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1D06
Biol. Unit 1
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Asym.Unit (28 KB)
Biol.Unit 1 (24 KB)
Biol.Unit 2 (47 KB)
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(1)
Title
:
STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION
Authors
:
H. Miyatake, M. Mukai, S. -Y. Park, S. Adachi, K. Tamura, H. Nakamura, K. T. Tsuchiya, T. Iizuka, Y. Shiro
Date
:
09 Sep 99 (Deposition) - 15 Mar 00 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Oxygen Sensor, Histidine Kinase, Pas, High-Resolution, Two-Component System, Signaling Protein
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Gene Ontology, PubMed, Web (Google)
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Reference
:
H. Miyatake, M. Mukai, S. -Y. Park, S. Adachi, K. Tamura, H. Nakamura, K. Nakamura, T. Tsuchiya, T. Iizuka, Y. Shiro
Sensory Mechanism Of Oxygen Sensor Fixl From Rhizobium Meliloti: Crystallographic, Mutagenesis And Resonance Raman Spectroscopic Studies
J. Mol. Biol. V. 301 415 2000
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Hetero Components
(1, 1)
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All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
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No.
Name
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Type
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1
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
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Evidence
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Description
1
AC1
SOFTWARE
HOH A:11 , HOH A:34 , HOH A:56 , VAL A:151 , LEU A:182 , LEU A:185 , MET A:186 , TYR A:190 , HIS A:194 , TYR A:197 , LEU A:198 , TYR A:201 , LYS A:207 , ARG A:208 , ILE A:209 , ILE A:210 , ARG A:214 , VAL A:216 , SER A:217 , MET A:228 , LEU A:230 , VAL A:232 , PHE A:243 , GLY A:245
BINDING SITE FOR RESIDUE HEM A 501
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 2)
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1: PAS (A:135-205)
2: PAC (A:203-251)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PAS
PS50112
PAS repeat profile.
FIXL_RHIME
135-205
1
A:135-205
2
PAC
PS50113
PAC domain profile.
FIXL_RHIME
203-262
1
A:203-251
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Exons
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SCOP Domains
(1, 1)
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1a: SCOP_d1d06a_ (A:)
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Protein Domains
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Organisms
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Profilin-like
(304)
Superfamily
:
PYP-like sensor domain (PAS domain)
(163)
Family
:
Heme-binding PAS domain
(26)
Protein domain
:
Histidine kinase FixL heme domain
(20)
Rhizobium meliloti [TaxId: 382]
(2)
1a
d1d06a_
A:
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CATH Domains
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1a: CATH_1d06A00 (A:122-251)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Beta-Lactamase
(202)
Homologous Superfamily
:
[code=3.30.450.20, no name defined]
(117)
Sinorhizobium meliloti. Organism_taxid: 382.
(2)
1a
1d06A00
A:122-251
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (28 KB)
Header - Asym.Unit
Biol.Unit 1 (24 KB)
Header - Biol.Unit 1
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