PFAM_Gelsolin_1jhwA02 (A:263-340)
1c: PFAM_Gelsolin_1jhwA03 (A:263-340)
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Clan
:
ADF
(44)
Family
:
Gelsolin
(23)
Homo sapiens (Human)
(13)
1a
Gelsolin-1jhwA01
A:263-340
1b
Gelsolin-1jhwA02
A:263-340
1c
Gelsolin-1jhwA03
A:263-340
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Asym.Unit (58 KB)
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