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1I49
Asym. Unit
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Asym.Unit (75 KB)
Biol.Unit 1 (71 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF ARFAPTIN
Authors
:
C. Tarricone, B. Xiao, N. Justin, S. J. Gamblin, S. J. Smerdon
Date
:
20 Feb 01 (Deposition) - 16 May 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Tarricone, B. Xiao, N. Justin, P. A. Walker, K. Rittinger, S. J. Gamblin, S. J. Smerdon
The Structural Basis Of Arfaptin-Mediated Cross-Talk Between Rac And Arf Signalling Pathways.
Nature V. 411 215 2001
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: AH (A:25-223,B:25-223)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
AH
PS50870
Arfaptin homology (AH) domain profile.
ARFP2_HUMAN
121-321
2
A:25-223
B:25-223
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Exons
(4, 8)
Info
All Exons
Exon 1.4c (A:23-83 | B:23-83)
Exon 1.6b (A:84-136 | B:84-136)
Exon 1.7 (A:136-194 | B:136-194)
Exon 1.8c (A:195-223 | B:195-223)
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All Exon Boundaries
1: Boundary 1.3i/1.4c
2: Boundary 1.4c/1.6b
3: Boundary 1.6b/1.7
4: Boundary 1.7/1.8c
5: Boundary 1.8c/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000396777
1a
ENSE00001890156
chr11:
6502666-6502461
206
ARFP2_HUMAN
-
0
0
-
-
1.3a
ENST00000396777
3a
ENSE00002159393
chr11:
6501693-6501553
141
ARFP2_HUMAN
1-33
33
0
-
-
1.3f
ENST00000396777
3f
ENSE00001661153
chr11:
6501298-6501202
97
ARFP2_HUMAN
34-66
33
0
-
-
1.3i
ENST00000396777
3i
ENSE00000903319
chr11:
6500488-6500370
119
ARFP2_HUMAN
66-105
40
0
-
-
1.4c
ENST00000396777
4c
ENSE00000903318
chr11:
6500189-6499968
222
ARFP2_HUMAN
106-179
74
2
A:23-83
B:23-83
61
61
1.6b
ENST00000396777
6b
ENSE00000903317
chr11:
6499428-6499271
158
ARFP2_HUMAN
180-232
53
2
A:84-136
B:84-136
53
53
1.7
ENST00000396777
7
ENSE00000903316
chr11:
6499122-6498948
175
ARFP2_HUMAN
232-290
59
2
A:136-194
B:136-194
59
59
1.8c
ENST00000396777
8c
ENSE00001864228
chr11:
6498498-6497749
750
ARFP2_HUMAN
291-341
51
2
A:195-223
B:195-223
29
29
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1i49a_ (A:)
1b: SCOP_d1i49b_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
BAR/IMD domain-like
(27)
Superfamily
:
BAR/IMD domain-like
(27)
Family
:
Arfaptin, Rac-binding fragment
(5)
Protein domain
:
Arfaptin, Rac-binding fragment
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1i49a_
A:
1b
d1i49b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1i49A00 (A:23-223)
1b: CATH_1i49B00 (B:23-223)
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Organisms
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(
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Substrate Binding Domain Of Dnak; Chain:A; Domain 2
(103)
Homologous Superfamily
:
Arfaptin, Rac-binding fragment, chain A
(5)
Human (Homo sapiens)
(4)
1a
1i49A00
A:23-223
1b
1i49B00
B:23-223
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (75 KB)
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