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(-) Description

Title :  ACTIVATED UNLIGANDED SPINACH RUBISCO
 
Authors :  T. C. Taylor, I. Andersson
Date :  21 Jun 95  (Deposition) - 15 Oct 95  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  L,M,N,O,S,T,U,V
Biol. Unit 1:  L,M,N,O,S,T,U,V  (2x)
Keywords :  Lyase (Carbon-Carbon) (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. C. Taylor, I. Andersson
Structure Of A Product Complex Of Spinach Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase.
Biochemistry V. 36 4041 1997
PubMed-ID: 9092835  |  Reference-DOI: 10.1021/BI962818W
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
    Chains: L, M, N, O
    EC Number: 4.1.1.39
    Organ: LEAF
    Organism Common: SPINACH
    Organism Scientific: SPINACIA OLERACEA
    Organism Taxid: 3562
    Synonym: RUBISCO
 
Molecule 2 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
    Chains: S, T, U, V
    EC Number: 4.1.1.39
    Organ: LEAF
    Organism Common: SPINACH
    Organism Scientific: SPINACIA OLERACEA
    Organism Taxid: 3562
    Synonym: RUBISCO

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : LMNOSTUV
Biological Unit 1 (2x): LMNOSTUV

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1FMT4Ligand/IonFORMIC ACID
2MG4Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1FMT8Ligand/IonFORMIC ACID
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP L:203 , GLU L:204 , FMT L:477 , HOH L:570 , HOH L:588 , HOH L:623BINDING SITE FOR RESIDUE MG L 476
02AC2UNKNOWNLYS L:201 , ASP L:203 , GLU L:204 , MG M:476NULL
03AC3UNKNOWNLYS L:201 , ASP L:203 , GLU L:204 , MG N:476NULL
04AC4UNKNOWNLYS L:201 , ASP L:203 , GLU L:204 , MG O:476NULL
05AC5SOFTWAREASP M:203 , GLU M:204 , FMT M:477BINDING SITE FOR RESIDUE MG M 476
06AC6SOFTWAREASP N:203 , GLU N:204 , FMT N:477BINDING SITE FOR RESIDUE MG N 476
07AC7SOFTWAREASP O:203 , GLU O:204 , FMT O:477BINDING SITE FOR RESIDUE MG O 476
08AC8SOFTWARETHR L:173 , LYS L:201 , ASP L:203 , GLU L:204 , HIS L:294 , HIS L:327 , MG L:476 , HOH L:588 , HOH L:653BINDING SITE FOR RESIDUE FMT L 477
09AC9SOFTWARETHR M:173 , LYS M:201 , ASP M:203 , GLU M:204 , HIS M:294 , HIS M:327 , MG M:476BINDING SITE FOR RESIDUE FMT M 477
10ACTAUTHORLYS L:201 , ASP L:203 , GLU L:204 , MG L:476CATALYTIC RESIDUES
11AD1SOFTWARETHR N:173 , LYS N:201 , ASP N:203 , GLU N:204 , HIS N:294 , HIS N:327 , MG N:476BINDING SITE FOR RESIDUE FMT N 477
12AD2SOFTWARETHR O:173 , LYS O:201 , ASP O:203 , GLU O:204 , HIS O:294 , HIS O:327 , MG O:476BINDING SITE FOR RESIDUE FMT O 477

(-) SS Bonds  (7, 7)

Asymmetric Unit
No.Residues
1L:172 -L:192
2L:247 -N:247
3M:172 -M:192
4M:247 -M:247
5N:172 -N:192
6O:172 -O:192
7O:247 -O:247

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Lys L:175 -Pro L:176
2Lys M:175 -Pro M:176
3Lys N:175 -Pro N:176
4Lys O:175 -Pro O:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1AUS)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RUBISCO_LARGEPS00157 Ribulose bisphosphate carboxylase large chain active site.RBL_SPIOL196-204
 
 
 		  4L:196-204
M:196-204
N:196-204
O:196-204
Biological Unit 1 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RUBISCO_LARGEPS00157 Ribulose bisphosphate carboxylase large chain active site.RBL_SPIOL196-204
 
 
 		  8L:196-204
M:196-204
N:196-204
O:196-204

(-) Exons   (0, 0)

