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1AVC
Asym. Unit
Info
Asym.Unit (111 KB)
Biol.Unit 1 (106 KB)
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(1)
Title
:
BOVINE ANNEXIN VI (CALCIUM-BOUND)
Authors
:
A. J. Avila-Sakar, C. E. Creutz, R. H. Kretsinger
Date
:
16 Sep 97 (Deposition) - 28 Jan 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Annexin, Calcium-Binding, Membrane-Binding, Calcium/Phospholipid-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. J. Avila-Sakar, C. E. Creutz, R. H. Kretsinger
Crystal Structure Of Bovine Annexin Vi In A Calcium-Bound State.
Biochim. Biophys. Acta V. 1387 103 1998
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
6
Ligand/Ion
CALCIUM ION
[
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
MET A:376 , GLY A:378 , LEU A:379 , GLY A:380 , THR A:381 , GLU A:420
BINDING SITE FOR RESIDUE CA A 674
2
AC2
SOFTWARE
LYS A:75 , LEU A:78 , THR A:79 , GLU A:83
BINDING SITE FOR RESIDUE CA A 675
3
AC3
SOFTWARE
MET A:264 , GLY A:266 , LEU A:267 , GLY A:268 , THR A:269 , ASP A:308
BINDING SITE FOR RESIDUE CA A 676
4
AC4
SOFTWARE
GLY A:188 , GLU A:189 , LYS A:191 , GLY A:193 , THR A:194 , SER A:229 , GLU A:233
BINDING SITE FOR RESIDUE CA A 677
5
AC5
SOFTWARE
MET A:612 , GLY A:614 , ALA A:615 , GLY A:616 , THR A:617 , ASP A:656
BINDING SITE FOR RESIDUE CA A 678
6
AC6
SOFTWARE
MET A:448 , GLU A:449 , GLY A:450 , GLY A:452 , ASP A:492
BINDING SITE FOR RESIDUE CA A 679
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 7)
Info
All PROSITE Patterns/Profiles
1: ANNEXIN (A:37-89|A:109-161|A:193-245|A:268-...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANNEXIN
PS00223
Annexins repeated domain signature.
ANXA6_BOVIN
37-89
109-161
193-245
268-320
380-432
452-504
616-668
7
A:37-89
A:109-161
A:193-245
A:268-320
A:380-432
A:452-504
A:616-668
[
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Exons
(24, 24)
Info
All Exons
Exon 1.3b (A:10-37)
Exon 1.4 (A:37-68)
Exon 1.5 (A:69-106)
Exon 1.6 (A:107-137)
Exon 1.7 (A:137-163)
Exon 1.8 (A:164-182)
Exon 1.9 (A:183-214)
Exon 1.10 (A:214-246)
Exon 1.11 (A:246-265)
Exon 1.12 (A:266-306)
Exon 1.13 (A:307-323)
Exon 1.14a (A:330-352)
Exon 1.15 (A:353-380)
Exon 1.16 (A:380-411)
Exon 1.17 (A:412-449)
Exon 1.18 (A:450-480)
Exon 1.19 (A:480-506)
Exon 1.20 (A:507-524)
Exon 1.21 (A:525-530)
Exon 1.22 (A:545-562)
Exon 1.23b (A:562-594)
Exon 1.24 (A:594-613)
Exon 1.25 (A:614-654)
Exon 1.26 (A:655-671)
View:
Select:
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All Exon Boundaries
01: Boundary 1.2/1.3b
02: Boundary 1.3b/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6
05: Boundary 1.6/1.7
06: Boundary 1.7/1.8
07: Boundary 1.8/1.9
08: Boundary 1.9/1.10
09: Boundary 1.10/1.11
10: Boundary 1.11/1.12
11: Boundary 1.12/1.13
12: Boundary 1.13/1.14a
13: Boundary 1.14a/1.15
14: Boundary 1.15/1.16
15: Boundary 1.16/1.17
16: Boundary 1.17/1.18
17: Boundary 1.18/1.19
18: Boundary 1.19/1.20
19: Boundary 1.20/1.21
20: Boundary 1.21/1.22
21: Boundary 1.22/1.23b
22: Boundary 1.23b/1.24
23: Boundary 1.24/1.25
24: Boundary 1.25/1.26
25: Boundary 1.26/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000019719
1
ENSBTAE00000401151
chr7:
62025853-62025783
71
ANXA6_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000019719
2
ENSBTAE00000430703
chr7:
62013353-62013310
44
ANXA6_BOVIN
1-6
6
0
-
-
1.3b
ENSBTAT00000019719
3b
ENSBTAE00000316023
chr7:
62008435-62008345
91
ANXA6_BOVIN
7-37
31
1
A:10-37
28
1.4
ENSBTAT00000019719
4
ENSBTAE00000316022
chr7:
62007342-62007248
95
ANXA6_BOVIN
37-68
32
1
A:37-68
32
1.5
ENSBTAT00000019719
5
ENSBTAE00000160493
chr7:
62006752-62006639
114
ANXA6_BOVIN
69-106
