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Class: All alpha proteins (14657)
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Fold: A DNA-binding domain in eukaryotic transcription factors (2)
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Superfamily: A DNA-binding domain in eukaryotic transcription factors (2)
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Family: A DNA-binding domain in eukaryotic transcription factors (2)
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Protein domain: Mafg (1)
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Mouse (Mus musculus) [TaxId: 10090] (1)
1K1VA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF MAFG
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Protein domain: Skn-1 (1)
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Nematode (Caenorhabditis elegans) [TaxId: 6239] (1)
1SKNP:THE BINDING DOMAIN OF SKN-1 IN COMPLEX WITH DNA: A NEW DNA-BINDING MOTIF
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Fold: ATP-dependent DNA ligase DNA-binding domain (1)
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Superfamily: ATP-dependent DNA ligase DNA-binding domain (1)
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Family: ATP-dependent DNA ligase DNA-binding domain (1)
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Protein domain: DNA ligase I (LIG1) (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
1X9NA:262-533CRYSTAL STRUCTURE OF HUMAN DNA LIGASE I BOUND TO 5'-ADENYLATED, NICKED DNA
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Fold: DNA/RNA-binding 3-helical bundle (1299)
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Superfamily: ARID-like (14)
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Family: ARID domain (12)
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Protein domain: automated matches (5)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
2LI6A:1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR YEAST PROTEIN
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Human (Homo sapiens) [TaxId: 9606] (4)
2CXYA:CRYSTAL STRUCTURE OF THE HBAF250B AT-RICH INTERACTION DOMAIN (ARID)
2EH9A:CRYSTAL STRUCTURE OF THE HBAF250B AT-RICH INTERACTION DOMAIN (ARID)
2KK0A:SOLUTION STRUCTURE OF DEAD RINGER-LIKE PROTEIN 1 (AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 3A) FROM HOMO SAPIENS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HR4394C
4LJXA:; B:CRYSTAL STRUCTURE OF AN AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 3A (ARID3A) FROM HOMO SAPIENS AT 2.21 A RESOLUTION
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Protein domain: DNA-binding domain from the dead ringer protein (2)
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Fruit fly (Drosophila melanogaster) [TaxId: 7227] (2)
1C20A:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN FROM THE DEAD RINGER PROTEIN
1KQQA:SOLUTION STRUCTURE OF THE DEAD RINGER ARID-DNA COMPLEX
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Protein domain: MRF-2 DNA-binding domain (2)
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Human (Homo sapiens) [TaxId: 9606] (2)
1IG6A:HUMAN MRF-2 DOMAIN, NMR, 11 STRUCTURES
2OEHA:1-107DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE MRF2-DNA COMPLEX USING PARAMAGNETIC SPIN LABELING
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Protein domain: SWI-SNF complex protein p270, SMARCF1 (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
1RYUA:SOLUTION STRUCTURE OF THE SWI1 ARID
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Protein domain: Transcription regulator Adr6 (Swi1) (2)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1KKXA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF ADR6
1KN5A:SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES CEREVISIAE
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Family: automated matches (2)
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Protein domain: automated matches (2)
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Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
2LM1A:SOLUTION NMR STRUCTURE OF LYSINE-SPECIFIC DEMETHYLASE LID FROM DROSOPHILA MELANOGASTER, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET FR824D
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Mouse (Mus musculus) [TaxId: 10090] (1)
2EQYA:SOLUTION STRUCTURE OF THE ARID DOMAIN OF JARID1B PROTEIN
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Superfamily: C-terminal effector domain of the bipartite response regulators (45)
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Family: automated matches (19)
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Protein domain: automated matches (19)
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Bacillus subtilis [TaxId: 1423] (1)
2D1VA:CRYSTAL STRUCTURE OF DNA-BINDING DOMAIN OF BACILLUS SUBTILIS YYCF
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Deinococcus radiodurans [TaxId: 1299] (2)
3Q9SA:123-212CRYSTAL STRUCTURE OF RRA(1-215) FROM DEINOCOCCUS RADIODURANS
3Q9VA:; B:CRYSTAL STRUCTURE OF RRA C-TERMINAL DOMAIN(123-221) FROM DEINOCOCCUS RADIODURANS
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Enterococcus faecalis [TaxId: 226185] (1)
2HWVA:CRYSTAL STRUCTURE OF AN ESSENTIAL RESPONSE REGULATOR DNA BINDING DOMAIN, VICRC IN ENTEROCOCCUS FAECALIS, A MEMBER OF THE YYCF SUBFAMILY.
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Escherichia coli K-12 [TaxId: 83333] (1)
3ZQ7A:THE STRUCTURE OF DNA-BINDING DOMAIN OF RESPONSE REGULATOR FROM ESCHERICHIA COLI K-12
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Helicobacter pylori [TaxId: 85963] (3)
2HQNA:STRUCTURE OF A ATYPICAL ORPHAN RESPONSE REGULATOR PROTEIN REVEALED A NEW PHOSPHORYLATION-INDEPENDENT REGULATORY MECHANISM
2HQRA:118-223; B:118-223STRUCTURE OF A ATYPICAL ORPHAN RESPONSE REGULATOR PROTEIN REVEALED A NEW PHOSPHORYLATION-INDEPENDENT REGULATORY MECHANISM
2K4JA:ARSR DNA BINDING DOMAIN
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Klebsiella pneumoniae [TaxId: 1185418] (1)
2M87A:STRUCTURAL BASIS OF DNA RECOGNITION BY THE EFFECTOR DOMAIN OF KLEBSIELLA PNEUMONIAE PMRA
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Klebsiella pneumoniae [TaxId: 573] (1)
2JZYA:SOLUTION STRUCTURE OF C-TERMINAL EFFECTOR DOMAIN OF PUTATIVE TWO-COMPONENT-SYSTEM RESPONSE REGULATOR INVOLVED IN COPPER RESISTANCE FROM KLEBSIELLA PNEUMONIAE
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Mycobacterium tuberculosis [TaxId: 1773] (3)
1ZLJA:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN
1ZLKA:; B:CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN-DNA COMPLEX
3C57A:; B:CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN CRYSTAL FORM II
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Mycobacterium tuberculosis [TaxId: 83332] (2)
2OQRA:129-226THE STRUCTURE OF THE RESPONSE REGULATOR REGX3 FROM MYCOBACTERIUM TUBERCULOSIS
2PMUA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF PHOP
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Staphylococcus aureus [TaxId: 1280] (2)
2RNJA:NMR STRUCTURE OF THE S. AUREUS VRAR DNA BINDING DOMAIN
2ZXJA:; B:CRYSTAL STRUCTURE OF YYCF DNA-BINDING DOMAIN FROM STAPHYLOCOCCUS AUREUS
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Staphylococcus epidermidis [TaxId: 176280] (1)
4IXAA:; B:STRUCTURE OF DNA-BINDING DOMAIN OF THE RESPONSE REGULATOR SAER FROM STAPHYLOCOCCUS EPIDERMIDIS
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Streptococcus pyogenes [TaxId: 1314] (1)
3RJPA:CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF COVR FROM STREPTOCOCCUS PYOGENES
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Family: GerE-like (LuxR/UhpA family of transcriptional regulators) (11)
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Protein domain: Germination protein GerE (1)
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Bacillus subtilis [TaxId: 1423] (1)
1FSEA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS REGULATORY PROTEIN GERE
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Protein domain: Nitrate/nitrite response regulator (NarL) (5)
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Escherichia coli [TaxId: 562] (5)
1A04A:150-216; B:150-216THE STRUCTURE OF THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL IN THE MONOCLINIC C2 CRYSTAL FORM
1JE8A:; B:; E:; F:TWO-COMPONENT RESPONSE REGULATOR NARL/DNA COMPLEX: DNA BENDING FOUND IN A HIGH AFFINITY SITE
1RNLA:155-216THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL
1ZG1A:151-216; B:151-216; E:151-216; F:151-216NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
1ZG5A:151-216; F:151-216; B:151-216; E:151-216NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE
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Protein domain: Quorum-sensing transcription factor TraR, C-terminal domain (2)
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Agrobacterium tumefaciens [TaxId: 358] (2)
1H0MA:170-234; B:170-234; C:171-234; D:170-234THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA
1L3LA:170-234; B:170-234; C:172-234; D:172-234CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA
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Protein domain: Response regulatory protein StyR, C-terminal domain (2)
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Pseudomonas fluorescens [TaxId: 294] (2)
1YIOA:131-200CRYSTALLOGRAPHIC STRUCTURE OF RESPONSE REGULATOR STYR FROM PSEUDOMONAS FLUORESCENS
1ZN2A:131-200LOW RESOLUTION STRUCTURE OF RESPONSE REGULATOR STYR
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Protein domain: Transcriptional regulator RcsB (1)
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Erwinia amylovora [TaxId: 552] (1)
1P4WA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF THE ERWINIA AMYLOVORA RCSB PROTEIN
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Family: PhoB-like (13)
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Protein domain: OmpR (3)
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Escherichia coli [TaxId: 562] (3)
1ODDA:OMPR C-TERMINAL DOMAIN (OMPR-C) FROM ESCHERICHIA COLI
1OPCA:OMPR DNA-BINDING DOMAIN, ESCHERICHIA COLI
2JPBA:SOLUTION STRUCTURE OF OMPR-C DNA BINDING PROTEIN
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Protein domain: PhoB (5)
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Escherichia coli [TaxId: 562] (4)
1GXPA:; B:; E:; F:PHOB EFFECTOR DOMAIN IN COMPLEX WITH PHO BOX DNA.
1GXQA:CRYSTAL STRUCTURE OF THE PHOB EFFECTOR DOMAIN
1QQIA:SOLUTION STRUCTURE OF THE DNA-BINDING AND TRANSACTIVATION DOMAIN OF PHOB FROM ESCHERICHIA COLI
2Z33A:SOLUTION STRUCTURE OF THE DNA COMPLEX OF PHOB DNA-BINDING/TRANSACTIVATION DOMAIN
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Thermotoga maritima [TaxId: 2336] (1)
1KGSA:124-225CRYSTAL STRUCTURE AT 1.50 A OF AN OMPR/PHOB HOMOLOG FROM THERMOTOGA MARITIMA
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Protein domain: Probable regulatory protein EmbR (2)
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Mycobacterium tuberculosis [TaxId: 1773] (2)
2FEZA:10-104MYCOBACTERIUM TUBERCULOSIS EMBR
2FF4A:10-104; B:10-104MYCOBACTERIUM TUBERCULOSIS EMBR IN COMPLEX WITH LOW AFFINITY PHOSPHOPEPTIDE
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Protein domain: Response regulator DrrB (1)
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Thermotoga maritima [TaxId: 2336] (1)
1P2FA:121-217CRYSTAL STRUCTURE ANALYSIS OF RESPONSE REGULATOR DRRB, A THERMOTOGA MARITIMA OMPR/PHOB HOMOLOG
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Protein domain: Transcriptional regulatory protein PrrA (2)
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Mycobacterium tuberculosis [TaxId: 1773] (2)
1YS6A:128-233; B:128-233CRYSTAL STRUCTURE OF THE RESPONSE REGULATORY PROTEIN PRRA FROM MYCOBACTERIUM TUBERCULOSIS
1YS7A:128-233; B:128-233CRYSTAL STRUCTURE OF THE RESPONSE REGULATOR PROTEIN PRRA COMPLEXED WITH MG2+
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Family: Spo0A (2)
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Protein domain: Spo0A (2)
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Bacillus stearothermophilus [TaxId: 1422] (1)
1FC3A:; B:; C:THE CRYSTAL STRUCTURE OF TRANS-ACTIVATION DOMAIN OF THE SPORULATION RESPONSE REGULATOR, SPO0A
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Bacillus subtilis [TaxId: 1423] (1)
1LQ1A:; B:; C:; D:DNA COMPLEXED STRUCTURE OF THE KEY TRANSCRIPTION FACTOR INITIATING DEVELOPMENT IN SPORULATION BACTERIA
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Superfamily: Homeodomain-like (373)
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Family: Alr1493-like (1)
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Protein domain: Hypothetical protein Ava_0674 (Alr1493 orthologue) (1)
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Anabaena variabilis [TaxId: 1172] (1)
2GA1A:1-102; B:CRYSTAL STRUCTURE OF A DUF433 MEMBER PROTEIN (AVA_0674) FROM ANABAENA VARIABILIS ATCC 29413 AT 2.00 A RESOLUTION
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Family: AraC type transcriptional activator (2)
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Protein domain: MarA (1)
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Escherichia coli [TaxId: 562] (1)
1BL0A:9-62; A:63-124MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN (MARA)/DNA COMPLEX
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Protein domain: Rob transcription factor, N-terminal domain (1)
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Escherichia coli [TaxId: 562] (1)
1D5YA:3-56; A:57-121; B:3-56; B:57-121; C:3-56; C:57-121; D:3-56; D:57-121CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA
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Family: automated matches (53)
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Protein domain: automated matches (53)
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African clawed frog (Xenopus laevis) [TaxId: 8355] (1)
2NOGB:828-895SANT DOMAIN STRUCTURE OF XENOPUS REMODELING FACTOR ISWI
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Bacillus cereus [TaxId: 1396] (1)
2WV1A:4-76; B:4-76CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169-186 SUBSTITUTED BY A LINKER CONTAINING TWO THROMBIN SITES
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3UKGA:360-445CRYSTAL STRUCTURE OF RAP1/DNA COMPLEX
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Chicken (Gallus gallus) [TaxId: 9031] (1)
3ZOBA:SOLUTION STRUCTURE OF CHICKEN ENGRAILED 2 HOMEODOMAIN
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Escherichia coli [TaxId: 562] (5)
2VKVA:6-67TETR (BD) VARIANT L17G WITH REVERSE PHENOTYPE
2XRLA:2-67TET-REPRESSOR CLASS D T103A WITH DOXYCYCLINE
4AC0A:2-67TETR(B) IN COMPLEX WITH MINOCYCLINE AND MAGNESIUM
4B1RA:2-67TETRACYCLINE REPRESSOR CLASS D MUTANT H100A IN COMPLEX WITH ISO-7-CHLORTETRACYCLINE
4B3AA:2-67TETRACYCLINE REPRESSOR CLASS D MUTANT H100A IN COMPLEX WITH TETRACYCLINE
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Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] (1)
2ELKA:SOLUTION STRUCTURE OF THE SANT DOMAIN OF FISSION YEAST SPCC24B10.08C PROTEIN
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Golden hamster (Mesocricetus auratus) [TaxId: 10036] (1)
2H1KA:; B:CRYSTAL STRUCTURE OF THE PDX1 HOMEODOMAIN IN COMPLEX WITH DNA
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Human (Homo sapiens) [TaxId: 9606] (19)
2DA1A:SOLUTION STRUCTURE OF THE FIRST HOMEOBOX DOMAIN OF AT-BINDING TRANSCRIPTION FACTOR 1 (ATBF1)
2DA3A:SOLUTION STRUCTURE OF THE THIRD HOMEOBOX DOMAIN OF AT-BINDING TRANSCRIPTION FACTOR 1 (ATBF1)
2DA5A:SOLUTION STRUCTURE OF THE SECOND HOMEOBOX DOMAIN OF ZINC FINGERS AND HOMEOBOXES PROTEIN 3 (TRIPLE HOMEOBOX 1 PROTEIN)
2DJNA:THE SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF HUMAN HOMEOBOX PROTEIN DLX-5
2DMQA:SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF LIM/HOMEOBOX PROTEIN LHX9
2DMTA:SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF HOMEOBOX PROTEIN BARH-LIKE 1
2DMUA:SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF HOMEOBOX PROTEIN GOOSECOID
2DN0A:SOLUTION STRUCTURE OF THE SECOND HOMEOBOX DOMAIN OF HUMAN ZINC FINGERS AND HOMEOBOXES PROTEIN 3
2K40A:NMR STRUCTURE OF HESX-1 HOMEODOMAIN DOUBLE MUTANT R31L/E42L
2L7FP:SOLUTION STRUCTURE OF THE PITX2 HOMEODOMAIN
2L7MP:SOLUTION STRUCTURE OF THE PITX2 HOMEODOMAIN R24H MUTANT
2L7ZA:NMR STRUCTURE OF A13 HOMEDOMAIN
2LTPA:SOLUTION STRUCTURE OF THE SANT2 DOMAIN OF THE HUMAN NUCLEAR RECEPTOR COREPRESSOR 2 (NCOR2), NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET ID HR4636E
2M0CA:SOLUTION NMR STRUCTURE OF HOMEOBOX DOMAIN OF HUMAN ALX4, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HR4490C
2M34A:NMR STRUCTURE OF THE HOMEODOMAIN TRANSCRIPTION FACTOR GBX1 FROM HOMO SAPIENS
2ME0A:NMR STRUCTURE OF THE HOMEODOMAIN TRANSCRIPTION FACTOR GBX1 FROM HOMO SAPIENS SOLVED IN THE PRESENCE OF THE DNA SEQUENCE CGACTAATTAGTCG
2ME6A:NMR STRUCTURE OF THE HOMEODOMAIN TRANSCRIPTION FACTOR GBX1 FROM HOMO SAPIENS IN COMPLEX WITH THE DNA SEQUENCE CGACTAATTAGTCG
2YUMA:SOLUTION STRUCTURE OF THE MYB-LIKE DNA-BINDING DOMAIN OF HUMAN ZZZ3 PROTEIN
3A03A:CRYSTAL STRUCTURE OF HOX11L1 HOMEODOMAIN
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Mouse (Mus musculus) [TaxId: 10090] (5)
2D9AA:SOLUTION STRUCTURE OF RSGI RUH-050, A MYB DNA-BINDING DOMAIN IN MOUSE CDNA
2DMSA:SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF HOMEOBOX PROTEIN OTX2
2LD5A:SOLUTION NMR-DERIVED COMPLEX STRUCTURE OF HOXA13 DNA BINDING DOMAIN BOUND TO DNA
2VI6A:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF THE NANOG HOMEODOMAIN
2XSDC:343-397CRYSTAL STRUCTURE OF THE DIMERIC OCT-6 (POU3F1) POU DOMAIN BOUND TO PALINDROMIC MORE DNA
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Mycobacterium tuberculosis [TaxId: 1773] (12)
3G1LA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM14744
3G1MA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM31381
3G1OA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM14500
3O8GA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM14801
3O8HA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM14950
3Q0UA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM31379
3Q0VA:22-92; B:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM31369
3Q0WA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM33066
3Q3SA:22-94ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND BDM5683
3SDGA:26-92ETHIONAMIDE BOOSTERS PART 2: COMBINING BIOISOSTERIC REPLACEMENT AND STRUCTURE-BASED DRUG DESIGN TO SOLVE PHARMACOKINETIC ISSUES IN A SERIES OF POTENT 1,2,4-OXADIAZOLE ETHR INHIBITORS.
3SFIA:22-94ETHIONAMIDE BOOSTERS PART 2: COMBINING BIOISOSTERIC REPLACEMENT AND STRUCTURE-BASED DRUG DESIGN TO SOLVE PHARMACOKINETIC ISSUES IN A SERIES OF POTENT 1,2,4-OXADIAZOLE ETHR INHIBITORS.
4DW6A:24-93NOVEL N-PHENYL-PHENOXYACETAMIDE DERIVATIVES AS POTENTIAL ETHR INHIBITORS AND ETHIONAMIDE BOOSTERS. DISCOVERY AND OPTIMIZATION USING HIGH-THROUGHPUT SYNTHESIS.
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Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
2D5VA:100-155; B:100-155CRYSTAL STRUCTURE OF HNF-6ALPHA DNA-BINDING DOMAIN IN COMPLEX WITH THE TTR PROMOTER
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Pasteurella multocida [TaxId: 747] (1)
2VPRA:2-67TET REPRESSOR CLASS H IN COMPLEX WITH 5A,6-ANHYDROTETRACYCLINE-MG
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Trichomonas vaginalis [TaxId: 5722] (4)
2K9NA:1-49; A:50-107SOLUTION NMR STRUCTURE OF THE R2R3 DNA BINDING DOMAIN OF MYB1 PROTEIN FROM PROTOZOAN PARASITE TRICHOMONAS VAGINALIS
2KDZA:1-49; A:50-107STRUCTURE OF THE R2R3 DNA BINDING DOMAIN OF MYB1 PROTEIN FROM PROTOZOAN PARASITE TRICHOMONAS VAGINALIS IN COMPLEX WITH MRE-1/MRE-2R DNA
3OSFA:48-96; A:97-150; D:48-96; D:97-150THE STRUCTURE OF PROTOZOAN PARASITE TRICHOMONAS VAGINALIS MYB2 IN COMPLEX WITH MRE-2F-13 DNA
3OSGA:40-96; A:97-150; D:48-96; D:97-150THE STRUCTURE OF PROTOZOAN PARASITE TRICHOMONAS VAGINALIS MYB2 IN COMPLEX WITH MRE-1-12 DNA
(-)
Family: Centromere-binding (3)
(-)
Protein domain: Ars-binding protein 1, ABP1 (1)
(-)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] (1)
1IUFA:-2-75; A:76-141LOW RESOLUTION SOLUTION STRUCTURE OF THE TWO DNA-BINDING DOMAINS IN SCHIZOSACCHAROMYCES POMBE ABP1 PROTEIN
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Protein domain: DNA-binding domain of centromere binding protein B (CENP-B) (2)
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Human (Homo sapiens) [TaxId: 9606] (2)
1BW6A:HUMAN CENTROMERE PROTEIN B (CENP-B) DNA BINDIGN DOMAIN RP1
1HLVA:1-66; A:67-131CRYSTAL STRUCTURE OF CENP-B(1-129) COMPLEXED WITH THE CENP-B BOX DNA
(-)
Family: Cgl2762-like (1)
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Protein domain: Uncharacterized protein Cgl2762 (1)
(-)
Corynebacterium glutamicum [TaxId: 1718] (1)
2JN6A:1-89SOLUTION NMR STRUCTURE OF PROTEIN CGL2762 FROM CORYNEBACTERIUM GLUTAMICUM: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET CGR3
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Family: DNA-binding domain of rap1 (2)
(-)
Protein domain: automated matches (1)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3UKGA:446-601CRYSTAL STRUCTURE OF RAP1/DNA COMPLEX
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Protein domain: DNA-binding domain of rap1 (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1IGNA:360-445; A:446-594; B:360-445; B:446-594DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITE
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Family: DNA-binding domain of telomeric protein (9)
(-)
Protein domain: automated matches (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
3SJMA:; B:CRYSTAL STRUCTURE ANALYSIS OF TRF2-DBD-DNA COMPLEX
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Protein domain: DNA-binding domain of human telomeric protein, hTRF1 (4)
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Human (Homo sapiens) [TaxId: 9606] (4)
1BA5A:DNA-BINDING DOMAIN OF HUMAN TELOMERIC PROTEIN, HTRF1, NMR, 18 STRUCTURES
1ITYA:SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRF1
1IV6A:SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF1
1W0TA:; B:HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
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Protein domain: Telomeric repeat binding factor 2, TRF2 (4)
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Human (Homo sapiens) [TaxId: 9606] (4)
1VF9A:SOLUTION STRUCTURE OF HUMAN TRF2
1VFCA:438-500SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF2
1W0UA:; B:HTRF2 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
1XG1A:5-67SOLUTION STRUCTURE OF MYB-DOMAIN OF HUMAN TRF2
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Family: FIS-like (34)
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Protein domain: DNA-binding domain of NTRC (1)
(-)
Salmonella typhimurium [TaxId: 90371] (1)
1NTCA:; B:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF NTRC WITH THREE ALANINE SUBSTITUTIONS
(-)
Protein domain: FIS protein (31)
(-)
Escherichia coli K-12 [TaxId: 83333] (15)
3IV5A:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP OPTIMAL BINDING SEQUENCE F1
3JR9A:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP OPTIMAL BINDING SEQUENCE F2
3JRAA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27BP NON CONSENSUS SEQUENCE DNA F6
3JRBA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F24 CONTAINING T-TRACT AT CENTER
3JRCA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F29 CONTAINING 5 G/CS AT CENTER
3JRDA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F25 CONTAINING T2A3 SEQUENCE AT CENTER
3JREA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F26 CONTAINING A-TRACT AT CENTER
3JRFA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F27 CONTAINING A C/G AT CENTER
3JRGA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F18
3JRHA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F21
3JRIA:; B:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F23
4IHVB:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP SEQUENCE DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
4IHWB:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP INOSINE SUBSTITUTED DNA F28-DI (AAATTTGTTTGAICITTGAGCAAATTT)
4IHXB:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP 2-AMINOPURINE SUBSTITUTED DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT)
4IHYB:CRYSTAL STRUCTURE OF FIS BOUND TO 27BP INOSINE SUBSTITUTED DNA F29-DI (AAATTTGTTTGIICICTGAGCAAATTT)
(-)
Escherichia coli [TaxId: 562] (16)
1ETKA:; B:THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT Q68A
1ETOA:; B:THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT R71L
1ETQA:; B:; C:; D:THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT R71Y
1ETVA:; B:THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT G72A
1ETWA:; B:THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT G72D
1ETXA:; B:THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT Q74A
1ETYA:; B:THE CRYSTAL STRUCTURE OF E. COLI WILD-TYPE FIS
1F36A:; B:THE CRYSTAL STRUCTURE OF FIS MUTANT K36E REVEALS THAT THE TRANSACTIVATION REGION OF THE FIS PROTEIN CONTAINS EXTENDED MOBILE BETA-HAIRPIN ARMS
1FIAA:; B:CRYSTAL STRUCTURE OF THE FACTOR FOR INVERSION STIMULATION FIS AT 2.0 ANGSTROMS RESOLUTION
1FIPA:; B:THE STRUCTURE OF FIS MUTANT PRO61ALA ILLUSTRATES THAT THE KINK WITHIN THE LONG ALPHA-HELIX IS NOT DUE TO THE PRESENCE OF THE PROLINE RESIDUE
3FISA:; B:THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
4FISA:; B:THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
4IHVA:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP SEQUENCE DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
4IHWA:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP INOSINE SUBSTITUTED DNA F28-DI (AAATTTGTTTGAICITTGAGCAAATTT)
4IHXA:CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP 2-AMINOPURINE SUBSTITUTED DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT)
4IHYA:CRYSTAL STRUCTURE OF FIS BOUND TO 27BP INOSINE SUBSTITUTED DNA F29-DI (AAATTTGTTTGIICICTGAGCAAATTT)
(-)
Protein domain: Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain (1)
(-)
Rhodobacter sphaeroides [TaxId: 1063] (1)
1UMQA:SOLUTION STRUCTURE AND DNA BINDING OF THE EFFECTOR DOMAIN FROM THE GLOBAL REGULATOR PRRA(REGA) FROM R. SPHAEROIDES: INSIGHTS INTO DNA BINDING SPECIFICITY
(-)
Protein domain: Transcriptional regulator TyrR, C-terminal domain (1)
(-)
Haemophilus influenzae [TaxId: 727] (1)
1G2HA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF THE TYRR PROTEIN OF HAEMOPHILUS INFLUENZAE
(-)
Family: GARP response regulators (1)
(-)
Protein domain: Arr10-B (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1IRZA:SOLUTION STRUCTURE OF ARR10-B BELONGING TO THE GARP FAMILY OF PLANT MYB-RELATED DNA BINDING MOTIFS OF THE ARABIDOPSIS RESPONSE REGULATORS
(-)
Family: Homeodomain (93)
(-)
Protein domain: Antennapedia Homeodomain (5)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (5)
1AHDP:DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
1HOMA:DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
1SANA:THE DES(1-6)ANTENNAPEDIA HOMEODOMAIN: COMPARISON OF THE NMR SOLUTION STRUCTURE AND THE DNA BINDING AFFINITY WITH THE INTACT ANTENNAPEDIA HOMEODOMAIN
2HOAA:STRUCTURE DETERMINATION OF THE ANTP(C39->S) HOMEODOMAIN FROM NUCLEAR MAGNETIC RESONANCE DATA IN SOLUTION USING A NOVEL STRATEGY FOR THE STRUCTURE CALCULATION WITH THE PROGRAMS DIANA, CALIBA, HABAS AND GLOMSA
9ANTA:; B:ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
(-)
Protein domain: automated matches (13)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (5)
2R5YA:; B:STRUCTURE OF SCR/EXD COMPLEX BOUND TO A CONSENSUS HOX-EXD SITE
2R5ZA:; B:STRUCTURE OF SCR/EXD COMPLEX BOUND TO A DNA SEQUENCE DERIVED FROM THE FKH GENE
3A01A:; B:; E:; F:CRYSTAL STRUCTURE OF ARISTALESS AND CLAWLESS HOMEODOMAINS BOUND TO DNA
3A02A:CRYSTAL STRUCTURE OF ARISTALESS HOMEODOMAIN
3LNQA:STRUCTURE OF ARISTALESS HOMEODOMAIN IN COMPLEX WITH DNA
(-)
Human (Homo sapiens) [TaxId: 9606] (7)
2DA6A:SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF HEPATOCYTE NUCLEAR FACTOR 1-BETA (HNF-1BETA)
2LMDA:MINIMAL CONSTRAINTS SOLUTION NMR STRUCTURE OF PROSPERO HOMEOBOX PROTEIN 1 FROM HOMO SAPIENS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR4660B
2LP0A:THE SOLUTION STRUCTURE OF HOMEODOMAIN-PROTEIN COMPLEX
3CMYA:STRUCTURE OF A HOMEODOMAIN IN COMPLEX WITH DNA
3K2AA:; B:CRYSTAL STRUCTURE OF THE HOMEOBOX DOMAIN OF HUMAN HOMEOBOX PROTEIN MEIS2
3RKQA:; B:NKX2.5 HOMEODOMAIN DIMER BOUND TO ANF-242 DNA
4J19A:; B:STRUCTURE OF A NOVEL TELOMERE REPEAT BINDING PROTEIN BOUND TO DNA
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
2HI3A:SOLUTION STRUCTURE OF THE HOMEODOMAIN-ONLY PROTEIN HOP
(-)
Protein domain: DNA-binding protein SATB2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WI3A:SOLUTION STRUCTURE OF THE HOMEODOMAIN OF KIAA1034 PROTEIN
(-)
Protein domain: Engrailed Homeodomain (12)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (12)
1DU0A:; B:ENGRAILED HOMEODOMAIN Q50A VARIANT DNA COMPLEX
1ENHA:STRUCTURAL STUDIES OF THE ENGRAILED HOMEODOMAIN
1HDDC:; D:CRYSTAL STRUCTURE OF AN ENGRAILED HOMEODOMAIN-DNA COMPLEX AT 2.8 ANGSTROMS RESOLUTION: A FRAMEWORK FOR UNDERSTANDING HOMEODOMAIN-DNA INTERACTIONS
1P7IA:; B:; C:; D:CRYSTAL STRUCTURE OF ENGRAILED HOMEODOMAIN MUTANT K52A
1P7JA:; C:; D:; B:CRYSTAL STRUCTURE OF ENGRAILED HOMEODOMAIN MUTANT K52E
1ZTRA:0-59SOLUTION STRUCTURE OF ENGRAILED HOMEODOMAIN L16A MUTANT
2HDDA:; B:ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
2HOSA:; B:PHAGE-SELECTED HOMEODOMAIN BOUND TO UNMODIFIED DNA
2HOTA:; B:PHAGE SELECTED HOMEODOMAIN BOUND TO MODIFIED DNA
2JWTA:SOLUTION STRUCTURE OF ENGRAILED HOMEODOMAIN WT
