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1BVP
Asym. Unit
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Asym.Unit (331 KB)
Biol.Unit 1 (166 KB)
Biol.Unit 2 (166 KB)
Biol.Unit 3 (328 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF BLUETONGUE VIRUS VP7
Authors
:
D. Stuart, J. Grimes
Date
:
17 Feb 95 (Deposition) - 03 Jun 95 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : 1,2,3,4,5,6
Biol. Unit 1: 1,2,3 (1x)
Biol. Unit 2: 4,5,6 (1x)
Biol. Unit 3: 1,2,3,4,5,6 (1x)
Keywords
:
Virus, Vp7, Trimer, Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Grimes, A. K. Basak, P. Roy, D. Stuart
The Crystal Structure Of Bluetongue Virus Vp7.
Nature V. 373 167 1995
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1bvp11 (1:1-120,1:255-349)
1b: SCOP_d1bvp21 (2:1-120,2:255-349)
1c: SCOP_d1bvp31 (3:1-120,3:255-349)
1d: SCOP_d1bvp41 (4:1-120,4:255-349)
1e: SCOP_d1bvp51 (5:1-120,5:255-349)
1f: SCOP_d1bvp61 (6:1-120,6:255-349)
2a: SCOP_d1bvp12 (1:121-254)
2b: SCOP_d1bvp22 (2:121-254)
2c: SCOP_d1bvp32 (3:121-254)
2d: SCOP_d1bvp42 (4:121-254)
2e: SCOP_d1bvp52 (5:121-254)
2f: SCOP_d1bvp62 (6:121-254)
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)
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)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
A virus capsid protein alpha-helical domain
(4)
Superfamily
:
A virus capsid protein alpha-helical domain
(4)
Family
:
Orbivirus capsid
(2)
Protein domain
:
BTV vp7
(2)
Bluetongue virus [TaxId: 40051]
(2)
1a
d1bvp11
1:1-120,1:255-349
1b
d1bvp21
2:1-120,2:255-349
1c
d1bvp31
3:1-120,3:255-349
1d
d1bvp41
4:1-120,4:255-349
1e
d1bvp51
5:1-120,5:255-349
1f
d1bvp61
6:1-120,6:255-349
Class
:
All beta proteins
(24004)
Fold
:
Viral protein domain
(195)
Superfamily
:
Viral protein domain
(195)
Family
:
Top domain of virus capsid protein
(5)
Protein domain
:
BTV vp7, central (top) domain
(2)
Bluetongue virus [TaxId: 40051]
(2)
2a
d1bvp12
1:121-254
2b
d1bvp22
2:121-254
2c
d1bvp32
3:121-254
2d
d1bvp42
4:121-254
2e
d1bvp52
5:121-254
2f
d1bvp62
6:121-254
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CATH Domains
(3, 18)
Info
all CATH domains
1a: CATH_1bvp101 (1:1-120)
1b: CATH_1bvp201 (2:1-120)
1c: CATH_1bvp301 (3:1-120)
1d: CATH_1bvp401 (4:1-120)
1e: CATH_1bvp501 (5:1-120)
1f: CATH_1bvp601 (6:1-120)
2a: CATH_1bvp103 (1:254-349)
2b: CATH_1bvp203 (2:254-349)
2c: CATH_1bvp303 (3:254-349)
2d: CATH_1bvp403 (4:254-349)
2e: CATH_1bvp503 (5:254-349)
2f: CATH_1bvp603 (6:254-349)
3a: CATH_1bvp102 (1:121-253)
3b: CATH_1bvp202 (2:121-253)
3c: CATH_1bvp302 (3:121-253)
3d: CATH_1bvp402 (4:121-253)
3e: CATH_1bvp502 (5:121-253)
3f: CATH_1bvp602 (6:121-253)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Bluetongue Virus 10, subunit 1; domain 1
(2)
Homologous Superfamily
:
Bluetongue Virus 10, subunit 1, domain 1
(2)
Bluetongue virus (serotype 10 / american isolate). Organism_taxid: 10900. Strain: (serotype 10 / american isolate)
(1)
1a
1bvp101
1:1-120
1b
1bvp201
2:1-120
1c
1bvp301
3:1-120
1d
1bvp401
4:1-120
1e
1bvp501
5:1-120
1f
1bvp601
6:1-120
Topology
:
Bluetongue Virus 10, subunit 1; domain 3
(2)
Homologous Superfamily
:
Bluetongue Virus 10, subunit 1, domain 3
(2)
Bluetongue virus (serotype 10 / american isolate). Organism_taxid: 10900. Strain: (serotype 10 / american isolate)
(1)
2a
1bvp103
1:254-349
2b
1bvp203
2:254-349
2c
1bvp303
3:254-349
2d
1bvp403
4:254-349
2e
1bvp503
5:254-349
2f
1bvp603
6:254-349
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.170, no name defined]
(7)
Bluetongue virus (serotype 10 / american isolate). Organism_taxid: 10900. Strain: (serotype 10 / american isolate)
(1)
3a
1bvp102
1:121-253
3b
1bvp202
2:121-253
3c
1bvp302
3:121-253
3d
1bvp402
4:121-253
3e
1bvp502
5:121-253
3f
1bvp602
6:121-253
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Asym.Unit (331 KB)
Header - Asym.Unit
Biol.Unit 1 (166 KB)
Header - Biol.Unit 1
Biol.Unit 2 (166 KB)
Header - Biol.Unit 2
Biol.Unit 3 (328 KB)
Header - Biol.Unit 3
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