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1J2Q
Asym. Unit
Info
Asym.Unit (493 KB)
Biol.Unit 1 (966 KB)
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(1)
Title
:
20S PROTEASOME IN COMPLEX WITH CALPAIN-INHIBITOR I FROM ARCHAEOGLOBUS FULGIDUS
Authors
:
M. Groll, H. Brandstetter, H. Bartunik, G. Bourenkow, R. Huber
Date
:
08 Jan 03 (Deposition) - 18 Mar 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.83
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N (2x)
Keywords
:
Proteasome, Ubiquitin, 20S, Cp, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Groll, H. Brandstetter, H. Bartunik, G. Bourenkow, R. Huber
Investigations On The Maturation And Regulation Of Archaebacterial Proteasomes
J. Mol. Biol. V. 327 75 2003
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Hetero Components
(1, 7)
Info
All Hetero Components
1a: 2-ACETYLAMINO-4-METHYL-PENTANOIC A... (CIBa)
1b: 2-ACETYLAMINO-4-METHYL-PENTANOIC A... (CIBb)
1c: 2-ACETYLAMINO-4-METHYL-PENTANOIC A... (CIBc)
1d: 2-ACETYLAMINO-4-METHYL-PENTANOIC A... (CIBd)
1e: 2-ACETYLAMINO-4-METHYL-PENTANOIC A... (CIBe)
1f: 2-ACETYLAMINO-4-METHYL-PENTANOIC A... (CIBf)
1g: 2-ACETYLAMINO-4-METHYL-PENTANOIC A... (CIBg)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CIB
7
Ligand/Ion
2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE
[
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR H:1 , ALA H:20 , THR H:21 , MET H:22 , ALA H:27 , ALA H:31 , LYS H:33 , THR H:45 , GLY H:47 , SER H:48 , VAL H:49 , ASP I:114 , HOH I:1105
BINDING SITE FOR RESIDUE CIB H 1001
2
AC2
SOFTWARE
THR I:1 , ARG I:19 , ALA I:20 , THR I:21 , MET I:22 , ALA I:27 , LYS I:33 , THR I:45 , GLY I:47 , SER I:48 , VAL I:49 , HOH I:1113 , ASP J:114
BINDING SITE FOR RESIDUE CIB I 1101
3
AC3
SOFTWARE
THR J:1 , ALA J:20 , THR J:21 , ALA J:27 , LYS J:33 , THR J:45 , GLY J:47 , SER J:48 , VAL J:49 , ASP K:114
BINDING SITE FOR RESIDUE CIB J 1201
4
AC4
SOFTWARE
THR K:1 , ALA K:20 , THR K:21 , LYS K:32 , LYS K:33 , THR K:45 , GLY K:47 , SER K:48 , VAL K:49 , HOH K:1303 , ASP L:114
BINDING SITE FOR RESIDUE CIB K 1301
5
AC5
SOFTWARE
THR L:1 , ALA L:20 , THR L:21 , ALA L:27 , LYS L:32 , GLY L:47 , SER L:48 , VAL L:49 , ASP M:114 , ILE M:120
BINDING SITE FOR RESIDUE CIB L 1401
6
AC6
SOFTWARE
THR M:1 , ALA M:20 , THR M:21 , MET M:22 , ALA M:27 , LYS M:32 , GLY M:47 , SER M:48 , VAL M:49 , ILE N:120
BINDING SITE FOR RESIDUE CIB M 1501
7
AC7
SOFTWARE
ASP H:114 , THR N:1 , ALA N:20 , THR N:21 , MET N:22 , ALA N:27 , LYS N:33 , THR N:45 , GLY N:47 , SER N:48 , VAL N:49
BINDING SITE FOR RESIDUE CIB N 1601
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 14)
Info
All PROSITE Patterns/Profiles
1: PROTEASOME_BETA_1 (H:4-51,I:4-51,J:4-51,K:4-51,L:4-51...)