2P81A:ENGRAILED HOMEODOMAIN HELIX-TURN-HELIX MOTIF
3HDDA:; B:ENGRAILED HOMEODOMAIN DNA COMPLEX
(-)
Protein domain: Even-skipped homeodomain (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1JGGA:; B:EVEN-SKIPPED HOMEODOMAIN COMPLEXED TO AT-RICH DNA
(-)
Protein domain: Extradenticle (exd) homeodomain (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1B8IB:STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
(-)
Protein domain: Fushi Tarazu protein (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1FTZA:NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF THE FUSHI TARAZU HOMEODOMAIN FROM DROSOPHILA AND COMPARISON WITH THE ANTENNAPEDIA HOMEODOMAIN
(-)
Protein domain: Hepatocyte nuclear factor 1a (LFB1/HNF1) (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1IC8A:201-276; B:201-278HEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE PRODUCT
(-)
Rat (Rattus rattus) [TaxId: 10117] (2)
1LFBA:THE X-RAY STRUCTURE OF AN ATYPICAL HOMEODOMAIN PRESENT IN THE RAT LIVER TRANSCRIPTION FACTOR LFB1(SLASH)HNF1 AND IMPLICATIONS FOR DNA BINDING
2LFBA:HOMEODOMAIN FROM RAT LIVER LFB1/HNF1 TRANSCRIPTION FACTOR, NMR, 20 STRUCTURES
(-)
Protein domain: Hepatocyte nuclear factor 6 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1S7EA:103-152SOLUTION STRUCTURE OF HNF-6
(-)
Protein domain: Homeo-prospero domain of Prospero protein (2)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (2)
1MIJA:CRYSTAL STRUCTURE OF THE HOMEO-PROSPERO DOMAIN OF D. MELANOGASTER PROSPERO
1XPXA:STRUCTURAL BASIS OF PROSPERO-DNA INTERACTION; IMPLICATIONS FOR TRANSCRIPTION REGULATION IN DEVELOPING CELLS
(-)
Protein domain: Homeobox protein hox-a9 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1PUFA:CRYSTAL STRUCTURE OF HOXA9 AND PBX1 HOMEODOMAINS BOUND TO DNA
(-)
Protein domain: Homeobox protein hox-b1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1B72A:PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
(-)
Protein domain: Homeobox protein hox-b13 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CRAA:7-64SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF HUMAN HOMEO BOX B13
(-)
Protein domain: Homeobox protein pknox1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1X2NA:6-67SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF HUMAN HOMEOBOX PROTEIN PKNOX1
(-)
Protein domain: Homeobox protein prh (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2E1OA:8-64SOLUTION STRUCTURE OF RSGI RUH-028, A HOMEOBOX DOMAIN FROM HUMAN CDNA
(-)
Protein domain: Homeobox-containing protein 1, HMBOX1 (Flj21616) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CUFA:8-89SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF THE HUMAN HYPOTHETICAL PROTEIN FLJ21616
(-)
Protein domain: Homeobox-leucine zipper protein Homez (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2ECCA:SOLUTION STRUCTURE OF THE SECOND HOMEOBOX DOMAIN OF HUMAN HOMEODOMAIN LEUCINE ZIPPER-ENCODING GENE (HOMEZ)
(-)
Protein domain: Homeodomain-only protein, Hop (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1UHSA:SOLUTION STRUCTURE OF MOUSE HOMEODOMAIN-ONLY PROTEIN HOP
(-)
Protein domain: Homeotic bicoid protein (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1ZQ3P:2-68NMR SOLUTION STRUCTURE OF THE BICOID HOMEODOMAIN BOUND TO THE CONSENSUS DNA BINDING SITE TAATCC
(-)
Protein domain: Hypothetical protein 4930532d21rik (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1X58A:8-56SOLUTION STRUCTURES OF THE MYB-LIKE DNA BINDING DOMAIN OF 4930532D21RIK PROTEIN
(-)
Protein domain: Insulin gene enhancer protein isl-1 (1)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1BW5A:THE NMR SOLUTION STRUCTURE OF THE HOMEODOMAIN OF THE RAT INSULIN GENE ENHANCER PROTEIN ISL-1, 50 STRUCTURES
(-)
Protein domain: LAG1 longevity assurance homolog 5, LASS5 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
2CQXA:8-66SOLUTION STRUCTURE OF RSGI RUH-034, A HOMEODOMAIN FROM MOUSE CDNA
(-)
Protein domain: Lag1 longevity assurance homolog 6, LASS6 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1X2MA:8-59SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF MOUSE LAG1 LONGEVITY ASSURANCE HOMOLOG 6
(-)
Protein domain: mat alpha2 Homeodomain (6)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (6)
1AKHB:MAT A1/ALPHA2/DNA TERNARY COMPLEX
1APLC:; D:CRYSTAL STRUCTURE OF A MAT-ALPHA2 HOMEODOMAIN-OPERATOR COMPLEX SUGGESTS A GENERAL MODEL FOR HOMEODOMAIN-DNA INTERACTIONS
1K61A:; B:; C:; D:MATALPHA2 HOMEODOMAIN BOUND TO DNA
1LE8B:CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2-3A HETERODIMER BOUND TO DNA COMPLEX
1MNMC:; D:YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE
1YRNB:CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2 HOMEODOMAIN HETERODIMER BOUND TO DNA
(-)
Protein domain: Mating type protein A1 Homeodomain (6)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (6)
1AKHA:MAT A1/ALPHA2/DNA TERNARY COMPLEX
1F43A:SOLUTION STRUCTURE OF THE MATA1 HOMEODOMAIN
1LE8A:CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2-3A HETERODIMER BOUND TO DNA COMPLEX
1MH3A:472-526MALTOSE BINDING-A1 HOMEODOMAIN PROTEIN CHIMERA, CRYSTAL FORM I
1MH4A:472-523MALTOSE BINDING-A1 HOMEODOMAIN PROTEIN CHIMERA, CRYSTAL FORM II
1YRNA:CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2 HOMEODOMAIN HETERODIMER BOUND TO DNA
(-)
Protein domain: Msx-1 homeodomain (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1IG7A:MSX-1 HOMEODOMAIN/DNA COMPLEX STRUCTURE
(-)
Protein domain: Oct-1 POU Homeodomain (7)
(-)
Human (Homo sapiens) [TaxId: 9606] (7)
1CQTA:102-161; B:602-661CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT
1E3OC:104-160CRYSTAL STRUCTURE OF OCT-1 POU DIMER BOUND TO MORE
1GT0C:97-159CRYSTAL STRUCTURE OF A POU/HMG/DNA TERNARY COMPLEX
1HF0A:102-159; B:102-159CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF OCT-1 BOUND TO DNA AS A DIMER
1O4XA:110-163TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT
1OCTC:102-161CRYSTAL STRUCTURE OF THE OCT-1 POU DOMAIN BOUND TO AN OCTAMER SITE: DNA RECOGNITION WITH TETHERED DNA-BINDING MODULES
1POGA:SOLUTION STRUCTURE OF THE OCT-1 POU-HOMEO DOMAIN DETERMINED BY NMR AND RESTRAINED MOLECULAR DYNAMICS
(-)
Protein domain: Oct-2 POU Homeodomain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1HDPA:SOLUTION STRUCTURE OF A POU-SPECIFIC HOMEODOMAIN: 3D-NMR STUDIES OF HUMAN B-CELL TRANSCRIPTION FACTOR OCT-2
(-)
Protein domain: Oct-3 POU Homeodomain (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1OCPA:SOLUTION STRUCTURE OF OCT3 POU-HOMEODOMAIN
(-)
Protein domain: Paired box protein pax6 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CUEA:7-74SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF THE HUMAN PAIRED BOX PROTEIN PAX-6
(-)
Protein domain: Paired protein (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1FJLA:; B:; C:HOMEODOMAIN FROM THE DROSOPHILA PAIRED PROTEIN BOUND TO A DNA OLIGONUCLEOTIDE
(-)
Protein domain: pbx1 (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1B72B:PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
1PUFB:CRYSTAL STRUCTURE OF HOXA9 AND PBX1 HOMEODOMAINS BOUND TO DNA
(-)
Mouse (Mus musculus) [TaxId: 10090] (2)
1DU6A:SOLUTION STRUCTURE OF THE TRUNCATED PBX HOMEODOMAIN
1LFUP:NMR SOLUTION STRUCTURE OF THE EXTENDED PBX HOMEODOMAIN BOUND TO DNA
(-)
Protein domain: Pit-1 POU homeodomain (1)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1AU7A:103-160; B:103-160PIT-1 MUTANT/DNA COMPLEX
(-)
Protein domain: Pituitary homeobox 2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2LKXA:1-60NMR STRUCTURE OF THE HOMEODOMAIN OF PITX2 IN COMPLEX WITH A TAATCC DNA BINDING SITE
(-)
Protein domain: Thyroid transcription factor 1 homeodomain (1)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1FTTA:THYROID TRANSCRIPTION FACTOR 1 HOMEODOMAIN (RATTUS NORVEGICUS)
(-)
Protein domain: Transcriptional adaptor 2-like, TADA2L, isoform b (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1X41A:8-54SOLUTION STRUCTURE OF THE MYB-LIKE DNA BINDING DOMAIN OF HUMAN TRANSCRIPTIONAL ADAPTOR 2-LIKE, ISOFORM B
(-)
Protein domain: Ultrabithorax (ubx) homeodomain (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1B8IA:STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
(-)
Protein domain: VND/NK-2 protein (4)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (4)
1NK2P:VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, 20 STRUCTURES
1NK3P:VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE
1QRYA:HOMEOBOX PROTEIN VND (VENTRAL NERVOUS SYSTEM DEFECTIVE PROTEIN)
1VNDA:VND/NK-2 PROTEIN (HOMEODOMAIN), NMR
(-)
Protein domain: ZF-HD homeobox protein At4g24660 (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1WH7A:SOLUTION STRUCTURE OF HOMEOBOX DOMAIN OF ARABIDOPSIS THALIANA HYPOTHETICAL PROTEIN F22K18.140
(-)
Protein domain: ZF-HD homeobox protein At5g65410 (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1WH5A:SOLUTION STRUCTURE OF HOMEOBOX DOMAIN OF ARABIDOPSISTHALIANA ZINC FINGER HOMEOBOX FAMILY PROTEIN
(-)
Protein domain: Zinc fingers and homeoboxes protein 1, ZHX1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2ECBA:8-83THE SOLUTION STRUCTURE OF THE THIRD HOMEOBOX DOMAIN OF HUMAN ZINC FINGERS AND HOMEOBOXES PROTEIN
(-)
Family: Middle operon regulator, Mor (1)
(-)
Protein domain: Middle operon regulator, Mor (1)
(-)
Bacteriophage Mu [TaxId: 10677] (1)
1RR7A:CRYSTAL STRUCTURE OF THE MIDDLE OPERON REGULATOR PROTEIN OF BACTERIOPHAGE MU
(-)
Family: Myb/SANT domain (34)
(-)
Protein domain: 2610100b20rik gene product (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1UG2A:SOLUTION STRUCTURE OF MOUSE HYPOTHETICAL GENE (2610100B20RIK) PRODUCT HOMOLOGOUS TO MYB DNA-BINDING DOMAIN
(-)
Protein domain: automated matches (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
4A69C:; D:STRUCTURE OF HDAC3 BOUND TO COREPRESSOR AND INOSITOL TETRAPHOSPHATE
(-)
Protein domain: b-Myb DNA binding domain (1)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (1)
1A5JA:1-55; A:56-110CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES
(-)
Protein domain: c-Myb, DNA-binding domain (16)
(-)
Mouse (Mus musculus) [TaxId: 10090] (16)
1GUUA:CRYSTAL STRUCTURE OF C-MYB R1
1GV2A:89-143; A:144-190CRYSTAL STRUCTURE OF C-MYB R2R3
1GV5A:CRYSTAL STRUCTURE OF C-MYB R2
1GVDA:CRYSTAL STRUCTURE OF C-MYB R2 V103L MUTANT
1H88C:39-88; C:89-143; C:144-190CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1
1H89C:77-88; C:89-143; C:144-191CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2
1IDYA:STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
1IDZA:STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, 20 STRUCTURES
1MBEA:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1
1MBFA:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1
1MBGA:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2
1MBHA:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2
1MBJA:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
1MBKA:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
1MSEC:89-143; C:144-193SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES
1MSFC:89-143; C:144-193SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES
(-)
Protein domain: DnaJ homolog subfamily C member 1 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
2CQQA:8-66SOLUTION STRUCTURE OF RSGI RUH-037, A MYB DNA-BINDING DOMAIN IN HUMAN CDNA
2CQRA:7-66SOLUTION STRUCTURE OF RSGI RUH-043, A MYB DNA-BINDING DOMAIN IN HUMAN CDNA
(-)
Protein domain: Hypothetical protein C14orf106 (KIAA1903) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WGXA:SOLUTION STRUCTURE OF RSGI RUH-022, A MYB DNA-BINDING DOMAIN IN HUMAN CDNA
(-)
Protein domain: Metastasis associated protein MTA3 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
2CRGA:8-64SOLUTION STRUCTURE OF THE MYB-LIKE DNA-BINDING DOMAIN OF MOUSE MTA3 PROTEIN
(-)
Protein domain: MYSM1 (KIAA1915) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CU7A:8-72SOLUTION STRUCTURE OF THE SANT DOMAIN OF HUMAN KIAA1915 PROTEIN
(-)
Protein domain: Nuclear receptor corepressor 2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1XC5A:413-480SOLUTION STRUCTURE OF THE SMRT DEACETYLASE ACTIVATION DOMAIN
(-)
Protein domain: Radialis (1)
(-)
Garden snapdragon (Antirrhinum majus) [TaxId: 4151] (1)
2CJJA:8-70CRYSTAL STRUCTURE OF THE MYB DOMAIN OF THE RAD TRANSCRIPTION FACTOR FROM ANTIRRHINUM MAJUS
(-)
Protein domain: Rap1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1FEXA:SOLUTION STRUCTURE OF MYB-DOMAIN OF HUMAN RAP1
(-)
Protein domain: REST corepressor 1, CoREST (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
2IW5B:376-440STRUCTURAL BASIS FOR COREST-DEPENDENT DEMETHYLATION OF NUCLEOSOMES BY THE HUMAN LSD1 HISTONE DEMETHYLASE
2UXNB:376-440STRUCTURAL BASIS OF HISTONE DEMETHYLATION BY LSD1 REVEALED BY SUICIDE INACTIVATION
(-)
Protein domain: SANT domain of the nucleosome remodeling ATPase ISWI (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1OFCX:799-850NUCLEOSOME RECOGNITION MODULE OF ISWI ATPASE
(-)
Protein domain: Telomere binding protein TBP1 (2)
(-)
Tobacco (Nicotiana tabacum) [TaxId: 4097] (2)
2CKXA:578-660CRYSTAL STRUCTURE OF NGTRF1, DOUBLE-STRANDED TELOMERIC REPEAT BINDING FACTOR FROM NICOTIANA TABACUM.
2QHBA:; B:CRYSTAL STRUCTURE OF NGTRF COMPLEXED WITH TELOMERIC DNA
(-)
Protein domain: Telomere repeat-binding protein (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
2AJEA:9-105SOLUTION STRUCTURE OF THE ARABIDOPSIS THALIANA TELOMERIC REPEAT-BINDING PROTEIN DNA BINDING DOMAIN
(-)
Protein domain: v-Myb (1)
(-)
Avian myeloblastosis virus [TaxId: 11866] (1)
1H8AC:87-143; C:144-191CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3
(-)
Family: Nanomeric phage protein-like (1)
(-)
Protein domain: Phage protein BC1890 (1)
(-)
Bacillus cereus [TaxId: 1396] (1)
2AO9A:13-132; B:; C:; D:; E:; F:; G:; H:; I:STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF A PHAGE PROTEIN (PHBC6A51) FROM BACILLUS CEREUS ATCC 14579
(-)
Family: Paired domain (4)
(-)
Protein domain: Paired protein (prd) (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1PDNC:2-66; C:67-124CRYSTAL STRUCTURE OF A PAIRED DOMAIN-DNA COMPLEX AT 2.5 ANGSTROMS RESOLUTION REVEALS STRUCTURAL BASIS FOR PAX DEVELOPMENTAL MUTATIONS
(-)
Protein domain: Pax-5 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1K78A:19-81; A:82-142; E:19-81; E:82-142; I:84-141PAX5(1-149)+ETS-1(331-440)+DNA
1MDMA:19-81; A:82-142INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
(-)
Protein domain: Pax-6 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
6PAXA:1-68; A:69-133CRYSTAL STRUCTURE OF THE HUMAN PAX-6 PAIRED DOMAIN-DNA COMPLEX REVEALS A GENERAL MODEL FOR PAX PROTEIN-DNA INTERACTIONS
(-)
Family: Psq domain (1)
(-)
Protein domain: Ligand-dependent corepressor (LCoR) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2COBA:8-70SOLUTION STRUCTURES OF THE HTH DOMAIN OF HUMAN LCOR PROTEIN
(-)
Family: Recombinase DNA-binding domain (20)
(-)
Protein domain: gamma,delta resolvase (C-terminal domain) (6)
(-)
Escherichia coli [TaxId: 562] (6)
1GDTA:141-183; B:141-183CRYSTAL STRUCTURE OF A SITE-SPECIFIC RECOMBINASE, GAMMA-DELTA RESOLVASE COMPLEXED WITH A 34 BP CLEAVAGE SITE
1RESA:DETERMINATION OF THE STRUCTURE OF THE DNA BINDING DOMAIN OF GAMMA DELTA RESOLVASE IN SOLUTION
1RETA:DETERMINATION OF THE STRUCTURE OF THE DNA BINDING DOMAIN OF GAMMA DELTA RESOLVASE IN SOLUTION
1ZR2A:141-183; B:141-183STRUCTURE OF A SYNAPTIC GAMMA-DELTA RESOLVASE TETRAMER COVALENTLY LINKED TO TWO CLEAVED DNAS
1ZR4A:141-183; B:141-183; D:141-183; E:141-183STRUCTURE OF A SYNAPTIC GAMMA-DELTA RESOLVASE TETRAMER COVALENTLY LINKED TO TWO CLEAVED DNAS
2GM4A:141-183; B:141-183AN ACTIVATED, TETRAMERIC GAMMA-DELTA RESOLVASE: HIN CHIMAERA BOUND TO CLEAVED DNA
(-)
Protein domain: HIN recombinase (DNA-binding domain) (8)
(-)
Synthetic (8)
1HCRA:HIN RECOMBINASE BOUND TO DNA: THE ORIGIN OF SPECIFICITY IN MAJOR AND MINOR GROOVE INTERACTIONS
1IJWC:TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS.
1JJ6C:TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS.
1JJ8C:TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS
1JKOC:TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS
1JKPC:TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS
1JKQC:TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS
1JKRC:TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS
(-)
Protein domain: Ibeta subdomain of the mu end DNA-binding domain of phage mu transposase (2)
(-)
Bacteriophage Mu [TaxId: 10677] (2)
2EZKA:SOLUTION NMR STRUCTURE OF THE IBETA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF PHAGE MU TRANSPOSASE, REGULARIZED MEAN STRUCTURE
2EZLA:SOLUTION NMR STRUCTURE OF THE IBETA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF PHAGE MU TRANSPOSASE, 29 STRUCTURES
(-)
Protein domain: Transposase (2)
(-)
Bacteriophage Mu [TaxId: 10677] (2)
2EZHA:SOLUTION NMR STRUCTURE OF THE IGAMMA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF MU PHAGE TRANSPOSASE, MINIMIZED AVERAGE STRUCTURE
2EZIA:SOLUTION NMR STRUCTURE OF THE IGAMMA SUBDOMAIN OF THE MU END DNA BINDING DOMAIN OF MU PHAGE TRANSPOSASE, 30 STRUCTURES
(-)
Protein domain: Transposase tc3a1-65 (2)
(-)
Nematode (Caenorhabditis elegans) [TaxId: 6239] (2)
1TC3C:TRANSPOSASE TC3A1-65 FROM CAENORHABDITIS ELEGANS
1U78A:2-54; A:55-104STRUCTURE OF THE BIPARTITE DNA-BINDING DOMAIN OF TC3 TRANSPOSASE BOUND TO TRANSPOSON DNA
(-)
Family: RpiR-like (1)
(-)
Protein domain: Putative transcriptional regulator YbbH (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
2O3FA:1-83; B:; C:STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PUTATIVE TRANSCRIPTIONAL REGULATOR YBBH FROM BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168.
(-)
Family: SLIDE domain (1)
(-)
Protein domain: SLIDE domain of the nucleosome remodeling ATPase ISWI (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1OFCX:851-978NUCLEOSOME RECOGNITION MODULE OF ISWI ATPASE
(-)
Family: SWIRM domain (14)
(-)
Protein domain: automated matches (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2L3DA:THE SOLUTION STRUCTURE OF THE SHORT FORM SWIRM DOMAIN OF LSD1
(-)
Protein domain: Lysine-specific histone demethylase 1, LSD1 (9)
(-)
Human (Homo sapiens) [TaxId: 9606] (9)
2COMA:8-118THE SOLUTION STRUCTURE OF THE SWIRM DOMAIN OF HUMAN LSD1
2DW4A:172-273CRYSTAL STRUCTURE OF HUMAN LSD1 AT 2.3 A RESOLUTION
2EJRA:172-273LSD1-TRANYLCYPROMINE COMPLEX
2H94A:172-273CRYSTAL STRUCTURE AND MECHANISM OF HUMAN LYSINE-SPECIFIC DEMETHYLASE-1
2IW5A:171-273STRUCTURAL BASIS FOR COREST-DEPENDENT DEMETHYLATION OF NUCLEOSOMES BY THE HUMAN LSD1 HISTONE DEMETHYLASE
2UXNA:173-273STRUCTURAL BASIS OF HISTONE DEMETHYLATION BY LSD1 REVEALED BY SUICIDE INACTIVATION
2UXXA:171-273HUMAN LSD1 HISTONE DEMETHYLASE-COREST IN COMPLEX WITH AN FAD-TRANYLCYPROMINE ADDUCT
2Z3YA:172-273CRYSTAL STRUCTURE OF LYSINE-SPECIFIC DEMETHYLASE1
2Z5UA:172-273CRYSTAL STRUCTURE OF LYSINE-SPECIFIC HISTONE DEMETHYLASE 1
(-)
Protein domain: Transcription regulatory protein swi3 (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
2FQ3A:311-395STRUCTURE AND FUNCTION OF THE SWIRM DOMAIN, A CONSERVED PROTEIN MODULE FOUND IN CHROMATIN REGULATORY COMPLEXES
(-)
Protein domain: Transcriptional adaptor 2-like, TADA2L (3)
(-)
Mouse (Mus musculus) [TaxId: 10090] (3)
2AQEA:2-90STRUCTURAL AND FUNCTIONAL ANALYSIS OF ADA2 ALPHA SWIRM DOMAIN
2AQFA:STRUCTURAL AND FUNCTIONAL ANALYSIS OF ADA2 ALPHA SWIRM DOMAIN
2CUJA:8-108SOLUTION STRUCTURE OF SWIRM DOMAIN OF MOUSE TRANSCRIPTIONAL ADAPTOR 2-LIKE
(-)
Family: Tetracyclin repressor-like, N-terminal domain (97)
(-)
Protein domain: A-factor receptor homolog CprB (2)
(-)
Streptomyces coelicolor [TaxId: 1902] (2)
1UI5A:5-75; B:5-75CRYSTAL STRUCTURE OF GAMMA-BUTYROLACTONE RECEPTOR (ARPA LIKE PROTEIN)
1UI6A:5-75; B:6-75CRYSTAL STRUCTURE OF GAMMA-BUTYROLACTONE RECEPTOR (ARPA-LIKE PROTEIN)
(-)
Protein domain: automated matches (2)
(-)
Bacillus cereus [TaxId: 1396] (2)
2JJ7A:3-76; B:1-76CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 170-185 SUBSTITUTED BY ALANINE
2JK3A:4-76; B:4-76CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169-186 SUBSTITUTED BY GSSGSSG LINKER
(-)
Protein domain: Ethr repressor (5)
(-)
Mycobacterium tuberculosis [TaxId: 1773] (5)
1T56A:22-94CRYSTAL STRUCTURE OF TETR FAMILY REPRESSOR M. TUBERCULOSIS ETHR
1U9NA:22-94CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR ETHR IN A LIGAND BOUND CONFORMATION OPENS THERAPEUTIC PERSPECTIVES AGAINST TUBERCULOSIS AND LEPROSY
1U9OA:22-94CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR ETHR IN A LIGAND BOUND CONFORMATION
3TP0A:24-93STRUCTURAL ACTIVATION OF THE TRANSCRIPTIONAL REPRESSOR ETHR FROM M. TUBERCULOSIS BY SINGLE AMINO-ACID CHANGE MIMICKING NATURAL AND SYNTHETIC LIGANDS
3TP3A:22-94STRUCTURE OF HTH-TYPE TRANSCRIPTIONAL REGULATOR ETHR, G106W MUTANT
(-)
Protein domain: Hemolysin II regulatory protein, HlyIIR (1)
(-)
Bacillus cereus [TaxId: 1396] (1)
2FX0A:4-76CRYSTAL STRUCTURE OF HLYIIR, A HEMOLYSIN II TRANSCRIPTIONAL REGULATOR
(-)
Protein domain: Hypothetical transcriptional regulator YcdC (2)
(-)
Escherichia coli [TaxId: 562] (2)
3LOCA:11-85; B:11-85; C:12-85; D:11-85CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTIONAL REGULATOR YCDC
4JYKA:12-86; B:17-86STRUCTURE OF E. COLI TRANSCRIPTIONAL REGULATOR RUTR WITH BOUND URACIL
(-)
Protein domain: Hypothetical transcriptional regulator YfiR (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1RKTA:2-82; B:6-82CRYSTAL STRUCTURE OF YFIR, A PUTATIVE TRANSCRIPTIONAL REGULATOR FROM BACILLUS SUBTILIS
(-)
Protein domain: Hypothetical transcriptional regulator YsiA (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1VI0A:6-77; B:6-77CRYSTAL STRUCTURE OF A TRANSCRIPTIONAL REGULATOR
(-)
Protein domain: Multidrug binding protein QacR (24)
(-)
Staphylococcus aureus [TaxId: 1280] (24)
1JT0A:2-72; B:2-72; C:2-72; D:2-72CRYSTAL STRUCTURE OF A COOPERATIVE QACR-DNA COMPLEX
1JT6A:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING PROTEIN QACR BOUND TO DEQUALINIUM
1JTXA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REGULATOR QACR BOUND TO CRYSTAL VIOLET
1JTYA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REGULATOR QACR BOUND TO ETHIDIUM
1JUMA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO THE NATURAL DRUG BERBERINE
1JUPA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO MALACHITE GREEN
1JUSA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO RHODAMINE 6G
1QVTA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO THE DRUG PROFLAVINE
1QVUA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO TWO DRUGS: ETHIDIUM AND PROFLAVINE
1RKWA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO PENTAMADINE
1RPWA:2-72; B:2-72; C:2-72; D:2-72CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING PROTEIN QACR BOUND TO THE DIAMIDINE HEXAMIDINE
2DTZA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF MULTIDRUG BINDING PROTEIN QACR FROM STAPHYLOCOCCUS AUREUS COCRYSTALLIZED WITH COMPOUND DB75
2G0EA:2-72; B:2-72; D:2-72; E:2-72STRUCTURE OF QACR MULTIDRUG TRANSCRIPTIONAL REGULATOR BOUND TO TRIVALENT AND BIVALENT DIAMIDINE DRUGS
2GBYA:2-72; B:2-72; D:2-72; E:2-72STRUCTURE OF QACR MULTIDRUG TRANSCRIPTIONAL REGULATOR BOUND TO BIVALENT DIAMIDINE BERENIL
2HQ5A:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF MULTIDRUG BINDING PROTEIN QACR FROM STAPHYLOCOCCUS AUREUS COCRYSTALLIZED WITH COMPOUND DB359
3BR0A:2-72; B:4-72CRYSTAL STRUCTURE OF THE COMPLEX OF MALACHITE GREEN BOUND TO QACR(E120Q), A MUTANT OF A MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR
3BR3A:3-72; B:4-72CRYSTAL STRUCTURE OF THE COMPLEX OF ETHIDIUM BOUND TO QACR(E90Q), A MUTANT OF A MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR
3BR5A:2-72; B:3-72; D:4-72; E:2-72CRYSTAL STRUCTURE OF THE COMPLEX OF RHODAMINE 6G BOUND TO QACR(E90Q), A MUTANT OF A MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR
3BT9A:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF QACR(E57Q) BOUND TO DEQUALINIUM
3BTCA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF QACR(E57Q) BOUND TO MALACHITE GREEN
3BTIA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF QACR(E58Q) BOUND TO BERBERINE
3BTJA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF QACR(E58Q) BOUND TO DEQUALINIUM
3BTLA:2-72; B:2-72; D:2-72; E:2-72CRYSTAL STRUCTURE OF QACR(E58Q) BOUND TO MALACHITE GREEN
3PM1A:3-72; B:1-72STRUCTURE OF QACR E90Q BOUND TO ETHIDIUM
(-)
Protein domain: Probable transcriptional regulator PA1836 (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2GENA:6-75STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF A PROBABLE TRANSCRIPTIONAL REGULATOR FROM PSEUDOMONAS AERUGINOSA PAO1
(-)
Protein domain: Probable transcriptional regulator PA3133 (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2FD5A:1-76THE CRYSTAL STRUCTURE OF A TRANSCRIPTIONAL REGULATOR FROM PSEUDOMONAS AERUGINOSA PAO1
(-)
Protein domain: Probable transcriptional regulator RHA1_ro04631 (1)
(-)
Rhodococcus sp. RHA1 [TaxId: 101510] (1)
2GFNA:4-80; B:7-80CRYSTAL STRUCTURE OF HTH-TYPE TRANSCRIPTIONAL REGULATOR PKSA RELATED PROTEIN FROM RHODOCOCCUS SP. RHA1
(-)
Protein domain: Putative regulator SCO4008 (1)
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
2D6YA:7-74; B:5-74CRYSTAL STRUCTURE OF TRANSCRIPTIONAL FACTOR SCO4008 FROM STREPTOMYCES COELICOLOR A3(2)
(-)
Protein domain: Putative regulatory protein Sco4313 (1)
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
2OI8A:8-86CRYSTAL STRUCTURE OF PUTATIVE REGULATORY PROTEIN SCO4313
(-)
Protein domain: Putative transcriptional regulator (1)
(-)
Rhodococcus sp. RHA1 [TaxId: 101510] (1)
2G3BA:2-73; B:2-73CRYSTAL STRUCTURE OF PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR FROM RHODOCOCCUS SP.
(-)
Protein domain: Putative transcriptional regulator Atu0279 (1)
(-)
Agrobacterium tumefaciens [TaxId: 358] (1)
2G7SA:3-76THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR, TETR FAMILY, FROM AGROBACTERIUM TUMEFACIENS
(-)
Protein domain: Putative transcriptional regulator Rha04620 (1)
(-)
Rhodococcus sp. RHA1 [TaxId: 101510] (1)
2G7GA:9-73THE CRYSTAL STRUCTURE OF THE PUTATIVE TRANSCRIPTIONAL REGULATOR RHA04620 FROM RHODOCOCCUS SP. RHA1
(-)
Protein domain: Putative transcriptional regulator RHA1_ro03468 (1)
(-)
Rhodococcus sp. RHA1 [TaxId: 101510] (1)
2HKUA:18-87; B:19-87STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR FROM RHODOCOCCUS SP. RHA1
(-)
Protein domain: Putative transcriptional regulator RHA1_ro09068 (1)
(-)
Rhodococcus sp. [TaxId: 1831] (1)
2I10A:10-78; B:11-78PUTATIVE TETR TRANSCRIPTIONAL REGULATOR FROM RHODOCOCCUS SP. RHA1
(-)
Protein domain: Putative transcriptional regulator SCO0857 (1)
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
2NP3A:35-99; B:22-99CRYSTAL STRUCTURE OF TETR-FAMILY REGULATOR (SCO0857) FROM STREPTOMYCES COELICOLOR A3.
(-)
Protein domain: Putative transcriptional regulator SCO4850 (1)
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
3C07A:15-89; B:16-89CRYSTAL STRUCTURE OF A TETR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR A3(2)
(-)
Protein domain: Putative transcriptional regulator SCO4940 (1)
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
2HYJA:8-82THE CRYSTAL STRUCTURE OF A TETR-FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR
(-)
Protein domain: Putative transcriptional regulator SCO5951 (1)
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
2ID3A:13-80; B:14-80CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR SCO5951 FROM STREPTOMYCES COELICOLOR A3(2)
(-)
Protein domain: Putative transcriptional regulator SCO7704 (1)
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
2G7LA:16-83CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTION REGULATOR SCO7704 FROM STREPTOMYCES COELICOR
(-)
Protein domain: Putative transcriptional regulator YxaF (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1SGMA:5-77; B:5-77CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN YXAF
(-)
Protein domain: Putative transcriptional repressor YbiH (1)
(-)
Salmonella typhimurium [TaxId: 90371] (1)
1T33A:1-88; B:7-88STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REPRESSOR (TETR/ACRR FAMILY) FROM SALMONELLA TYPHIMURIM LT2
(-)
Protein domain: Tetracyclin repressor (Tet-repressor, TetR) (24)
(-)
Escherichia coli [TaxId: 562] (24)
1A6IA:2-67TET REPRESSOR, CLASS D VARIANT
1BJ0  [entry was replaced by entry 4V2F without any SCOP domain information]
1BJY  [entry was replaced by entry 4V2G without any SCOP domain information]
1BJZA:2-67TETRACYCLINE CHELATED MG2+-ION INITIATES HELIX UNWINDING FOR TET REPRESSOR INDUCTION
1ORKA:2-67TET REPRESSOR, CLASS D IN COMPLEX WITH 9-(N,N-DIMETHYLGLYCYLAMIDO)-6-DEMETHYL-6-DEOXY-TETRACYCLINE
1QPIA:4-67CRYSTAL STRUCTURE OF TETRACYCLINE REPRESSOR/OPERATOR COMPLEX
2FJ1A:2-67CRYSTAL STRUCTURE ANALYSIS OF TET REPRESSOR (CLASS D) IN COMPLEX WITH 7-CHLORTETRACYCLINE-NICKEL(II)
2NS7A:5-67; B:3-67; C:7-67; D:4-67HOW AN IN VITRO SELECTED PEPTIDE MIMICS THE ANTIBIOTIC TETRACYCLINE TO INDUCE TET REPRESSOR
2O7OA:2-67CRYSTAL STRUCTURE ANALYSIS OF TETR(D) COMPLEX WITH DOXYCYCLINE
2TCTA:2-67THE COMPLEX FORMED BETWEEN TET REPRESSOR AND TETRACYCLINE-MG2+ REVEALS MECHANISM OF ANTIBIOTIC RESISTANCE
2TRTA:2-67TETRACYCLINE REPRESSOR CLASS D
2VKEA:2-67TET REPRESSOR CLASS D COMPLEXED WITH COBALT AND TETRACYCLINE
2X6OA:2-67TET REPRESSOR CLASS D IN COMPLEX WITH 7-CHLOR-2-CYANO-ISO-TETRACYCLINE
2X9DA:2-67TET REPRESSOR (CLASS D) IN COMPLEX WITH ISO-7 CHLORTETRACYCLINE
2XB5A:2-67TET REPRESSOR (CLASS D) IN COMPLEX WITH 7-IODOTETRACYCLINE
2XPS  [entry was replaced by entry 4D7M without any SCOP domain information]
2XPT  [entry was replaced by entry 4D7N without any SCOP domain information]
2XPUA:2-67TETR(D) IN COMPLEX WITH ANHYDROTETRACYCLINE.
2XPVA:2-67TETR(D) IN COMPLEX WITH MINOCYCLINE AND MAGNESIUM.
2XPWA:2-67TETR(D) IN COMPLEX WITH OXYTETRACYCLINE AND MAGNESIUM.
