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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'Site' information from database.
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Getting 'PROSITE' information from database.
1EY2
Biol. Unit 1
Info
Asym.Unit (79 KB)
Biol.Unit 1 (427 KB)
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(1)
Title
:
HUMAN HOMOGENTISATE DIOXYGENASE WITH FE(II)
Authors
:
D. E. Timm, G. P. Titus, M. A. Penalva, H. A. Mueller, S. M. De Cordoba
Date
:
05 May 00 (Deposition) - 05 Nov 00 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (6x)
Keywords
:
Jelly Roll, Beta Sandwich, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. P. Titus, H. A. Mueller, J. Burgner, S. Rodriguez De Cordoba, M. A. Penalva, D. E. Timm
Crystal Structure Of Human Homogentisate Dioxygenase.
Nat. Struct. Biol. V. 7 542 2000
[
close entry info
]
Hetero Components
(2, 60)
Info
All Hetero Components
1a: FE (II) ION (FE2a)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FE2
6
Ligand/Ion
FE (II) ION
2
MSE
54
Mod. Amino Acid
SELENOMETHIONINE
[
close Hetero Component info
]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:335 , GLU A:341 , HIS A:371 , HOH A:2231 , HOH A:2232
BINDING SITE FOR RESIDUE FE2 A 1001
[
close Site info
]
SAPs(SNPs)/Variants
(70, 420)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_073076 (E3A, chain A, )
02: VAR_073077 (E13K, chain A, )
03: VAR_073078 (D18N, chain A, )
04: VAR_009618 (L25P, chain A, )
05: VAR_073079 (Q33R, chain A, )
06: VAR_005272 (E42A, chain A, )
07: VAR_073080 (L44F, chain A, )
08: VAR_073081 (R53Q, chain A, )
09: VAR_005273 (W60G, chain A, )
10: VAR_073082 (L61P, chain A, )
11: VAR_005274 (Y62C, chain A, )
12: VAR_073083 (F73L, chain A, )
13: VAR_049353 (H80H, chain A, )
14: VAR_073084 (P92T, chain A, )
15: VAR_005275 (W97G, chain A, )
16: VAR_073085 (W97R, chain A, )
17: VAR_073086 (G115R, chain A, )
18: VAR_073087 (L116P, chain A, )
19: VAR_073088 (C120F, chain A, )
20: VAR_073089 (C120W, chain A, )
21: VAR_005276 (A122D, chain A, )
22: VAR_073090 (A122V, chain A, )
23: VAR_073091 (G123A, chain A, )
24: VAR_073092 (G123R, chain A, )
25: VAR_073093 (L137P, chain A, )
26: VAR_073094 (G152A, chain A, )
27: VAR_005277 (D153G, chain A, )
28: VAR_073095 (P158L, chain A, )
29: VAR_005278 (G161R, chain A, )
30: VAR_073096 (E168D, chain A, )
31: VAR_009619 (E168K, chain A, )
32: VAR_073097 (F169L, chain A, )
33: VAR_073098 (K171N, chain A, )
34: VAR_073099 (M172T, chain A, )
35: VAR_073100 (E178G, chain A, )
36: VAR_073101 (Q183R, chain A, )
37: VAR_073102 (R187G, chain A, )
38: VAR_005279 (S189I, chain A, )
39: VAR_073103 (R197G, chain A, )
40: VAR_005280 (I216T, chain A, )
41: VAR_073104 (G217W, chain A, )
42: VAR_073105 (N219S, chain A, )
43: VAR_005281 (R225H, chain A, )
44: VAR_073106 (R225L, chain A, )
45: VAR_073107 (R225P, chain A, )
46: VAR_005282 (F227S, chain A, )
47: VAR_005283 (P230S, chain A, )
48: VAR_005284 (P230T, chain A, )
49: VAR_073108 (V245F, chain A, )
50: VAR_073109 (Q258P, chain A, )