38
1
A:69-106
38
1.6
ENSBTAT00000019719
6
ENSBTAE00000160494
chr7:
62005668-62005578
91
ANXA6_BOVIN
107-137
31
1
A:107-137
31
1.7
ENSBTAT00000019719
7
ENSBTAE00000160495
chr7:
62004654-62004575
80
ANXA6_BOVIN
137-163
27
1
A:137-163
27
1.8
ENSBTAT00000019719
8
ENSBTAE00000160496
chr7:
62003507-62003451
57
ANXA6_BOVIN
164-182
19
1
A:164-182
19
1.9
ENSBTAT00000019719
9
ENSBTAE00000160497
chr7:
62002657-62002564
94
ANXA6_BOVIN
183-214
32
1
A:183-214
32
1.10
ENSBTAT00000019719
10
ENSBTAE00000160498
chr7:
62002140-62002045
96
ANXA6_BOVIN
214-246
33
1
A:214-246
33
1.11
ENSBTAT00000019719
11
ENSBTAE00000160499
chr7:
62000795-62000737
59
ANXA6_BOVIN
246-265
20
1
A:246-265
20
1.12
ENSBTAT00000019719
12
ENSBTAE00000160500
chr7:
61999781-61999659
123
ANXA6_BOVIN
266-306
41
1
A:266-306
41
1.13
ENSBTAT00000019719
13
ENSBTAE00000160502
chr7:
61998367-61998309
59
ANXA6_BOVIN
307-326
20
1
A:307-323
17
1.14a
ENSBTAT00000019719
14a
ENSBTAE00000160505
chr7:
61996987-61996909
79
ANXA6_BOVIN
326-352
27
1
A:330-352
23
1.15
ENSBTAT00000019719
15
ENSBTAE00000409543
chr7:
61995219-61995138
82
ANXA6_BOVIN
353-380
28
1
A:353-380
28
1.16
ENSBTAT00000019719
16
ENSBTAE00000391455
chr7:
61994550-61994456
95
ANXA6_BOVIN
380-411
32
1
A:380-411
32
1.17
ENSBTAT00000019719
17
ENSBTAE00000406450
chr7:
61993980-61993867
114
ANXA6_BOVIN
412-449
38
1
A:412-449
38
1.18
ENSBTAT00000019719
18
ENSBTAE00000428522
chr7:
61992420-61992330
91
ANXA6_BOVIN
450-480
31
1
A:450-480
31
1.19
ENSBTAT00000019719
19
ENSBTAE00000429988
chr7:
61991549-61991470
80
ANXA6_BOVIN
480-506
27
1
A:480-506
27
1.20
ENSBTAT00000019719
20
ENSBTAE00000390554
chr7:
61990680-61990627
54
ANXA6_BOVIN
507-524
18
1
A:507-524
18
1.21
ENSBTAT00000019719
21
ENSBTAE00000385355
chr7:
61986093-61986076
18
ANXA6_BOVIN
525-530
6
1
A:525-530
6
1.22
ENSBTAT00000019719
22
ENSBTAE00000407100
chr7:
61985197-61985104
94
ANXA6_BOVIN
531-562
32
1
A:545-562
18
1.23b
ENSBTAT00000019719
23b
ENSBTAE00000395039
chr7:
61983954-61983859
96
ANXA6_BOVIN
562-594
33
1
A:562-594
33
1.24
ENSBTAT00000019719
24
ENSBTAE00000427065
chr7:
61981195-61981137
59
ANXA6_BOVIN
594-613
20
1
A:594-613
20
1.25
ENSBTAT00000019719
25
ENSBTAE00000424151
chr7:
61979805-61979683
123
ANXA6_BOVIN
614-654
41
1
A:614-654
41
1.26
ENSBTAT00000019719
26
ENSBTAE00000422323
chr7:
61976868-61976448
421
ANXA6_BOVIN
655-673
19
1
A:655-671
17
[
close EXON info
]
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1avca1 (A:10-350)
1b: SCOP_d1avca2 (A:351-671)
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Folds
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(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Annexin
(61)
Superfamily
:
Annexin
(61)
Family
:
Annexin
(56)
Protein domain
:
Annexin VI
(2)
Cow (Bos taurus) [TaxId: 9913]
(2)
1a
d1avca1
A:10-350
1b
d1avca2
A:351-671
[
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1avcA02 (A:91-168)
1b: CATH_1avcA04 (A:252-323)
1c: CATH_1avcA08 (A:600-671)
1d: CATH_1avcA06 (A:437-510)
1e: CATH_1avcA03 (A:169-251)
1f: CATH_1avcA07 (A:511-599)
1g: CATH_1avcA05 (A:363-436)
1h: CATH_1avcA01 (A:11-90)
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Architectures
(
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(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Annexin V; domain 1
(80)
Homologous Superfamily
:
[code=1.10.220.10, no name defined]
(58)
Cattle (Bos taurus)
(4)
1a
1avcA02
A:91-168
1b
1avcA04
A:252-323
1c
1avcA08
A:600-671
1d
1avcA06
A:437-510
1e
1avcA03
A:169-251
1f
1avcA07
A:511-599
1g
1avcA05
A:363-436
1h
1avcA01
A:11-90
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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