3FK6A:4-67; B:3-67CRYSTAL STRUCTURE OF TETR TRIPLE MUTANT (H64K, S135L, S138I)
3FK7A:4-67; B:4-67CRYSTAL STRUCTURE OF TETR TRIPLE MUTANT (H64K, S135L, S138I) IN COMPLEX WITH 4-DDMA-ATC
4ABZA:2-67TETR(D) IN COMPLEX WITH TIGECYCLINE AND MAGNESIUM
4AUXA:2-67TET REPRESSOR CLASS D IN COMPLEX WITH 9-NITROTETRACYCLINE
(-)
Protein domain: Transcriptional activator DhaS (1)
(-)
Lactococcus lactis [TaxId: 1358] (1)
2IU5A:1-71; B:4-71DIHYDROXYACETONE KINASE OPERON ACTIVATOR DHAS
(-)
Protein domain: Transcriptional regulator BC3163 (1)
(-)
Bacillus cereus [TaxId: 1396] (1)
2FQ4A:9-77THE CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR (TETR FAMILY) FROM BACILLUS CEREUS
(-)
Protein domain: Transcriptional regulator BC5000 (1)
(-)
Bacillus cereus [TaxId: 1396] (1)
1ZK8A:6-77; B:8-77CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR FROM BACILLUS CEREUS ATCC 14579
(-)
Protein domain: Transcriptional regulator Cgl1640/Cg1846 (1)
(-)
Corynebacterium glutamicum [TaxId: 1718] (1)
2O7TA:1-78CRYSTAL STRUCTURE OF A TETR FAMILY TRANSCRIPTIONAL REGULATOR (NCGL1578, CGL1640) FROM CORYNEBACTERIUM GLUTAMICUM AT 2.10 A RESOLUTION
(-)
Protein domain: Transcriptional regulator Cgl2612 (3)
(-)
Corynebacterium glutamicum [TaxId: 1718] (3)
2YVEA:1-74; B:3-74CRYSTAL STRUCTURE OF THE METHYLENE BLUE-BOUND FORM OF THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR
2ZOYA:1-74; B:3-74THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR (CGL2612 PROTEIN) FROM C.GLUTAMICUM
2ZOZA:3-73; B:1-73CRYSTAL STRUCTURE OF THE ETHIDIUM-BOUND FORM OF THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR
(-)
Protein domain: Transcriptional regulator EF0787 (1)
(-)
Enterococcus faecalis [TaxId: 1351] (1)
1Z0XA:4-71; B:3-71CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR, TETR FAMILY FROM ENTEROCOCCUS FAECALIS V583
(-)
Protein domain: Transcriptional regulator PsrA (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2FBQA:2-80THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR PA3006
(-)
Protein domain: Transcriptional regulator RHA1_ro04179 (1)
(-)
Rhodococcus sp. [TaxId: 1831] (1)
2NP5A:9-77; B:9-77; C:10-77; D:10-77CRYSTAL STRUCTURE OF A TRANSCRIPTIONAL REGULATOR (RHA1_RO04179) FROM RHODOCOCCUS SP. RHA1.
(-)
Protein domain: Transcriptional regulator TM1030 (8)
(-)
Thermotoga maritima [TaxId: 2336] (8)
1Z77A:1-75CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR PROTEIN FROM THERMOTOGA MARITIMA.
1ZKGA:2-75; B:2-75CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR, TETR FAMILY (TM1030) FROM THERMOTOGA MARITIMA AT 2.30 A RESOLUTION
2ID6A:-1-75CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR (TM1030) AT 1.75A RESOLUTION
2IEKA:2-75NEW CRYSTAL FORM OF TRANSCRIPTIONAL REGULATOR TM1030 FROM THERMOTOGA MARITIMA
3IH2A:0-75TM1030 CRYSTALLIZED AT 323K
3IH3A:-1-75TM1030 CRYSTALLIZED AT 310K
3IH4A:-1-75TM1030 CRYSTALLIZED AT 277K
4I76A:3-75; B:1-75CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR TM1030 WITH OCTANOL
(-)
Superfamily: KorB DNA-binding domain-like (2)
(-)
Family: KorB DNA-binding domain-like (2)
(-)
Protein domain: Putative partitioning protein ParB/Spo0J (1)
(-)
Thermus thermophilus [TaxId: 274] (1)
1VZ0A:116-208; B:116-208; C:116-208; D:116-208; E:116-208; F:116-208; G:116-208; H:116-208CHROMOSOME SEGREGATION PROTEIN SPO0J FROM THERMUS THERMOPHILUS
(-)
Protein domain: Transcriptional repressor protein KorB DNA-binding domain (1)
(-)
Escherichia coli [TaxId: 562] (1)
1R71A:; B:; C:; D:CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF KORB IN COMPLEX WITH THE OPERATOR DNA
(-)
Superfamily: Methylated DNA-protein cysteine methyltransferase, C-terminal domain (12)
(-)
Family: automated matches (3)
(-)
Protein domain: automated matches (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
3KZYA:92-179; B:92-179CRYSTAL STRUCTURE OF SNAP-TAG
3KZZA:92-179CRYSTAL STRUCTURE OF SNAP-TAG BOUND TO ITS SUBSTRATE BENZYLGUANINE
3L00A:92-179CRYSTAL STRUCTURE OF BENZYLATED SNAP-TAG
(-)
Family: Methylated DNA-protein cysteine methyltransferase, C-terminal domain (9)
(-)
Protein domain: Ada DNA repair protein (1)
(-)
Escherichia coli [TaxId: 562] (1)
1SFEA:93-176ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI
(-)
Protein domain: O6-alkylguanine-DNA alkyltransferase (8)
(-)
Human (Homo sapiens) [TaxId: 9606] (7)
1EH6A:92-181HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE
1EH7A:92-176METHYLATED HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE
1EH8A:92-179BENZYLATED HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE
1QNTA:92-176X-RAY STRUCTURE OF HUMAN O6ALKYLGUANINE-DNA ALKYLTRANSFERASE
1T38A:92-176HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING O6-METHYLGUANINE
1T39A:92-175; B:92-174HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE COVALENTLY CROSSLINKED TO DNA
1YFHA:92-179; B:92-175; C:92-177WT HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING AN ALKYLATED CYTOSINE
(-)
Pyrococcus kodakaraensis [TaxId: 311400] (1)
1MGTA:89-169CRYSTAL STRUCTURE OF O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM HYPERTHERMOPHILIC ARCHAEON PYROCOCCUS KODAKARAENSIS STRAIN KOD1
(-)
Superfamily: N-terminal Zn binding domain of HIV integrase (8)
(-)
Family: N-terminal Zn binding domain of HIV integrase (8)
(-)
Protein domain: N-terminal Zn binding domain of HIV integrase (8)
(-)
Human immunodeficiency virus type 1 [TaxId: 11676] (7)
1K6YA:1-46; B:1-46; C:1-46; D:1-46CRYSTAL STRUCTURE OF A TWO-DOMAIN FRAGMENT OF HIV-1 INTEGRASE
1WJAA:; B:SOLUTION STRUCTURE OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE (D FORM), NMR, REGULARIZED MEAN STRUCTURE
1WJBA:; B:SOLUTION STRUCTURE OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE (D FORM), NMR, 40 STRUCTURES
1WJCA:; B:SOLUTION STRUCTURE OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE (E FORM), NMR, REGULARIZED MEAN STRUCTURE
1WJDA:; B:SOLUTION STRUCTURE OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE (E FORM), NMR, 38 STRUCTURES
1WJEA:; B:SOLUTION STRUCTURE OF H12C MUTANT OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE COMPLEXED TO CADMIUM, NMR, MINIMIZED AVERAGE STRUCTURE
1WJFA:; B:SOLUTION STRUCTURE OF H12C MUTANT OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE COMPLEXED TO CADMIUM, NMR, 40 STRUCTURES
(-)
Human immunodeficiency virus type 2 [TaxId: 11709] (1)
1E0EA:; B:N-TERMINAL ZINC-BINDING HHCC DOMAIN OF HIV-2 INTEGRASE
(-)
Superfamily: Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (3)
(-)
Family: Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (3)
(-)
Protein domain: Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (3)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1WHUA:SOLUTION STRUCTURE OF THE ALPHA-HELICAL DOMAIN FROM MOUSE HYPOTHETICAL PNPASE
(-)
Streptomyces antibioticus [TaxId: 1890] (2)
1E3HA:263-345SEMET DERIVATIVE OF STREPTOMYCES ANTIBIOTICUS PNPASE/GPSI ENZYME
1E3PA:263-345TUNGSTATE DERIVATIVE OF STREPTOMYCES ANTIBIOTICUS PNPASE/ GPSI ENZYME
(-)
Superfamily: Ribosomal protein L11, C-terminal domain (96)
(-)
Family: Ribosomal protein L11, C-terminal domain (96)
(-)
Protein domain: Ribosomal protein L11, C-terminal domain (96)
(-)
Bacillus stearothermophilus [TaxId: 1422] (8)
1ACIA:L11 RIBOSOMAL PROTEIN RNA BINDING DOMAIN, NMR, 20 STRUCTURES
1FOWA:NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, MINIMIZED AVERAGE STRUCTURE
1FOXA:NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, 33 STRUCTURES
1FOYA:THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11: THREE-DIMENSIONAL STRUCTURE OF THE RNA-BOUND FORM OF THE PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
1HC8A:; B:CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
1QA6A:; B:CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
1Y39A:2-75; B:205-275CO-EVOLUTION OF PROTEIN AND RNA STRUCTURES WITHIN A HIGHLY CONSERVED RIBOSOMAL DOMAIN
2FOWA:THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11: THREE-DIMENSIONAL STRUCTURE OF THE RNA-BOUND FORM OF THE PROTEIN, NMR, 26 STRUCTURES
(-)
Deinococcus radiodurans [TaxId: 1299] (4)
1XBPG:72-143INHIBITION OF PEPTIDE BOND FORMATION BY PLEUROMUTILINS: THE STRUCTURE OF THE 50S RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS IN COMPLEX WITH TIAMULIN
2ZJPF:72-144THIOPEPTIDE ANTIBIOTIC NOSIHEPTIDE BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
2ZJQF:72-144INTERACTION OF L7 WITH L11 INDUCED BY MICROCCOCIN BINDING TO THE DEINOCOCCUS RADIODURANS 50S SUBUNIT
3CF5F:72-144THIOPEPTIDE ANTIBIOTIC THIOSTREPTON BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
(-)
Escherichia coli [TaxId: 562] (29)
2J28I:73-141MODEL OF E. COLI SRP BOUND TO 70S RNCS
2RDOI:73-14150S SUBUNIT WITH EF-G(GDPNP) AND RRF BOUND
3DEGH:73-141COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP
(-)
Haloarcula marismortui [TaxId: 2238] (39)
1S72I:REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
1VQ4I:71-140THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ5I:71-140THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ6I:71-140THE STRUCTURE OF C-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ7I:71-140THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ8I:71-140THE STRUCTURE OF CCDA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ9I:71-140THE STRUCTURE OF CCA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQKI:71-140THE STRUCTURE OF CCDA-PHE-CAP-BIO BOUND TO THE A SITE OF THE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQLI:71-140THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCSN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQMI:71-140THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQNI:71-140THE STRUCTURE OF CC-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQOI:71-140THE STRUCTURE OF CCPMN BOUND TO THE LARGE RIBOSOMAL SUBUNIT HALOARCULA MARISMORTUI
1VQPI:71-140THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAP" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YHQI:66-135CRYSTAL STRUCTURE OF AZITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YI2I:66-135CRYSTAL STRUCTURE OF ERYTHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YIJI:66-135CRYSTAL STRUCTURE OF TELITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YITI:66-135CRYSTAL STRUCTURE OF VIRGINIAMYCIN M AND S BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJ9I:66-135CRYSTAL STRUCTURE OF THE MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI CONTAINING A THREE RESIDUE DELETION IN L22
1YJNI:66-135CRYSTAL STRUCTURE OF CLINDAMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJWI:66-135CRYSTAL STRUCTURE OF QUINUPRISTIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
2OTJI:71-14013-DEOXYTEDANOLIDE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
2OTLI:71-140GIRODAZOLE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
2QA4I:67-130A MORE COMPLETE STRUCTURE OF THE THE L7/L12 STALK OF THE HALOARCULA MARISMORTUI 50S LARGE RIBOSOMAL SUBUNIT
2QEXI:71-134NEGAMYCIN BINDS TO THE WALL OF THE NASCENT CHAIN EXIT TUNNEL OF THE 50S RIBOSOMAL SUBUNIT
3CC2I:66-129THE REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION WITH RRNA SEQUENCE FOR THE 23S RRNA AND GENOME-DERIVED SEQUENCES FOR R-PROTEINS
3CC4I:66-129CO-CRYSTAL STRUCTURE OF ANISOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
3CC7I:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION C2487U
3CCEI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION U2535A
3CCJI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION C2534U
3CCLI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION U2535C. DENSITY FOR ANISOMYCIN IS VISIBLE BUT NOT INCLUDED IN MODEL.
3CCMI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2611U
3CCQI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION A2488U
3CCRI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION A2488C. DENSITY FOR ANISOMYCIN IS VISIBLE BUT NOT INCLUDED IN THE MODEL.
3CCSI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2482A
3CCUI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2482C
3CCVI:66-129STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2616A
3CD6I:66-129CO-CYSTAL OF LARGE RIBOSOMAL SUBUNIT MUTANT G2616A WITH CC-PUROMYCIN
3CMAI:66-129THE STRUCTURE OF CCA AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
3CMEI:66-129THE STRUCTURE OF CA AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
(-)
Thermotoga maritima [TaxId: 2336] (1)
1MMSA:71-140; B:CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX
(-)
Thermus thermophilus [TaxId: 274] (15)
2E34A:70-139L11 STRUCTURE WITH RDC AND RG REFINEMENT
2E35A:70-139THE MINIMIZED AVERAGE STRUCTURE OF L11 WITH RG REFINEMENT
2E36A:70-139L11 WITH SANS REFINEMENT
2H8WA:70-139SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN L11
2NXNB:70-139T. THERMOPHILUS RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (PRMA) IN COMPLEX WITH RIBOSOMAL PROTEIN L11
3CJQB:71-137; E:71-137; H:71-137RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (PRMA) IN COMPLEX WITH DIMETHYLATED RIBOSOMAL PROTEIN L11 IN SPACE GROUP P212121
3CJRB:71-137RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (PRMA) IN COMPLEX WITH RIBOSOMAL PROTEIN L11 (K39A) AND INHIBITOR SINEFUNGIN.
3CJTB:70-139; F:70-139; J:70-139; N:70-139RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (PRMA) IN COMPLEX WITH DIMETHYLATED RIBOSOMAL PROTEIN L11
(-)
Superfamily: Ribosomal protein S18 (71)
(-)
Family: Ribosomal protein S18 (71)
(-)
Protein domain: Ribosomal protein S18 (71)
(-)
Thermus thermophilus [TaxId: 274] (47)
1FJGR:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
1G1XC:; H:STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA
1HNWR:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
1HNXR:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
1HNZR:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
1HR0R:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1I94R:CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
1I95R:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
1I96R:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
1I97R:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
1J5ER:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT
1N32R:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N33R:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N34R:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
1N36R:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
1X18H:16-88CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT
1XMOR:CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
1XMQR:CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
1XNQR:STRUCTURE OF AN INOSINE-ADENINE WOBBLE BASE PAIR COMPLEX IN THE CONTEXT OF THE DECODING CENTER
1XNRR:CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
2E5LR:16-88A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
2F4VR:16-8830S RIBOSOME + DESIGNER ANTIBIOTIC
2HHHR:16-88CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
2UU9R:19-88STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUG-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUAR:19-88STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUC-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUBR:19-88STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUCR:19-88STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUA-CODON IN THE A-SITE AND PAROMOMYCIN.
2UXBR:19-88CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXCR:19-88CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXDR:19-88CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2VQER:16-88MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
2VQFR:16-88MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
(-)
Superfamily: RNA polymerase subunit RPB10 (37)
(-)
Family: RNA polymerase subunit RPB10 (37)
(-)
Protein domain: automated matches (7)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (5)
2NVQJ:RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH 2'DUTP
3CQZJ:CRYSTAL STRUCTURE OF 10 SUBUNIT RNA POLYMERASE II IN COMPLEX WITH THE INHIBITOR ALPHA-AMANITIN
3M3YJ:RNA POLYMERASE II ELONGATION COMPLEX C
3S1MJ:RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 1)
3S1NJ:RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3RZOJ:RNA POLYMERASE II INITIATION COMPLEX WITH A 4-NT RNA
(-)
Saccharomyces cerevisiae (1)
4C3IJ:STRUCTURE OF 14-SUBUNIT RNA POLYMERASE I AT 3.0 A RESOLUTION, CRYSTAL FORM C2-100
(-)
Protein domain: RNA polymerase subunit RPB10 (30)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (28)
1I3QJ:RNA POLYMERASE II CRYSTAL FORM I AT 3.1 A RESOLUTION
1I50J:RNA POLYMERASE II CRYSTAL FORM II AT 2.8 A RESOLUTION
1I6HJ:RNA POLYMERASE II ELONGATION COMPLEX
1K83J:CRYSTAL STRUCTURE OF YEAST RNA POLYMERASE II COMPLEXED WITH THE INHIBITOR ALPHA AMANITIN
1TWAJ:RNA POLYMERASE II COMPLEXED WITH ATP
1TWCJ:RNA POLYMERASE II COMPLEXED WITH GTP
1TWFJ:RNA POLYMERASE II COMPLEXED WITH UTP AT 2.3 A RESOLUTION
1TWGJ:RNA POLYMERASE II COMPLEXED WITH CTP
1TWHJ:RNA POLYMERASE II COMPLEXED WITH 2'DATP
2B63J:1-65COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX
2B8KJ:1-6512-SUBUNIT RNA POLYMERASE II
2E2HJ:1-65RNA POLYMERASE II ELONGATION COMPLEX AT 5 MM MG2+ WITH GTP
2E2IJ:1-65RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DGTP
2E2JJ:1-65RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH GMPCPP
2JA5J:1-65CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A
2JA6J:1-65CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B
2JA7J:1-65; V:1-65CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C
2JA8J:1-65CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
2NVTJ:1-65RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH GMPCPP
2NVXJ:1-65RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DUTP
2NVYJ:1-65RNA POLYMERASE II FORM II IN 150 MM MN+2
2NVZJ:1-65RNA POLYMERASE II ELONGATION COMPLEX WITH UTP, UPDATED 11/2006
2R7ZJ:1-65CISPLATIN LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX
2R92J:1-65ELONGATION COMPLEX OF RNA POLYMERASE II WITH ARTIFICIAL RDRP SCAFFOLD
2R93J:1-65ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP
2VUMJ:1-65ALPHA-AMANITIN INHIBITED COMPLETE RNA POLYMERASE II ELONGATION COMPLEX
2YU9J:1-65RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH UTP
4C2MJ:; Y:STRUCTURE OF RNA POLYMERASE I AT 2.8 A RESOLUTION
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3S14J:RNA POLYMERASE II INITIATION COMPLEX WITH A 6-NT RNA
(-)
Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
1EF4A:SOLUTION STRUCTURE OF THE ESSENTIAL RNA POLYMERASE SUBUNIT RPB10 FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
(-)
Superfamily: Rps17e-like (1)
(-)
Family: Rps17e-like (1)
(-)
Protein domain: ribosomal protein S17e (1)
(-)
Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
1RQ6A:SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S17E FROM METHANOBACTERIUM THERMOAUTOTROPHICUM, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT802 / ONTARIO CENTER FOR STRUCTURAL PROTEOMICS TARGET MTH0803
(-)
Superfamily: Sigma3 and sigma4 domains of RNA polymerase sigma factors (41)
(-)
Family: automated matches (4)
(-)
Protein domain: automated matches (4)
(-)
Thermus thermophilus HB8 [TaxId: 300852] (3)
3DXJF:258-318; P:258-318; P:319-422; F:319-422CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH THE ANTIBIOTIC MYXOPYRONIN
4G7HF:258-318; F:319-423; P:258-318; P:319-423CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX
4G7OF:258-318; F:319-423; P:258-318; P:319-423CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2 NT OF RNA
(-)
Thermus thermophilus [TaxId: 274] (1)
1ZYRF:258-318; F:319-423; P:258-318; P:319-423STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH THE ANTIBIOTIC STREPTOLYDIGIN
(-)
Family: Sigma3 domain (12)
(-)
Protein domain: Sigma factor SigA (1)
(-)
Thermus aquaticus [TaxId: 271] (1)
1KU2A:273-332; B:273-332CRYSTAL STRUCTURE OF THERMUS AQUATICUS RNA POLYMERASE SIGMA SUBUNIT FRAGMENT CONTAINING REGIONS 1.2 TO 3.1
(-)
Protein domain: Sigma factor sigma-28 (FliA) (2)
(-)
Aquifex aeolicus [TaxId: 63363] (2)
1RP3A:87-163; C:87-163; E:87-163; G:87-156COCRYSTAL STRUCTURE OF THE FLAGELLAR SIGMA/ANTI-SIGMA COMPLEX, SIGMA-28/FLGM
1SC5A:87-163SIGMA-28(FLIA)/FLGM COMPLEX
(-)
Protein domain: Sigma70 (9)
(-)
Thermus thermophilus [TaxId: 274] (9)
1IW7F:258-318; P:258-318CRYSTAL STRUCTURE OF THE RNA POLYMERASE HOLOENZYME FROM THERMUS THERMOPHILUS AT 2.6A RESOLUTION
1SMYF:258-318; P:258-318STRUCTURAL BASIS FOR TRANSCRIPTION REGULATION BY ALARMONE PPGPP
2A68F:258-318; P:258-318CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFABUTIN
2A69F:258-318; P:258-318CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFAPENTIN
2A6EF:258-318; P:258-318CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME
2A6HF:258-318; P:258-318CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC STERPTOLYDIGIN
2BE5F:258-318; P:258-318CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH INHIBITOR TAGETITOXIN
2CW0F:258-318; P:258-318CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE HOLOENZYME AT 3.3 ANGSTROMS RESOLUTION
3EQLF:258-318; P:258-318CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC MYXOPYRONIN
(-)
Family: Sigma4 domain (23)
(-)
Protein domain: automated matches (3)
(-)
Staphylococcus aureus [TaxId: 93061] (3)
4G6DA:G1 ORF67 / STAPHYLOCCUS AUREUS SIGMAA DOMAIN 4 COMPLEX
4G8XA:; C:G1 ORF67 / STAPHYLOCCUS AUREUS SIGMAA DOMAIN 4 COMPLEX
4G94A:G1 ORF67 / STAPHYLOCCUS AUREUS SIGMAA DOMAIN 4 COMPLEX
(-)
Protein domain: Sigma factor sigma-28 (FliA) (2)
(-)
Aquifex aeolicus [TaxId: 63363] (2)
1RP3A:164-234; C:164-235; E:164-236; G:167-236COCRYSTAL STRUCTURE OF THE FLAGELLAR SIGMA/ANTI-SIGMA COMPLEX, SIGMA-28/FLGM
1SC5A:168-233SIGMA-28(FLIA)/FLGM COMPLEX
(-)
Protein domain: Sigma70 (SigA, RpoD) (15)
(-)
Escherichia coli [TaxId: 562] (2)
1TLHB:T4 ASIA BOUND TO SIGMA70 REGION 4
2P7VB:CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI REGULATOR OF SIGMA 70, RSD, IN COMPLEX WITH SIGMA 70 DOMAIN 4
(-)
Thermotoga maritima [TaxId: 2336] (1)
1TTYA:SOLUTION STRUCTURE OF SIGMA A REGION 4 FROM THERMOTOGA MARITIMA
(-)
Thermus aquaticus [TaxId: 271] (3)
1KU3A:CRYSTAL STRUCTURE OF THERMUS AQUATICUS RNA POLYMERASE SIGMA SUBUNIT FRAGMENT, REGION 4
1KU7A:; D:CRYSTAL STRUCTURE OF THERMUS AQUATICS RNA POLYMERASE SIGMAA SUBUNIT REGION 4 BOUND TO-35 ELEMENT DNA
1RIOH:STRUCTURE OF BACTERIOPHAGE LAMBDA CI-NTD IN COMPLEX WITH SIGMA-REGION4 OF THERMUS AQUATICUS BOUND TO DNA
(-)
Thermus thermophilus [TaxId: 274] (9)
1IW7F:319-423; P:319-423CRYSTAL STRUCTURE OF THE RNA POLYMERASE HOLOENZYME FROM THERMUS THERMOPHILUS AT 2.6A RESOLUTION
1SMYF:319-423; P:319-423STRUCTURAL BASIS FOR TRANSCRIPTION REGULATION BY ALARMONE PPGPP
2A68F:319-423; P:319-423CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFABUTIN
2A69F:319-423; P:319-423CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFAPENTIN
2A6EF:319-423; P:319-423CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME
2A6HF:319-423; P:319-423CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC STERPTOLYDIGIN
2BE5F:319-423; P:319-423CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH INHIBITOR TAGETITOXIN
2CW0F:319-423; P:319-423CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE HOLOENZYME AT 3.3 ANGSTROMS RESOLUTION
3EQLF:319-423; P:319-423CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC MYXOPYRONIN
(-)
Protein domain: SigmaE factor (RpoE) (2)
(-)
Escherichia coli [TaxId: 562] (2)
1OR7A:120-187; B:120-190CRYSTAL STRUCTURE OF ESCHERICHIA COLI SIGMAE WITH THE CYTOPLASMIC DOMAIN OF ITS ANTI-SIGMA RSEA
2H27A:122-190; D:122-190CRYSTAL STRUCTURE OF ESCHERICHIA COLI SIGMAE REGION 4 BOUND TO ITS-35 ELEMENT DNA
(-)
Protein domain: SigmaF (1)
(-)
Bacillus stearothermophilus [TaxId: 1422] (1)
1L0OC:CRYSTAL STRUCTURE OF THE BACILLUS STEAROTHERMOPHILUS ANTI-SIGMA FACTOR SPOIIAB WITH THE SPORULATION SIGMA FACTOR SIGMAF
(-)
Family: YlxM/p13-like (2)
(-)
Protein domain: Hypothetical protein SAV1236 (1)
(-)
Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280] (1)
1XSVA:; B:X-RAY CRYSTAL STRUCTURE OF CONSERVED HYPOTHETICAL UPF0122 PROTEIN SAV1236 FROM STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50
(-)
Protein domain: Hypothetical protein SPy1201 (1)
(-)
Streptococcus pyogenes [TaxId: 1314] (1)
1S7OA:; B:; C:CRYSTAL STRUCTURE OF PUTATIVE DNA BINDING PROTEIN SP_1288 FROM STREPTOCOCCUS PYGENES
(-)
Superfamily: TrpR-like (20)
(-)
Family: automated matches (1)
(-)
Protein domain: automated matches (1)
(-)
Rhodobacter sphaeroides [TaxId: 1063] (1)
2JRTA:NMR SOLUTION STRUCTURE OF THE PROTEIN CODED BY GENE RHOS4_12090 OF RHODOBACTER SPHAEROIDES. NORTHEAST STRUCTURAL GENOMICS TARGET RHR5
(-)
Family: Chromosomal replication initiation factor DnaA C-terminal domain IV (3)
(-)
Protein domain: Chromosomal replication initiation factor DnaA C-terminal domain IV (3)
(-)
Aquifex aeolicus [TaxId: 63363] (2)
1L8QA:290-399CRYSTAL STRUCTURE OF DNA REPLICATION INITIATION FACTOR
2HCBA:290-399; B:290-399; C:290-399; D:290-399STRUCTURE OF AMPPCP-BOUND DNAA FROM AQUIFEX AEOLICUS
(-)
Escherichia coli [TaxId: 562] (1)
1J1VA:CRYSTAL STRUCTURE OF DNAA DOMAINIV COMPLEXED WITH DNAABOX DNA
(-)
Family: SPO1678-like (1)
(-)
Protein domain: Uncharacterized protein SPO1678 (1)
(-)
Silicibacter pomeroyi [TaxId: 89184] (1)
2OA4A:1-93SOLUTION NMR STRUCTURE: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SIR5
(-)
Family: Trp repressor, TrpR (15)
(-)
Protein domain: automated matches (1)
(-)
Escherichia coli [TaxId: 562] (1)
2XDIA:; B:TRYPTOPHAN REPRESSOR WITH L75F MUTATION IN ITS APO FORM (NO L-TRYPTOPHAN BOUND)
(-)
Protein domain: Trp repressor, TrpR (14)
(-)
Escherichia coli [TaxId: 562] (14)
1CO0A:; B:NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX
1JHGA:TRP REPRESSOR MUTANT V58I
1MI7R:CRYSTAL STRUCTURE OF DOMAIN SWAPPED TRP APOREPRESSOR IN 30%(V/V) ISOPROPANOL
1RCSA:; B:NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX
1TROA:; C:; E:; G:CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
1TRRA:; B:; D:; E:; G:; H:; J:; K:TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX
1WRPR:FLEXIBILITY OF THE DNA-BINDING DOMAINS OF TRP REPRESSOR
1WRSR:; S:NMR STUDY OF HOLO TRP REPRESSOR
1WRTR:; S:NMR STUDY OF APO TRP REPRESSOR
1ZT9A:; B:; D:; E:E. COLI TRP REPRESSOR, TETRAGONAL CRYSTAL FORM
2OZ9R:E. COLI TRP HOLOREPRESSOR, ORTHORHOMBIC CRYSTAL FORM
3SSWN:; R:E. COLI TRP APOREPRESSOR
3SSXN:; R:E. COLI TRP APOREPORESSOR L75F MUTANT
3WRPA:FLEXIBILITY OF THE DNA-BINDING DOMAINS OF TRP REPRESSOR
(-)
Superfamily: Winged helix DNA-binding domain (576)
(-)
Family: 39 kda initiator binding protein, IBP39, N-terminal domain (2)
(-)
Protein domain: 39 kda initiator binding protein, IBP39, N-terminal domain (2)
(-)
Trichomonas vaginalis [TaxId: 5722] (2)
1PP7U:CRYSTAL STRUCTURE OF THE T. VAGINALIS INITIATOR BINDING PROTEIN BOUND TO THE FERREDOXIN INR
1PP8F:; M:; O:; P:; U:; V:CRYSTAL STRUCTURE OF THE T. VAGINALIS IBP39 INITIATOR BINDING DOMAIN (IBD) BOUND TO THE ALPHA-SCS INR ELEMENT
(-)
Family: An Obfc1 domain (1)
(-)
Protein domain: OB fold-containing protein 1, Obfc1 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1WJ5A:SOLUTION STRUCTURE OF THE HYPOTHETICAL DOMAIN OF RIKEN CDNA 0610009H20
(-)
Family: Archaeal DNA-binding protein (2)
(-)
Protein domain: Sso10a (SSO10449) (2)
(-)
Sulfolobus solfataricus [TaxId: 2287] (2)
1R7JA:CRYSTAL STRUCTURE OF THE DNA-BINDING PROTEIN SSO10A FROM SULFOLOBUS SOLFATARICUS
1XSXA:; B:NMR STRUCTURE OF SSO10A, A HYPERTHERMOPHILE DNA-BINDING PROTEIN WITH AN EXTENDED ANTI-PARALLEL COILED COIL
(-)
Family: Arginine repressor (ArgR), N-terminal DNA-binding domain (5)
(-)
Protein domain: Arginine repressor (ArgR), N-terminal DNA-binding domain (5)
(-)
Bacillus stearothermophilus [TaxId: 1422] (1)
1B4AA:4-78; B:4-78; C:4-78; D:4-78; E:4-78; F:4-78STRUCTURE OF THE ARGININE REPRESSOR FROM BACILLUS STEAROTHERMOPHILUS
(-)
Bacillus subtilis [TaxId: 1423] (3)
1F9NA:3-78; B:1-78; C:2-78; D:4-78; E:2-78; F:1-78CRYSTAL STRUCTURE OF AHRC, THE ARGININE REPRESSOR/ACTIVATOR PROTEIN FROM BACILLUS SUBTILIS
2P5KA:CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF AHRC
2P5LC:2-64; H:2-64; D:2-64; G:2-64CRYSTAL STRUCTURE OF A DIMER OF N-TERMINAL DOMAINS OF AHRC IN COMPLEX WITH AN 18BP DNA OPERATOR SITE
(-)
Escherichia coli [TaxId: 562] (1)
1AOYA:N-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR NMR, 23 STRUCTURES
(-)
Family: ArsR-like transcriptional regulators (13)
(-)
Protein domain: automated matches (4)
(-)
Staphylococcus aureus [TaxId: 1280] (3)
2KJBA:; B:SOLUTION STRUCTURE OF CZRA IN THE DNA BOUND STATE
2KJCA:; B:SOLUTION STRUCTURE OF CZRA IN THE ZN(II) STATE
3F72A:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE STAPHYLOCOCCUS AUREUS PI258 CADC METAL BINDING SITE 2 MUTANT
(-)
Staphylococcus aureus [TaxId: 158879] (1)
4GGGA:; B:CRYSTAL STRUCTURE OF V66A/L68V CZRA IN THE ZN(II)BOUND STATE.
(-)
Protein domain: Cadmium efflux system accessory protein CadC (1)
(-)
Staphylococcus aureus [TaxId: 1280] (1)
1U2WA:12-119; B:; C:; D:CRYSTAL STRUCTURE OF THE STAPHYLOCOCCUS AUREUS PI258 CADC
(-)
Protein domain: Metal-sensing transcriptional repressor CzrA (3)
(-)
Staphylococcus aureus [TaxId: 1280] (3)
1R1UA:; B:; C:; D:CRYSTAL STRUCTURE OF THE METAL-SENSING TRANSCRIPTIONAL REPRESSOR CZRA FROM STAPHYLOCOCCUS AUREUS IN THE APO-FORM
1R1VA:; B:CRYSTAL STRUCTURE OF THE METAL-SENSING TRANSCRIPTIONAL REPRESSOR CZRA FROM STAPHYLOCOCCUS AUREUS IN THE ZN2-FORM
2M30A:; B:SOLUTION NMR REFINEMENT OF A METAL ION BOUND PROTEIN USING QUANTUM MECHANICAL/MOLECULAR MECHANICAL AND MOLECULAR DYNAMICS METHODS
(-)
Protein domain: Putative arsenical resistance operon repressor AF0168 (1)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (1)
1Y0UA:; B:CRYSTAL STRUCTURE OF THE PUTATIVE ARSENICAL RESISTANCE OPERON REPRESSOR FROM ARCHAEOGLOBUS FULGIDUS
(-)
Protein domain: SmtB repressor (4)
(-)
Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129] (4)
1R1TA:; B:CRYSTAL STRUCTURE OF THE CYANOBACTERIAL METALLOTHIONEIN REPRESSOR SMTB IN THE APO-FORM
1R22A:; B:CRYSTAL STRUCTURE OF THE CYANOBACTERIAL METALLOTHIONEIN REPRESSOR SMTB (C14S/C61S/C121S MUTANT) IN THE ZN2ALPHA5-FORM
1R23A:; B:CRYSTAL STRUCTURE OF THE CYANOBACTERIAL METALLOTHIONEIN REPRESSOR SMTB IN THE ZN1-FORM (ONE ZN(II) PER DIMER)
1SMTA:; B:SMTB REPRESSOR FROM SYNECHOCOCCUS PCC7942
(-)
Family: automated matches (118)
(-)
Protein domain: automated matches (118)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (1)
2P6UA:404-488APO STRUCTURE OF THE HEL308 SUPERFAMILY 2 HELICASE
(-)
Bacillus cereus [TaxId: 222523] (2)
3BJAA:CRYSTAL STRUCTURE OF PUTATIVE MARR-LIKE TRANSCRIPTION REGULATOR (NP_978771.1) FROM BACILLUS CEREUS ATCC 10987 AT 2.38 A RESOLUTION
4ESFA:CRYSTAL STRUCTURE OF PADR-LIKE TRANSCRIPTIONAL REGULATOR (BCE3449) FROM BACILLUS CEREUS STRAIN ATCC 10987
(-)
Bacillus cereus [TaxId: 226900] (2)
1YLFB:; C:X-RAY CRYSTAL STRUCTURE OF BC1842 PROTEIN FROM BACILLUS CEREUS, A MEMBER OF THE RRF2 FAMILY OF PUTATIVE TRANSCRIPTION REGULATORS.
