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1DPU
Asym. Unit
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Asym.Unit (674 KB)
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Models
(30 )
Title
:
SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN RPA32 COMPLEXED WITH UNG2(73-88)
Authors
:
G. Mer, A. M. Edwards, W. J. Chazin
Date
:
27 Dec 99 (Deposition) - 10 Nov 00 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (30 x)
Keywords
:
Protein-Peptide Complex, Dna Repair, Nmr, Dna Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Mer, A. Bochkarev, R. Gupta, E. Bochkareva, L. Frappier, C. J. Ingles, A. M. Edwards, W. J. Chazin
Structural Basis For The Recognition Of Dna Repair Proteins Ung2, Xpa, And Rad52 By Replication Factor Rpa.
Cell(Cambridge, Mass. ) V. 103 449 2000
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_023302 (N203S, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_023302
N
203
S
RFA2_HUMAN
Polymorphism
28904899
A
N
203
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.2c (B:73-88)
Exon 2.6 (A:202-211)
Exon 2.7 (A:212-243)
Exon 2.8d (A:243-270)
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All Exon Boundaries
1: Boundary 1.1/1.2c
2: Boundary 1.2c/1.3
3: Boundary 2.5a/2.6
4: Boundary 2.6/2.7
5: Boundary 2.7/2.8d
6: Boundary 2.8d/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000242576
1
ENSE00001130047
chr12:
109535415-109535616
202
UNG_HUMAN
1-44
44
0
-
-
1.2c
ENST00000242576
2c
ENSE00001130067
chr12:
109536237-109536443
207
UNG_HUMAN
45-113
69
1
B:73-88
16
1.3
ENST00000242576
3
ENSE00000754701
chr12:
109536994-109537089
96
UNG_HUMAN
114-145
32
0
-
-
1.4
ENST00000242576
4
ENSE00000754703
chr12:
109539707-109539804
98
UNG_HUMAN
146-178
33
0
-
-
1.5
ENST00000242576
5
ENSE00000754705
chr12:
109540644-109540732
89
UNG_HUMAN
178-208
31
0
-
-
1.6
ENST00000242576
6
ENSE00000834681
chr12:
109541238-109541416
179
UNG_HUMAN
208-267
60
0
-
-
1.7
ENST00000242576
7
ENSE00001130061
chr12:
109547634-109548798
1165
UNG_HUMAN
268-313
46
0
-
-
2.1b
ENST00000373912
1b
ENSE00001461906
chr1:
28241254-28240945
310
RFA2_HUMAN
1-4
4
0
-
-
2.1e
ENST00000373912
1e
ENSE00001065438
chr1:
28240680-28240574
107
RFA2_HUMAN
4-39
36
0
-
-
2.2
ENST00000373912
2
ENSE00000956216
chr1:
28233793-28233692
102
RFA2_HUMAN
40-73
34
0
-
-
2.3
ENST00000373912
3
ENSE00000956217
chr1:
28233552-28233439
114
RFA2_HUMAN
74-111
38
0
-
-
2.4
ENST00000373912
4
ENSE00000761795
chr1:
28224218-28224144
75
RFA2_HUMAN
112-136
25
0
-
-
2.5a
ENST00000373912
5a
ENSE00002168322
chr1:
28223632-28223516
117
RFA2_HUMAN
137-175
39
0
-
-
2.6
ENST00000373912
6
ENSE00000761799
chr1:
28220908-28220801
108
RFA2_HUMAN
176-211
36
1
A:202-211
10
2.7
ENST00000373912
7
ENSE00000761801
chr1:
28220617-28220523
95
RFA2_HUMAN
212-243
32
1
A:212-243
32
2.8d
ENST00000373912
8d
ENSE00001461899
chr1:
28218758-28218035
724
RFA2_HUMAN
243-270
28
1
A:243-270
28
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1dpua_ (A:)
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
C-terminal domain of RPA32
(2)
Protein domain
:
C-terminal domain of RPA32
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1dpua_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1dpuA00 (A:202-270)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Human (Homo sapiens)
(70)
1a
1dpuA00
A:202-270
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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