51: VAR_073110 (H269R, chain A, )
52: VAR_009620 (G270R, chain A, )
53: VAR_073111 (K276N, chain A, )
54: VAR_005285 (D291E, chain A, )
55: VAR_005286 (V300G, chain A, )
56: VAR_073112 (R321P, chain A, )
57: VAR_073113 (F329C, chain A, )
58: VAR_008744 (R330S, chain A, )
59: VAR_073114 (N337D, chain A, )
60: VAR_073115 (P359L, chain A, )
61: VAR_073116 (G360A, chain A, )
62: VAR_073117 (G360R, chain A, )
63: VAR_073118 (G361R, chain A, )
64: VAR_073119 (G362E, chain A, )
65: VAR_005287 (M368V, chain A, )
66: VAR_073120 (T369N, chain A, )
67: VAR_008745 (H371R, chain A, )
68: VAR_073121 (P373L, chain A, )
69: VAR_073122 (D374H, chain A, )
70: VAR_073123 (E401Q, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_073076
E
3
A
HGD_HUMAN
Disease (AKU)
---
A
E
3
A
02
UniProt
VAR_073077
E
13
K
HGD_HUMAN
Disease (AKU)
---
A
E
13
K
03
UniProt
VAR_073078
D
18
N
HGD_HUMAN
Disease (AKU)
---
A
D
18
N
04
UniProt
VAR_009618
L
25
P
HGD_HUMAN
Disease (AKU)
---
A
L
25
P
05
UniProt
VAR_073079
Q
33
R
HGD_HUMAN
Disease (AKU)
---
A
Q
33
R
06
UniProt
VAR_005272
E
42
A
HGD_HUMAN
Disease (AKU)
---
A
E
42
A
07
UniProt
VAR_073080
L
44
F
HGD_HUMAN
Disease (AKU)
---
A
L
44
F
08
UniProt
VAR_073081
R
53
Q
HGD_HUMAN
Disease (AKU)
---
A
R
53
Q
09
UniProt
VAR_005273
W
60
G
HGD_HUMAN
Disease (AKU)
---
A
W
60
G
10
UniProt
VAR_073082
L
61
P
HGD_HUMAN
Disease (AKU)
---
A
L
61
P
11
UniProt
VAR_005274
Y
62
C
HGD_HUMAN
Disease (AKU)
---
A
Y
62
C
12
UniProt
VAR_073083
F
73
L
HGD_HUMAN
Disease (AKU)
---
A
F
73
L
13
UniProt
VAR_049353
Q
80
H
HGD_HUMAN
Polymorphism
2255543
A
H
80
H
14
UniProt
VAR_073084
P
92
T
HGD_HUMAN
Disease (AKU)
---
A
P
92
T
15
UniProt
VAR_005275
W
97
G
HGD_HUMAN
Disease (AKU)
---
A
W
97
G
16
UniProt
VAR_073085
W
97
R
HGD_HUMAN
Disease (AKU)
---
A
W
97
R
17
UniProt
VAR_073086
G
115
R
HGD_HUMAN
Disease (AKU)
---
A
G
115
R
18
UniProt
VAR_073087
L
116
P
HGD_HUMAN
Disease (AKU)
---
A
L
116
P
19
UniProt
VAR_073088
C
120
F
HGD_HUMAN
Disease (AKU)
---
A
C
120
F
20
UniProt
VAR_073089
C
120
W
HGD_HUMAN
Disease (AKU)
---
A
C
120
W
21
UniProt
VAR_005276
A
122
D
HGD_HUMAN
Disease (AKU)
---
A
A
122
D
22
UniProt
VAR_073090
A
122
V
HGD_HUMAN
Disease (AKU)
---
A
A
122
V
23
UniProt
VAR_073091
G
123
A
HGD_HUMAN
Disease (AKU)
---
A
G
123
A
24
UniProt
VAR_073092
G
123
R
HGD_HUMAN
Disease (AKU)
---
A
G
123
R
25
UniProt
VAR_073093
L
137
P
HGD_HUMAN
Disease (AKU)
---
A
L
137
P
26
UniProt
VAR_073094
G
152
A
HGD_HUMAN
Disease (AKU)
---
A
G
152
A
27
UniProt
VAR_005277
D
153
G
HGD_HUMAN
Disease (AKU)
---
A
D
153
G
28
UniProt
VAR_073095
P
158
L
HGD_HUMAN
Disease (AKU)
---
A
P
158
L
29
UniProt
VAR_005278
G
161
R
HGD_HUMAN
Disease (AKU)
28941783
A
G
161
R
30
UniProt
VAR_073096
E
168
D
HGD_HUMAN
Disease (AKU)
---
A
E
168
D
31
UniProt
VAR_009619
E
168
K
HGD_HUMAN
Disease (AKU)
---
A
E
168
K
32
UniProt
VAR_073097
F
169
L
HGD_HUMAN
Disease (AKU)
---
A
F
169
L
33
UniProt
VAR_073098
K
171
N
HGD_HUMAN
Disease (AKU)
---
A
K
171
N
34
UniProt
VAR_073099
M
172
T
HGD_HUMAN
Polymorphism
---
A
M
172
T
35
UniProt
VAR_073100
E
178
G