4ESBA:CRYSTAL STRUCTURE OF PADR-LIKE TRANSCRIPTIONAL REGULATOR (BC4206) FROM BACILLUS CEREUS STRAIN ATCC 14579
(-)
Bacillus subtilis [TaxId: 1423] (6)
2FE3A:; B:THE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS PERR-ZN REVEALS A NOVEL ZN(CYS)4 STRUCTURAL REDOX SWITCH
2HZTB:; C:; D:CRYSTAL STRUCTURE OF A PUTATIVE HTH-TYPE TRANSCRIPTIONAL REGULATOR YTCD
2RGVA:; B:THE CRYSTAL STRUCTURE OF PERR-OX HIGHLIGHTS 2-OXO-HISTIDINE FORMATION
3F8NA:; B:CRYSTAL STRUCTURE OF PERR-ZN-MN
4A5MA:; B:; C:; D:; E:; F:; G:; H:REDOX REGULATOR HYPR IN ITS OXIDIZED FORM
4A5NA:; B:; C:; D:REDOXREGULATOR HYPR IN ITS REDUCED FORM
(-)
Campylobacter jejuni [TaxId: 32022] (1)
4ETSA:; B:CRYSTAL STRUCTURE OF CAMPYLOBACTER JEJUNI FERRIC UPTAKE REGULATOR
(-)
Carboxydothermus hydrogenoformans [TaxId: 129958] (1)
2FMYA:139-219; B:1139-1219; C:2139-2219; D:3139-3219CO-DEPENDENT TRANSCRIPTION FACTOR COOA FROM CARBOXYDOTHERMUS HYDROGENOFORMANS (IMIDAZOLE-BOUND FORM)
(-)
Clarkia breweri [TaxId: 36903] (2)
3REOA:17-122; B:16-122; C:8-122; D:9-122MONOLIGNOL O-METHYLTRANSFERASE (MOMT)
3TKYA:16-122; B:9-122; C:16-122; D:9-122MONOLIGNOL O-METHYLTRANSFERASE (MOMT)
(-)
Clostridium acetobutylicum [TaxId: 1488] (1)
3JW4A:; B:; C:THE STRUCTURE OF A PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM CLOSTRIDIUM ACETOBUTYLICUM
(-)
Corynebacterium diphtheriae [TaxId: 1717] (1)
3GLXA:6-64CRYSTAL STRUCTURE ANALYSIS OF THE DTXR(E175K) COMPLEXED WITH NI(II)
(-)
Corynebacterium glutamicum [TaxId: 1718] (1)
3R6SA:148-227; B:148-227; C:148-226; D:148-226; E:148-227; F:148-227CRYSTAL STRUCTURE OF GLXR TRANSCRIPTION FACTOR FROM CORYNEBACTERIUM GLUTAMICUM WITH CAMP
(-)
Eggerthella lenta [TaxId: 479437] (1)
4EJOA:; B:CRYSTAL STRUCTURE OF PADR FAMILY TRANSCRIPTIONAL REGULATOR FROM EGGERTHELLA LENTA DSM 2243
(-)
Enterococcus faecalis [TaxId: 1351] (1)
3HHHA:; B:CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR, A MEMBER OF PADR FAMILY, FROM ENTEROCOCCUS FAECALIS V583
(-)
Escherichia coli K-12 [TaxId: 83333] (13)
3FWEA:138-207; B:138-208CRYSTAL STRUCTURE OF THE APO D138L CAP MUTANT
3JSOA:2-69; B:2-69CLASSIC PROTEIN WITH A NEW TWIST: CRYSTAL STRUCTURE OF A LEXA REPRESSOR DNA COMPLEX
3JSPA:2-70; B:2-71CLASSIC PROTEIN WITH A NEW TWIST: CRYSTAL STRUCTURE OF A LEXA REPRESSOR DNA COMPLEX
3KCCA:138-206; B:138-206CRYSTAL STRUCTURE OF D138L MUTANT OF CATABOLITE GENE ACTIVATOR PROTEIN
3RDIA:138-207; B:138-207DOMAIN-DOMAIN FLEXIBILITY LEADS TO ALLOSTERY WITHIN THE CAMP RECEPTOR PROTEIN (CRP)
3ROUA:138-207; B:138-207DOMAIN-DOMAIN FLEXIBILITY LEADS TO ALLOSTERY WITHIN THE CAMP RECEPTOR PROTEIN (CRP)
3RPQA:138-207; B:138-208DOMAIN-DOMAIN FLEXIBILITY LEADS TO ALLOSTERY WITHIN THE CAMP RECEPTOR PROTEIN (CRP)
4HZFA:139-208; B:139-209STRUCTURE OF THE WILD TYPE CATABOLITE GENE ACTIVATOR PROTEIN
4I01A:139-207; B:139-208STRUCTURE OF THE MUTANT CATABOLITE GEN ACTIVATOR PROTEIN V140L
4I02A:139-209; E:139-209; F:139-209; B:139-209; C:139-209; D:139-209STRUCTURE OF THE MUTANT CATABOLITE GENE ACTIVATOR PROTEIN V140A
4I09A:139-209; B:139-209STRUCTURE OF THE MUTANT CATABOLITE GENE ACTIVATOR PROTEIN V132L
4I0AA:139-207; B:139-208STRUCTURE OF THE MUTANT CATABOLITE GENE ACTIVATOR PROTEIN V132A
4I0BA:139-207; B:139-208STRUCTURE OF THE MUTANT CATABOLITE GENE ACTIVATOR PROTEIN H160L
(-)
Escherichia coli [TaxId: 469008] (1)
2WC2A:138-209; B:138-209NMR STRUCTURE OF CATABOLITE ACTIVATOR PROTEIN IN THE UNLIGANDED STATE
(-)
Helicobacter pylori [TaxId: 85962] (1)
2XIGA:; B:; C:; D:THE STRUCTURE OF THE HELICOBACTER PYLORI FERRIC UPTAKE REGULATOR FUR REVEALS THREE FUNCTIONAL METAL BINDING SITES
(-)
Human (Homo sapiens) [TaxId: 9606] (10)
2A07G:; K:; H:; I:; J:CRYSTAL STRUCTURE OF FOXP2 BOUND SPECIFICALLY TO DNA.
2AS5F:; G:STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT AND FOXP2 BOUND SPECIFICALLY TO DNA.
2DLLA:SOLUTION STRUCTURE OF THE IRF DOMAIN OF HUMAN INTERFERON REGULATOR FACTORS 4
2LNBA:SOLUTION NMR STRUCTURE OF N-TERMINAL DOMAIN (6-74) OF HUMAN ZBP1 PROTEIN, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR8174A.
2ZMEA:34-175; A:176-250INTEGRATED STRUCTURAL AND FUNCTIONAL MODEL OF THE HUMAN ESCRT-II COMPLEX
3CUQA:34-175; A:176-252INTEGRATED STRUCTURAL AND FUNCTIONAL MODEL OF THE HUMAN ESCRT-II COMPLEX
4AVPA:; B:; C:; D:CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN ETV1.
4CO8A:STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4
4IRGA:UNINHIBITED DNA-BINDING DOMAIN OF THE ETS TRANSCRIPTION FACTOR ERG
4IRHA:AUTO-INHIBITED ERG ETS DOMAIN
(-)
Lactobacillus plantarum [TaxId: 1590] (1)
3K69A:CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR (LP_0360) FROM LACTOBACILLUS PLANTARUM AT 1.95 A RESOLUTION
(-)
Lactococcus lactis [TaxId: 416870] (3)
3F8BA:; B:CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REGULATOR LMRR IN DRUG FREE STATE
3F8CA:CRYSTAL STRUCTURE OF MULTIDRUG BINDING TRANSCRIPTIONAL REGULATOR LMRR COMPLEXED WITH HOECHST 33342
3F8FA:; B:CRYSTAL STRUCTURE OF MULTIDRUG BINDING TRANSCRIPTIONAL REGULATOR LMRR COMPLEXED WITH DAUNOMYCIN
(-)
Linum nodiflorum [TaxId: 407264] (3)
4E70A:1-112; B:993-1112CRYSTAL STRUCTURE ANALYSIS OF CONIFERYL ALCOHOL 9-O-METHYLTRANSFERASE FROM LINUM NODIFLORUM IN COMPLEX WITH CONIFERYL ALCOHOL
4EMSA:1-112; B:-7-112CRYSTAL STRUCTURE ANALYSIS OF CONIFERYL ALCOHOL 9-O-METHYLTRANSFERASE FROM LINUM NODIFLORUM
4EVIA:1-112; B:-7-112CRYSTAL STRUCTURE ANALYSIS OF CONIFERYL ALCOHOL 9-O-METHYLTRANSFERASE FROM LINUM NODIFLORUM IN COMPLEX WITH CONIFERYL ALCOHOL 9-METHYL ETHER AND S -ADENOSYL-L-HOMOCYSTEINE
(-)
Lolium perenne [TaxId: 4522] (3)
3P9CA:9-116CRYSTAL STRUCTURE OF PERENNIAL RYEGRASS LPOMT1 BOUND TO SAH
3P9IA:4-116; B:5-116; C:4-116; D:10-116CRYSTAL STRUCTURE OF PERENNIAL RYEGRASS LPOMT1 COMPLEXED WITH S-ADENOSYL-L-HOMOCYSTEINE AND SINAPALDEHYDE
3P9KA:4-116; B:5-116; C:4-116; D:10-116CRYSTAL STRUCTURE OF PERENNIAL RYEGRASS LPOMT1 COMPLEXED WITH S-ADENOSYL-L-HOMOCYSTEINE AND CONIFERALDEHYDE
(-)
Medicago truncatula [TaxId: 3880] (5)
1ZG3A:7-116CRYSTAL STRUCTURE OF THE ISOFLAVANONE 4'-O-METHYLTRANSFERASE COMPLEXED WITH SAH AND 2,7,4'-TRIHYDROXYISOFLAVANONE
1ZGAA:8-116CRYSTAL STRUCTURE OF ISOFLAVANONE 4'-O-METHYLTRANSFERASE COMPLEXED WITH (+)-6A-HYDROXYMAACKIAIN
1ZGJA:11-116CRYSTAL STRUCTURE OF ISOFLAVANONE 4'-O-METHYLTRANSFERASE COMPLEXED WITH (+)-PISATIN
1ZHFA:8-116CRYSTAL STRUCTURE OF SELENOMETHIONINE SUBSTITUTED ISOFLAVANONE 4'-O-METHYLTRANSFERASE
2QYOA:5-113; B:6-113CRYSTAL STRUCTURE OF ISOFLAVONE O-METHYLTRANSFERASE HOMOLOG IN COMPLEX WITH BIOCHANIN A AND SAH
(-)
Methanobacterium thermoautotrophicum (2)
3BPVA:CRYSTAL STRUCTURE OF MARR
3BPXA:; B:CRYSTAL STRUCTURE OF MARR
(-)
Mouse (Mus musculus) [TaxId: 10090] (3)
2LF7A:INTRAMOLECULAR REGULATION OF THE ETS DOMAIN WITHIN ETV6 SEQUENCE R335 TO Q436
2MD5A:STRUCTURE OF UNINHIBITED ETV6 ETS DOMAIN
3QU3A:; B:; C:CRYSTAL STRUCTURE OF IRF-7 DBD APO FORM
(-)
Mycobacterium bovis [TaxId: 233413] (1)
3GW2A:CRYSTAL STRUCTURE OF POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (FRAGMENT 1-100) FROM MYCOBACTERIUM BOVIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MBR242E.
(-)
Mycobacterium tuberculosis [TaxId: 1773] (6)
2LKPA:; B:SOLUTION STRUCTURE OF APO-NMTR
2O03A:CRYSTAL STRUCTURE OF FURB FROM M. TUBERCULOSIS- A ZINC UPTAKE REGULATOR
3D0SA:145-224; B:145-215CAMP RECEPTOR PROTEIN FROM M.TUBERCULOSIS, CAMP-FREE FORM
3I54B:145-223; C:145-223; D:145-223CRYSTAL STRUCTURE OF MTBCRP IN COMPLEX WITH CAMP
3I59A:145-223; B:145-215CRYSTAL STRUCTURE OF MTBCRP IN COMPLEX WITH N6-CAMP
4A2UA:145-224; D:145-224; E:145-224; F:145-224; G:145-224; H:145-224; B:145-224; C:145-224CRP(CAP) FROM MYCO. TUBERCULOSIS, WITH CAMP
(-)
Mycobacterium tuberculosis [TaxId: 83332] (3)
2JSCA:; B:NMR STRUCTURE OF THE CADMIUM METAL-SENSOR CMTR FROM MYCOBACTERIUM TUBERCULOSIS
3H3UA:145-224; B:145-214CRYSTAL STRUCTURE OF CRP (CAMP RECEPTOR PROTEIN) FROM MYCOBACTERIUM TUBERCULOSIS
3MZHA:145-224; B:145-224CRYSTAL STRUCTURE OF CAMP RECEPTOR PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH CAMP AND ITS DNA BINDING ELEMENT
(-)
Neisseria meningitidis [TaxId: 122586] (3)
2P5VA:3-65; B:3-65; C:5-65; D:3-65; E:3-65; F:5-65; G:1-65; H:5-65CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR NMB0573 FROM NEISSERIA MENINGITIDIS
2P6SA:3-65; C:5-65; D:3-65; E:3-65; F:5-65; G:1-65; H:5-65; B:3-65CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR NMB0573/L-MET COMPLEX FROM NEISSERIA MENINGITIDIS
2P6TA:3-65; B:3-65; C:5-65; D:3-65; E:5-65; F:4-65; G:1-65; H:5-65CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR NMB0573 AND L-LEUCINE COMPLEX FROM NEISSERIA MENINGITIDIS
(-)
Nematode (Brugia malayi) [TaxId: 6279] (1)
2MBFA:SOLUTION STRUCTURE OF THE FORKHEAD DOMAIN OF BRUGIA MALAYI DAF-16A
(-)
Pseudomonas aeruginosa [TaxId: 208964] (1)
4GCVA:; B:; K:; L:; C:; D:; E:; F:; G:; H:; I:; J:STRUCTURE OF A PUTATIVE TRANSCRIPTION FACTOR (PA1374)FROM PSEUDOMONAS AERUGINOSA
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
2CYYA:1-64CRYSTAL STRUCTURE OF PH1519 FROM PYROCOCCUS HORIKOSII OT3
(-)
Silicibacter pomeroyi [TaxId: 246200] (2)
3CJNA:CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR, MARR FAMILY, FROM SILICIBACTER POMEROYI
3E6MB:; C:; D:; F:; H:THE CRYSTAL STRUCTURE OF A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM SILICIBACTER POMEROYI DSS.
(-)
Silicibacter pomeroyi [TaxId: 89184] (1)
3E6MA:; E:; G:THE CRYSTAL STRUCTURE OF A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM SILICIBACTER POMEROYI DSS.
(-)
Slime mold (Dictyostelium discoideum) [TaxId: 44689] (1)
2M5WA:NMR SOLUTION STRUCTURE OF THE LA MOTIF (N-TERMINAL DOMAIN, NTD) OF DICTYOSTELIUM DISCOIDEUM LA PROTEIN
(-)
Staphylococcus aureus [TaxId: 1280] (5)
4HQMA:; B:THE CRYSTAL STRUCTURE OF QSRR-MENADIONE COMPLEX
4L9NA:; B:CRYSTAL STRUCTURE OF MEPR A103V MUTANT FROM MULTIDRUG RESISTANT S. AUREUS CLINICAL ISOLATE
4L9TA:; B:CRYSTAL STRUCTURE OF MEPR F27L MUTANT FROM MULTIDRUG RESISTANT S. AUREUS CLINICAL ISOLATE
4L9VA:CRYSTAL STRUCTURE OF SE-MET DERIVATIVE MEPR F27L MUTANT FROM MULTIDRUG RESISTANT S. AUREUS CLINICAL ISOLATE
4LD5A:; G:; H:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF MEPR Q18P MUTANT FROM MULTIDRUG RESISTANT S. AUREUS CLINICAL ISOLATE
(-)
Staphylococcus aureus [TaxId: 158878] (1)
3ECOA:; B:CRYSTAL STRUCTURE OF MEPR, A TRANSCRIPTION REGULATOR OF THE STAPHYLOCOCCUS AUREUS MULTIDRUG EFFLUX PUMP MEPA
(-)
Staphylococcus aureus [TaxId: 426430] (4)
3HRMA:; B:CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS PROTEIN SARZ IN SULFENIC ACID FORM
3HSEA:; B:CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS PROTEIN SARZ IN REDUCED FORM
3HSRA:; B:; C:; D:CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS PROTEIN SARZ IN MIXED DISULFIDE FORM
4GXOA:; B:CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS PROTEIN SARZ MUTANT C13E
(-)
Staphylococcus epidermidis [TaxId: 176279] (1)
4HBLA:; B:; C:; D:CRYSTAL STRUCTURE OF ABFR OF STAPHYLOCOCCUS EPIDERMIDIS
(-)
Streptococcus mutans [TaxId: 210007] (1)
3L7WA:THE CRYSTAL STRUCTURE OF SMU.1704 FROM STREPTOCOCCUS MUTANS UA159
(-)
Streptococcus pyogenes [TaxId: 198466] (2)
4I7HA:; B:STRUCTURAL BASIS FOR PEROXIDE SENSING AND GENE REGULATION BY PERR FROM STREPTOCOCCUS PYOGENES
4LMYA:; B:STRUCTURE OF GAS PERR-ZN-ZN
(-)
Streptomyces coelicolor [TaxId: 1902] (2)
3EYYA:; B:STRUCTURAL BASIS FOR THE SPECIALIZATION OF NUR, A NICKEL-SPECIFIC FUR HOMOLOGUE, IN METAL SENSING AND DNA RECOGNITION
3MWMA:; B:GRADED EXPRESSION OF ZINC-RESPONSIVE GENES THROUGH TWO REGULATORY ZINC-BINDING SITES IN ZUR
(-)
Sulfolobus solfataricus [TaxId: 273057] (1)
4HW0A:; B:; C:CRYSTAL STRUCTURE OF SSO10A-2, A DNA-BINDING PROTEIN FROM SULFOLOBUS SOLFATARICUS
(-)
Sulfolobus tokodaii [TaxId: 111955] (3)
2E7WA:1-60CRYSTAL STRUCTURE OF THE LRP/ASNC LIKE TRANSCRIPTIONAL REGULATORS FROM SULFOLOBUS TOKODAII 7
2E7XA:1-60STRUCTURE OF THE LRP/ASNC LIKE TRANSCRIPTIONAL REGULATOR FROM SULFOLOBUS TOKODAII 7 COMPLEXED WITH ITS COGNATE LIGAND
2EFPA:1-60CRYSTAL STRUCTURE OF TYR77 TO ALA OF ST1022-GLUTAMINE COMPLEX FROM SULOLOBUS TOKODAII 7
(-)
Sulfolobus tokodaii [TaxId: 273063] (7)
2EFNA:1-60CRYSTAL STRUCTURE OF SER 32 TO ALA OF ST1022 FROM SULFOLOBUS TOKODAII 7
2EFOA:1-60CRYSTAL STRUCTURE OF TYR77 TO ALA OF ST1022 FROM SULFOLOBUS TOKODAII 7
2EFQA:1-60CRYSTAL STRUCTURE OF THR134 TO ALA OF ST1022-GLUTAMINE COMPLEX FROM SULFOLOBUS TOKODAII 7
2PMHA:1-60CRYSTAL STRUCTURE OF THR132ALA OF ST1022 FROM SULFOLOBUS TOKODAII
2PN6A:1-60CRYSTAL STRUCTURE OF S32A OF ST1022-GLN COMPLEX FROM SULFOLOBUS TOKODAII
2YX4A:1-60CRYSTAL STRUCTURE OF T134A OF ST1022 FROM SULFOLOBUS TOKODAII
2YX7A:1-60CRYSTALS STRUCTURE OF T132A MUTANT OF ST1022 FROM SULFOLOBUS TOKODAII 7
(-)
Thermoplasma acidophilum [TaxId: 2303] (1)
3ELKA:; B:CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTIONAL REGULATOR TA0346 FROM THERMOPLASMA ACIDOPHILUM
(-)
Thermoplasma volcanium [TaxId: 50339] (1)
3DF8A:THE CRYSTAL STRUCTURE OF A POSSIBLE HXLR FAMILY TRANSCRIPTIONAL FACTOR FROM THERMOPLASMA VOLCANIUM GSS1
(-)
Thermotoga maritima [TaxId: 2336] (1)
3K2ZA:3-71; B:3-71CRYSTAL STRUCTURE OF A LEXA PROTEIN FROM THERMOTOGA MARITIMA
(-)
Vibrio cholerae [TaxId: 666] (1)
2W57A:; B:CRYSTAL STRUCTURE OF THE VIBRIO CHOLERAE FERRIC UPTAKE REGULATOR (FUR) REVEALS STRUCTURAL REARRANGEMENT OF THE DNA-BINDING DOMAINS
(-)
Xanthomonas campestris [TaxId: 339] (1)
2FA5A:; B:THE CRYSTAL STRUCTURE OF AN UNLIGANDED MULTIPLE ANTIBIOTIC-RESISTANCE REPRESSOR (MARR) FROM XANTHOMONAS CAMPESTRIS
(-)
Xanthomonas campestris [TaxId: 340] (1)
3IWZA:159-228; B:159-228; C:159-229; D:159-229THE C-DI-GMP RESPONSIVE GLOBAL REGULATOR CLP LINKS CELL-CELL SIGNALING TO VIRULENCE GENE EXPRESSION IN XANTHOMONAS CAMPESTRIS
(-)
Family: Biotin repressor-like (5)
(-)
Protein domain: Biotin repressor, N-terminal domain (4)
(-)
Escherichia coli [TaxId: 562] (4)
1BIAA:1-63THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS
1BIBA:2-63THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS
1HXDA:4-63; B:4-63CRYSTAL STRUCTURE OF E. COLI BIOTIN REPRESSOR WITH BOUND BIOTIN
2EWNA:3-63; B:2-63ECOLI BIOTIN REPRESSOR WITH CO-REPRESSOR ANALOG
(-)
Protein domain: Putative transcriptional regulator TM1602, N-terminal domain (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
1J5YA:3-67CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR (TM1602) FROM THERMOTOGA MARITIMA AT 2.3 A RESOLUTION
(-)
Family: C-terminal domain of RPA32 (2)
(-)
Protein domain: C-terminal domain of RPA32 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1DPUA:SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN RPA32 COMPLEXED WITH UNG2(73-88)
1Z1DA:202-270STRUCTURAL MODEL FOR THE INTERACTION BETWEEN RPA32 C-TERMINAL DOMAIN AND SV40 T ANTIGEN ORIGIN BINDING DOMAIN.
(-)
Family: C-terminal domain of the rap74 subunit of TFIIF (4)
(-)
Protein domain: C-terminal domain of the rap74 subunit of TFIIF (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (4)
1I27A:CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF THE RAP74 SUBUNIT OF HUMAN TRANSCRIPTION FACTOR IIF (TFIIF)
1J2XA:CRYSTAL STRUCTURE OF RAP74 C-TERMINAL DOMAIN COMPLEXED WITH FCP1 C-TERMINAL PEPTIDE
1NHAA:SOLUTION STRUCTURE OF THE CARBOXYL-TERMINAL DOMAIN OF RAP74 AND NMR CHARACTERIZATION OF THE FCP-BINDING SITES OF RAP74 AND CTD OF RAP74, THE SUBUNIT OF HUMAN TFIIF
1ONVA:NMR STRUCTURE OF A COMPLEX CONTAINING THE TFIIF SUBUNIT RAP74 AND THE RNAP II CTD PHOSPHATASE FCP1
(-)
Family: C-terminal fragment of elongation factor SelB (5)
(-)
Protein domain: automated matches (1)
(-)
Moorella thermoacetica [TaxId: 1525] (1)
2V9VA:377-437; A:438-511CRYSTAL STRUCTURE OF MOORELLA THERMOACETICA SELB(377-511)
(-)
Protein domain: C-terminal fragment of elongation factor SelB (4)
(-)
Moorella thermoacetica [TaxId: 1525] (4)
1LVAA:377-437; A:438-510; A:511-574; A:575-634CRYSTAL STRUCTURE OF A C-TERMINAL FRAGMENT OF MOORELLA THERMOACETICA ELONGATION FACTOR SELB
1WSUA:512-574; A:575-634; B:512-574; B:575-632; C:517-574; C:575-632; D:512-574; D:575-634C-TERMINAL DOMAIN OF ELONGATION FACTOR SELB COMPLEXED WITH SECIS RNA
2PLYA:392-437; A:438-510; A:511-574; A:575-632STRUCTURE OF THE MRNA BINDING FRAGMENT OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA.
2UWMA:441-510; A:511-574; A:575-633; B:441-510; B:511-574; B:575-633C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA
(-)
Family: CAP C-terminal domain-like (39)
(-)
Protein domain: automated matches (2)
(-)
Listeria monocytogenes [TaxId: 169963] (2)
2BEOA:138-237; B:138-237PRFA, TRANSCRIPTIONAL REGULATOR IN LISTERIA MONOCYTOGENES
2BGCA:138-237; B:138-237; D:138-237; E:138-237; F:138-237; G:138-237; H:138-235; I:138-237PRFA-G145S, A CONSTITUTIVE ACTIVE MUTANT OF THE TRANSCRIPTIONAL REGULATOR IN L.MONOCYTOGENES
(-)
Protein domain: Catabolite gene activator protein (CAP), C-terminal domain (24)
(-)
Escherichia coli [TaxId: 562] (24)
1CGPA:138-205; B:138-205CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
1G6NA:138-206; B:438-5072.1 ANGSTROM STRUCTURE OF CAP-CAMP
1HW5A:138-208; B:138-205THE CAP/CRP VARIANT T127L/S128A
1I5ZA:138-206; B:138-207STRUCTURE OF CRP-CAMP AT 1.9 A
1I6XA:138-206; B:138-207STRUCTURE OF A STAR MUTANT CRP-CAMP AT 2.2 A
1J59A:138-207; B:138-205CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
1LB2A:138-209STRUCTURE OF THE E. COLI ALPHA C-TERMINAL DOMAIN OF RNA POLYMERASE IN COMPLEX WITH CAP AND DNA
1O3QA:138-207PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
1O3RA:138-207PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
1O3SA:138-207PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
1O3TA:138-207; B:138-205PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
1RUNA:138-209; B:138-205CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
1RUOA:138-206; B:138-209CATABOLITE GENE ACTIVATOR PROTEIN (CAP) MUTANT/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
1ZRCA:138-207; B:138-2074 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-ICAP38 DNA
1ZRDA:138-207; B:138-2074 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-[6A;17T]ICAP38 DNA
1ZREA:138-207; B:138-2074 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-[6G;17C]ICAP38 DNA
1ZRFA:138-209; B:138-2074 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-[6C;17G]ICAP38 DNA
2CGPA:138-207CATABOLITE GENE ACTIVATOR PROTEIN/DNA COMPLEX, ADENOSINE-3', 5'-CYCLIC-MONOPHOSPHATE
2GZWA:138-206; B:138-203; C:138-206; D:138-208CRYSTAL STRUCTURE OF THE E.COLI CRP-CAMP COMPLEX
3N4MA:138-209E. COLI RNA POLYMERASE ALPHA SUBUNIT C-TERMINAL DOMAIN IN COMPLEX WITH CAP AND DNA
3QOPA:138-207; B:138-207DOMAIN-DOMAIN FLEXIBILITY LEADS TO ALLOSTERY WITHIN THE CAMP RECEPTOR PROTEIN (CRP)
3RYPA:138-207; B:138-208DOMAIN-DOMAIN FLEXIBILITY LEADS TO ALLOSTERY WITHIN THE CAMP RECEPTOR PROTEIN (CRP)
3RYRA:138-207; B:138-208DOMAIN-DOMAIN FLEXIBILITY LEADS TO ALLOSTERY WITHIN THE CAMP RECEPTOR PROTEIN (CRP)
4FT8A:138-207; B:138-206E. COLI CATABOLITE ACTIVATOR PROTEIN WITH COBALT AND SULFATE LIGANDS
(-)
Protein domain: Chlorophenol reduction protein CprK (7)
(-)
Desulfitobacterium dehalogenans [TaxId: 36854] (1)
2H6CA:148-226; B:148-226CRYSTAL STRUCTURE OF REDUCED CPRK IN ABSENCE OF ANY LIGAND
(-)
Desulfitobacterium hafniense [TaxId: 49338] (6)
2H6BA:148-229; B:148-243CRYSTAL STRUCTURE OF OXIDIZED CPRK IN COMPLEX WITH O-CHLOROPHENOLACETIC ACID
3E5UA:148-227; B:148-226; C:148-227; D:148-228OCPA COMPLEXED CPRK (C200S)
3E5XA:148-222; B:148-227; C:148-222; D:148-228OCPA COMPLEXED CPRK
3E6BA:148-227; B:148-226OCPA COMPLEXED CPRK (C200S)
3E6CC:148-233CPRK OCPA DNA COMPLEX
3E6DA:149-226; B:149-228CRYSTAL STRUCTURE OF CPRK C200S
(-)
Protein domain: CO-sensing protein CooA, C-terminal domain (1)
(-)
Rhodospirillum rubrum [TaxId: 1085] (1)
1FT9A:134-213; B:134-213STRUCTURE OF THE REDUCED (FEII) CO-SENSING PROTEIN FROM R. RUBRUM
(-)
Protein domain: Cyclic AMP receptor-like protein Vfr (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2OZ6A:143-213CRYSTAL STRUCTURE OF VIRULENCE FACTOR REGULATOR FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH CAMP
(-)
Protein domain: Listeriolysin regulatory protein PrfA, C-terminal domain (1)
(-)
Listeria monocytogenes [TaxId: 1639] (1)
1OMIA:1138-1237; B:2138-2237CRYSTAL STRUCTURE OF PRFA,THE TRANSCRIPTIONAL REGULATOR IN LISTERIA MONOCYTOGENES
(-)
Protein domain: Probable transcription regulator BT4300, C-terminal domain (1)
(-)
Bacteroides thetaiotaomicron [TaxId: 818] (1)
1ZYBA:148-220CRYSTAL STRUCTURE OF TRANSCRIPTION REGULATOR FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.15 A RESOLUTION
(-)
Protein domain: Transcriptional regulator PG0396, C-terminal domain (1)
(-)
Porphyromonas gingivalis [TaxId: 837] (1)
2GAUA:152-232CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR, CRP/FNR FAMILY FROM PORPHYROMONAS GINGIVALIS (APC80792), STRUCTURAL GENOMICS, MCSG
(-)
Protein domain: Transcriptional regulator TTHA1359, C-terminal domain (1)
(-)
Thermus thermophilus [TaxId: 274] (1)
2ZCWA:117-198CRYSTAL STRUCTURE OF TTHA1359, A TRANSCRIPTIONAL REGULATOR, CRP/FNR FAMILY FROM THERMUS THERMOPHILUS HB8
(-)
Family: CED-4 C-terminal domain-like (1)
(-)
Protein domain: Cell death protein 4, CED-4 (1)
(-)
Nematode (Caenorhabditis elegans) [TaxId: 6239] (1)
2A5YB:386-543; C:386-543STRUCTURE OF A CED-4/CED-9 COMPLEX
(-)
Family: Cell cycle transcription factor e2f-dp (2)
(-)
Protein domain: Cell cycle transcription factor DP-2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1CF7B:STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP
(-)
Protein domain: Cell cycle transcription factor E2F-4 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1CF7A:STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP
(-)
Family: CodY HTH domain (1)
(-)
Protein domain: GTP-sensing transcriptional pleiotropic repressor CodY, C-terminal domain (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
2B0LA:167-257; B:; C:C-TERMINAL DNA BINDING DOMAIN OF TRANSCRIPTIONAL PLEIOTROPIC REPRESSOR CODY.