(no "Exon" information available for 1AUS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain L from PDB  Type:PROTEIN  Length:439
 aligned with RBL_SPIOL | P00875 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:444
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459    
            RBL_SPIOL    20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
               SCOP domains d1ausl2 L:20-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                d1ausl1 L:148-463 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --1ausL01 L:22-148  [code=3.30.70.150, no name defined]                                                                          1ausL02 L:149-462 Rubisco                                                                                                                                                                                                                                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhh...........eeeeeeee......hhhhhhhhhhh.........hhhhh..hhh...eeeeeee.......eeeeeee.hhh.....hhhhhhhhh..hhh.....eeeeeeee..hhhhhh.......hhhhhhhh......eeeee........hhhhhhhhhhhhhh...eee............hhhhhhhhhhhhhhhhhhh....eee.......hhhhhhhhhhhhhh...eeeeehhhh.hhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee.....-----.hhhhhhhhhhhh.......hhh..............eeee.....hhhhhhhhhhh...eeee..hhhh.....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1aus L  20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVV-----ERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329  |    339       349       359       369       379       389       399       409       419       429       439       449       459    
                                                                                                                                                                                                                                                                                                                                                  332   338                                                                                                                             


Chain M from PDB  Type:PROTEIN  Length:439
 aligned with RBL_SPIOL | P00875 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:444
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459    
            RBL_SPIOL    20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
               SCOP domains d1ausm2 M:20-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                d1ausm1 M:148-463 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --1ausM01 M:22-148  [code=3.30.70.150, no name defined]                                                                          1ausM02 M:149-462 Rubisco                                                                                                                                                                                                                                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhh...........eeeeeeee......hhhhhhhhhhh.........hhhhh..hhh...eeeeeee.......eeeeeee.hhh.....hhhhhhhhh..hhh.....eeeeeeee..hhhhhh.......hhhhhhhh......eeeee........hhhhhhhhhhhhhh...eee............hhhhhhhhhhhhhhhhhhh....eee.......hhhhhhhhhhhhhh...eeeeehhhh.hhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee.....-----.hhhhhhhhhhhh.......hhh..............eeee.....hhhhhhhhhhh...eeee..hhhh.....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1aus M  20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVV-----ERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329  |    339       349       359       369       379       389       399       409       419       429       439       449       459    
                                                                                                                                                                                                                                                                                                                                                  332   338                                                                                                                             


Chain N from PDB  Type:PROTEIN  Length:439
 aligned with RBL_SPIOL | P00875 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:444
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459    
            RBL_SPIOL    20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
               SCOP domains d1ausn2 N:20-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                d1ausn1 N:148-463 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --1ausN01 N:22-148  [code=3.30.70.150, no name defined]                                                                          1ausN02 N:149-462 Rubisco                                                                                                                                                                                                                                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhh...........eeeeeeee......hhhhhhhhhhh.........hhhhh..hhh...eeeeeee.......eeeeeee.hhh.....hhhhhhhhh..hhh.....eeeeeeee..hhhhhh.......hhhhhhhh......eeeee........hhhhhhhhhhhhhh...eee............hhhhhhhhhhhhhhhhhhh....eee.......hhhhhhhhhhhhhh...eeeeehhhh.hhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee.....-----.hhhhhhhhhhhh.......hhh..............eeee.....hhhhhhhhhhh...eeee..hhhh.....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1aus N  20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVV-----ERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329  |    339       349       359       369       379       389       399       409       419       429       439       449       459    
                                                                                                                                                                                                                                                                                                                                                  332   338                                                                                                                             


Chain O from PDB  Type:PROTEIN  Length:439
 aligned with RBL_SPIOL | P00875 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:444
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459    
            RBL_SPIOL    20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
               SCOP domains d1auso2 O:20-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                d1auso1 O:148-463 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --1ausO01 O:22-148  [code=3.30.70.150, no name defined]                                                                          1ausO02 O:149-462 Rubisco                                                                                                                                                                                                                                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhh...........eeeeeeee......hhhhhhhhhhh.........hhhhh..hhh...eeeeeee.......eeeeeee.hhh.....hhhhhhhhh..hhh.....eeeeeeee..hhhhhh.......hhhhhhhh......eeeee........hhhhhhhhhhhhhh...eee............hhhhhhhhhhhhhhhhhhh....eee.......hhhhhhhhhhhhhh...eeeeehhhh.hhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee.....-----.hhhhhhhhhhhh.......hhh..............eeee.....hhhhhhhhhhh...eeee..hhhh.....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1aus O  20 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVV-----ERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWK 463
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329  |    339       349       359       369       379       389       399       409       419       429       439       449       459    
                                                                                                                                                                                                                                                                                                                                                  332   338                                                                                                                             


