JenaLib Home    
[JenaLib Home]     [Helix Analysis Home]   

Nucleic acid double helix structures:  Dodecamers

Select a structure for analysis of double helix geometry.

Number of base pairs: 12
Number of structures available: 57


PDB code   NDB code   Method   Nucleic acid  

  1AL51AL5NMR
A-TRACT RNA DODECAMER, NMR, 12 STRUCTURES
  1BW71BW7NMR
SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING A REPLICABLE DIFLUOROTOLUENE-ADENINE PAIR
  1CS21CS2NMR
NMR STRUCTURES OF B-DNA D(CTACTGCTTTAG).D(CTAAAGCAGTAG)
  116DADL045X-ray
/DNA$ (5'-$D(*CP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*G)-3')
  117DADL046X-ray
/DNA$ (5'-$D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3')
  144DGDLB24X-ray
DNA (5'-D(*CP*GP*CP*(E)GP*AP*AP*TP*TP*CP*GP*CP*G)-3') COMPLEXED WITH SN6999
  255DARL037X-ray
CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS
  157DARL048X-ray
RNA (5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*AP*GP*CP*G)-3')
  2ATWX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2B0IX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  1BDNBDL015X-ray
/DNA$ (5'-$D(CP*GP*CP*AP*AP*AP*AP*AP*TP*GP*CP*GP)-3') AND ITS COMPLEMENTARY STRAND (5'-$D(CP*GP*CP*AP*TP*TP*TP*TP*TP*GP*CP*GP)-3')
  6BNAGDLB05X-ray
/DNA$ (B, 5(PRIME)- $D(*CP*GP*CP*GP*AP*AP*TP*TP*==BR==*CP*GP*CP*G)-3(PRIME)) COMPLEX WITH NETROPSIN
  1DNEGDL004X-ray
/DNA$-5(PRIME)- $D(*CP*GP*CP*GP*AP*TP*AP*TP*CP*GP*CP*G)-3(PRIME)) COMPLEX WITH NETROPSIN
  1G3XDD0037X-ray
INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMER
  2GXCX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXDX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXEX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXHX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXIX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXJX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXKX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXMX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXNX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXOX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXPX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXRX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXTX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXVX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXXX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GXYX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GY0X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GY1X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GY2X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GY3X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GY4X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GY6X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GY8X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GYEX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GYFX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GYGX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GYHX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GYJX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2GYLX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2IRJX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2IRKX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2IRLX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  2KBPX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  1KMLX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  1LU5DD0050X-ray
2.4 ANGSTROM CRYSTAL STRUCTURE OF THE ASYMMETRIC PLATINUM COMPLEX {PT(AMMINE)(CYCLOHEXYLAMINE)}2+ BOUND TO A DODECAMER DNA DUPLEX
  1NDNBDL032X-ray
/DNA$ NICKED DODECAMER DOUBLE HELIX (5'-$D(CP*GP*CP*GP*AP*AP*AP*AP*CP*GP*CP*GP)-3') AND ITS COMPLEMENTARY STRANDS (5'-$D(CP*GP*CP*GP*TP*TP)-3') AND (5'-$D(TP*TP*CP*GP*CP*GP)-3')
  2PY9X-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  1QPHAD0005X-ray
CRYSTAL STRUCTURE OF THE A-DNA DODECAMER GACCACGTGGTC
  2RQJX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  1SDRARL062X-ray
RNA DODECAMER (A-FORM, R(UAAGGAGGUGAU)
  1YYKX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  1YYOX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE
  1YYWX-ray
INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DN WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE


Perl script:    select.nuc.pl  (4 Feb 2013)
Author:    Peter Slickers  (slickers@imb-jena.de),  IMB Jena,  Germany