(-)
Family: DEP domain (6)
(-)
Protein domain: Pleckstrin (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1W4MA:STRUCTURE OF THE HUMAN PLECKSTRIN DEP DOMAIN BY MULTIDIMENSIONAL NMR
2CSOA:8-122SOLUTION STRUCTURE OF THE DEP DOMAIN OF HUMAN PLECKSTRIN
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1UHWA:SOLUTION STRUCTURE OF THE DEP DOMAIN OF MOUSE PLECKSTRIN
(-)
Protein domain: Pleckstrin 2 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1V3FA:SOLUTION STRUCTURE OF THE DEP DOMAIN OF MOUSE PLECKSTRIN2
(-)
Protein domain: Regulatory domain of epac2, domain 2 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1O7FA:180-321CRYSTAL STRUCTURE OF THE REGULATORY DOMAIN OF EPAC2
(-)
Protein domain: Segment polarity protein Dishevelled-1 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1FSHA:STRUCTURAL BASIS OF THE RECOGNITION OF THE DISHEVELLED DEP DOMAIN IN THE WNT SIGNALING PATHWAY
(-)
Family: Dissimilatory sulfite reductase DsvD (2)
(-)
Protein domain: automated matches (1)
(-)
Desulfovibrio vulgaris [TaxId: 881] (1)
1WQ2A:; B:NEUTRON CRYSTAL STRUCTURE OF DISSIMILATORY SULFITE REDUCTASE D (DSRD)
(-)
Protein domain: Dissimilatory sulfite reductase DsvD (1)
(-)
Desulfovibrio vulgaris [TaxId: 881] (1)
1UCRA:; B:THREE-DIMENSIONAL CRYSTAL STRUCTURE OF DISSIMILATORY SULFITE REDUCTASE D (DSRD)
(-)
Family: DNA replication factor Cdt1 (1)
(-)
Protein domain: DNA replication factor Cdt1 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
2ZXXC:; F:CRYSTAL STRUCTURE OF CDT1/GEMININ COMPLEX
(-)
Family: DNA-binding domain from rap30 (2)
(-)
Protein domain: DNA-binding domain from rap30 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1BBYA:DNA-BINDING DOMAIN FROM HUMAN RAP30, NMR, MINIMIZED AVERAGE
2BBYA:DNA-BINDING DOMAIN FROM HUMAN RAP30, NMR, 30 STRUCTURES
(-)
Family: DNA-binding protein Mj223 (1)
(-)
Protein domain: DNA-binding protein Mj223 (1)
(-)
Methanococcus jannaschii [TaxId: 2190] (1)
1KU9A:; B:X-RAY STRUCTURE OF A METHANOCOCCUS JANNASCHII DNA-BINDING PROTEIN: IMPLICATIONS FOR ANTIBIOTIC RESISTANCE IN STAPHYLOCOCCUS AUREUS
(-)
Family: ELL N2 domain-like (2)
(-)
Protein domain: automated matches (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2E5NA:SOLUTION STRUCTURE OF THE ELL_N2 DOMAIN OF TARGET OF RNA POLYMERASE II ELONGATION FACTOR ELL2
(-)
Protein domain: RNA polymerase II elongation factor ELL (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2DOAA:8-98SOLUTION STRUCTURE OF THE HELICAL DOMAIN IN HUMAN ELEVEN-NINETEEN LYSINE-RICH LEUKEMIA PROTEIN ELL
(-)
Family: ets domain (23)
(-)
Protein domain: automated matches (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
2NNYA:; B:CRYSTAL STRUCTURE OF THE ETS1 DIMER DNA COMPLEX.
2YPRA:; B:CRYSTAL STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN PROTEIN FEV
3RI4A:; D:ETS1 COOPERATIVE BINDING TO WIDELY SEPARATED SITES ON PROMOTER DNA
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
3JTGA:CRYSTAL STRUCTURE OF MOUSE ELF3 C-TERMINAL DNA-BINDING DOMAIN IN COMPLEX WITH TYPE II TGF-BETA RECEPTOR PROMOTER DNA
(-)
Protein domain: E74-like factor 5 ese-2b (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WWXA:8-101SOLUTION STRUCTURE OF THE ETS-DOMAIN OF THE ETS DOMAIN TRANSCRIPTION FACTOR
(-)
Protein domain: Elk-1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1DUXC:; F:ELK-1/DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA-BINDING SURFACE AFFECT DNA-RECOGNITION
(-)
Protein domain: ETS-1 transcription factor, residues 331-440 (9)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1GVJA:; B:ETS-1 DNA BINDING AND AUTOINHIBITORY DOMAINS
2STTA:SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, 25 STRUCTURES
2STWA:SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, RESTRAINED REGULARIZED MEAN STRUCTURE
(-)
Mouse (Mus musculus) [TaxId: 10090] (6)
1K78B:; F:PAX5(1-149)+ETS-1(331-440)+DNA
1K79A:; D:ETS-1(331-440)+GGAA DUPLEX
1K7AA:; D:ETS-1(331-440)+GGAG DUPLEX
1MD0A:; B:CRYSTAL STRUCTURE OF AN INHIBITED FRAGMENT OF ETS-1
1MDMB:INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
1R36A:NMR-BASED STRUCTURE OF AUTOINHIBITED MURINE ETS-1 DELTAN301
(-)
Protein domain: Fli-1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1FLIA:DNA-BINDING DOMAIN OF FLI-1
(-)
Protein domain: GA binding protein (GABP) alpha (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1AWCA:MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA
(-)
Protein domain: Sam pointed domain containing ets transcription SPDEF (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1YO5C:247-334ANALYSIS OF THE 2.0A CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX OF HUMAN PDEF ETS DOMAIN BOUND TO THE PROSTATE SPECIFIC ANTIGEN REGULATORY SITE
(-)
Protein domain: Serum response factor accessory protein 1a, SAP-1 (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (4)
1BC7C:SERUM RESPONSE FACTOR ACCESSORY PROTEIN 1A (SAP-1)/DNA COMPLEX
1BC8C:STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETS
1HBXG:; H:TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
1K6OA:CRYSTAL STRUCTURE OF A TERNARY SAP-1/SRF/C-FOS SRE DNA COMPLEX
(-)
Protein domain: Transcription factor PU.1, residues 171-259 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1PUEE:; F:PU.1 ETS DOMAIN-DNA COMPLEX
(-)
Family: Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain (1)
(-)
Protein domain: Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1RZ4A:132-216CRYSTAL STRUCTURE OF HUMAN EIF3K
(-)
Family: F112-like (1)
(-)
Protein domain: F-112 (1)
(-)
Sulfolobus virus-like particle SSV1 [TaxId: 244589] (1)
2VQCA:4-73STRUCTURE OF A DNA BINDING WINGED-HELIX PROTEIN, F-112, FROM SULFOLOBUS SPINDLE-SHAPED VIRUS 1.
(-)
Family: F93-like (4)
(-)
Protein domain: automated matches (1)
(-)
Sulfolobus turreted icosahedral virus [TaxId: 269145] (1)
2CO5B:F93 FROM STIV, A WINGED-HELIX DNA-BINDING PROTEIN
(-)
Protein domain: Hypothetical protein F93 (1)
(-)
Sulfolobus virus-like particle SSV1 [TaxId: 244589] (1)
1TBXA:; B:CRYSTAL STRUCTURE OF SSV1 F-93
(-)
Protein domain: STIV F93 (1)
(-)
Sulfolobus turreted icosahedral virus [TaxId: 269145] (1)
2CO5A:5-93F93 FROM STIV, A WINGED-HELIX DNA-BINDING PROTEIN
(-)
Protein domain: Uncharacterized protein APE0880.1 (1)
(-)
Aeropyrum pernix [TaxId: 56636] (1)
2PG4A:1-92; B:CRYSTAL STRUCTURE OF A PUTATIVE DNA BINDING PROTEIN (APE_0880A) FROM AEROPYRUM PERNIX K1 AT 2.21 A RESOLUTION
(-)
Family: FaeA-like (1)
(-)
Protein domain: P fimbrial regulatory protein PapI (1)
(-)
Escherichia coli [TaxId: 562] (1)
2HTJA:1-73NMR STRUCTURE OF E.COLI PAPI
(-)
Family: Forkhead DNA-binding domain (17)
(-)
Protein domain: Adipocyte-transcription factor FREAC-11 (s12, fkh-14) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1D5VA:SOLUTION STRUCTURE OF THE FORKHEAD DOMAIN OF THE ADIPOCYTE-TRANSCRIPTION FACTOR FREAC-11 (S12)
(-)
Protein domain: Afx (Foxo4) (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1E17A:SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF THE HUMAN FORKHEAD TRANSCRIPTION FACTOR AFX (FOXO4)
3L2CA:CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF FOXO4 BOUND TO DNA
(-)
Protein domain: automated matches (9)
(-)
Human (Homo sapiens) [TaxId: 9606] (7)
1VTNC:CO-CRYSTAL STRUCTURE OF THE HNF-3/FORK HEAD DNA-RECOGNITION MOTIF RESEMBLES HISTONE H5
2C6YA:; B:CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA
2K86A:SOLUTION STRUCTURE OF FOXO3A FORKHEAD DOMAIN
3CO6C:CRYSTAL STRUCTURE OF FOXO1 DBD BOUND TO DBE1 DNA
3CO7C:; F:CRYSTAL STRUCTURE OF FOXO1 DBD BOUND TO DBE2 DNA
3COAC:; F:CRYSTAL STRUCTURE OF FOXO1 DBD BOUND TO IRE DNA
3QRFF:; G:; H:; I:STRUCTURE OF A DOMAIN-SWAPPED FOXP3 DIMER
(-)
Mouse (Mus musculus) [TaxId: 10090] (2)
2A3SA:SOLUTION STRUCTURE AND DYNAMICS OF DNA-BINDING DOMAIN OF MYOCYTE NUCLEAR FACTOR
2D2WA:SOLUTION STRUCTURE AND DYNAMICS OF THE DNA-BINDING DOMAIN OF MYOCYTE NUCLEAR FACTOR
(-)
Protein domain: Forkhead box protein P2, FOXP2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2A07F:503-584CRYSTAL STRUCTURE OF FOXP2 BOUND SPECIFICALLY TO DNA.
(-)
Protein domain: Genesis (2)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (2)
2HDCA:STRUCTURE OF TRANSCRIPTION FACTOR GENESIS/DNA COMPLEX
2HFHA:THE NMR STRUCTURES OF A WINGED HELIX PROTEIN: GENESIS, 20 STRUCTURES
(-)
Protein domain: HFH-1 (HNF-3 forkhead homolog-1) (1)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1KQ8A:SOLUTION STRUCTURE OF WINGED HELIX PROTEIN HFH-1
(-)
Protein domain: Interleukin enhancer binding factor (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1JXSA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF INTERLEUKIN ENHANCER BINDING FACTOR
(-)
Family: FtsK C-terminal domain-like (4)
(-)
Protein domain: automated matches (2)
(-)
Pseudomonas aeruginosa [TaxId: 287] (2)
2VE8A:; B:; C:; D:; E:; F:; G:; H:XRAY STRUCTURE OF FTSK GAMMA DOMAIN (P. AERUGINOSA)
2VE9A:; C:; D:; E:; F:; B:XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA)
(-)
Protein domain: DNA translocase FtsK (2)
(-)
Escherichia coli [TaxId: 562] (1)
2J5PA:1261-1329E. COLI FTSK GAMMA DOMAIN
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2J5OA:742-811PSEUDOMONAS AERUGINOSA FTSK GAMMA DOMAIN
(-)
Family: FUR-like (1)
(-)
Protein domain: Ferric uptake regulation protein, FUR (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
1MZBA:FERRIC UPTAKE REGULATOR
(-)
Family: GntR-like transcriptional regulators (8)
(-)
Protein domain: Fatty acid responsive transcription factor FadR, N-terminal domain (5)
(-)
Escherichia coli [TaxId: 562] (5)
1E2XA:6-78FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI
1H9GA:5-78FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI, IN COMPLEX WITH MYRISTOYL-COA
1H9TA:5-78; B:5-78FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
1HW1A:5-78; B:5-78THE FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ESCHERICHIA COLI
1HW2A:7-78; B:7-78FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
(-)
Protein domain: Putative transcriptional regulator RHA1_ro03477 (1)
(-)
Rhodococcus sp. RHA1 [TaxId: 101510] (1)
2HS5A:25-93STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR GNTR FROM RHODOCOCCUS SP. RHA1
(-)
Protein domain: Transcriptional regulator YydK (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
3BWGA:5-82; B:1-81; C:3-79THE CRYSTAL STRUCTURE OF POSSIBLE TRANSCRIPTIONAL REGULATOR YYDK FROM BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168
(-)
Protein domain: Transcriptional repressor TraR, N-terminal domain (1)
(-)
Streptomyces sp. [TaxId: 1931] (1)
1V4RA:1-100SOLUTION STRUCTURE OF STREPTMYCAL REPRESSOR TRAR
(-)
Family: Heat-inducible transcription repressor HrcA, N-terminal domain (1)
(-)
Protein domain: Heat-inducible transcription repressor HrcA, N-terminal domain (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
1STZA:14-100; B:11-95; C:11-95CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN AT 2.2 A RESOLUTION
(-)
Family: Heat-shock transcription factor (12)
(-)
Protein domain: automated matches (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2LDUA:SOLUTION NMR STRUCTURE OF HEAT SHOCK FACTOR PROTEIN 1 DNA BINDING DOMAIN FROM HOMO SAPIENS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR3023C
(-)
Protein domain: Heat-shock transcription factor (11)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (2)
1HKSA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR
1HKTA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR
(-)
Milk yeast (Kluyveromyces lactis) [TaxId: 28985] (9)
1FBQA:; B:HEAT SHOCK TRANSCRIPTION FACTOR DNA BINDING DOMAIN CONTAINING THE P237K MUTATION
1FBSA:; B:HEAT SHOCK TRANSCRIPTION FACTOR DNA BINDING DOMAIN CONTAINING THE P237A MUTATION
1FBUA:; B:HEAT SHOCK TRANSCRIPTION FACTOR DNA BINDING DOMAIN
1FYKA:SERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA THAT IS TRANSLATIONALLY DISORDERED
1FYLA:; B:SERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A HEAD-TO-HEAD ORIENTATION
1FYMA:; B:SERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A TAIL-TO-TAIL ORIENTATION
2HTSA:CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF THE HEAT SHOCK TRANSCRIPTION FACTOR
3HSFA:HEAT SHOCK TRANSCRIPTION FACTOR (HSF)
3HTSB:HEAT SHOCK TRANSCRIPTION FACTOR/DNA COMPLEX
(-)
Family: Helicase DNA-binding domain (13)
(-)
Protein domain: CDC6, C-terminal domain (1)
(-)
Pyrobaculum aerophilum [TaxId: 13773] (1)
1FNNA:277-388; B:277-388CRYSTAL STRUCTURE OF CDC6P FROM PYROBACULUM AEROPHILUM
(-)
Protein domain: CDC6-like protein APE0152, C-terminal domain (2)
(-)
Aeropyrum pernix [TaxId: 56636] (2)
1W5SA:300-409; B:300-409STRUCTURE OF THE AEROPYRUM PERNIX ORC2 PROTEIN (ADP FORM)
1W5TA:300-409; B:300-409; C:300-409STRUCTURE OF THE AEROPYRUM PERNIX ORC2 PROTEIN (ADPNP-ADP COMPLEXES)
(-)
Protein domain: Holliday junction helicase RuvB (9)
(-)
Thermotoga maritima [TaxId: 2336] (6)
1IN4A:255-329THERMOTOGA MARITIMA RUVB HOLLIDAY JUNCTION BRANCH MIGRATION MOTOR
1IN5A:255-329THERMOGOTA MARITIMA RUVB A156S MUTANT
1IN6A:255-329THERMOTOGA MARITIMA RUVB K64R MUTANT
1IN7A:255-329THERMOTOGA MARITIMA RUVB R170A
1IN8A:255-329THERMOTOGA MARITIMA RUVB T158V
1J7KA:255-329THERMOTOGA MARITIMA RUVB P216G MUTANT
(-)
Thermus thermophilus [TaxId: 274] (3)
1HQCA:243-318; B:243-318STRUCTURE OF RUVB FROM THERMUS THERMOPHILUS HB8
1IXRC:243-312RUVA-RUVB COMPLEX
1IXSB:243-318STRUCTURE OF RUVB COMPLEXED WITH RUVA DOMAIN III
(-)
Protein domain: Hypothetical protein SSO1545, C-terminal domain (1)
(-)
Sulfolobus solfataricus [TaxId: 2287] (1)
2FNAA:284-356; B:284-356CRYSTAL STRUCTURE OF AN ARCHAEAL AAA+ ATPASE (SSO1545) FROM SULFOLOBUS SOLFATARICUS P2 AT 2.00 A RESOLUTION
(-)
Family: HxlR-like (6)
(-)
Protein domain: automated matches (1)
(-)
Enterococcus faecalis [TaxId: 226185] (1)
1Z7UB:CRYSTAL STRUCTURE OF THE PUTITIVE TRANSCRIPTIONAL REGULATOR OF MARR FAMILY FROM ENTEROCOCCUS FAECALIS V583
(-)
Protein domain: Hypothetical protein EF0647 (1)
(-)
Enterococcus faecalis [TaxId: 1351] (1)
1Z7UA:1-108CRYSTAL STRUCTURE OF THE PUTITIVE TRANSCRIPTIONAL REGULATOR OF MARR FAMILY FROM ENTEROCOCCUS FAECALIS V583
(-)
Protein domain: Hypothetical protein PA1607 (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2F2EA:5-146; B:CRYSTAL STRUCTURE OF PA1607, A PUTATIVE TRANSCRIPTION FACTOR
(-)
Protein domain: Hypothetical protein PG0823 (1)
(-)
Porphyromonas gingivalis [TaxId: 837] (1)
2FSWA:3-104; B:CRYSTAL STRUCTURE OF THE PUTATIVE TRANSCRIPTIONAL REGUALATOR, MARR FAMILY FROM PORPHYROMONAS GINGIVALIS W83
(-)
Protein domain: Putative transcriptional regulator YtcD (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
2HZTA:4-98CRYSTAL STRUCTURE OF A PUTATIVE HTH-TYPE TRANSCRIPTIONAL REGULATOR YTCD
(-)
Protein domain: Putative transcriptional regulator YtfH (1)
(-)
Salmonella typhimurium [TaxId: 90371] (1)
1YYVA:9-122; B:PUTATIVE TRANSCRIPTIONAL REGULATOR YTFH FROM SALMONELLA TYPHIMURIUM
(-)
Family: Hypothetical protein PH1932 (2)
(-)
Protein domain: Hypothetical protein PH1932 (2)
(-)
Pyrococcus horikoshii [TaxId: 53953] (2)
1ULYA:CRYSTAL STRUCTURE ANALYSIS OF THE ARSR HOMOLOGUE DNA-BINDING PROTEIN FROM P. HORIKOSHII OT3
2CWEA:2-192CRYSTAL STRUCTURE OF HYPOTHETICAL TRANSCRIPTIONAL REGULATOR PROTEIN, PH1932 FROM PYROCOCCUS HORIKOSHII OT3
(-)
Family: Hypothetical protein YhgG (3)
(-)
Protein domain: automated matches (2)
(-)
Klebsiella pneumoniae [TaxId: 573] (1)
4AWXB:MOONLIGHTING FUNCTIONS OF FEOC IN THE REGULATION OF FERROUS IRON TRANSPORT IN FEO
(-)
Klebsiella pneumoniae [TaxId: 72407] (1)
2K02A:SOLUTION STRUCTURE OF PUTATIVE FERROUS IRON TRANSPORT PROTEIN C (FEOC) OF KLEBSIELLA PNEUMONIAE
(-)
Protein domain: Hypothetical protein YhgG (1)
(-)
Escherichia coli [TaxId: 562] (1)
1XN7A:SOLUTION STRUCTURE OF E.COLI PROTEIN YHGG: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ET95
(-)
Family: Interferon regulatory factor (8)
(-)
Protein domain: automated matches (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
3QU6A:; B:; C:CRYSTAL STRUCTURE OF IRF-3 DBD FREE FORM
(-)
Protein domain: Interferon regulatory factor 1 (IRF-1) (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1IF1A:; B:INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
(-)
Protein domain: Interferon regulatory factor 3, IRF-3 (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1T2KA:; B:STRUCTURE OF THE DNA BINDING DOMAINS OF IRF3, ATF-2 AND JUN BOUND TO DNA
2O6GE:; F:; G:; H:CRYSTAL STRUCTURE OF IRF-3 BOUND TO THE INTERFERON-B ENHANCER
2PI0A:; B:; C:; D:CRYSTAL STRUCTURE OF IRF-3 BOUND TO THE PRDIII-I REGULATORY ELEMENT OF THE HUMAN INTERFERON-B ENHANCER
(-)
Protein domain: Interferon regulatory factor-2, IRF-2 (3)
(-)
Mouse (Mus musculus) [TaxId: 10090] (3)
1IRFA:INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
1IRGA:INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES
2IRFG:; H:; I:; J:; K:; L:CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
(-)
Family: Iron-dependent repressor protein (44)
(-)
Protein domain: automated matches (7)
(-)
Bacillus subtilis [TaxId: 1423] (3)
3R60A:4-62; B:4-62STRUCTURE OF THE MNTR FE2+ COMPLEX
3R61A:4-62; B:4-62STRUCTURE OF THE MNTR CO2+ COMPLEX
4HX4A:3-62; B:3-62STRUCTURE OF MNTR MUTANT E11K COMPLEXED WITH MN2+
(-)
Bacillus subtilis [TaxId: 224308] (4)
4HV5A:5-62; B:4-62STRUCTURE OF THE MNTR FE2+ COMPLEX WITH E SITE METAL BINDING
4HV6A:2-62; B:4-62STRUCTURE OF MNTR H77A MUTANT IN APO- AND MN-BOUND FORMS
4HX7A:4-62; B:3-62STRUCTURE OF MNTR E11K MUTANT COMPLEXED WITH CD2+
4HX8A:5-62; B:4-62STRUCTURE OF METAL-FREE MNTR MUTANT E11K
(-)
Protein domain: Diphtheria toxin repressor (DtxR) (20)
(-)
Corynebacterium diphtheriae [TaxId: 1717] (20)
1BI0A:4-64STRUCTURE OF APO-AND HOLO-DIPHTHERIA TOXIN REPRESSOR
1BI1A:4-64STRUCTURE OF APO-AND HOLO-DIPHTHERIA TOXIN REPRESSOR
1BI2A:3-64; B:3-64STRUCTURE OF APO-AND HOLO-DIPHTHERIA TOXIN REPRESSOR
1BI3A:4-64; B:4-64STRUCTURE OF APO-AND HOLO-DIPHTHERIA TOXIN REPRESSOR
1C0WA:2-64; B:2-64; C:2-64; D:2-64CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR-DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN
1DDNA:3-64; B:3-64; C:3-64; D:3-64DIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX
1DPRA:3-64; B:3-64STRUCTURES OF THE APO-AND METAL ION ACTIVATED FORMS OF THE DIPHTHERIA TOX REPRESSOR FROM CORYNEBACTERIUM DIPHTHERIAE
1F5TA:1002-1064; B:2002-2064; C:3002-3064; D:4002-4064DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE
1FWZA:4-64GLU20ALA DTXR
1G3SA:4-64CYS102SER DTXR
1G3TA:3-64; B:1003-1064CYS102SER DTXR
1G3WA:4-64CD-CYS102SER DTXR
1G3YA:3-64ARG80ALA DTXR
1P92A:1-64CRYSTAL STRUCTURE OF (H79A)DTXR
1XCVA:1-64CRYSTAL STRUCTURE OF (H79AC102D)DTXR COMPLEXED WITH NICKEL(II)
2DTRA:4-64STRUCTURE OF DIPHTHERIA TOXIN REPRESSOR
2QQ9A:3-64CRYSTAL STRUCTURE OF DTXR(D6A C102D) COMPLEXED WITH NICKEL(II)
2QQAA:3-64CRYSTAL STRUCTURE OF DTXR(E9A C102D) COMPLEXED WITH NICKEL(II)
2QQBA:3-64CRYSTAL STRUCTURE OF DTXR(M10A C102D) COMPLEXED WITH NICKEL(II)
2TDXA:1-64DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL
(-)
Protein domain: Iron-dependent regulator IdeR (6)
(-)
Mycobacterium tuberculosis [TaxId: 1773] (6)
1B1BA:1-64IRON DEPENDENT REGULATOR
1FX7A:1-64; B:1-64; C:1-64; D:1-64CRYSTAL STRUCTURE OF THE IRON-DEPENDENT REGULATOR (IDER) FROM MYCOBACTERIUM TUBERCULOSIS
1U8RA:1-64; B:1-64; C:1-64; D:1-64; G:1-64; H:1-64; I:1-64; J:1-64CRYSTAL STRUCTURE OF AN IDER-DNA COMPLEX REVEALS A CONFORMATIONAL CHANGE IN ACTIVATED IDER FOR BASE-SPECIFIC INTERACTIONS
2ISYA:2-64; B:2-64CRYSTAL STRUCTURE OF THE NICKEL-ACTIVATED TWO-DOMAIN IRON-DEPENDENT REGULATOR (IDER)
2ISZA:1-64; B:1-64; C:1-64; D:1-64CRYSTAL STRUCTURE OF A TWO-DOMAIN IDER-DNA COMPLEX CRYSTAL FORM I
2IT0A:3-64; B:3-64; C:3-64; D:3-64CRYSTAL STRUCTURE OF A TWO-DOMAIN IDER-DNA COMPLEX CRYSTAL FORM II
(-)
Protein domain: Manganese transport regulator MntR (11)
(-)
Bacillus subtilis [TaxId: 1423] (11)
1ON1A:2-62; B:2-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO MANGANESE, AB CONFORMATION.
1ON2A:2-62; B:2-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR), D8M MUTANT, BOUND TO MANGANESE
2EV0A:2-62; B:2-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO CADMIUM
2EV5A:3-62; B:4-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO CALCIUM
2EV6A:4-62; B:4-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO ZINC
2F5CA:3-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO MANGANESE, HEXAGONAL CRYSTAL FORM
2F5DA:3-62; B:2-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO MANGANESE, AC CONFORMATION, PH 6.5
2F5EA:2-62; B:2-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO MANGANESE, AB CONFORMATION, PH 6.5
2F5FA:4-62; B:2-62BACILLUS SUBTILIS MANGANESE TRANSPORT REGULATOR (MNTR) BOUND TO MANGANESE, AC CONFORMATION, PH 8.5
2HYFA:3-62; B:3-62; C:2-62; D:2-62THE STRUCTURE OF APO-MNTR FROM BACILLUS SUBTILIS, SELENOMETHIONINE DERIVATIVE
2HYGD:3-62THE STRUCTURE OF APO-MNTR FROM BACILLUS SUBTILIS, NATIVE FORM
(-)
Family: La domain (9)
(-)
Protein domain: La-related protein 4 LARP4 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CQKA:43-130SOLUTION STRUCTURE OF THE LA DOMAIN OF C-MPL BINDING PROTEIN
(-)
Protein domain: Lupus La autoantigen N-terminal domain (8)
(-)
Human (Homo sapiens) [TaxId: 9606] (7)
1S7AA:NMR STRUCTURE OF THE LA MOTIF OF HUMAN LA PROTEIN
1YTYA:6-103; B:7-103STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN
1ZH5A:5-103; B:6-103STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN
2VODA:6-103; B:6-103CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAUUUU
2VONA:6-103; B:7-103CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAAUUU
2VOOA:10-103; B:9-103CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER UUUUUUUU
2VOPA:8-103CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUUUU
(-)
Trypanosome (Trypanosoma brucei) [TaxId: 5691] (1)
1S29A:LA AUTOANTIGEN N-TERMINAL DOMAIN
(-)
Family: LexA repressor, N-terminal DNA-binding domain (4)
(-)
Protein domain: LexA repressor, N-terminal DNA-binding domain (4)
(-)
Escherichia coli [TaxId: 562] (4)
1JHFA:2-72LEXA G85D MUTANT
1JHHA:2-72LEXA S119A MUTANT
1LEAA:SOLUTION STRUCTURE OF THE LEXA REPRESSOR DNA BINDING DETERMINED BY 1H NMR SPECTROSCOPY
1LEBA:SOLUTION STRUCTURE OF THE LEXA REPRESSOR DNA BINDING DETERMINED BY 1H NMR SPECTROSCOPY
(-)
Family: Linker histone H1/H5 (6)
(-)
Protein domain: Histone H1 homologue Hho1p (4)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (4)
1UHMA:SOLUTION STRUCTURE OF THE GLOBULAR DOMAIN OF LINKER HISTONE HOMOLOG HHO1P FROM S. CEREVISIAE
1USSA:YEAST HISTONE H1 GLOBULAR DOMAIN II, HHO1P GII, SOLUTION NMR STRUCTURES
1USTA:YEAST HISTONE H1 GLOBULAR DOMAIN I, HHO1P GI, SOLUTION NMR STRUCTURES
1YQAA:171-257ENGINEERING THE STRUCTURAL STABILITY AND FUNCTIONAL PROPERTIES OF THE GI DOMAIN INTO THE INTRINSICALLY UNFOLDED GII DOMAIN OF THE YEAST LINKER HISTONE HHO1P
(-)
Protein domain: Histone H1, globular domain (1)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (1)
1GHCA:HOMO-AND HETERONUCLEAR TWO-DIMENSIONAL NMR STUDIES OF THE GLOBULAR DOMAIN OF HISTONE H1: FULL ASSIGNMENT, TERTIARY STRUCTURE, AND COMPARISON WITH THE GLOBULAR DOMAIN OF HISTONE H5
(-)
Protein domain: Histone H5, globular domain (1)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (1)
1HSTA:; B:CRYSTAL STRUCTURE OF GLOBULAR DOMAIN OF HISTONE H5 AND ITS IMPLICATIONS FOR NUCLEOSOME BINDING
(-)
Family: Lrp/AsnC-like transcriptional regulator N-terminal domain (7)
(-)
Protein domain: LprA (1)
(-)
Pyrococcus furiosus [TaxId: 2261] (1)
1I1GA:2-61; B:2-61CRYSTAL STRUCTURE OF THE LRP-LIKE TRANSCRIPTIONAL REGULATOR FROM THE ARCHAEON PYROCOCCUS FURIOSUS
(-)
Protein domain: Putative transcriptional regulator PH1519 (4)
(-)
Pyrococcus horikoshii [TaxId: 53953] (4)
1RI7A:25-84CRYSTAL STRUCTURE OF A PROTEIN IN THE LRP/ASNC FAMILY FROM THE HYPERTHERMOPHILIC ARCHAEON PYROCOCCUS SP. OT3
2E1CA:24-84STRUCTURE OF PUTATIVE HTH-TYPE TRANSCRIPTIONAL REGULATOR PH1519/DNA COMPLEX
2ZNYA:25-84; B:25-84; C:25-84; D:25-84; E:25-84; F:25-84; G:25-84; H:25-84CRYSTAL STRUCTURE OF THE FFRP
2ZNZA:25-84; B:25-84; C:27-84; D:25-84; E:25-84; F:25-84; G:25-84; H:25-84CRYSTAL STRUCTURE OF FFRP
(-)
Protein domain: Regulatory protein AsnC (1)
(-)
Escherichia coli [TaxId: 562] (1)
2CG4A:4-66; B:4-66STRUCTURE OF E.COLI ASNC
(-)
Protein domain: Transcriptional regulator LrpC (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
2CFXA:1-63; B:1-63; C:1-63; D:1-63; E:1-63; F:1-63; G:1-63; H:1-63STRUCTURE OF B.SUBTILIS LRPC
(-)
Family: LysR-like transcriptional regulators (3)
(-)
Protein domain: LysR-type regulatory protein CbnR (2)
(-)
Ralstonia eutropha [TaxId: 106590] (2)
1IXCA:1-89; B:1-89CRYSTAL STRUCTURE OF CBNR, A LYSR FAMILY TRANSCRIPTIONAL REGULATOR
1IZ1A:1-89; B:1-89; P:1-89; Q:1-89CRYSTAL STRUCTURE OF CBNR, A LYSR FAMILY TRANSCRIPTIONAL REGULATOR
(-)
Protein domain: Probable LysR-type transcriptional regulator PA0477 (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2ESNA:3-91; B:2-91; C:2-91; D:3-91THE CRYSTAL STRUCTURE OF PROBABLE TRANSCRIPTIONAL REGULATOR PA0477 FROM PSEUDOMONAS AERUGINOSA
(-)
Family: Marine metagenome family WH1 (1)
(-)
Protein domain: Hypothetical protein GOS_3836187 (1)
(-)
Environmental samples (1)
2OD5A:6-96CRYSTAL STRUCTURE OF A PUTATIVE NUCLEIC ACID BINDING PROTEIN (JCVI_PEP_1096688149193) FROM UNCULTURED MARINE ORGANISM AT 1.79 A RESOLUTION
(-)
Family: MarR-like transcriptional regulators (34)
(-)
Protein domain: automated matches (7)
(-)
Deinococcus radiodurans [TaxId: 1299] (1)
2FBKB:THE CRYSTAL STRUCTURE OF HUCR FROM DEINOCOCCUS RADIODURANS
(-)
Escherichia coli K-12 [TaxId: 83333] (4)
3VB2A:; B:CRYSTAL STRUCTURE OF THE REDUCED FORM OF MARR FROM E.COLI
3VODA:; B:CRYSTAL STRUCTURE OF MUTANT MARR C80S FROM E.COLI
3VOEA:; B:CRYSTAL STRUCTURE OF WILD TYPE MARR (APO FORM) FROM E.COLI
4JBAA:; B:CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF MARR FROM E.COLI
(-)
Thermotoga maritima [TaxId: 2336] (1)
2A61B:; C:; D:THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR TM0710 FROM THERMOTOGA MARITIMA
(-)
Yersinia pseudotuberculosis [TaxId: 502800] (1)
4AIHA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF ROVA FROM YERSINIA IN ITS FREE FORM
(-)
Protein domain: Hypothetical protein PH1061 (1)
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
1UB9A:STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR HOMOLOGUE PROTEIN FROM PYROCOCCUS HORIKOSHII OT3
(-)
Protein domain: MexR repressor (3)
(-)
Pseudomonas aeruginosa [TaxId: 287] (3)
1LNWA:; G:; H:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE MEXR REPRESSOR OF THE MEXAB-OPRM MULTIDRUG EFFLUX OPERON OF PSEUDOMONAS AERUGINOSA
3ECHA:; B:THE MARR-FAMILY REPRESSOR MEXR IN COMPLEX WITH ITS ANTIREPRESSOR ARMR
3MEXA:; B:CRYSTAL STRUCTURE OF MEXR IN OXIDIZED STATE
(-)
Protein domain: Multiple antibiotic resistance repressor, MarR (1)
(-)
Escherichia coli [TaxId: 562] (1)
1JGSA:MULTIPLE ANTIBIOTIC RESISTANCE REPRESSOR, MARR
(-)
Protein domain: Organic hydroperoxide resistance transcriptional regulator OhrR (2)
(-)
Bacillus subtilis [TaxId: 1423] (2)
1Z91A:8-144X-RAY CRYSTAL STRUCTURE OF APO-OHRRC15S IN REDUCED FORM: MARR FAMILY PROTEIN
1Z9CA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA
(-)
Protein domain: Pleiotropic regulator of virulence genes, SarA (3)
(-)
Staphylococcus aureus [TaxId: 1280] (3)
1FZPB:; D:CRYSTAL STRUCTURES OF SARA: A PLEIOTROPIC REGULATOR OF VIRULENCE GENES IN S. AUREUS
2FNPA:103-224; B:CRYSTAL STRUCTURE OF SARA
2FRHA:; B:CRYSTAL STRUCTURE OF SARA, A TRANSCRIPTION REGULATOR FROM STAPHYLOCOCCUS AUREUS
(-)
Protein domain: Probable transcriptional regulator PA3067 (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2HR3A:2-146; B:; C:; D:CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN FROM PSEUDOMONAS AERUGINOSA PA01 AT 2.4 A RESOLUTION
(-)
Protein domain: Probable transcriptional regulator PA4135 (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2FBIA:5-140THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR PA4135
(-)
Protein domain: Protease production regulatory protein Hpr (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
2FXAA:6-167; B:; C:; D:STRUCTURE OF THE PROTEASE PRODUCTION REGULATORY PROTEIN HPR FROM BACILLUS SUBTILIS.