Chain S from PDB  Type:PROTEIN  Length:123
 aligned with RBS2_SPIOL | Q43832 from UniProtKB/Swiss-Prot  Length:180

    Alignment length:123
                                    67        77        87        97       107       117       127       137       147       157       167       177   
           RBS2_SPIOL    58 MKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAGY 180
               SCOP domains d1auss_ S: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                  SCOP domains
               CATH domains 1ausS00 S:1-123  [code=3.30.190.10, no name defined]                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhhhhh..eeeeeee......................eee.........hhhhhhhhhhhhhh....eeeeeee........eeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aus S   1 MQVWPILNLKKYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNREVQCISFIAYKPAGY 123
                                    10        20        30        40        50        60        70        80        90       100       110       120   


Chain T from PDB  Type:PROTEIN  Length:123
 aligned with RBS2_SPIOL | Q43832 from UniProtKB/Swiss-Prot  Length:180

    Alignment length:123
                                    67        77        87        97       107       117       127       137       147       157       167       177   
           RBS2_SPIOL    58 MKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAGY 180
               SCOP domains d1aust_ T: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                  SCOP domains
               CATH domains 1ausT00 T:1-123  [code=3.30.190.10, no name defined]                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhhhhh..eeeeeee......................eee.........hhhhhhhhhhhhhh....eeeeeee........eeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aus T   1 MQVWPILNLKKYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNREVQCISFIAYKPAGY 123
                                    10        20        30        40        50        60        70        80        90       100       110       120   


Chain U from PDB  Type:PROTEIN  Length:123
 aligned with RBS2_SPIOL | Q43832 from UniProtKB/Swiss-Prot  Length:180

    Alignment length:123
                                    67        77        87        97       107       117       127       137       147       157       167       177   
           RBS2_SPIOL    58 MKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAGY 180
               SCOP domains d1ausu_ U: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                  SCOP domains
               CATH domains 1ausU00 U:1-123  [code=3.30.190.10, no name defined]                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhhhhh..eeeeeee......................eee.........hhhhhhhhhhhhhh....eeeeeee........eeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aus U   1 MQVWPILNLKKYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNREVQCISFIAYKPAGY 123
                                    10        20        30        40        50        60        70        80        90       100       110       120   


Chain V from PDB  Type:PROTEIN  Length:123
 aligned with RBS2_SPIOL | Q43832 from UniProtKB/Swiss-Prot  Length:180

    Alignment length:123
                                    67        77        87        97       107       117       127       137       147       157       167       177   
           RBS2_SPIOL    58 MKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAGY 180
               SCOP domains d1ausv_ V: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                  SCOP domains
               CATH domains 1ausV00 V:1-123  [code=3.30.190.10, no name defined]                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhhhhh..eeeeeee......................eee.........hhhhhhhhhhhhhh....eeeeeee........eeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 1aus V   1 MQVWPILNLKKYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNREVQCISFIAYKPAGY 123
                                    10        20        30        40        50        60        70        80        90       100       110       120
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 12)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1AUS)

(-) Gene Ontology  (13, 23)

Asymmetric Unit(hide GO term definitions)
Chain L,M,N,O   (RBL_SPIOL | P00875)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0019253    reductive pentose-phosphate cycle    The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

Chain S,T,U,V   (RBS2_SPIOL | Q43832)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

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  1aus
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  RBL_SPIOL | P00875
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  RBS2_SPIOL | Q43832
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  4.1.1.39
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RBL_SPIOL | P00875: 1aa1 1ir1 1rbo 1rco 1rcx 1rxo 1upm 1upp 8ruc
        RBS2_SPIOL | Q43832: 1aa1 1ir1 1upm 1upp 1uzd

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1AUS)