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1BFO
Biol. Unit 2
Info
Asym.Unit (285 KB)
Biol.Unit 1 (74 KB)
Biol.Unit 2 (74 KB)
Biol.Unit 3 (74 KB)
Biol.Unit 4 (74 KB)
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(1)
Title
:
CAMPATH-1G IGG2B RAT MONOCLONAL FAB
Authors
:
G. M. T. Cheetham, G. Hale, H. Waldmann, A. C. Bloomer
Date
:
20 May 98 (Deposition) - 16 Mar 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Antibody, Fab, Campath-1G, Cd52
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. M. Cheetham, G. Hale, H. Waldmann, A. C. Bloomer
Crystal Structures Of A Rat Anti-Cd52 (Campath-1) Therapeutic Antibody Fab Fragment And Its Humanized Counterpart.
J. Mol. Biol. V. 284 85 1998
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: IG_MHC (C:191-197)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IG_MHC
PS00290
Immunoglobulins and major histocompatibility complex proteins signature.
KACB_RAT
84-90
1
-
C:191-197
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(4, 16)
Info
All SCOP Domains
1a: SCOP_d1bfob2 (B:122-216)
1b: SCOP_d1bfod2 (D:122-216)
1c: SCOP_d1bfof2 (F:122-216)
1d: SCOP_d1bfoh2 (H:122-216)
2a: SCOP_d1bfoa2 (A:108-214)
2b: SCOP_d1bfoc2 (C:108-214)
2c: SCOP_d1bfoe2 (E:108-214)
2d: SCOP_d1bfog2 (G:108-214)
3a: SCOP_d1bfob1 (B:1-121)
3b: SCOP_d1bfod1 (D:1-121)
3c: SCOP_d1bfof1 (F:1-121)
3d: SCOP_d1bfoh1 (H:1-121)
4a: SCOP_d1bfoa1 (A:1-107)
4b: SCOP_d1bfoc1 (C:1-107)
4c: SCOP_d1bfoe1 (E:1-107)
4d: SCOP_d1bfog1 (G:1-107)
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Protein Domains
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Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
(608)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(5)
1a
d1bfob2
B:122-216
1b
d1bfod2
D:122-216
1c
d1bfof2
F:122-216
1d
d1bfoh2
H:122-216
Protein domain
:
Immunoglobulin light chain kappa constant domain, CL-kappa
(495)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(5)
2a
d1bfoa2
A:108-214
2b
d1bfoc2
C:108-214
2c
d1bfoe2
E:108-214
2d
d1bfog2
G:108-214
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
Immunoglobulin heavy chain variable domain, VH
(658)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(16)
3a
d1bfob1
B:1-121
3b
d1bfod1
D:1-121
3c
d1bfof1
F:1-121
3d
d1bfoh1
H:1-121
Protein domain
:
Immunoglobulin light chain kappa variable domain, VL-kappa
(616)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(9)
4a
d1bfoa1
A:1-107
4b
d1bfoc1
C:1-107
4c
d1bfoe1
E:1-107
4d
d1bfog1
G:1-107
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CATH Domains
(1, 16)
Info
all CATH domains
1a: CATH_1bfoA02 (A:109-211)
1b: CATH_1bfoC02 (C:109-211)
1c: CATH_1bfoF02 (F:122-216)
1d: CATH_1bfoH02 (H:122-216)
1e: CATH_1bfoB01 (B:1-121)
1f: CATH_1bfoD01 (D:1-121)
1g: CATH_1bfoF01 (F:1-121)
1h: CATH_1bfoH01 (H:1-121)
1i: CATH_1bfoG02 (G:109-211)
1j: CATH_1bfoE02 (E:109-210)
1k: CATH_1bfoA01 (A:1-108)
1l: CATH_1bfoC01 (C:1-108)
1m: CATH_1bfoE01 (E:1-108)
1n: CATH_1bfoG01 (G:1-108)
1o: CATH_1bfoB02 (B:122-216)
1p: CATH_1bfoD02 (D:122-216)
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)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Black rat (Rattus rattus)
(2)
1a
1bfoA02
A:109-211
1b
1bfoC02
C:109-211
1c
1bfoF02
F:122-216
1d
1bfoH02
H:122-216
1e
1bfoB01
B:1-121
1f
1bfoD01
D:1-121
1g
1bfoF01
F:1-121
1h
1bfoH01
H:1-121
1i
1bfoG02
G:109-211
1j
1bfoE02
E:109-210
1k
1bfoA01
A:1-108
1l
1bfoC01
C:1-108
1m
1bfoE01
E:1-108
1n
1bfoG01
G:1-108
1o
1bfoB02
B:122-216
1p
1bfoD02
D:122-216
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (285 KB)
Header - Asym.Unit
Biol.Unit 1 (74 KB)
Header - Biol.Unit 1
Biol.Unit 2 (74 KB)
Header - Biol.Unit 2
Biol.Unit 3 (74 KB)
Header - Biol.Unit 3
Biol.Unit 4 (74 KB)
Header - Biol.Unit 4
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