(-)
Protein domain: Putative transcriptional regulator TM0816 (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
2ETHA:1-140; B:CRYSTAL STRUCTURE OF A MARR-LIKE TRANSCRIPTIONAL REGULATOR (TM0816) FROM THERMOTOGA MARITIMA AT 2.50 A RESOLUTION
(-)
Protein domain: Putative transcriptional regulator YusO (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1S3JA:; B:X-RAY CRYSTAL STRUCTURE OF YUSO PROTEIN FROM BACILLUS SUBTILIS
(-)
Protein domain: Staphylococcal accessory regulator A homolog, SarR (1)
(-)
Staphylococcus aureus [TaxId: 1280] (1)
1HSJA:373-487; B:373-487SARR MBP FUSION STRUCTURE
(-)
Protein domain: Staphylococcal accessory regulator A homolog, SarS (1)
(-)
Staphylococcus aureus [TaxId: 1280] (1)
1P4XA:1-125; A:126-250CRYSTAL STRUCTURE OF SARS PROTEIN FROM STAPHYLOCOCCUS AUREUS
(-)
Protein domain: Ta1064 (RFK), N-terminal domain (1)
(-)
Thermoplasma acidophilum [TaxId: 2303] (1)
3CTAA:5-89CRYSTAL STRUCTURE OF RIBOFLAVIN KINASE FROM THERMOPLASMA ACIDOPHILUM
(-)
Protein domain: Transcriptional regulator DR1159 (1)
(-)
Deinococcus radiodurans [TaxId: 1299] (1)
2FBKA:8-179THE CRYSTAL STRUCTURE OF HUCR FROM DEINOCOCCUS RADIODURANS
(-)
Protein domain: Transcriptional regulator MgrA (1)
(-)
Staphylococcus aureus [TaxId: 1280] (1)
2BV6A:5-140CRYSTAL STRUCTURE OF MGRA, A GLOBAL REGULATOR AND MAJOR VIRULENCE DETERMINANT IN STAPHYLOCOCCUS AUREUS
(-)
Protein domain: Transcriptional regulator OEOE1854 (1)
(-)
Oenococcus oeni [TaxId: 1247] (1)
3BROA:3-137; B:; C:; D:CRYSTAL STRUCTURE OF THE TRANSCRIPTION REGULATOR MARR FROM OENOCOCCUS OENI PSU-1
(-)
Protein domain: Transcriptional regulator PA3341 (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2FBHA:8-144THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR PA3341
(-)
Protein domain: Transcriptional regulator SlyA (4)
(-)
Enterococcus faecalis [TaxId: 1351] (1)
1LJ9A:; B:THE CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR SLYA
(-)
Salmonella typhimurium [TaxId: 90371] (3)
3DEUA:2-141; B:CRYSTAL STRUCTURE OF TRANSCRIPTION REGULATORY PROTEIN SLYA FROM SALMONELLA TYPHIMURIUM IN COMPLEX WITH SALICYLATE LIGANDS
3Q5FA:; B:CRYSTAL STRUCTURE OF THE SALMONELLA TRANSCRIPTIONAL REGULATOR SLYA IN COMPLEX WITH DNA
3QPTA:CRYSTAL STRUCTURE OF THE SALMONELLA TRANSCRIPTIONAL REGULATOR SLYA
(-)
Protein domain: Transcriptional regulator TM0710 (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
2A61A:5-143THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR TM0710 FROM THERMOTOGA MARITIMA
(-)
Family: MerB N-terminal domain-like (7)
(-)
Protein domain: Alkylmercury lyase MerB (7)
(-)
Escherichia coli [TaxId: 562] (7)
1S6LA:21-80SOLUTION STRUCTURE OF MERB, THE ORGANOMERCURIAL LYASE INVOLVED IN THE BACTERIAL MERCURY RESISTANCE SYSTEM
3F0OA:1-80; B:1-80CRYSTAL STRUCTURE OF MERB, THE ORGANOMERCURIAL LYASE INVOLVED IN A BACTERIAL MERCURY RESISTANCE SYSTEM
3F0PA:1-80; B:1-80CRYSTAL STRUCTURE OF THE MERCURY-BOUND FORM OF MERB, THE ORGANOMERCURIAL LYASE INVOLVED IN A BACTERIAL MERCURY RESISTANCE SYSTEM
3F2FA:1-80; B:1-80CRYSTAL STRUCTURE OF THE MERCURY-BOUND FORM OF MERB, THE ORGANOMERCURIAL LYASE INVOLVED IN A BACTERIAL MERCURY RESISTANCE SYSTEM
3F2GA:1-80; B:1-80CRYSTAL STRUCTURE OF MERB MUTANT C160S, THE ORGANOMERCURIAL LYASE INVOLVED IN A BACTERIAL MERCURY RESISTANCE SYSTEM
3F2HA:1-80; B:1-80CRYSTAL STRUCTURE OF THE MERCURY-BOUND FORM OF MERB MUTANT C160S, THE ORGANOMERCURIAL LYASE INVOLVED IN A BACTERIAL MERCURY RESISTANCE SYSTEM
3FN8A:1-80; B:1-80CRYSTAL STRUCTURE OF MERB COMPLEXED WITH MERCURY
(-)
Family: Methionine aminopeptidase, insert domain (23)
(-)
Protein domain: Methionine aminopeptidase, insert domain (23)
(-)
Human (Homo sapiens) [TaxId: 9606] (18)
1B59A:375-448COMPLEX OF HUMAN METHIONINE AMINOPEPTIDASE-2 COMPLEXED WITH OVALICIN
1B6AA:375-448HUMAN METHIONINE AMINOPEPTIDASE 2 COMPLEXED WITH TNP-470
1BN5A:375-448HUMAN METHIONINE AMINOPEPTIDASE 2
1BOAA:375-448HUMAN METHIONINE AMINOPEPTIDASE 2 COMPLEXED WITH ANGIOGENESIS INHIBITOR FUMAGILLIN
1KQ0A:375-448HUMAN METHIONINE AMINOPEPTIDASE TYPE II IN COMPLEX WITH D-METHIONINE
1KQ9A:375-448HUMAN METHIONINE AMINOPEPTIDASE TYPE II IN COMPLEX WITH L-METHIONINE
1QZYA:375-448HUMAN METHIONINE AMINOPEPTIDASE IN COMPLEX WITH BENGAMIDE INHIBITOR LAF153 AND COBALT
1R58A:375-448CRYSTAL STRUCTURE OF METAP2 COMPLEXED WITH A357300
1R5GA:375-448CRYSTAL STRUCTURE OF METAP2 COMPLEXED WITH A311263
1R5HA:375-448CRYSTAL STRUCTURE OF METAP2 COMPLEXED WITH A320282
1YW7A:375-448H-METAP2 COMPLEXED WITH A444148
1YW8A:375-448H-METAP2 COMPLEXED WITH A751277
1YW9A:375-448H-METAP2 COMPLEXED WITH A849519
2ADUA:375-448HUMAN METHIONINE AMINOPEPTIDASE COMPLEX WITH 4-ARYL-1,2,3-TRIAZOLE INHIBITOR
2EA2A:375-448H-METAP2 COMPLEXED WITH A773812
2EA4A:375-448H-METAP2 COMPLEXED WITH A797859
2GA2A:375-448H-METAP2 COMPLEXED WITH A193400
2OAZA:375-448HUMAN METHIONINE AMINOPEPTIDASE-2 COMPLEXED WITH SB-587094
(-)
Pyrococcus furiosus [TaxId: 2261] (5)
1WKMA:195-271; B:195-271THE PRODUCT BOUND FORM OF THE MN(II)LOADED METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
1XGMA:195-271; B:195-271METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
1XGNA:195-271; B:195-271METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
1XGOA:195-271METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
1XGSA:195-271; B:195-271METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
(-)
Family: MukF N-terminal domain-like (1)
(-)
Protein domain: Chromosome partition protein MukF (KicB), N-terminal domain (1)
(-)
Escherichia coli [TaxId: 562] (1)
1T98A:8-118; B:5-118CRYSTAL STRUCTURE OF MUKF(1-287)
(-)
Family: N-terminal domain of Bacillus PurR (2)
(-)
Protein domain: N-terminal domain of Bacillus PurR (2)
(-)
Bacillus subtilis [TaxId: 1423] (2)
1O57A:2-74; B:1-74; C:1-74; D:2-74CRYSTAL STRUCTURE OF THE PURINE OPERON REPRESSOR OF BACILLUS SUBTILIS
1P4AA:2-74; B:2-74; C:2-74; D:2-74CRYSTAL STRUCTURE OF THE PURR COMPLEXED WITH CPRPP
(-)
Family: N-terminal domain of molybdate-dependent transcriptional regulator ModE (3)
(-)
Protein domain: N-terminal domain of molybdate-dependent transcriptional regulator ModE (3)
(-)
Escherichia coli [TaxId: 562] (3)
1B9MA:-1-126; B:-1-126REGULATOR FROM ESCHERICHIA COLI
1B9NA:-2-126; B:1-126REGULATOR FROM ESCHERICHIA COLI
1O7LA:1-126; B:1-126; C:2-126; D:2-126MOLYBDATE-ACTIVATED FORM OF MODE FROM ESCHERICHIA COLI
(-)
Family: Nudix-associated domain (2)
(-)
Protein domain: Hypothetical protein BT0354, C-terminal domain (1)
(-)
Bacteroides thetaiotaomicron [TaxId: 818] (1)
2FB1  [entry was replaced by entry 5BS6 without any SCOP domain information]
(-)
Protein domain: Hypothetical protein EF2700, C-terminal domain (1)
(-)
Enterococcus faecalis [TaxId: 1351] (1)
2FMLA:205-268; B:205-269CRYSTAL STRUCTURE OF MUTT/NUDIX FAMILY PROTEIN FROM ENTEROCOCCUS FAECALIS
(-)
Family: P4 origin-binding domain-like (2)
(-)
Protein domain: Class II MHC transcription factor RFX1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1DP7P:COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE
(-)
Protein domain: P4 origin-binding domain (1)
(-)
Bacteriophage P4 [TaxId: 10680] (1)
1KA8A:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE PHAGE P4 ORIGIN-BINDING DOMAIN
(-)
Family: PadR-like (3)
(-)
Protein domain: Hypothetical protein AphA (1)
(-)
Vibrio cholerae [TaxId: 666] (1)
1YG2A:STRUCTURE OF THE VIBRIO CHOLERAE VIRULENCE ACTIVATOR APHA
(-)
Protein domain: Hypothetical protein TM0937 (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
2ESHA:4-117CRYSTAL STRUCTURE OF CONSERVED PROTEIN OF UNKNOWN FUNCTION TM0937- A POTENTIAL TRANSCRIPTIONAL FACTOR
(-)
Protein domain: Predicted transcriptional regulator (1)
(-)
Clostridium thermocellum [TaxId: 1515] (1)
1XMAA:; B:STRUCTURE OF A TRANSCRIPTIONAL REGULATOR FROM CLOSTRIDIUM THERMOCELLUM CTH-833
(-)
Family: PCI domain (PINT motif) (2)
(-)
Protein domain: COP9 signalosome complex subunit 4, GSN4 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1UFMA:SOLUTION STRUCTURE OF THE PCI DOMAIN
(-)
Protein domain: Hypothetical protein C20orf116 homolog (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1WI9A:SOLUTION STRUCTURE OF THE PCI DOMAIN FROM MOUSE HYPOTHETICAL PROTEIN AAH51541
(-)
Family: Penicillinase repressor (10)
(-)
Protein domain: automated matches (1)
(-)
Staphylococcus aureus [TaxId: 1280] (1)
1XSDA:CRYSTAL STRUCTURE OF THE BLAI REPRESSOR IN COMPLEX WITH DNA
(-)
Protein domain: Hypothetical protein Rv1846c (1)
(-)
Mycobacterium tuberculosis [TaxId: 1773] (1)
2G9WA:3-124; B:CRYSTAL STRUCTURE OF RV1846C, A PUTATIVE TRANSCRIPTIONAL REGULATORY PROTEIN OF MYCOBACTERIUM TUBERCULOSIS
(-)
Protein domain: Methicillin resistance regulatory protein MecI (5)
(-)
Staphylococcus aureus [TaxId: 1280] (5)
1OKRA:; B:THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI.
1SAXA:; B:THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI IN COMPLEX WITH 25-BP DS-DNA
1SD6A:; B:CRYSTAL STRUCTURE OF NATIVE MECI AT 2.65 A
1SD7A:; B:CRYSTAL STRUCTURE OF A SEMET DERIVATIVE OF MECI AT 2.65 A
2D45A:5-121; C:5-121; D:7-121; B:5-121CRYSTAL STRUCTURE OF THE MECI-MECA REPRESSOR-OPERATOR COMPLEX
(-)
Protein domain: Penicillinase repressor BlaI (3)
(-)
Bacillus licheniformis [TaxId: 1402] (2)
1P6RA:SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF THE REPRESSOR BLAI.
2P7CB:1-82SOLUTION STRUCTURE OF THE BACILLUS LICHENIFORMIS BLAI MONOMERIC FORM IN COMPLEX WITH THE BLAP HALF-OPERATOR.
(-)
Staphylococcus aureus [TaxId: 1280] (1)
1SD4A:; B:CRYSTAL STRUCTURE OF A SEMET DERIVATIVE OF BLAI AT 2.0 A
(-)
Family: PF0610-like (1)
(-)
Protein domain: Hypothetical protein PF0610 (1)
(-)
Pyrococcus furiosus [TaxId: 2261] (1)
2GMGA:1-105SOLUTION NMR STRUCTURE OF PROTEIN PF0610 FROM PYROCOCCUS FURIOSUS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PFG3
(-)
Family: PF1790-like (1)
(-)
Protein domain: Transcriptional regulatory protein PF1790 (1)
(-)
Pyrococcus furiosus [TaxId: 2261] (1)
2P4WA:; B:CRYSTAL STRUCTURE OF HEAT SHOCK REGULATOR FROM PYROCOCCUS FURIOSUS
(-)
Family: PH0730 N-terminal domain-like (1)
(-)
Protein domain: Hypothetical protein PH0730 (1)
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
2P8TA:14-82HYPOTHETICAL PROTEIN PH0730 FROM PYROCOCCUS HORIKOSHII OT3
(-)
Family: Plant O-methyltransferase, N-terminal domain (12)
(-)
Protein domain: Aclacinomycin-10-hydroxylase RdmB (4)
(-)
Streptomyces purpurascens [TaxId: 1924] (4)
1QZZA:10-101CRYSTAL STRUCTURE OF ACLACINOMYCIN-10-HYDROXYLASE (RDMB) IN COMPLEX WITH S-ADENSYL-L-METHIONINE (SAM)
1R00A:10-101CRYSTAL STRUCTURE OF ACLACINOMYCIN-10-HYDROXYLASE (RDMB) IN COMPLEX WITH S-ADENSYL-L-HOMOCYSTEIN (SAH)
1XDSA:10-101; B:10-101CRYSTAL STRUCTURE OF ACLACINOMYCIN-10-HYDROXYLASE (RDMB) IN COMPLEX WITH S-ADENOSYL-L-METHIONINE (SAM) AND 11-DEOXY-BETA-RHODOMYCIN (DBRA)
1XDUA:10-101CRYSTAL STRUCTURE OF ACLACINOMYCIN-10-HYDROXYLASE (RDMB) IN COMPLEX WITH SINEFUNGIN (SFG)
(-)
Protein domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase (2)
(-)
Alfalfa (Medicago sativa) [TaxId: 3879] (2)
1KYWA:13-119; C:5-119; F:5-119CRYSTAL STRUCTURE ANALYSIS OF CAFFEIC ACID/5-HYDROXYFERULIC ACID 3/5-O-METHYLTRANSFERASE IN COMPLEX WITH 5-HYDROXYCONIFERALDEHYDE
1KYZA:13-119; C:10-119; E:5-119CRYSTAL STRUCTURE ANALYSIS OF CAFFEIC ACID/5-HYDROXYFERULIC ACID 3/5-O-METHYLTRANSFERASE FERULIC ACID COMPLEX
(-)
Protein domain: Carminomycin 4-O-methyltransferase (2)
(-)
Streptomyces peucetius [TaxId: 1950] (2)
1TW2A:14-98; B:3-98CRYSTAL STRUCTURE OF CARMINOMYCIN-4-O-METHYLTRANSFERASE (DNRK) IN COMPLEX WITH S-ADENOSYL-L-HOMOCYSTEIN (SAH) AND 4-METHOXY-E-RHODOMYCIN T (M-ET)
1TW3A:14-98; B:14-98CRYSTAL STRUCTURE OF CARMINOMYCIN-4-O-METHYLTRANSFERASE (DNRK) IN COMPLEX WITH S-ADENOSYL-L-HOMOCYSTEIN (SAH) AND 4-METHOXY-E-RHODOMYCIN T (M-ET)
(-)
Protein domain: Chalcone O-methyltransferase (2)
(-)
Alfalfa (Medicago sativa) [TaxId: 3879] (2)
1FP1D:19-128CRYSTAL STRUCTURE ANALYSIS OF CHALCONE O-METHYLTRANSFERASE
1FPQA:20-128CRYSTAL STRUCTURE ANALYSIS OF SELENOMETHIONINE SUBSTITUTED CHALCONE O-METHYLTRANSFERASE
(-)
Protein domain: Isoflavone O-methyltransferase (2)
(-)
Alfalfa (Medicago sativa) [TaxId: 3879] (2)
1FP2A:8-108CRYSTAL STRUCTURE ANALYSIS OF ISOFLAVONE O-METHYLTRANSFERASE
1FPXA:8-108CRYSTAL STRUCTURE ANALYSIS OF SELENOMETHIONINE SUBSTITUTED ISOFLAVONE O-METHYLTRANSFERASE
(-)
Family: PSPTO2686-like (1)
(-)
Protein domain: Hypothetical protein PSPTO2686 (1)
(-)
Pseudomonas syringae pv. tomato [TaxId: 323] (1)
3BZ6A:13-96; A:97-180CRYSTAL STRUCTURE OF A CONSERVED PROTEIN OF UNKNOWN FUNCTION FROM PSEUDOMONAS SYRINGAE PV. TOMATO STR. DC3000
(-)
Family: Rad21/Rec8-like (1)
(-)
Protein domain: Sister chromatid cohesion protein 1 (SCC1), C-terminal domain (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1W1WE:; F:; G:; H:SC SMC1HD:SCC1-C COMPLEX, ATPGS
(-)
Family: RecQ helicase DNA-binding domain-like (4)
(-)
Protein domain: DNA helicase RecQ DNA-binding domain (2)
(-)
Escherichia coli [TaxId: 562] (2)
1OYWA:407-516STRUCTURE OF THE RECQ CATALYTIC CORE
1OYYA:407-516STRUCTURE OF THE RECQ CATALYTIC CORE BOUND TO ATP-GAMMA-S
(-)
Protein domain: Hel308 helicase (1)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (1)
2P6RA:404-488CRYSTAL STRUCTURE OF SUPERFAMILY 2 HELICASE HEL308 IN COMPLEX WITH UNWOUND DNA
(-)
Protein domain: Werner syndrome ATP-dependent helicase WRN (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2AXLA:1-144SOLUTION STRUCTURE OF A MULTIFUNCTIONAL DNA- AND PROTEIN-BINDING DOMAIN OF HUMAN WERNER SYNDROME PROTEIN
(-)
Family: Replication initiation protein (4)
(-)
Protein domain: RepE54 (2)
(-)
Escherichia coli, mini-F plasmid [TaxId: 562] (2)
1REPC:15-143; C:144-246CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54 OF MINI-F PLASMID COMPLEXED WITH AN ITERON DNA
2Z9OA:21-143; A:144-251; B:20-143; B:144-247CRYSTAL STRUCTURE OF THE DIMERIC FORM OF REPE IN COMPLEX WITH THE REPE OPERATOR DNA
(-)
Protein domain: Replication initiation protein PI (1)
(-)
Escherichia coli [TaxId: 562] (1)
2NRAC:9-151; C:152-268CRYSTAL STRUCTURE OF PI INITIATOR PROTEIN IN COMPLEX WITH ITERON DNA
(-)
Protein domain: Replication protein A, repA (1)
(-)
Pseudomonas syringae pv. savastanoi [TaxId: 29438] (1)
1HKQA:; B:PPS10 PLASMID DNA REPLICATION INITIATOR PROTEIN REPA. REPLICATION INACTIVE, DIMERIC N-TERMINAL DOMAIN.
(-)
Family: Replication terminator protein (RTP) (7)
(-)
Protein domain: Replication terminator protein (RTP) (7)
(-)
Bacillus subtilis [TaxId: 1423] (7)
1BM9A:; B:REPLICATION TERMINATOR PROTEIN FROM BACILLUS SUBTILIS
1F4KA:; B:CRYSTAL STRUCTURE OF THE REPLICATION TERMINATOR PROTEIN/B-SITE DNA COMPLEX
1J0RA:; B:CRYSTAL STRUCTURE OF THE REPLICATION TERMINATION PROTEIN MUTANT C110S
2DPDA:; B:CRYSTAL STRUCTURE OF THE REPLICATION TERMINATION PROTEIN IN COMPLEX WITH A PSEUDOSYMMETRIC B-SITE
2DPUA:CRYSTAL STRUCTURE OF THE REPLICATION TERMINATION PROTEIN IN COMPLEX WITH A PSEUDOSYMMETRIC 21MER B-SITE DNA
2DQRA:; B:; C:; D:CRYSTAL STRUCTURE OF THE REPLICATION TERMINATOR PROTEIN MUTANT RTP.E39K.R42Q
2EFWA:; B:; F:; G:CRYSTAL STRUCTURE OF THE RTP:NRB COMPLEX FROM BACILLUS SUBTILIS
(-)
Family: Restriction endonuclease FokI, N-terminal (recognition) domain (2)
(-)
Protein domain: Restriction endonuclease FokI, N-terminal (recognition) domain (2)
(-)
Flavobacterium okeanokoites [TaxId: 244] (2)
1FOKA:4-143; A:144-281; A:287-386STRUCTURE OF RESTRICTION ENDONUCLEASE FOKI BOUND TO DNA
2FOKA:5-143; A:144-286; A:287-386; B:5-143; B:144-286; B:287-378STRUCTURE OF RESTRICTION ENDONUCLEASE FOKI
(-)
Family: ReutB4095-like (1)
(-)
Protein domain: Putative DNA-binding protein ReutB4095 (1)
(-)
Ralstonia eutropha [TaxId: 106590] (1)
2OBPA:12-92; B:CRYSTAL STRUCTURE OF A PUTATIVE DNA-BINDING PROTEIN (REUT_B4095) FROM RALSTONIA EUTROPHA JMP134 AT 1.70 A RESOLUTION
(-)
Family: RHA1_ro06458-like (1)
(-)
Protein domain: Hypothetical protein RHA1_ro06458 (1)
(-)
Rhodococcus sp. RHA1 [TaxId: 101510] (1)
2NS0A:1-85CRYSTAL STRUCTURE OF PROTEIN RHA04536 FROM RHODOCOCCUS SP
(-)
Family: Rio2 serine protein kinase N-terminal domain (5)
(-)
Protein domain: Rio2 serine protein kinase N-terminal domain (5)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (5)
1TQIA:1-90CRYSTAL STRUCTURE OF A. FULGIDUS RIO2 SERINE PROTEIN KINASE
1TQMA:1-90CRYSTAL STRUCTURE OF A. FULGIDUS RIO2 SERINE PROTEIN KINASE BOUND TO AMPPNP
1TQPA:1-90CRYSTAL STRUCTURE OF A. FULGIDUS RIO2 SERINE PROTEIN KINASE BOUND TO ATP
1ZAOA:1-90CRYSTAL STRUCTURE OF A.FULGIDUS RIO2 KINASE COMPLEXED WITH ATP AND MANGANESE IONS
1ZARA:2-90CRYSTAL STRUCTURE OF A.FULGIDUS RIO2 KINASE COMPLEXED WITH ADP AND MANGANESE IONS
(-)
Family: ROK associated domain (4)
(-)
Protein domain: Mlc protein N-terminal domain (2)
(-)
Escherichia coli [TaxId: 562] (2)
1Z6RA:12-81; B:12-81; C:12-81; D:12-81CRYSTAL STRUCTURE OF MLC FROM ESCHERICHIA COLI
3BP8A:11-81; B:12-81CRYSTAL STRUCTURE OF MLC/EIIB COMPLEX
(-)
Protein domain: N-acetylglucosamine kinase (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
2HOEA:10-71CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINE KINASE (TM1224) FROM THERMOTOGA MARITIMA AT 2.46 A RESOLUTION
(-)
Protein domain: Transcriptional regulator VC2007 N-terminal domain (1)
(-)
Vibrio cholerae [TaxId: 666] (1)
1Z05A:10-80CRYSTAL STRUCTURE OF THE ROK FAMILY TRANSCRIPTIONAL REGULATOR, HOMOLOG OF E.COLI MLC PROTEIN.
(-)
Family: RPO3F domain-like (2)
(-)
Protein domain: DNA-directed RNA polymerase III subunit RPC6, RPO3F (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2DK5A:8-85SOLUTION STRUCTURE OF WINGED-HELIX DOMAIN IN RNA POLYMERASE III 39KDA POLYPEPTIDE
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
2DK8A:8-75SOLUTION STRUCTURE OF RPC34 SUBUNIT IN RNA POLYMERASE III FROM MOUSE
(-)
Family: Rps19E-like (1)
(-)
Protein domain: Ribosomal protein S19e (1)
(-)
Pyrococcus abyssi [TaxId: 29292] (1)
2V7FA:2-150STRUCTURE OF P. ABYSSI RPS19 PROTEIN
(-)
Family: Rv2827c N-terminal domain-like (1)
(-)
Protein domain: Hypothetical protein Rv2827c (1)
(-)
Mycobacterium tuberculosis [TaxId: 1773] (1)
1ZELA:1-82; B:-2-82CRYSTAL STRUCTURE OF RV2827C PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS
(-)
Family: SCF ubiquitin ligase complex WHB domain (6)
(-)
Protein domain: Anaphase promoting complex (APC) (4)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1LDDA:; B:; C:; D:STRUCTURE OF THE CUL1-RBX1-SKP1-F BOXSKP2 SCF UBIQUITIN LIGASE COMPLEX
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1LDJA:687-776STRUCTURE OF THE CUL1-RBX1-SKP1-F BOXSKP2 SCF UBIQUITIN LIGASE COMPLEX
1LDKB:687-776STRUCTURE OF THE CUL1-RBX1-SKP1-F BOXSKP2 SCF UBIQUITIN LIGASE COMPLEX
1U6GA:687-775CRYSTAL STRUCTURE OF THE CAND1-CUL1-ROC1 COMPLEX
(-)
Protein domain: Cullin-3 homologue (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1IUYA:SOLUTION STRUCTURE OF THE CULLIN-3 HOMOLOGUE
(-)
Protein domain: Cullin-4A (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2HYEC:676-759CRYSTAL STRUCTURE OF THE DDB1-CUL4A-RBX1-SV5V COMPLEX
(-)
Family: ScpB/YpuH-like (1)
(-)
Protein domain: Segregation and condensation protein B, ScpB (1)
(-)
Chlorobium tepidum [TaxId: 1097] (1)
1T6SA:1-85; A:86-162; B:1-85; B:86-162CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN FROM CHLOROBIUM TEPIDUM
(-)
Family: STY4665 C-terminal domain-like (1)
(-)
Protein domain: Hypothetical protein STY4665 (1)
(-)
Salmonella typhi [TaxId: 90370] (1)
2IPQX:396-528CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF SALMONELLA ENTERICA PROTEIN STY4665, PFAM DUF1528
(-)
Family: The central core domain of TFIIE beta (2)
(-)
Protein domain: The central core domain of TFIIE beta (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1D8JA:SOLUTION STRUCTURE OF THE CENTRAL CORE DOMAIN OF TFIIE BETA
1D8KA:SOLUTION STRUCTURE OF THE CENTRAL CORE DOMAIN OF TFIIE BETA
(-)
Family: TnsA endonuclease, C-terminal domain (2)
(-)
Protein domain: TnsA endonuclease, C-terminal domain (2)
(-)
Escherichia coli [TaxId: 562] (2)
1F1ZA:169-267; B:169-267TNSA, A CATALYTIC COMPONENT OF THE TN7 TRANSPOSITION SYSTEM
1T0FA:169-268; B:169-268CRYSTAL STRUCTURE OF THE TNSA/TNSC(504-555) COMPLEX
(-)
Family: Transcription factor E/IIe-alpha, N-terminal domain (1)
(-)
Protein domain: Transcription factor E/IIe-alpha, N-terminal domain (1)
(-)
Sulfolobus solfataricus [TaxId: 2287] (1)
1Q1HA:AN EXTENDED WINGED HELIX DOMAIN IN GENERAL TRANSCRIPTION FACTOR E/IIE ALPHA
(-)
Family: Transcription factor MotA, activation domain (2)
(-)
Protein domain: Transcription factor MotA, activation domain (2)
(-)
Bacteriophage T4 [TaxId: 10665] (2)
1BJAA:; B:ACTIVATION DOMAIN OF THE PHAGE T4 TRANSCRIPTION FACTOR MOTA
1I1SA:SOLUTION STRUCTURE OF THE TRANSCRIPTIONAL ACTIVATION DOMAIN OF THE BACTERIOPHAGE T4 PROTEIN MOTA
(-)
Family: Transcriptional regulator IclR, N-terminal domain (1)
(-)
Protein domain: Transcriptional regulator IclR, N-terminal domain (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
1MKMA:1-75; B:0-75CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA ICLR
(-)
Family: Transcriptional regulator Rrf2 (2)
(-)
Protein domain: Hypothetical protein BC1842 (1)
(-)
Bacillus cereus [TaxId: 1396] (1)
1YLFA:5-142X-RAY CRYSTAL STRUCTURE OF BC1842 PROTEIN FROM BACILLUS CEREUS, A MEMBER OF THE RRF2 FAMILY OF PUTATIVE TRANSCRIPTION REGULATORS.
(-)
Protein domain: Hypothetical protein ywnA (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1XD7A:CRSYTAL STRUCTURE OF A PUTATIVE DNA BINDING PROTEIN
(-)
Family: Transcriptional repressor Rex, N-terminal domain (2)
(-)
Protein domain: Transcriptional repressor Rex, N-terminal domain (2)
(-)
Thermus aquaticus [TaxId: 271] (2)
1XCBA:4-77; B:4-77; C:4-77; D:4-77; E:4-77; F:4-77; G:4-77X-RAY STRUCTURE OF A REX-FAMILY REPRESSOR/NADH COMPLEX FROM THERMUS AQUATICUS
2DT5A:4-77; B:4-77CRYSTAL STRUCTURE OF TTHA1657 (AT-RICH DNA-BINDING PROTEIN) FROM THERMUS THERMOPHILUS HB8
(-)
Family: TrmB-like (2)
(-)
Protein domain: Hypothetical protein AF2008 (1)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (1)
1SFXA:; B:X-RAY CRYSTAL STRUCTURE OF PUTATIVE HTH TRANSCRIPTION REGULATOR FROM ARCHAEOGLOBUS FULGIDUS
(-)
Protein domain: Hypothetical transcriptional regulator ST1889 (1)
(-)
Sulfolobus tokodaii [TaxId: 111955] (1)
2D1HA:1-109; B:CRYSTAL STRUCTURE OF ST1889 PROTEIN FROM THERMOACIDOPHILIC ARCHAEON SULFOLOBUS TOKODAII
(-)
Family: Vacuolar sorting protein domain (7)
(-)
Protein domain: Vacuolar protein sorting-associated protein VPS25 (3)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (3)
1U5TC:2-125; D:2-125; D:126-199; C:126-199STRUCTURE OF THE ESCRT-II ENDOSOMAL TRAFFICKING COMPLEX
1W7PB:1-125; B:126-199; C:1-125; C:126-199THE CRYSTAL STRUCTURE OF ENDOSOMAL COMPLEX ESCRT-II (VPS22/VPS25/VPS36)
1XB4A:1-125; A:126-201; B:1-125; B:126-202; C:3-125; C:126-201; D:2-125; D:126-201CRYSTAL STRUCTURE OF SUBUNIT VPS25 OF THE ENDOSOMAL TRAFFICKING COMPLEX ESCRT-II
(-)
Protein domain: Vacuolar protein sorting-associated protein VPS36 (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1U5TB:396-489; B:490-564STRUCTURE OF THE ESCRT-II ENDOSOMAL TRAFFICKING COMPLEX
1W7PD:396-489; D:490-566THE CRYSTAL STRUCTURE OF ENDOSOMAL COMPLEX ESCRT-II (VPS22/VPS25/VPS36)
(-)
Protein domain: Vacuolar sorting protein SNF8 (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1U5TA:20-164; A:165-232STRUCTURE OF THE ESCRT-II ENDOSOMAL TRAFFICKING COMPLEX
1W7PA:20-164; A:165-232THE CRYSTAL STRUCTURE OF ENDOSOMAL COMPLEX ESCRT-II (VPS22/VPS25/VPS36)
(-)
Family: YjcQ-like (1)
(-)
Protein domain: Uncharacterized protein YjcQ (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
2HGCA:5-82SOLUTION NMR STRUCTURE OF THE YJCQ PROTEIN FROM BACILLUS SUBTILIS. NORTHEAST STRUCTURAL GENOMICS TARGET SR346.
