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1GXR
Asym. Unit
Info
Asym.Unit (118 KB)
Biol.Unit 1 (113 KB)
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(1)
Title
:
WD40 REGION OF HUMAN GROUCHO/TLE1
Authors
:
L. H. Pearl, S. M. Roe, L. M. Pickles
Date
:
10 Apr 02 (Deposition) - 13 Jun 02 (Release) - 06 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Transcriptional Co-Repressor, Wd40, Transcription Repressor, Wd Repeat
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. M. Pickles, S. M. Roe, E. J. Hemingway, S. Stifani, L. H. Pearl
Crystal Structure Of The C-Terminal Wd40 Repeat Domain Of The Human Groucho/Tle1 Transcriptional Corepressor
Structure V. 10 751 2002
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
[
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]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:679 , HIS A:697 , HOH A:2247 , HOH A:2249 , HOH A:2264 , HOH A:2267 , HOH A:2268
BINDING SITE FOR RESIDUE CA A1003
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: WD_REPEATS_1 (A:589-603,B:589-603|A:631-645,B:63...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
WD_REPEATS_1
PS00678
Trp-Asp (WD) repeats signature.
TLE1_HUMAN
589-603
631-645
4
A:589-603
B:589-603
A:631-645
B:631-645
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Exons
(7, 14)
Info
All Exons
Exon 1.15 (A:434-444 | B:434-444)
Exon 1.17 (A:444-527 | B:444-527 (gaps))
Exon 1.18a (A:528-610 (gaps) | B:528-610 (gaps...)
Exon 1.19 (A:610-659 | B:610-659)
Exon 1.20 (A:660-710 | B:660-710 (gaps))
Exon 1.21 (A:710-735 | B:710-735)
Exon 1.22b (A:736-770 | B:736-770)
View:
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All Exon Boundaries
1: Boundary 1.14b/1.15
2: Boundary 1.15/1.17
3: Boundary 1.17/1.18a
4: Boundary 1.18a/1.19
5: Boundary 1.19/1.20
6: Boundary 1.20/1.21
7: Boundary 1.21/1.22b
8: Boundary 1.22b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000376499
1a
ENSE00001850808
chr9:
84304220-84303132
1089
TLE1_HUMAN
1-8
8
0
-
-
1.2a
ENST00000376499
2a
ENSE00001761195
chr9:
84302349-84302249
101
TLE1_HUMAN
9-42
34
0
-
-
1.3
ENST00000376499
3
ENSE00001720598
chr9:
84300811-84300748
64
TLE1_HUMAN
42-63
22
0
-
-
1.4
ENST00000376499
4
ENSE00001757684
chr9:
84300635-84300591
45
TLE1_HUMAN
64-78
15
0
-
-
1.5
ENST00000376499
5
ENSE00001766286
chr9:
84268951-84268889
63
TLE1_HUMAN
79-99
21
0
-
-
1.6a
ENST00000376499
6a
ENSE00001627904
chr9:
84267203-84267129
75
TLE1_HUMAN
100-124
25
0
-
-
1.7a
ENST00000376499
7a
ENSE00001763033
chr9:
84249216-84249012
205
TLE1_HUMAN
125-193
69
0
-
-
1.8
ENST00000376499
8
ENSE00001647415
chr9:
84248279-84248263
17
TLE1_HUMAN
193-198
6
0
-
-
1.9b
ENST00000376499
9b
ENSE00002194124
chr9:
84235472-84235356
117
TLE1_HUMAN
199-237
39
0
-
-
1.10
ENST00000376499
10
ENSE00001727081
chr9:
84231614-84231561
54
TLE1_HUMAN
238-255
18
0
-
-
1.11b
ENST00000376499
11b
ENSE00001593094
chr9:
84231049-84230897
153
TLE1_HUMAN
256-306
51
0
-
-
1.12c
ENST00000376499
12c
ENSE00001593668
chr9:
84228436-84228292
145
TLE1_HUMAN
307-355
49
0
-
-
1.14b
ENST00000376499
14b
ENSE00001742393
chr9:
84226874-84226684
191
TLE1_HUMAN
355-418
64
0
-
-
1.15
ENST00000376499
15
ENSE00001691307
chr9:
84225211-84225135
77
TLE1_HUMAN
419-444
26
2
A:434-444
B:434-444
11
11
1.17
ENST00000376499
17
ENSE00001694782
chr9:
84208189-84207940
250
TLE1_HUMAN
444-527
84
2
A:444-527
B:444-527 (gaps)
84
84
1.18a
ENST00000376499
18a
ENSE00001728569
chr9:
84205967-84205720
248
TLE1_HUMAN
528-610
83
2
A:528-610 (gaps)
B:528-610 (gaps)
83
83
1.19
ENST00000376499
19
ENSE00001646911
chr9:
84202743-84202596
148
TLE1_HUMAN
610-659
50
2
A:610-659
B:610-659
50
50
1.20
ENST00000376499
20
ENSE00001607617
chr9:
84200570-84200420
151
TLE1_HUMAN
660-710
51
2
A:660-710
B:660-710 (gaps)
51
51
1.21
ENST00000376499
21
ENSE00001644386
chr9:
84199439-84199363
77
TLE1_HUMAN
710-735
26
2
A:710-735
B:710-735
26
26
1.22b
ENST00000376499
22b
ENSE00001927275
chr9:
84199220-84198598
623
TLE1_HUMAN
736-770
35
2
A:736-770
B:736-770
35
35
[
close EXON info
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1gxra_ (A:)
1b: SCOP_d1gxrb_ (B:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
7-bladed beta-propeller
(245)
Superfamily
:
WD40 repeat-like
(95)
Family
:
WD40-repeat
(53)
Protein domain
:
Groucho/tle1, C-terminal domain
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1gxra_
A:
1b
d1gxrb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1gxrA00 (A:434-770)
1b: CATH_1gxrB00 (B:434-770)
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)
(
)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
7 Propellor
(136)
Topology
:
Methylamine Dehydrogenase; Chain H
(136)
Homologous Superfamily
:
YVTN repeat-like/Quinoprotein amine dehydrogenase
(76)
Human (Homo sapiens)
(7)
1a
1gxrA00
A:434-770
1b
1gxrB00
B:434-770
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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Asym.Unit (118 KB)
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