2: PROTEASOME_ALPHA_2 (A:23-233,B:23-233,C:23-233,D:23-23...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEASOME_BETA_1
PS00854
Proteasome beta-type subunits signature.
PSB_ARCFU
15-62
7
H:4-51
I:4-51
J:4-51
K:4-51
L:4-51
M:4-51
N:4-51
2
PROTEASOME_ALPHA_2
PS51475
Proteasome alpha-type subunit profile.
PSA_ARCFU
23-233
7
A:23-233
B:23-233
C:23-233
D:23-233
E:23-233
F:23-233
G:23-233
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 14)
Info
All SCOP Domains
1a: SCOP_d1j2qa_ (A:)
1b: SCOP_d1j2qd_ (D:)
1c: SCOP_d1j2qe_ (E:)
1d: SCOP_d1j2qf_ (F:)
1e: SCOP_d1j2qg_ (G:)
1f: SCOP_d1j2qb_ (B:)
1g: SCOP_d1j2qc_ (C:)
2a: SCOP_d1j2qh_ (H:)
2b: SCOP_d1j2qi_ (I:)
2c: SCOP_d1j2qj_ (J:)
2d: SCOP_d1j2qk_ (K:)
2e: SCOP_d1j2ql_ (L:)
2f: SCOP_d1j2qm_ (M:)
2g: SCOP_d1j2qn_ (N:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Proteasome subunits
(222)
Protein domain
:
Proteasome alpha subunit (non-catalytic)
(66)
Archaeoglobus fulgidus [TaxId: 2234]
(2)
1a
d1j2qa_
A:
1b
d1j2qd_
D:
1c
d1j2qe_
E:
1d
d1j2qf_
F:
1e
d1j2qg_
G:
1f
d1j2qb_
B:
1g
d1j2qc_
C:
Protein domain
:
Proteasome beta subunit (catalytic)
(61)
Archaeoglobus fulgidus [TaxId: 2234]
(1)
2a
d1j2qh_
H:
2b
d1j2qi_
I:
2c
d1j2qj_
J:
2d
d1j2qk_
K:
2e
d1j2ql_
L:
2f
d1j2qm_
M:
2g
d1j2qn_
N:
[
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CATH Domains
(1, 14)
Info
all CATH domains
1a: CATH_1j2qA00 (A:10-233M)
1b: CATH_1j2qD00 (D:10-233M)
1c: CATH_1j2qE00 (E:10-233M)
1d: CATH_1j2qF00 (F:10-233M)
1e: CATH_1j2qG00 (G:10-233M)
1f: CATH_1j2qH00 (H:1-198)
1g: CATH_1j2qI00 (I:1-198)
1h: CATH_1j2qJ00 (J:1-198)
1i: CATH_1j2qK00 (K:1-198)
1j: CATH_1j2qL00 (L:1-198)
1k: CATH_1j2qM00 (M:1-198)
1l: CATH_1j2qN00 (N:1-198)
1m: CATH_1j2qB00 (B:10-233M)
1n: CATH_1j2qC00 (C:10-233M)
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)
Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(128)
Homologous Superfamily
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(124)
Archaeoglobus fulgidus. Organism_taxid: 2234.
(2)
1a
1j2qA00
A:10-233M
1b
1j2qD00
D:10-233M
1c
1j2qE00
E:10-233M
1d
1j2qF00
F:10-233M
1e
1j2qG00
G:10-233M
1f
1j2qH00
H:1-198
1g
1j2qI00
I:1-198
1h
1j2qJ00
J:1-198
1i
1j2qK00
K:1-198
1j
1j2qL00
L:1-198
1k
1j2qM00
M:1-198
1l
1j2qN00
N:1-198
1m
1j2qB00
B:10-233M
1n
1j2qC00
C:10-233M
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Pfam Domains
(0, 0)
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all PFAM domains
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