(-)
Family: Z-DNA binding domain (15)
(-)
Protein domain: 34L (1)
(-)
Yaba-like disease virus, YLDV [TaxId: 132475] (1)
1SFUA:; B:CRYSTAL STRUCTURE OF THE VIRAL ZALPHA DOMAIN BOUND TO LEFT-HANDED Z-DNA
(-)
Protein domain: automated matches (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
2L54A:SOLUTION STRUCTURE OF THE ZALPHA DOMAIN MUTANT OF ADAR1 (N43A,Y47A)
3IRQA:; B:; C:; D:CRYSTAL STRUCTURE OF A Z-Z JUNCTION
3IRRA:; B:; C:; D:CRYSTAL STRUCTURE OF A Z-Z JUNCTION (WITH HEPES INTERCALATING)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
2HEOA:; D:GENERAL STRUCTURE-BASED APPROACH TO THE DESIGN OF PROTEIN LIGANDS: APPLICATION TO THE DESIGN OF KV1.2 POTASSIUM CHANNEL BLOCKERS.
(-)
Protein domain: Dlm-1 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1J75A:CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN ZALPHA OF DLM-1 BOUND TO Z-DNA
(-)
Protein domain: dsRNA-binding protein E3 (E3L) (1)
(-)
Vaccinia virus [TaxId: 10245] (1)
1OYIA:SOLUTION STRUCTURE OF THE Z-DNA BINDING DOMAIN OF THE VACCINIA VIRUS GENE E3L
(-)
Protein domain: Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 (8)
(-)
Human (Homo sapiens) [TaxId: 9606] (8)
1QBJA:; B:; C:CRYSTAL STRUCTURE OF THE ZALPHA Z-DNA COMPLEX
1QGPA:NMR STRUCTURE OF THE Z-ALPHA DOMAIN OF ADAR1, 15 STRUCTURES
1XMKA:294-366THE CRYSTAL STRUCTURE OF THE ZB DOMAIN FROM THE RNA EDITING ENZYME ADAR1
2ACJA:140-199; B:140-199; C:140-199; D:140-199CRYSTAL STRUCTURE OF THE B/Z JUNCTION CONTAINING DNA BOUND TO Z-DNA BINDING PROTEINS
2GXBA:; B:CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA
3F21A:; B:; C:CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CACGTG)
3F22A:; B:; C:CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CGTACG)
3F23A:; B:; C:CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CGGCCG)
(-)
Fold: Domain of early E2A DNA-binding protein, ADDBP (4)
(-)
Superfamily: Domain of early E2A DNA-binding protein, ADDBP (4)
(-)
Family: Domain of early E2A DNA-binding protein, ADDBP (4)
(-)
Protein domain: Domain of early E2A DNA-binding protein, ADDBP (4)
(-)
Human adenovirus type 5 [TaxId: 28285] (4)
1ADUA:180-265; B:180-265EARLY E2A DNA-BINDING PROTEIN
1ADVA:180-265; B:180-265EARLY E2A DNA-BINDING PROTEIN
1ANVA:179-265ADENOVIRUS 5 DBP/URANYL FLUORIDE SOAK
2WB0X:177-2652.1 RESOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF THE HUMAN ADENOVIRUS 5 SSDNA BINDING PROTEIN
(-)
Fold: HLH-like (13)
(-)
Superfamily: HLH, helix-loop-helix DNA-binding domain (12)
(-)
Family: HLH, helix-loop-helix DNA-binding domain (12)
(-)
Protein domain: Mad protein (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1NLWA:; D:CRYSTAL STRUCTURE OF MAD-MAX RECOGNIZING DNA
(-)
Protein domain: Max protein (5)
(-)
Human (Homo sapiens) [TaxId: 9606] (4)
1HLOA:; B:THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROL
1NKPB:; E:CRYSTAL STRUCTURE OF MYC-MAX RECOGNIZING DNA
1NLWB:; E:CRYSTAL STRUCTURE OF MAD-MAX RECOGNIZING DNA
1R05A:; B:SOLUTION STRUCTURE OF MAX B-HLH-LZ
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1AN2A:RECOGNITION BY MAX OF ITS COGNATE DNA THROUGH A DIMERIC B/HLH/Z DOMAIN
(-)
Protein domain: Myc proto-oncogene protein (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1NKPA:; D:CRYSTAL STRUCTURE OF MYC-MAX RECOGNIZING DNA
(-)
Protein domain: Myod B/HLH domain (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1MDYA:; B:; C:; D:CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION
(-)
Protein domain: Pho4 B/HLH domain (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1A0AA:; B:PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4/DNA COMPLEX
(-)
Protein domain: SREBP-1a (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1AM9A:; B:; C:; D:HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
(-)
Protein domain: SREBP-2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1UKLC:; D:; E:; F:CRYSTAL STRUCTURE OF IMPORTIN-BETA AND SREBP-2 COMPLEX
(-)
Protein domain: Usf B/HLH domain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1AN4A:; B:STRUCTURE AND FUNCTION OF THE B/HLH/Z DOMAIN OF USF
(-)
Fold: IHF-like DNA-binding proteins (28)
(-)
Superfamily: IHF-like DNA-binding proteins (28)
(-)
Family: automated matches (4)
(-)
Protein domain: automated matches (4)
(-)
Escherichia coli [TaxId: 562] (1)
3OMYA:; B:CRYSTAL STRUCTURE OF THE PED208 TRAM N-TERMINAL DOMAIN
(-)
Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139] (1)
2NP2A:; B:HBB-DNA COMPLEX
(-)
Mycobacterium tuberculosis [TaxId: 1773] (2)
3C4I  [entry was replaced by entry 4PT4 without any SCOP domain information]
4DKYA:; B:CRYSTAL STRUCTURE ANALYSIS OF N TERMINAL REGION CONTAINING THE DIMERIZATION DOMAIN AND DNA BINDING DOMAIN OF HU PROTEIN(HISTONE LIKE PROTEIN-DNA BINDING) FROM MYCOBACTERIUM TUBERCULOSIS [H37RV]
(-)
Family: DNA-binding domain (fragment?) of the TraM protein (1)
(-)
Protein domain: DNA-binding domain (fragment?) of the TraM protein (1)
(-)
Escherichia coli [TaxId: 562] (1)
1DP3A:SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF THE TRAM PROTEIN
(-)
Family: Prokaryotic DNA-bending protein (23)
(-)
Protein domain: automated matches (2)
(-)
Bacillus anthracis [TaxId: 260799] (1)
3RHIA:; B:; C:; D:DNA-BINDING PROTEIN HU FROM BACILLUS ANTHRACIS
(-)
Escherichia coli [TaxId: 562] (1)
2HT0A:IHF BOUND TO DOUBLY NICKED DNA
(-)
Protein domain: HU protein (10)
(-)
Anabaena sp. [TaxId: 1167] (3)
1P51A:; B:; C:; D:ANABAENA HU-DNA COCRYSTAL STRUCTURE (AHU6)
1P71A:; B:ANABAENA HU-DNA CORCRYSTAL STRUCTURE (TR3)
1P78A:; B:ANABAENA HU-DNA COCRYSTAL STRUCTURE (AHU2)
(-)
Bacillus stearothermophilus [TaxId: 1422] (2)
1HUEA:; B:HISTONE-LIKE PROTEIN
1HUUA:; B:; C:DNA-BINDING PROTEIN HU FROM BACILLUS STEAROTHERMOPHILUS
(-)
Escherichia coli [TaxId: 562] (2)
1MULA:CRYSTAL STRUCTURE OF THE E. COLI HU ALPHA2 PROTEIN
2O97A:CRYSTAL STRUCTURE OF E. COLI HU HETERODIMER
(-)
Escherichia coli, beta-isoform [TaxId: 562] (1)
2O97B:1-90CRYSTAL STRUCTURE OF E. COLI HU HETERODIMER
(-)
Thermotoga maritima [TaxId: 2336] (2)
1B8ZA:; B:HU FROM THERMOTOGA MARITIMA
1RIYA:HU MUTANT V42I FROM THERMOTOGA MARITIMA
(-)
Protein domain: Integration host factor alpha subunit (IHFA) (4)
(-)
Escherichia coli [TaxId: 562] (4)
1IHFA:INTEGRATION HOST FACTOR/DNA COMPLEX
1OUZA:CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH A VARIANT H' SITE (T44A)
1OWFA:CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH THE NATIVE H' SITE
1OWGA:CRYSTAL STRUCTURE OF WT IHF COMPLEXED WITH AN ALTERED H' SITE (T44A)
(-)
Protein domain: Integration host factor beta subunit (IHFB) (5)
(-)
Escherichia coli [TaxId: 562] (5)
1IHFB:INTEGRATION HOST FACTOR/DNA COMPLEX
1OUZB:CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH A VARIANT H' SITE (T44A)
1OWFB:CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH THE NATIVE H' SITE
1OWGB:CRYSTAL STRUCTURE OF WT IHF COMPLEXED WITH AN ALTERED H' SITE (T44A)
2HT0B:IHF BOUND TO DOUBLY NICKED DNA
(-)
Protein domain: Transcription factor 1, TF1 (2)
(-)
Bacteriophage SPO1 [TaxId: 10685] (2)
1EXEA:; B:SOLUTION STRUCTURE OF A MUTANT OF TRANSCRIPTION FACTOR 1.
1WTUA:; B:TRANSCRIPTION FACTOR 1, NMR, MINIMIZED AVERAGE STRUCTURE
(-)
Fold: lambda repressor-like DNA-binding domains (180)
(-)
Superfamily: lambda repressor-like DNA-binding domains (180)
(-)
Family: automated matches (23)
(-)
Protein domain: automated matches (23)
(-)
Enterobacter sp. [TaxId: 211595] (13)
3CLCA:; B:; C:; D:CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I TETRAMER IN COMPLEX WITH ITS NATURAL 35 BASE-PAIR OPERATOR
3FYAA:; B:CRYSTAL STRUCTURE OF AN R35A MUTANT OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I
3G5GA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:CRYSTAL STRUCTURE OF THE WILD-TYPE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I
3S8QA:; B:CRYSTAL STRUCTURE OF THE R-M CONTROLLER PROTEIN C.ESP1396I OL OPERATOR COMPLEX
4F8DA:; B:CRYSTAL STRUCTURE OF AN R46A MUTANT OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I (MONOCLINIC FORM)
4FBIA:; B:; C:; D:CRYSTAL STRUCTURE OF AN R46A MUTANT OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I (TRIGONAL FORM)
4FN3A:; B:CRYSTAL STRUCTURE OF AN S52A MUTANT OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I
4I6RA:; B:HIGH RESOLUTION CRYSTAL STRUCTURE OF THE WILD-TYPE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I (TRICLINIC FORM)
4I6TA:; B:CRYSTAL STRUCTURE OF A T36A MUTANT OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I
4I6UA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF A Y37F MUTANT OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I
4IA8A:; B:CRYSTAL STRUCTURE OF A Y37A MUTANT OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I
4IVZA:; B:; E:; F:A Y37F MUTANT OF C.ESP1396I BOUND TO ITS HIGHEST AFFINITY OPERATOR SITE OM
4IWRA:; B:; E:; F:C.ESP1396I BOUND TO A 25 BASE PAIR OPERATOR SITE
(-)
Enterococcus faecalis [TaxId: 1351] (5)
2AW6B:1-66STRUCTURE OF A BACTERIAL PEPTIDE PHEROMONE/RECEPTOR COMPLEX AND ITS MECHANISM OF GENE REGULATION
2AXVA:2-66; B:2-66; C:2-66; D:2-66STRUCTURE OF PRGX Y153C MUTANT
2AXZA:1-66; B:1-66; C:2-66; D:1-66CRYSTAL STRUCTURE OF PRGX/CCF10 COMPLEX
2GRLA:1-66; B:1-66; C:1-66; D:1-66CRYSTAL STRUCTURE OF DCT/ICF10 COMPLEX
2GRMB:1-66; C:1-66CRYSTAL STRUCTURE OF PRGX/ICF10 COMPLEX
(-)
Escherichia coli [TaxId: 362663] (1)
2L8NA:NMR STRUCTURE OF THE CYTIDINE REPRESSOR DNA BINDING DOMAIN IN PRESENCE OF OPERATOR HALF-SITE DNA
(-)
Escherichia coli [TaxId: 562] (1)
2EBYB:CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN FROM E. COLI
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
2XSDC:247-319CRYSTAL STRUCTURE OF THE DIMERIC OCT-6 (POU3F1) POU DOMAIN BOUND TO PALINDROMIC MORE DNA
(-)
Neisseria meningitidis [TaxId: 122586] (1)
3VK0A:; B:; C:CRYSTAL STRUCTURE OF HYPOTHETICAL TRANSCRIPTION FACTOR NHTF FROM NEISSERIA
(-)
Pseudomonas fluorescens [TaxId: 220664] (1)
2PIJA:; B:STRUCTURE OF THE CRO PROTEIN FROM PROPHAGE PFL 6 IN PSEUDOMONAS FLUORESCENS PF-5
(-)
Family: Bacteriophage CII protein (3)
(-)
Protein domain: Regulatory protein cII (3)
(-)
Bacteriophage lambda [TaxId: 10710] (3)
1XWRA:2-80; B:; C:; D:CRYSTAL STRUCTURE OF THE COLIPHAGE LAMBDA TRANSCRIPTION ACTIVATOR PROTEIN CII
1ZPQA:; C:; D:; B:STRUCTURE OF BACTERIOPHAGE LAMBDA CII PROTEIN
1ZS4A:4-81; B:; C:; D:STRUCTURE OF BACTERIOPHAGE LAMBDA CII PROTEIN IN COMPLEX WITH DNA
(-)
Family: CUT domain (10)
(-)
Protein domain: automated matches (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
2O49A:CRYSTAL STRUCTURE OF THE N-TERMINAL CUT DOMAIN OF SATB1 BOUND TO MATRIX ATTACHMENT REGION DNA
2O4AA:CRYSTAL STRUCTURE OF THE N-TERMINAL CUT DOMAIN OF SATB1 BOUND TO MATRIX ATTACHMENT REGION DNA
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
2D5VA:1-79; B:1-79CRYSTAL STRUCTURE OF HNF-6ALPHA DNA-BINDING DOMAIN IN COMPLEX WITH THE TTR PROMOTER
(-)
Protein domain: DNA-binding protein SATB1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1YSEA:368-455SOLUTION STRUCTURE OF THE MAR-BINDING DOMAIN OF SATB1
(-)
Protein domain: DNA-binding protein SATB2 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1WIZA:SOLUTION STRUCTURE OF THE FIRST CUT DOMAIN OF KIAA1034 PROTEIN
2CSFA:8-95SOLUTION STRUCTURE OF THE SECOND CUT DOMAIN OF HUMAN SATB2
(-)
Protein domain: Hepatocyte nuclear factor 6 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1S7EA:6-85SOLUTION STRUCTURE OF HNF-6
(-)
Protein domain: Homeobox protein Cux-2, CUTL2 (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1WH6A:SOLUTION STRUCTURE OF THE SECOND CUT DOMAIN OF HUMAN HOMEOBOX PROTEIN CUX-2
1WH8A:SOLUTION STRUCTURE OF THE THIRD CUT DOMAIN OF HUMAN HOMEOBOX PROTEIN CUX-2
1X2LA:9-95SOLUTION STRUCTURE OF THE CUT DOMAIN OF HUMAN HOMEOBOX PROTEIN CUX-2 (CUT-LIKE 2)
(-)
Family: Cyanase N-terminal domain (8)
(-)
Protein domain: automated matches (6)
(-)
Escherichia coli [TaxId: 562] (6)
2IU7A:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86SITE DIRECTED MUTAGENESIS OF KEY RESIDUES INVOLVED IN THE CATALYTIC MECHANISM OF CYANASE
2IUOA:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86SITE DIRECTED MUTAGENESIS OF KEY RESIDUES INVOLVED IN THE CATALYTIC MECHANISM OF CYANASE
2IV1A:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86SITE DIRECTED MUTAGENESIS OF KEY RESIDUES INVOLVED IN THE CATALYTIC MECHANISM OF CYANASE
2IVBA:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86SITE DIRECTED MUTAGENESIS OF KEY RESIDUES INVOLVED IN THE CATALYTIC MECHANISM OF CYANASE
2IVGA:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86SITE DIRECTED MUTAGENESIS OF KEY RESIDUES INVOLVED IN THE CATALYTIC MECHANISM OF CYANASE
2IVQA:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86SITE DIRECTED MUTAGENESIS OF KEY RESIDUES INVOLVED IN THE CATALYTIC MECHANISM OF CYANASE
(-)
Protein domain: Cyanase N-terminal domain (2)
(-)
Escherichia coli [TaxId: 562] (2)
1DW9A:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86STRUCTURE OF CYANASE REVEALS THAT A NOVEL DIMERIC AND DECAMERIC ARRANGEMENT OF SUBUNITS IS REQUIRED FOR FORMATION OF THE ENZYME ACTIVE SITE
1DWKA:1-86; B:1-86; C:1-86; D:1-86; E:1-86; F:1-86; G:1-86; H:1-86; I:1-86; J:1-86STRUCTURE OF CYANASE WITH THE DI-ANION OXALATE BOUND AT THE ENZYME ACTIVE SITE
(-)
Family: EDF1-like (1)
(-)
Protein domain: Endothelial differentiation-related factor 1, EDF1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1X57A:8-85SOLUTION STRUCTURES OF THE HTH DOMAIN OF HUMAN EDF-1 PROTEIN
(-)
Family: GalR/LacI-like bacterial regulator (44)
(-)
Protein domain: Fructose repressor (FruR), N-terminal domain (2)
(-)
Escherichia coli [TaxId: 562] (2)
1UXCA:FRUCTOSE REPRESSOR DNA-BINDING DOMAIN, NMR, MINIMIZED STRUCTURE
1UXDA:FRUCTOSE REPRESSOR DNA-BINDING DOMAIN, NMR, 34 STRUCTURES
(-)
Protein domain: Glucose-resistance amylase regulator CcpA, N-terminal domain (4)
(-)
Bacillus megaterium [TaxId: 1404] (4)
1RZRA:1-60; C:1-60; D:1-60; G:1-60CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR-PHOSPHOPROTEIN-DNA COMPLEX
1ZVVA:1-59; B:1-59; G:1-59CRYSTAL STRUCTURE OF A CCPA-CRH-DNA COMPLEX
2HSGA:2-60STRUCTURE OF TRANSCRIPTION REGULATOR CCPA IN ITS DNA-FREE STATE
2JCGA:3-51APO FORM OF THE CATABOLITE CONTROL PROTEIN A (CCPA) FROM BACILLUS MEGATERIUM, WITH THE DNA BINDING DOMAIN
(-)
Protein domain: Lac repressor (LacR), N-terminal domain (14)
(-)
Escherichia coli [TaxId: 562] (14)
1CJGA:; B:NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX
1EFAA:2-60; B:2-60; C:46-60CRYSTAL STRUCTURE OF THE LAC REPRESSOR DIMER BOUND TO OPERATOR AND THE ANTI-INDUCER ONPF
1JWLA:2-60; B:2-60STRUCTURE OF THE DIMERIC LAC REPRESSOR/OPERATOR O1/ONPF COMPLEX
1L1MA:; B:SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
1LBGA:1-60; B:1-60; C:1-60; D:1-60LACTOSE OPERON REPRESSOR BOUND TO 21-BASE PAIR SYMMETRIC OPERATOR DNA, ALPHA CARBONS ONLY
1LCCA:STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
1LCDA:STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
1LQCA:LAC REPRESSOR HEADPIECE (RESIDUES 1-56), NMR, 32 STRUCTURES
1OSLA:; B:SOLUTION STRUCTURE OF A DIMERIC LACTOSE DNA-BINDING DOMAIN COMPLEXED TO A NONSPECIFIC DNA SEQUENCE
2BJCA:1-62; B:NMR STRUCTURE OF A PROTEIN-DNA COMPLEX OF AN ALTERED SPECIFICITY MUTANT OF THE LAC REPRESSOR HEADPIECE THAT MIMICS THE GAL REPRESSOR
2KEIA:; B:REFINED SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
2KEJA:; B:SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O2
2KEKA:; B:SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O3
2PE5A:2-61; B:2-61; C:2-61CRYSTAL STRUCTURE OF THE LAC REPRESSOR BOUND TO ONPG IN REPRESSED STATE
(-)
Protein domain: Purine repressor (PurR), N-terminal domain (24)
(-)
Escherichia coli [TaxId: 562] (24)
1BDHA:3-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1BDIA:3-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1JFSA:2-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX
1JFTA:2-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX
1JH9A:2-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX
1PNRA:3-58PURINE REPRESSOR-HYPOXANTHINE-PURF-OPERATOR COMPLEX
1PRUA:PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING
1PRVA:PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING
1QP0A:3-58PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1QP4A:3-58PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1QP7A:3-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1QPZA:2-58PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1QQAA:3-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1QQBA:3-58PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
1VPWA:3-58STRUCTURE OF THE PURR MUTANT, L54M, BOUND TO HYPOXANTHINE AND PURF OPERATOR DNA
1WETA:3-58STRUCTURE OF THE PURR-GUANINE-PURF OPERATOR COMPLEX
1ZAYA:3-58PURINE REPRESSOR-HYPOXANTHINE-MODIFIED-PURF-OPERATOR COMPLEX
2PUAA:2-58CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
2PUBA:3-58CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
2PUCA:3-58CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
2PUDA:3-58CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
2PUEA:3-58CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
2PUFA:3-58CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
2PUGA:3-58CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
(-)
Family: NE0471 C-terminal domain-like (1)
(-)
Protein domain: Hypothetical protein NE0471 C-terminal domain (1)
(-)
Nitrosomonas europaea [TaxId: 915] (1)
2AUWA:88-154; B:88-155CRYSTAL STRUCTURE OF PUTATIVE DNA BINDING PROTEIN NE0471 FROM NITROSOMONAS EUROPAEA ATCC 19718
(-)
Family: NE1354 (2)
(-)
Protein domain: HTH-motif protein NE1354 (1)
(-)
Nitrosomonas europaea [TaxId: 915] (1)
2A6CA:1-69; B:CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR (NE_1354) FROM NITROSOMONAS EUROPAEA AT 1.90 A RESOLUTION
(-)
Protein domain: Hypothetical protein RPA3824 (1)
(-)
Rhodopseudomonas palustris [TaxId: 1076] (1)
2O38A:28-116; B:PUTATIVE XRE FAMILY TRANSCRIPTIONAL REGULATOR
(-)
Family: Phage repressors (36)
(-)
Protein domain: 434 C1 repressor, DNA-binding domain (8)
(-)
Bacteriophage 434 [TaxId: 10712] (8)
1PERL:; R:THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES
1PRAA:DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN (RESIDUES 1 TO 69) OF THE 434 REPRESSOR AND COMPARISON WITH THE X-RAY CRYSTAL STRUCTURE
1R63A:STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES
1R69A:STRUCTURE OF THE AMINO-TERMINAL DOMAIN OF PHAGE 434 REPRESSOR AT 2.0 ANGSTROMS RESOLUTION
1RPEL:; R:THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
1SQ8A:A VARIANT 434 REPRESSOR DNA BINDING DOMAIN DEVOID OF HYDROXYL GROUPS, NMR, 20 STRUCTURES
2OR1L:; R:RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION
2R63A:STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES
(-)
Protein domain: cro 434 (3)
(-)
Bacteriophage 434 [TaxId: 10712] (3)
1ZUGA:STRUCTURE OF PHAGE 434 CRO PROTEIN, NMR, 20 STRUCTURES
2CROA:STRUCTURE OF PHAGE 434 CRO PROTEIN AT 2.35 ANGSTROMS RESOLUTION
3CROL:; R:THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
(-)
Protein domain: cro lambda repressor (12)
(-)
Bacteriophage lambda [TaxId: 10710] (12)
1COPD:; E:THREE-DIMENSIONAL DIMER STRUCTURE OF THE LAMBDA-CRO REPRESSOR IN SOLUTION AS DETERMINED BY HETERONUCLEAR MULTIDIMENSIONAL NMR
1D1LA:CRYSTAL STRUCTURE OF CRO-F58W MUTANT
1D1MA:; B:CRYSTAL STRUCTURE OF CRO K56-[DGEVK]-F58W MUTANT
1ORCA:CRO REPRESSOR INSERTION MUTANT K56-[DGEVK]
2A63A:SOLUTION STRUCTURE OF A STABLY MONOMERIC MUTANT OF LAMBDA CRO PRODUCED BY SUBSTITUTIONS IN THE BALL-AND-SOCKET INTERFACE
2ECSA:; B:LAMBDA CRO MUTANT Q27P/A29S/K32Q AT 1.4 A IN SPACE GROUP C2
2ORCA:CRO REPRESSOR INSERTION MUTANT K56-[DGEVK], NMR, 32 STRUCTURES
2OVGA:LAMBDA CRO Q27P/A29S/K32Q TRIPLE MUTANT AT 1.35 A IN SPACE GROUP P3221
3ORCA:CRYSTAL STRUCTURE OF AN ENGINEERED CRO MONOMER BOUND NONSPECIFICALLY TO DNA
4CROA:; B:; C:; D:; E:; F:PROTEIN-DNA CONFORMATIONAL CHANGES IN THE CRYSTAL STRUCTURE OF A LAMBDA CRO-OPERATOR COMPLEX
5CROA:; B:; C:; O:REFINED STRUCTURE OF CRO REPRESSOR PROTEIN FROM BACTERIOPHAGE LAMBDA
6CROA:CRYSTAL STRUCTURE OF LAMBDA-CRO BOUND TO A CONSENSUS OPERATOR AT 3.0 ANGSTROM RESOLUTION
(-)
Protein domain: cro p22 (1)
(-)
Bacteriophage p22 [TaxId: 10754] (1)
1RZSA:SOLUTION STRUCTURE OF P22 CRO
(-)
Protein domain: lambda C1 repressor, DNA-binding domain (5)
(-)
Bacteriophage lambda [TaxId: 10710] (5)
1LLIA:; B:THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING
1LMB3:; 4:REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX
1LRPA:; C:; B:COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS FROM BACTERIOPHAGE LAMBDA
1RIOA:; B:STRUCTURE OF BACTERIOPHAGE LAMBDA CI-NTD IN COMPLEX WITH SIGMA-REGION4 OF THERMUS AQUATICUS BOUND TO DNA
3KZ3A:; B:A STRUCTURE OF A LAMBDA REPRESSOR FRAGMENT MUTANT
(-)
Protein domain: Ner (2)
(-)
Bacteriophage Mu [TaxId: 10677] (2)
1NEQA:SOLUTION STRUCTURE OF THE MU NER PROTEIN BY MULTIDIMENSIONAL NMR
1NERA:SOLUTION STRUCTURE OF THE MU NER PROTEIN BY MULTIDIMENSIONAL NMR
(-)
Protein domain: P22 C2 repressor, DNA-binding domain (5)
(-)
Salmonella bacteriophage P22 [TaxId: 10754] (5)
1ADRA:DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE STRUCTURE OF THE DNA-BINDING DOMAIN OF THE P22 C2 REPRESSOR (1-76) IN SOLUTION AND COMPARISON WITH THE DNA-BINDING DOMAIN OF THE 434 REPRESSOR
2R1JL:; R:CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH THE SYNTHETIC OPERATOR 9T
3JXBC:; D:CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C
3JXCL:; R:CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9T IN THE PRESENCE OF TL+
3JXDL:; R:CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C IN THE PRESENCE OF RB+
(-)
Family: POU-specific domain (9)
(-)
Protein domain: Hepatocyte nuclear factor 1a (LFB1/HNF1) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1IC8A:87-180; B:85-179HEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE PRODUCT
(-)
Protein domain: Oct-1 (7)
(-)
Human (Homo sapiens) [TaxId: 9606] (7)
1CQTA:2-75; B:505-575CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT
1E3OC:1-75CRYSTAL STRUCTURE OF OCT-1 POU DIMER BOUND TO MORE
1GT0C:3-77CRYSTAL STRUCTURE OF A POU/HMG/DNA TERNARY COMPLEX
1HF0A:6-75; B:6-75CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF OCT-1 BOUND TO DNA AS A DIMER
1O4XA:5-79TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT
1OCTC:5-75CRYSTAL STRUCTURE OF THE OCT-1 POU DOMAIN BOUND TO AN OCTAMER SITE: DNA RECOGNITION WITH TETHERED DNA-BINDING MODULES
1POUA:THE SOLUTION STRUCTURE OF THE OCT-1 POU-SPECIFIC DOMAIN REVEALS A STRIKING SIMILARITY TO THE BACTERIOPHAGE LAMBDA REPRESSOR DNA-BINDING DOMAIN
(-)
Protein domain: Pit-1 (1)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1AU7A:5-76; B:5-74PIT-1 MUTANT/DNA COMPLEX
(-)
Family: PrgX N-terminal domain-like (4)
(-)
Protein domain: PrgX (4)
(-)
Enterococcus faecalis [TaxId: 1351] (4)
2AW6A:1-69STRUCTURE OF A BACTERIAL PEPTIDE PHEROMONE/RECEPTOR COMPLEX AND ITS MECHANISM OF GENE REGULATION
2AWIA:2-66; B:2-66; K:4-66; L:4-66; C:3-66; D:3-66; E:3-66; F:3-66; G:4-66; H:4-66; I:2-66; J:4-66STRUCTURE OF PRGX Y153C MUTANT
2AXUA:1-68; B:2-68; C:3-68; D:3-68; E:3-68; F:3-68; G:2-68; H:3-68; I:2-68; J:4-68; K:4-68; L:2-68STRUCTURE OF PRGX
2GRMA:1-69CRYSTAL STRUCTURE OF PRGX/ICF10 COMPLEX
(-)
Family: Probable transcriptional regulator VC1968, N-terminal domain (1)
(-)
Protein domain: Probable transcriptional regulator VC1968, N-terminal domain (1)
(-)
Vibrio cholerae [TaxId: 666] (1)
1Y9QA:4-82CRYSTAL STRUCTURE OF HTH_3 FAMILY TRANSCRIPTIONAL REGULATOR FROM VIBRIO CHOLERAE
(-)
Family: SinR domain-like (36)
(-)
Protein domain: Antitoxin HigA (4)
(-)
Escherichia coli [TaxId: 562] (2)
2ICPA:8-94CRYSTAL STRUCTURE OF THE BACTERIAL ANTITOXIN HIGA FROM ESCHERICHIA COLI AT PH 4.0. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER390.
2ICTA:CRYSTAL STRUCTURE OF THE BACTERIAL ANTITOXIN HIGA FROM ESCHERICHIA COLI AT PH 8.5. NORTHEAST STRUCTURAL GENOMICS TARGET ER390.
(-)
Proteus vulgaris [TaxId: 585] (2)
4MCTA:; C:P. VULGARIS HIGBA STRUCTURE, CRYSTAL FORM 1
4MCXA:; C:; E:P. VULGARIS HIGBA STRUCTURE, CRYSTAL FORM 2
(-)
Protein domain: automated matches (3)
(-)
Aeromonas hydrophila [TaxId: 644] (1)
1Y7YB:HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.AHDI FROM AEROMONAS HYDROPHILA
(-)
Enterococcus faecalis [TaxId: 1351] (2)
2XIUA:; B:HIGH RESOLUTION STRUCTURE OF MTSL-TAGGED CYLR2.
2XJ3A:; B:HIGH RESOLUTION STRUCTURE OF THE T55C MUTANT OF CYLR2.
(-)
Protein domain: Hydroxypropylphosphonic acid epoxidase Fom4, N-terminal domain (14)
(-)
Streptomyces wedmorensis [TaxId: 43759] (14)
1ZZ6A:6-76; B:6-76CRYSTAL STRUCTURE OF APO-HPPE
1ZZ7A:7-76; B:7-76CRYSTAL STRUCTURE OF FEII HPPE IN COMPLEX WITH SUBSTRATE FORM 1
1ZZ8A:7-76; B:6-76; C:6-76CRYSTAL STRUCTURE OF FEII HPPE IN COMPLEX WITH SUBSTRATE FORM 2
1ZZ9A:6-76; B:6-76; C:6-76CRYSTAL STRUCTURE OF FEII HPPE
1ZZBA:6-76; B:6-76CRYSTAL STRUCTURE OF COII HPPE IN COMPLEX WITH SUBSTRATE
1ZZCA:5-76; B:6-76CRYSTAL STRUCTURE OF COII HPPE IN COMPLEX WITH TRIS BUFFER
2BNMA:5-76; B:5-76THE STRUCTURE OF HYDROXYPROPYLPHOSPHONIC ACID EPOXIDASE FROM S. WEDMORENIS.
2BNNA:5-76; B:5-76THE STRUCTURE OF HYDROXYPROPYLPHOSPHONIC ACID EPOXIDASE FROM S. WEDMORENIS IN COMPLEX WITH FOSFOMYCIN
2BNOA:4-76; B:5-76THE STRUCTURE OF HYDROXYPROPYLPHOSPHONIC ACID EPOXIDASE FROM S. WEDMORENIS.
