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(1)
Title
:
STRUCTURE AND FUNCTION OF INTERLEUKIN-1, BASED ON CRYSTALLOGRAPHIC AND MODELING STUDIES
Authors
:
B. Veerapandian
Date
:
29 Feb 92 (Deposition) - 31 Oct 93 (Release) - 31 Oct 93 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A
Keywords
:
Cytokine
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Veerapandian
Structure And Function Of Interleukin-1, Based On Crystallographic And Modeling Studies
Biophys. J. V. 62 112 1992
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_014600 (N13D, chain A, )
2: VAR_014306 (D26N, chain A, )
3: VAR_014601 (D64H, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_014600
N
125
D
IL1A_HUMAN
Polymorphism
17562
A
N
13
D
2
UniProt
VAR_014306
D
138
N
IL1A_HUMAN
Polymorphism
3783581
A
D
26
N
3
UniProt
VAR_014601
D
176
H
IL1A_HUMAN
Polymorphism
1801715
A
D
64
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
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All PROSITE Patterns/Profiles
1: INTERLEUKIN_1 (A:122-142)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
INTERLEUKIN_1
PS00253
Interleukin-1 signature.
IL1A_HUMAN
234-254
1
A:122-142
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Exons
(3, 3)
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All Exons
Exon 1.5 (A:9-52)
Exon 1.6 (A:52-93)
Exon 1.7 (A:94-159)
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1: Boundary 1.4/1.5
2: Boundary 1.5/1.6
3: Boundary 1.6/1.7
4: Boundary 1.7/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000263339
1
ENSE00001325622
chr2:
113542167-113542020
148
IL1A_HUMAN
-
0
0
-
-
1.2
ENST00000263339
2
ENSE00001128612
chr2:
113541355-113541301
55
IL1A_HUMAN
1-16
16
0
-
-
1.3
ENST00000263339
3
ENSE00001145252
chr2:
113540341-113540293
49
IL1A_HUMAN
16-32
17
0
-
-
1.4
ENST00000263339
4
ENSE00000856832
chr2:
113539403-113539181
223
IL1A_HUMAN
33-107
75
0
-
-
1.5
ENST00000263339
5
ENSE00000773893
chr2:
113537243-113537073
171
IL1A_HUMAN
107-164
58
1
A:9-52
44
1.6
ENST00000263339
6
ENSE00000773892
chr2:
113535688-113535564
125
IL1A_HUMAN
164-205
42
1
A:52-93
42
1.7
ENST00000263339
7
ENSE00001128606
chr2:
113532844-113531492
1353
IL1A_HUMAN
206-271
66
1
A:94-159
66
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Pfam Domains
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