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1AL0
Asym. Unit
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Asym.Unit (175 KB)
Biol.Unit 1, α-C (9.4 MB)
Biol.Unit 1 (9.4 MB)
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(1)
Title
:
PROCAPSID OF BACTERIOPHAGE PHIX174
Authors
:
M. G. Rossmann, T. Dokland
Date
:
06 Jun 97 (Deposition) - 28 Jan 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.50
Chains
:
Asym. Unit : B,F,G,1,2,3,4
Biol. Unit 1: B,F,G,1,2,3,4 (60x)
Keywords
:
Complex (Virus Capsid Proteins), Bacteriophage, Procapsid, Scaffolding Protein, Chaperone, Icosahedral Virus
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
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Reference
:
T. Dokland, R. Mckenna, L. L. Ilag, B. R. Bowman, N. L. Incardona, B. A. Fane, M. G. Rossmann
Structure Of A Viral Procapsid With Molecular Scaffolding.
Nature V. 389 308 1997
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 6)
Info
All SCOP Domains
1a: SCOP_d1al01_ (1:)
1b: SCOP_d1al02_ (2:)
1c: SCOP_d1al03_ (3:)
1d: SCOP_d1al04_ (4:)
2a: SCOP_d1al0f_ (F:)
2b: SCOP_d1al0g_ (G:)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
Scaffolding protein gpD of bacteriophage procapsid
(3)
Superfamily
:
Scaffolding protein gpD of bacteriophage procapsid
(3)
Family
:
Scaffolding protein gpD of bacteriophage procapsid
(3)
Protein domain
:
Scaffolding protein gpD of bacteriophage procapsid
(3)
Bacteriophage phi-X174 [TaxId: 10847]
(3)
1a
d1al01_
1:
1b
d1al02_
2:
1c
d1al03_
3:
1d
d1al04_
4:
Class
:
All beta proteins
(24004)
Fold
:
Nucleoplasmin-like/VP (viral coat and capsid proteins)
(278)
Superfamily
:
ssDNA viruses
(39)
Family
:
Microviridae-like VP
(7)
Protein domain
:
Microvirus capsid proteins
(7)
Bacteriophage phi-X174 [TaxId: 10847]
(4)
2a
d1al0f_
F:
2b
d1al0g_
G:
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1al0300 (3:5-144)
1b: CATH_1al0100 (1:6-148)
1c: CATH_1al0400 (4:7-152)
1d: CATH_1al0200 (2:6-138)
2a: CATH_1al0F00 (F:4-421)
3a: CATH_1al0G00 (G:1-175)
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Organisms
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Procapsid Of Bacteriophage Phix174, Chain 1
(3)
Homologous Superfamily
:
Procapsid Of Bacteriophage Phix174, Chain 1
(3)
Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c. Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c. Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c.
(2)
1a
1al0300
3:5-144
1b
1al0100
1:6-148
1c
1al0400
4:7-152
1d
1al0200
2:6-138
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1
(6)
Homologous Superfamily
:
Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1
(6)
Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c. Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c. Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c.
(2)
2a
1al0F00
F:4-421
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.20, no name defined]
(133)
Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c. Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c. Enterobacteria phage phix174. Organism_taxid: 10847. Strain: c.
(2)
3a
1al0G00
G:1-175
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (175 KB)
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Biol.Unit 1 (9.4 MB)
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