HGD_HUMAN
Disease (AKU)
---
A
E
178
G
36
UniProt
VAR_073101
Q
183
R
HGD_HUMAN
Disease (AKU)
---
A
Q
183
R
37
UniProt
VAR_073102
R
187
G
HGD_HUMAN
Disease (AKU)
---
A
R
187
G
38
UniProt
VAR_005279
S
189
I
HGD_HUMAN
Disease (AKU)
---
A
S
189
I
39
UniProt
VAR_073103
R
197
G
HGD_HUMAN
Disease (AKU)
---
A
R
197
G
40
UniProt
VAR_005280
I
216
T
HGD_HUMAN
Disease (AKU)
---
A
I
216
T
41
UniProt
VAR_073104
G
217
W
HGD_HUMAN
Disease (AKU)
---
A
G
217
W
42
UniProt
VAR_073105
N
219
S
HGD_HUMAN
Disease (AKU)
---
A
N
219
S
43
UniProt
VAR_005281
R
225
H
HGD_HUMAN
Disease (AKU)
---
A
R
225
H
44
UniProt
VAR_073106
R
225
L
HGD_HUMAN
Disease (AKU)
---
A
R
225
L
45
UniProt
VAR_073107
R
225
P
HGD_HUMAN
Disease (AKU)
---
A
R
225
P
46
UniProt
VAR_005282
F
227
S
HGD_HUMAN
Disease (AKU)
---
A
F
227
S
47
UniProt
VAR_005283
P
230
S
HGD_HUMAN
Disease (AKU)
28942100
A
P
230
S
48
UniProt
VAR_005284
P
230
T
HGD_HUMAN
Disease (AKU)
---
A
P
230
T
49
UniProt
VAR_073108
V
245
F
HGD_HUMAN
Disease (AKU)
---
A
V
245
F
50
UniProt
VAR_073109
Q
258
P
HGD_HUMAN
Disease (AKU)
---
A
Q
258
P
51
UniProt
VAR_073110
H
269
R
HGD_HUMAN
Disease (AKU)
---
A
H
269
R
52
UniProt
VAR_009620
G
270
R
HGD_HUMAN
Disease (AKU)
---
A
G
270
R
53
UniProt
VAR_073111
K
276
N
HGD_HUMAN
Disease (AKU)
---
A
K
276
N
54
UniProt
VAR_005285
D
291
E
HGD_HUMAN
Disease (AKU)
---
A
D
291
E
55
UniProt
VAR_005286
V
300
G
HGD_HUMAN
Disease (AKU)
---
A
V
300
G
56
UniProt
VAR_073112
R
321
P
HGD_HUMAN
Disease (AKU)
---
A
R
321
P
57
UniProt
VAR_073113
F
329
C
HGD_HUMAN
Disease (AKU)
---
A
F
329
C
58
UniProt
VAR_008744
R
330
S
HGD_HUMAN
Disease (AKU)
---
A
R
330
S
59
UniProt
VAR_073114
N
337
D
HGD_HUMAN
Disease (AKU)
---
A
N
337
D
60
UniProt
VAR_073115
P
359
L
HGD_HUMAN
Disease (AKU)
---
A
P
359
L
61
UniProt
VAR_073116
G
360
A
HGD_HUMAN
Disease (AKU)
---
A
G
360
A
62
UniProt
VAR_073117
G
360
R
HGD_HUMAN
Disease (AKU)
---
A
G
360
R
63
UniProt
VAR_073118
G
361
R
HGD_HUMAN
Disease (AKU)
---
A
G
361
R
64
UniProt
VAR_073119
G
362
E
HGD_HUMAN
Disease (AKU)
---
A
G
362
E
65
UniProt
VAR_005287
M
368
V
HGD_HUMAN
Disease (AKU)
120074173
A
M
368
V
66
UniProt
VAR_073120
T
369
N
HGD_HUMAN
Disease (AKU)
---
A
T
369
N
67
UniProt
VAR_008745
H
371
R
HGD_HUMAN
Disease (AKU)
---
A
H
371
R
68
UniProt
VAR_073121
P
373
L
HGD_HUMAN
Disease (AKU)
---
A
P
373
L
69
UniProt
VAR_073122
D
374
H
HGD_HUMAN
Disease (AKU)
---
A
D
374
H
70
UniProt
VAR_073123
E
401
Q
HGD_HUMAN
Disease (AKU)
---
A
E
401
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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SCOP Domains
(1, 1)
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1a: SCOP_d1ey2a_ (A:)
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All beta proteins
(24004)
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:
Double-stranded beta-helix
(580)
Superfamily
:
RmlC-like cupins
(220)
Family
:
Homogentisate dioxygenase
(2)
Protein domain
:
Homogentisate dioxygenase
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1ey2a_
A:
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