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1GY6
Asym. Unit
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Asym.Unit (47 KB)
Biol.Unit 1 (44 KB)
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(1)
Title
:
NTF2 FROM RAT, AMMONIUM SULPHATE CONDITIONS
Authors
:
R. Bayliss, M. Stewart
Date
:
21 Apr 02 (Deposition) - 20 Jun 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Nuclear Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Bayliss, S. Leung, R. Baker, B. Quimby, A. Corbett, M. Stewart
Structural Basis For The Interaction Between Ntf2 And Nucleoporin Fxfg Repeats
Embo J. V. 21 2843 2002
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NTF2_DOMAIN (A:10-121,B:10-121,A:10-121,B:10-12...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NTF2_DOMAIN
PS50177
Nuclear transport factor 2 domain profile.
NTF2_HUMAN
10-121
2
A:10-121
B:10-121
NTF2_MOUSE
10-121
2
A:10-121
B:10-121
NTF2_RAT
10-121
2
A:10-121
B:10-121
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Exons
(4, 8)
Info
All Exons
Exon 1.2 (A:3-33 | B:3-33)
Exon 1.3 (A:34-57 | B:34-57)
Exon 1.4 (A:58-90 | B:58-90)
Exon 1.5 (A:91-127 | B:91-125)
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1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000025608
1
ENSRNOE00000363046
chr19:
35697564-35697596
33
NTF2_RAT
-
0
0
-
-
1.2
ENSRNOT00000025608
2
ENSRNOE00000230100
chr19:
35711999-35712125
127
NTF2_RAT
1-33
33
2
A:3-33
B:3-33
31
31
1.3
ENSRNOT00000025608
3
ENSRNOE00000230088
chr19:
35714265-35714336
72
NTF2_RAT
34-57
24
2
A:34-57
B:34-57
24
24
1.4
ENSRNOT00000025608
4
ENSRNOE00000230084
chr19:
35714421-35714519
99
NTF2_RAT
58-90
33
2
A:58-90
B:58-90
33
33
1.5
ENSRNOT00000025608
5
ENSRNOE00000183551
chr19:
35717241-35718836
1596
NTF2_RAT
91-127
37
2
A:91-127
B:91-125
37
35
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1gy6a_ (A:)
1b: SCOP_d1gy6b_ (B:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Cystatin-like
(403)
Superfamily
:
NTF2-like
(231)
Family
:
NTF2-like
(25)
Protein domain
:
Nuclear transport factor-2 (NTF2)
(14)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(10)
1a
d1gy6a_
A:
1b
d1gy6b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1gy6A00 (A:3-127)
1b: CATH_1gy6B00 (B:3-125)
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)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Nuclear Transport Factor 2; Chain: A,
(517)
Homologous Superfamily
:
[code=3.10.450.50, no name defined]
(113)
Rat (Rattus norvegicus)
(2)
1a
1gy6A00
A:3-127
1b
1gy6B00
B:3-125
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (47 KB)
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