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1AUS
Asym. Unit
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Asym.Unit (367 KB)
Biol.Unit 1 (718 KB)
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(1)
Title
:
ACTIVATED UNLIGANDED SPINACH RUBISCO
Authors
:
T. C. Taylor, I. Andersson
Date
:
21 Jun 95 (Deposition) - 15 Oct 95 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : L,M,N,O,S,T,U,V
Biol. Unit 1: L,M,N,O,S,T,U,V (2x)
Keywords
:
Lyase (Carbon-Carbon)
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. C. Taylor, I. Andersson
Structure Of A Product Complex Of Spinach Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase.
Biochemistry V. 36 4041 1997
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: FORMIC ACID (FMTa)
1b: FORMIC ACID (FMTb)
1c: FORMIC ACID (FMTc)
1d: FORMIC ACID (FMTd)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
FMT
4
Ligand/Ion
FORMIC ACID
2
MG
4
Ligand/Ion
MAGNESIUM ION
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (UNKNOWN)
03: AC3 (UNKNOWN)
04: AC4 (UNKNOWN)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: ACT (AUTHOR)
11: AD1 (SOFTWARE)
12: AD2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP L:203 , GLU L:204 , FMT L:477 , HOH L:570 , HOH L:588 , HOH L:623
BINDING SITE FOR RESIDUE MG L 476
02
AC2
UNKNOWN
LYS L:201 , ASP L:203 , GLU L:204 , MG M:476
NULL
03
AC3
UNKNOWN
LYS L:201 , ASP L:203 , GLU L:204 , MG N:476
NULL
04
AC4
UNKNOWN
LYS L:201 , ASP L:203 , GLU L:204 , MG O:476
NULL
05
AC5
SOFTWARE
ASP M:203 , GLU M:204 , FMT M:477
BINDING SITE FOR RESIDUE MG M 476
06
AC6
SOFTWARE
ASP N:203 , GLU N:204 , FMT N:477
BINDING SITE FOR RESIDUE MG N 476
07
AC7
SOFTWARE
ASP O:203 , GLU O:204 , FMT O:477
BINDING SITE FOR RESIDUE MG O 476
08
AC8
SOFTWARE
THR L:173 , LYS L:201 , ASP L:203 , GLU L:204 , HIS L:294 , HIS L:327 , MG L:476 , HOH L:588 , HOH L:653
BINDING SITE FOR RESIDUE FMT L 477
09
AC9
SOFTWARE
THR M:173 , LYS M:201 , ASP M:203 , GLU M:204 , HIS M:294 , HIS M:327 , MG M:476
BINDING SITE FOR RESIDUE FMT M 477
10
ACT
AUTHOR
LYS L:201 , ASP L:203 , GLU L:204 , MG L:476
CATALYTIC RESIDUES
11
AD1
SOFTWARE
THR N:173 , LYS N:201 , ASP N:203 , GLU N:204 , HIS N:294 , HIS N:327 , MG N:476
BINDING SITE FOR RESIDUE FMT N 477
12
AD2
SOFTWARE
THR O:173 , LYS O:201 , ASP O:203 , GLU O:204 , HIS O:294 , HIS O:327 , MG O:476
BINDING SITE FOR RESIDUE FMT O 477
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: RUBISCO_LARGE (L:196-204,M:196-204,N:196-204,O:19...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RUBISCO_LARGE
PS00157
Ribulose bisphosphate carboxylase large chain active site.
RBL_SPIOL
196-204
4
L:196-204
M:196-204
N:196-204
O:196-204
[
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 12)
Info
All SCOP Domains
1a: SCOP_d1ausl2 (L:20-147)
1b: SCOP_d1ausm2 (M:20-147)
1c: SCOP_d1ausn2 (N:20-147)
1d: SCOP_d1auso2 (O:20-147)
2a: SCOP_d1auss_ (S:)
2b: SCOP_d1aust_ (T:)
2c: SCOP_d1ausu_ (U:)
2d: SCOP_d1ausv_ (V:)
3a: SCOP_d1ausl1 (L:148-463)
3b: SCOP_d1ausm1 (M:148-463)
3c: SCOP_d1ausn1 (N:148-463)
3d: SCOP_d1auso1 (O:148-463)
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(
)
(
)
Folds
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)
(
)
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(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
RuBisCO, large subunit, small (N-terminal) domain
(66)
Family
:
Ribulose 1,5-bisphosphate carboxylase-oxygenase
(39)
Protein domain
:
Ribulose 1,5-bisphosphate carboxylase-oxygenase
(39)
Spinach (Spinacia oleracea) [TaxId: 3562]
(10)
1a
d1ausl2
L:20-147
1b
d1ausm2
M:20-147
1c
d1ausn2
N:20-147
1d
d1auso2
O:20-147
Fold
:
RuBisCO, small subunit
(44)
Superfamily
:
RuBisCO, small subunit
(44)
Family
:
RuBisCO, small subunit
(44)
Protein domain
:
Ribulose 1,5-bisphosphate carboxylase-oxygenase
(28)
Spinach (Spinacia oleracea) [TaxId: 3562]
(10)
2a
d1auss_
S:
2b
d1aust_
T:
2c
d1ausu_
U:
2d
d1ausv_
V:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
RuBisCo, C-terminal domain
(66)
Family
:
RuBisCo, large subunit, C-terminal domain
(56)
Protein domain
:
Ribulose 1,5-bisphosphate carboxylase-oxygenase
(40)
Spinach (Spinacia oleracea) [TaxId: 3562]
(10)
3a
d1ausl1
L:148-463
3b
d1ausm1
M:148-463
3c
d1ausn1
N:148-463
3d
d1auso1
O:148-463
[
close SCOP info
]
CATH Domains
(3, 12)
Info
all CATH domains
1a: CATH_1ausL01 (L:22-148)
1b: CATH_1ausM01 (M:22-148)
1c: CATH_1ausN01 (N:22-148)
1d: CATH_1ausO01 (O:22-148)
2a: CATH_1ausS00 (S:1-123)
2b: CATH_1ausU00 (U:1-123)
2c: CATH_1ausV00 (V:1-123)
2d: CATH_1ausT00 (T:1-123)
3a: CATH_1ausL02 (L:149-462)
3b: CATH_1ausN02 (N:149-462)
3c: CATH_1ausO02 (O:149-462)
3d: CATH_1ausM02 (M:149-462)
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.150, no name defined]
(49)
Spinach (Spinacia oleracea)
(10)
1a
1ausL01
L:22-148
1b
1ausM01
M:22-148
1c
1ausN01
N:22-148
1d
1ausO01
O:22-148
Topology
:
Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase
(42)
Homologous Superfamily
:
[code=3.30.190.10, no name defined]
(35)
Spinach (Spinacia oleracea)
(10)
2a
1ausS00
S:1-123
2b
1ausU00
U:1-123
2c
1ausV00
V:1-123
2d
1ausT00
T:1-123
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Rubisco
(49)
Spinach (Spinacia oleracea)
(10)
3a
1ausL02
L:149-462
3b
1ausN02
N:149-462
3c
1ausO02
O:149-462
3d
1ausM02
M:149-462
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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