3SCFA:6-76; B:6-76; C:6-76FE(II)-HPPE WITH S-HPP AND NO
3SCGA:6-76; B:6-76; C:6-76FE(II)-HPPE WITH R-HPP
3SCHA:5-76; B:6-76CO(II)-HPPE WITH R-HPP
4J1WA:5-76; B:5-76; C:5-76CRYSTAL STRUCTURE OF FE(II)-HPPE WITH ALTERNATIVE SUBSTRATE (R)-1-HPP
4J1XA:6-76; B:6-76; C:4-76CRYSTAL STRUCTURE OF FE(II)-HPPE WITH ALTERNATIVE SUBSTRATE (S)-1-HPP
(-)
Protein domain: Putative transcription regulator CylR2 (10)
(-)
Enterococcus faecalis [TaxId: 1351] (10)
1UTXA:; B:REGULATION OF CYTOLYSIN EXPRESSION BY ENTEROCOCCUS FAECALIS: ROLE OF CYLR2
2GZUA:; B:HIGH-RESOLUTION STRUCTURE DETERMINATION OF THE CYLR2 HOMODIMER USING INTERMONOMER DISTANCES FROM PARAMAGNETIC RELAXATION ENHANCEMENT AND NMR DIPOLAR COUPLINGS
2LYJA:; B:NOE-BASED 3D STRUCTURE OF THE CYLR2 HOMODIMER AT 298K
2LYKA:; B:NOE-BASED 3D STRUCTURE OF THE CYLR2 HOMODIMER AT 270K (-3 CELSIUS DEGREES)
2LYLA:; B:NOE-BASED 3D STRUCTURE OF THE PREDISSOCIATED HOMODIMER OF CYLR2 IN EQUILIBRIUM WITH MONOMER AT 266K (-7 CELSIUS DEGREES)
2LYPA:NOE-BASED 3D STRUCTURE OF THE MONOMER OF CYLR2 IN EQUILIBRIUM WITH PREDISSOCIATED HOMODIMER AT 266K (-7 CELSIUS DEGREES)
2LYQA:NOE-BASED 3D STRUCTURE OF THE MONOMERIC INTERMEDIATE OF CYLR2 AT 262K (-11 CELSIUS DEGREES)
2LYRA:NOE-BASED 3D STRUCTURE OF THE MONOMERIC PARTIALLY-FOLDED INTERMEDIATE OF CYLR2 AT 259K (-14 CELSIUS DEGREES)
2LYSA:NOE-BASED 3D STRUCTURE OF THE MONOMERIC PARTIALLY-FOLDED INTERMEDIATE OF CYLR2 AT 257K (-16 CELSIUS DEGREES)
2XI8A:; B:HIGH RESOLUTION STRUCTURE OF NATIVE CYLR2
(-)
Protein domain: Putative transcriptional regulator RHA1_ro04071 (1)
(-)
Rhodococcus sp. RHA1 [TaxId: 101510] (1)
2OFYA:3-84; B:CRYSTAL STRUCTURE OF PUTATIVE XRE-FAMILY TRANSCRIPTIONAL REGULATOR FROM RHODOCOCCUS SP.
(-)
Protein domain: Regulatory protein C.BclI (1)
(-)
Bacillus caldolyticus [TaxId: 1394] (1)
2B5AA:1-77; B:; C:; D:C.BCLI, CONTROL ELEMENT OF THE BCLI RESTRICTION-MODIFICATION SYSTEM
(-)
Protein domain: Restriction-modification controller protein C.AhdI (1)
(-)
Aeromonas hydrophila [TaxId: 644] (1)
1Y7YA:5-73HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.AHDI FROM AEROMONAS HYDROPHILA
(-)
Protein domain: SinR repressor, DNA-binding domain (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1B0NA:1-68SINR PROTEIN/SINI PROTEIN COMPLEX
(-)
Protein domain: Uncharacterized protein Atu1735 (1)
(-)
Agrobacterium tumefaciens [TaxId: 358] (1)
2PPXA:30-91CRYSTAL STRUCTURE OF A HTH XRE-FAMILY LIKE PROTEIN FROM AGROBACTERIUM TUMEFACIENS
(-)
Family: YdiL-like (2)
(-)
Protein domain: Hypothetical protein SO3848 (1)
(-)
Shewanella oneidensis [TaxId: 70863] (1)
2OX6A:5-166; B:; C:; D:CRYSTAL STRUCTURE OF GENE PRODUCT SO3848 FROM SHEWANELLA ONEIDENSIS MR-1
(-)
Protein domain: Putative cytoplasmic protein YdiL (1)
(-)
Salmonella typhimurium [TaxId: 90371] (1)
1S4KA:; B:PUTATIVE CYTOPLASMIC PROTEIN FROM SALMONELLA TYPHIMURIUM
(-)
Fold: LEM/SAP HeH motif (33)
(-)
Superfamily: DNA-binding domain of EIN3-like (1)
(-)
Family: DNA-binding domain of EIN3-like (1)
(-)
Protein domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1WIJA:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF ETHYLENE-INSENSITIVE3-LIKE3
(-)
Superfamily: SAP domain (9)
(-)
Family: SAP domain (9)
(-)
Protein domain: DNA binding C-terminal domain of ku70 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1JEQA:559-609CRYSTAL STRUCTURE OF THE KU HETERODIMER
1JJRA:THE THREE-DIMENSIONAL STRUCTURE OF THE C-TERMINAL DNA BINDING DOMAIN OF HUMAN KU70
(-)
Protein domain: S/mar DNA-binding protein Tho1 (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1H1JS:THE SAP DOMAIN IS A DNA-BINDING DOMAIN CAPABLE OF BINDING S/MAR DNA
(-)
Fold: Putative DNA-binding domain (45)
(-)
Superfamily: Putative DNA-binding domain (45)
(-)
Family: automated matches (2)
(-)
Protein domain: automated matches (2)
(-)
Escherichia coli K-12 [TaxId: 83333] (1)
2ZHGA:CRYSTAL STRUCTURE OF SOXR IN COMPLEX WITH DNA
(-)
Streptomyces lividans [TaxId: 1916] (1)
2VZ4A:THE N-TERMINAL DOMAIN OF MERR-LIKE PROTEIN TIPAL BOUND TO PROMOTER DNA
(-)
Family: Dachshund-homology domain (3)
(-)
Protein domain: automated matches (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
3EQ5A:; B:; K:; L:; C:; D:; E:; F:; G:; H:; I:; J:CRYSTAL STRUCTURE OF FRAGMENT 137 TO 238 OF THE HUMAN SKI-LIKE PROTEIN
(-)
Protein domain: Retinal determination protein Dachshund (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1L8RA:; B:STRUCTURE OF THE RETINAL DETERMINATION PROTEIN DACHSHUND REVEALS A DNA-BINDING MOTIF
(-)
Protein domain: Ski oncogene (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1SBXA:CRYSTAL STRUCTURE OF THE DACHSHUND-HOMOLOGY DOMAIN OF HUMAN SKI
(-)
Family: DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain (2)
(-)
Protein domain: DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1D4UA:37-111INTERACTIONS OF HUMAN NUCLEOTIDE EXCISION REPAIR PROTEIN XPA WITH RPA70 AND DNA: CHEMICAL SHIFT MAPPING AND 15N NMR RELAXATION STUDIES
1XPAA:134-210SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE
(-)
Family: DNA-binding N-terminal domain of transcription activators (16)
(-)
Protein domain: automated matches (4)
(-)
Bacillus subtilis [TaxId: 1423] (4)
3D6YA:2-120CRYSTAL STRUCTURE OF R275E MUTANT OF BMRR BOUND TO DNA AND BERBERINE
3D6ZA:2-120CRYSTAL STRUCTURE OF R275E MUTANT OF BMRR BOUND TO DNA AND RHODAMINE
3D71A:2-120CRYSTAL STRUCTURE OF E253Q BMRR BOUND TO 22 BASE PAIR PROMOTER SITE
3IAOA:1-120CONFORMATIONAL PLASTICITY OF THE COILED COIL DOMAIN OF BMRR IS REQUIRED FOR BMR PROMOTER BINDING-THE UNLIGANDED STRUCTURE OF BMRR
(-)
Protein domain: Multidrug transporter activator MtaN (2)
(-)
Bacillus subtilis [TaxId: 1423] (2)
1JBGA:CRYSTAL STRUCTURE OF MTAN, THE BACILLUS SUBTILIS MULTIDRUG TRANSPORTER ACTIVATOR, N-TERMINUS
1R8DA:; B:CRYSTAL STRUCTURE OF MTAN BOUND TO DNA
(-)
Protein domain: Transcription activator BmrR (4)
(-)
Bacillus subtilis [TaxId: 1423] (4)
1EXIA:3-120CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPSB
1EXJA:3-120CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP
1R8EA:3-120CRYSTAL STRUCTURE OF BMRR BOUND TO DNA AT 2.4A RESOLUTION
3D70A:3-120CRYSTAL STRUCTURE OF E253A MUTANT OF BMRR BOUND TO 22-BP OLIGONUCLEOTIDE
(-)
Protein domain: Transcriptional regulator CueR (3)
(-)
Escherichia coli [TaxId: 562] (3)
1Q05A:; B:CRYSTAL STRUCTURE OF THE CU(I) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR
1Q06A:; B:CRYSTAL STRUCTURE OF THE AG(I) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR
1Q07A:; B:CRYSTAL STRUCTURE OF THE AU(I) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR
(-)
Protein domain: Transcriptional regulator ZntR (3)
(-)
Escherichia coli [TaxId: 562] (3)
1Q08A:; B:CRYSTAL STRUCTURE OF THE ZN(II) FORM OF E. COLI ZNTR, A ZINC-SENSING TRANSCRIPTIONAL REGULATOR, AT 1.9 A RESOLUTION (SPACE GROUP P212121)
1Q09A:CRYSTAL STRUCTURE OF THE ZN(II) FORM OF E. COLI ZNTR, A ZINC-SENSING TRANSCRIPTIONAL REGULATOR (SPACE GROUP I4122)
1Q0AA:; B:CRYSTAL STRUCTURE OF THE ZN(II) FORM OF E. COLI ZNTR, A ZINC-SENSING TRANSCRIPTIONAL REGULATOR (SPACE GROUP C222)
(-)
Family: Domains B1 and B5 of PheRS-beta, PheT (11)
(-)
Protein domain: Domains B1 and B5 of PheRS-beta, PheT (11)
(-)
Thermus thermophilus [TaxId: 274] (11)
1B70B:1-38,B:152-190; B:400-474PHENYLALANYL TRNA SYNTHETASE COMPLEXED WITH PHENYLALANINE
1B7YB:1-38,B:152-190; B:400-474PHENYLALANYL TRNA SYNTHETASE COMPLEXED WITH PHENYLALANINYL-ADENYLATE
1EIYB:1-38,B:152-190; B:400-474THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE
1JJCB:1-38,B:152-190; B:400-474CRYSTAL STRUCTURE AT 2.6A RESOLUTION OF PHENYLALANYL-TRNA SYNTHETASE COMPLEXED WITH PHENYLALANYL-ADENYLATE IN THE PRESENCE OF MANGANESE
1PYSB:1-38,B:152-190; B:400-474PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS
2AKWB:1-38,B:152-190; B:400-474CRYSTAL STRUCTURE OF T.THERMOPHILUS PHENYLALANYL-TRNA SYNTHETASE COMPLEXED WITH P-CL-PHENYLALANINE
2ALYB:1-38,B:152-190; B:400-474CRYSTAL STRUCTURE OF T.THERMOPHILUS PHENYLALANYL-TRNA SYNTHETASE COMPLEXED WITH 5'-O-[N-(L-TYROSYL)SULPHAMOYL]ADENOSINE
2AMCB:1-38,B:152-190; B:400-474CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE COMPLEXED WITH L-TYROSINE
2IY5B:1-38,B:152-190; B:400-474PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNA AND A PHENYLALANYL-ADENYLATE ANALOG
3HFZB:1-38,B:152-190; B:400-474CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PHENYLALANYL-TRNA SYNTHETASE COMPLEXED WITH M-TYROSINE
3TEHB:1-38,B:152-190; B:400-474CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PHENYLALANYL-TRNA SYNTHETASE COMPLEXED WITH L-DOPA
(-)
Family: Excisionase-like (9)
(-)
Protein domain: Excisionase Xis (5)
(-)
Bacteriophage lambda [TaxId: 10710] (5)
1LX8A:REGULATION OF DIRECTIONALITY IN BACTERIOPHAGE LAMBDA SITE-SPECIFIC RECOMBINATION: STRUCTURE OF THE XIS PROTEIN
1PM6A:SOLUTION STRUCTURE OF FULL-LENGTH EXCISIONASE (XIS) FROM BACTERIOPHAGE HK022
1RH6A:; B:BACTERIOPHAGE LAMBDA EXCISIONASE (XIS)-DNA COMPLEX
2IEFA:; B:; C:STRUCTURE OF THE COOPERATIVE EXCISIONASE (XIS)-DNA COMPLEX REVEALS A MICRONUCLEOPROTEIN FILAMENT
2OG0A:; B:CRYSTAL STRUCTURE OF THE LAMBDA XIS-DNA COMPLEX
(-)
Protein domain: mu transposase, DNA-binding domain (4)
(-)
Bacteriophage Mu [TaxId: 10677] (4)
1G4DA:NMR STRUCTURE OF THE MU BACTERIOPHAGE REPRESSOR DNA-BINDING DOMAIN/DNA COMPLEX
1QPMA:NMR STRUCTURE OF THE MU BACTERIOPHAGE REPRESSOR DNA-BINDING DOMAIN
1TNSA:A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
1TNTA:A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
(-)
Family: N-terminal subdomain of bacterial translation initiation factor IF2 (1)
(-)
Protein domain: N-terminal subdomain of bacterial translation initiation factor IF2 (1)
(-)
Escherichia coli [TaxId: 562] (1)
1ND9A:SOLUTION STRUCTURE OF THE N-TERMINAL SUBDOMAIN OF TRANSLATION INITIATION FACTOR IF2
(-)
Family: Terminase gpNU1 subunit domain (1)
(-)
Protein domain: Terminase gpNU1 subunit domain (1)
(-)
Bacteriophage lambda [TaxId: 10710] (1)
1J9IA:; B:STRUCTURE OF THE DNA BINDING DOMAIN OF THE GPNU1 SUBUNIT OF LAMBDA TERMINASE
(-)
Fold: RuvA C-terminal domain-like (106)
(-)
Superfamily: Double-stranded DNA-binding domain (2)
(-)
Family: Double-stranded DNA-binding domain (2)
(-)
Protein domain: Hypothetical protein MTH1615 (1)
(-)
Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
1EIJA:NMR ENSEMBLE OF METHANOBACTERIUM THERMOAUTOTROPHICUM PROTEIN 1615
(-)
Protein domain: Programmed cell death protein 5 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CRUA:8-112SOLUTION STRUCTURE OF PROGRAMMED CELL DEATH 5
(-)
Fold: SAM domain-like (639)
(-)
Superfamily: SAM/Pointed domain (61)
(-)
Family: Pointed domain (12)
(-)
Protein domain: Ets DNA-binding protein pokkuri (Yan) (2)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (2)
1SV0A:; B:CRYSTAL STRUCTURE OF YAN-SAM/MAE-SAM COMPLEX
1SV4A:; B:CRYSTAL STRUCTURE OF YAN-SAM
(-)
Fold: Skp1 dimerisation domain-like (18)
(-)
Superfamily: Skp1 dimerisation domain-like (18)
(-)
Family: Skp1 dimerisation domain-like (13)
(-)
Protein domain: Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1NEXA:116-185; C:116-186CRYSTAL STRUCTURE OF SCSKP1-SCCDC4-CPD PEPTIDE COMPLEX
3MKSA:116-185; C:116-186CRYSTAL STRUCTURE OF YEAST CDC4/SKP1 IN COMPLEX WITH AN ALLOSTERIC INHIBITOR SCF-I2
(-)
Class: All beta proteins (24004)
(-)
Fold: beta-Trefoil (385)
(-)
Superfamily: DNA-binding protein LAG-1 (CSL) (5)
(-)
Family: automated matches (1)
(-)
Protein domain: automated matches (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
3BRGC:205-359CSL (RBP-JK) BOUND TO DNA
(-)
Family: DNA-binding protein LAG-1 (CSL) (4)
(-)
Protein domain: DNA-binding protein LAG-1 (CSL) (4)
(-)
Nematode (Caenorhabditis elegans) [TaxId: 6239] (4)
1TTUA:381-541CRYSTAL STRUCTURE OF CSL BOUND TO DNA
2FO1A:381-541CRYSTAL STRUCTURE OF THE CSL-NOTCH-MASTERMIND TERNARY COMPLEX BOUND TO DNA
3BRDA:381-541CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, P212121
3BRFA:381-541CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, C2221
(-)
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f (364)
(-)
Superfamily: p53-like transcription factors (153)
(-)
Family: DNA-binding domain from NDT80 (14)
(-)
Protein domain: DNA-binding domain from NDT80 (14)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (14)
1M6UA:; B:CRYSTAL STRUCTURE OF A NOVEL DNA-BINDING DOMAIN FROM NDT80, A TRANSCRIPTIONAL ACTIVATOR REQUIRED FOR MEIOSIS IN YEAST
1M7UA:; B:CRYSTAL STRUCTURE OF A NOVEL DNA-BINDING DOMAIN FROM NDT80, A TRANSCRIPTIONAL ACTIVATOR REQUIRED FOR MEIOSIS IN YEAST
1MN4A:STRUCTURE OF NDT80 (RESIDUES 59-340) DNA-BINDING DOMAIN CORE
1MNNA:STRUCTURE OF THE SPORULATION SPECIFIC TRANSCRIPTION FACTOR NDT80 BOUND TO DNA
2ETWA:PRINCIPLES OF PROTEIN-DNA RECOGNITION REVEALED IN THE STRUCTURAL ANALYSIS OF NDT80-MSE DNA COMPLEXES
2EUVA:PRINCIPLES OF PROTEIN-DNA RECOGNITION REVEALED IN THE STRUCTURAL ANALYSIS OF NDT80-MSE DNA COMPLEXES
2EUWA:STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA4T)
2EUXA:STRUCTURE OF A NDT80-DNA COMPLEX (MSE VARIANT VA4G)
2EUZA:STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MC5T)
2EVFA:STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA6T)
2EVGA:STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA7T)
2EVHA:STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA7G)
2EVIA:STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA8T)
2EVJA:STRUCTURE OF AN NDT80-DNA COMPLEX (MSE MUTANT MA9C)
(-)
Family: DNA-binding protein LAG-1 (CSL) (4)
(-)
Protein domain: DNA-binding protein LAG-1 (CSL) (4)
(-)
Nematode (Caenorhabditis elegans) [TaxId: 6239] (4)
1TTUA:196-380CRYSTAL STRUCTURE OF CSL BOUND TO DNA
2FO1A:196-380CRYSTAL STRUCTURE OF THE CSL-NOTCH-MASTERMIND TERNARY COMPLEX BOUND TO DNA
3BRDA:195-380CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, P212121
3BRFA:197-380CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, C2221
(-)
Family: p53 DNA-binding domain-like (80)
(-)
Protein domain: automated matches (46)
(-)
Human (Homo sapiens) [TaxId: 9606] (39)
2AC0A:; B:; C:; D:STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX I)
2ADYA:; B:STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX IV)
2AHIA:; B:; C:; D:STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX III)
2ATAA:; B:; C:; D:STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX II)
2BIMA:; B:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D-R273H
2BINA:HUMAN P53 CORE DOMAIN MUTANT M133L-H168R-V203A-N239Y-N268D
2BIOA:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-R249S-N268D
2BIPA:HUMAN P53 CORE DOMAIN MUTANT M133L-H168R-V203A-N239Y-R249S-N268D
2BIQA:HUMAN P53 CORE DOMAIN MUTANT T123A-M133L-H168R-V203A-N239Y-R249S-N268D
2J1WA:; B:HUMAN P53 CORE DOMAIN MUTANT M133L-V143A-V203A-N239Y-N268D
2J1XA:; B:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-Y220C-N239Y-N268D
2J1YA:; B:; C:; D:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-G245S-N268D
2J1ZA:; B:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D-F270L
2J20A:; B:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D-R273C
2J21A:; B:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-N239Y-N268D-R282W
2OCJA:; B:; C:; D:HUMAN P53 CORE DOMAIN IN THE ABSENCE OF DNA
2VUKA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL-MOLECULE DRUG PHIKAN083
2WGXA:; B:HUMAN P53 CORE DOMAIN MUTANT M133L-V203A-Y236F-N239Y-T253I-N268D
2X0UA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO A 2-AMINO SUBSTITUTED BENZOTHIAZOLE SCAFFOLD
2X0VA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO 4-( TRIFLUOROMETHYL)BENZENE-1,2-DIAMINE
2X0WA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO 5,6-DIMETHOXY-2-METHYLBENZOTHIAZOLE
2XWCA:CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TP73 REFINED AT 1.8 A RESOLUTION
2XWRA:; B:CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN P53 WITH EXTENDED N TERMINUS
2YBGA:; B:; C:; D:STRUCTURE OF LYS120-ACETYLATED P53 CORE DOMAIN
3KMDA:; B:; C:; D:CRYSTAL STRUCTURE OF THE P53 CORE DOMAIN BOUND TO A FULL CONSENSUS SITE AS A SELF-ASSEMBLED TETRAMER
3QYNA:; B:; C:; D:STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 22 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING 2 BASE PAIR SPACER BETWEEN HALF SITES
3US0A:; B:; C:; D:STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 22 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING A TWO BASE PAIR "AT" SPACER BETWEEN HALF SITES
3US1A:; D:STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 22 BASE PAIR RESPONSE ELEMENT CONTAINING A TWO BASE PAIR "GC" SPACER BETWEEN HALF SITES
3VD0A:; B:; C:; D:; I:; J:; K:; L:STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION
3VD1A:; D:; I:; J:; K:; L:; B:; C:STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION
4A63A:; C:; E:; G:; I:; K:CRYSTAL STRUCTURE OF THE P73-ASPP2 COMPLEX AT 2.6A RESOLUTION
4AGLA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL MOLECULE PHIKAN784
4AGMA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL MOLECULE PHIKAN5086
4AGNA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL MOLECULE PHIKAN5116
4AGOA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL MOLECULE PHIKAN5174
4AGPA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL MOLECULE PHIKAN5176
4AGQA:; B:STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO THE STABILIZING SMALL MOLECULE PHIKAN5196
4G82A:; B:CRYSTAL STRUCTURE OF P73 DNA-BINDING DOMAIN TETRAMER BOUND TO A FULL RESPONSE-ELEMENT
4GUOA:; B:; C:; D:; I:; J:; K:; L:STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX WITH 12 BP DNA
(-)
Mouse (Mus musculus) [TaxId: 10090] (7)
2GEQA:; B:CRYSTAL STRUCTURE OF A P53 CORE DIMER BOUND TO DNA
2IOIA:CRYSTAL STRUCTURE OF THE MOUSE P53 CORE DOMAIN AT 1.55 A
2IOMA:MOUSE P53 CORE DOMAIN SOAKED WITH 2-PROPANOL
2IOOA:CRYSTAL STRUCTURE OF THE MOUSE P53 CORE DOMAIN
2P52A:MOUSE P53 DNA-BINDING DOMAIN IN ZINC-FREE OXIDIZED STATE
3EXJA:; B:CRYSTAL STRUCTURE OF A P53 CORE TETRAMER BOUND TO DNA
3EXLA:CRYSTAL STRUCTURE OF A P53 CORE TETRAMER BOUND TO DNA
(-)
Protein domain: p53 tumor suppressor, DNA-binding domain (33)
(-)
Human (Homo sapiens) [TaxId: 9606] (32)
1GZHA:; C:CRYSTAL STRUCTURE OF THE BRCT DOMAINS OF HUMAN 53BP1 BOUND TO THE P53 TUMOR SUPRESSOR
1KZYA:; B:CRYSTAL STRUCTURE OF THE 53BP1 BRCT REGION COMPLEXED TO TUMOR SUPPRESSOR P53
1TSRA:; B:; C:P53 CORE DOMAIN IN COMPLEX WITH DNA
1TUPA:; B:; C:TUMOR SUPPRESSOR P53 COMPLEXED WITH DNA
1UOLA:; B:CRYSTAL STRUCTURE OF THE HUMAN P53 CORE DOMAIN MUTANT M133L/V203A/N239Y/N268D AT 1.9 A RESOLUTION.
1YCSA:P53-53BP2 COMPLEX
2FEJA:SOLUTION STRUCTURE OF HUMAN P53 DNA BINDING DOMAIN.
2H1LM:; N:; O:; P:; Q:; R:; S:; T:; U:; V:; W:; X:THE STRUCTURE OF THE ONCOPROTEIN SV40 LARGE T ANTIGEN AND P53 TUMOR SUPPRESSOR COMPLEX
2PCXA:CRYSTAL STRUCTURE OF P53DBD(R282Q) AT 1.54-ANGSTROM RESOLUTION
3D05A:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S (II)
3D06A:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S (I)
3D07A:; B:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S (III)
3D08A:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S AND SECOND-SITE SUPPRESSOR MUTATION H168R
3D09A:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S AND SECOND-SITE SUPPRESSOR MUTATIONS H168R AND T123A
3D0AA:; B:; C:; D:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S AND SECOND SITE SUPPRESSOR MUTATION H168R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA
3IGKA:DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 2)
3IGLA:DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 1)
3KZ8A:; B:DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 3)
4IBQA:; B:; C:; D:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C
4IBSA:; B:; C:; D:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H (FORM I)
4IBTA:; B:; C:; D:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H AND SECOND-SITE SUPPRESSOR MUTATION T284R
4IBUA:; B:; C:; D:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C AND SECOND-SITE SUPPRESSOR MUTATION T284R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA
4IBVA:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C AND SECOND-SITE SUPPRESSOR MUTATION S240R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA
4IBWA:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H AND SECOND-SITE SUPPRESSOR MUTATION T284R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA
4IBYA:; B:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H AND SECOND-SITE SUPPRESSOR MUTATION S240R
4IBZA:; B:; C:; D:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C AND SECOND-SITE SUPPRESSOR MUTATION T284R
4IJTA:HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H (FORM II)
4KVPA:; D:; B:; C:HUMAN P53 CORE DOMAIN MUTANT V157F
4LO9A:; B:; C:; D:HUMAN P53 CORE DOMAIN MUTANT N235K
4LOEA:; B:; C:; D:HUMAN P53 CORE DOMAIN MUTANT N239Y
4LOFA:HUMAN P53 CORE DOMAIN MUTANT V157F/N235K/N239Y
4MZIA:CRYSTAL STRUCTURE OF A HUMAN MUTANT P53
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1HU8A:; B:; C:CRYSTAL STRUCTURE OF THE MOUSE P53 CORE DNA-BINDING DOMAIN AT 2.7A RESOLUTION
(-)
Protein domain: Transcription factor CEP-1 (1)
(-)
Nematode (Caenorhabditis elegans) [TaxId: 6239] (1)
1T4WA:STRUCTURAL DIFFERENCES IN THE DNA BINDING DOMAINS OF HUMAN P53 AND ITS C. ELEGANS ORTHOLOG CEP-1: STRUCTURE OF C. ELEGANS CEP-1
(-)
Family: Rel/Dorsal transcription factors, DNA-binding domain (34)
(-)
Protein domain: automated matches (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
3DO7B:37-226X-RAY STRUCTURE OF A NF-KB P52/RELB/DNA COMPLEX
(-)
Mouse (Mus musculus) [TaxId: 10090] (2)
2V2TB:38-250X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX
3DO7A:88-278X-RAY STRUCTURE OF A NF-KB P52/RELB/DNA COMPLEX
(-)
Protein domain: Dorsal homologue Gambif1 (1)
(-)
African malaria mosquito (Anopheles gambiae) [TaxId: 7165] (1)
1BVOA:DORSAL HOMOLOGUE GAMBIF1 BOUND TO DNA
(-)
Protein domain: p50 subunit of NF-kappa B (NFKB), N-terminal domain (9)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1SVCP:43-250NFKB P50 HOMODIMER BOUND TO DNA
2O61B:37-250CRYSTAL STRUCTURE OF NFKB, IRF7, IRF3 BOUND TO THE INTERFERON-B ENHANCER
(-)
Mouse (Mus musculus) [TaxId: 10090] (7)
1LE5B:38-250; F:38-250CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB
1LE9B:39-250; F:39-250CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THE IG/HIV-KB SITI
1LEIB:39-250THE KB DNA SEQUENCE FROM THE HLV-LTR FUNCTIONS AS AN ALLOSTERIC REGULATOR OF HIV TRANSCRIPTION
1NFKA:39-250; B:39-250STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMER
1OOAA:38-250; B:38-250CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH-AFFINITY RNA APTAMER
1VKXB:339-546CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA
2I9TB:339-550STRUCTURE OF NF-KB P65-P50 HETERODIMER BOUND TO PRDII ELEMENT OF B-INTERFERON PROMOTER
(-)
Protein domain: p52 subunit of NF-kappa B (NFKB), N-terminal domain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1A3QA:37-226; B:37-226HUMAN NF-KAPPA-B P52 BOUND TO DNA
(-)
Protein domain: p65 subunit of NF-kappa B (NFKB), N-terminal domain (10)
(-)
Chicken (Gallus gallus), C-rel [TaxId: 9031] (1)
1GJIA:7-181; B:7-181CRYSTAL STRUCTURE OF C-REL BOUND TO DNA
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1NFIA:20-189; C:20-189I-KAPPA-B-ALPHA/NF-KAPPA-B COMPLEX
(-)
Mouse (Mus musculus) [TaxId: 10090] (8)
1IKNA:19-191IKAPPABALPHA/NF-KAPPAB COMPLEX
1LE5A:18-191; E:18-191CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB
1LE9A:19-191; E:19-191CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THE IG/HIV-KB SITI
1LEIA:19-191THE KB DNA SEQUENCE FROM THE HLV-LTR FUNCTIONS AS AN ALLOSTERIC REGULATOR OF HIV TRANSCRIPTION
1RAMA:19-191; B:19-191A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER
1VKXA:19-191CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA
2I9TA:17-190STRUCTURE OF NF-KB P65-P50 HETERODIMER BOUND TO PRDII ELEMENT OF B-INTERFERON PROMOTER
2RAMA:19-191; B:19-191A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER
(-)
Protein domain: T-cell transcription factor NFAT1 (NFATC), DNA-binding domain (9)
(-)
Human (Homo sapiens) [TaxId: 9606] (9)
1A02N:399-576STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND JUN BOUND TO DNA
1A66A:SOLUTION NMR STRUCTURE OF THE CORE NFATC1/DNA COMPLEX, 18 STRUCTURES
1NFAA:HUMAN TRANSCRIPTION FACTOR NFATC DNA BINDING DOMAIN, NMR, 10 STRUCTURES
1OWRM:395-575; N:395-575; P:395-575; Q:395-575CRYSTAL STRUCTURE OF HUMAN NFAT1 BOUND MONOMERICALLY TO DNA
1P7HL:393-575; M:393-575; N:393-575; O:393-575STRUCTURE OF NFAT1 BOUND AS A DIMER TO THE HIV-1 LTR KB ELEMENT
1PZUB:399-571; D:399-571; H:399-571; I:399-571; L:399-571; M:399-571AN ASYMMETRIC NFAT1-RHR HOMODIMER ON A PSEUDO-PALINDROMIC, KAPPA-B SITE
1S9KC:399-575CRYSTAL STRUCTURE OF HUMAN NFAT1 AND FOS-JUN ON THE IL-2 ARRE1 SITE
2AS5M:396-575; N:396-575STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT AND FOXP2 BOUND SPECIFICALLY TO DNA.
2O93L:392-575; M:395-575; O:392-575CRYSTAL STRUCTURE OF NFAT BOUND TO THE HIV-1 LTR TANDEM KAPPAB ENHANCER ELEMENT
(-)
Protein domain: T-cell transcription factor NFAT5 (TONEBP), DNA-binding domain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1IMHC:188-367; D:188-367TONEBP/DNA COMPLEX
(-)
Family: STAT DNA-binding domain (4)
(-)
Protein domain: STAT homologue (2)
(-)
Slime mold (Dictyostelium discoideum) [TaxId: 44689] (2)
1UURA:360-576STRUCTURE OF AN ACTIVATED DICTYOSTELIUM STAT IN ITS DNA-UNBOUND FORM
1UUSA:360-576STRUCTURE OF AN ACTIVATED DICTYOSTELIUM STAT IN ITS DNA-UNBOUND FORM
(-)
Protein domain: STAT-1, DNA-binding domain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1BF5A:317-568TYROSINE PHOSPHORYLATED STAT-1/DNA COMPLEX
(-)
Protein domain: STAT3b (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1BG1A:322-575TRANSCRIPTION FACTOR STAT3B/DNA COMPLEX
(-)
Fold: DNA-binding pseudobarrel domain (3)
(-)
Superfamily: DNA-binding pseudobarrel domain (3)
(-)
Family: B3 DNA binding domain (2)
(-)
Protein domain: At1g16640 (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1YELA:1-102STRUCTURE OF THE HYPOTHETICAL ARABIDOPSIS THALIANA PROTEIN AT1G16640.1
(-)
Protein domain: DNA-binding protein RAV1 (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1WIDA:SOLUTION STRUCTURE OF THE B3 DNA-BINDING DOMAIN OF RAV1
(-)
Family: Type II restriction endonuclease effector domain (1)
(-)
Protein domain: Restriction endonuclease EcoRII, N-terminal domain (1)
(-)
Escherichia coli [TaxId: 562] (1)
1NA6A:4-178; B:4-178CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE ECORII MUTANT R88A
(-)
Fold: HSP40/DnaJ peptide-binding domain (6)
(-)
Superfamily: HSP40/DnaJ peptide-binding domain (6)
(-)
Family: automated matches (3)
(-)
Protein domain: automated matches (3)
(-)
Cryptosporidium parvum [TaxId: 353152] (1)
2Q2GA:4-86; A:87-179; B:7-86; B:87-179CRYSTAL STRUCTURE OF DIMERIZATION DOMAIN OF HSP40 FROM CRYPTOSPORIDIUM PARVUM, CGD2_1800
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
2QLDA:162-245; A:246-335HUMAN HSP40 HDJ1
3AGXA:165-245; A:246-340; B:165-245; B:246-340CRYSTAL STRUCTURE OF HUMAN HSP40 HDJ1 PEPTIDE-BINDING DOMAIN
(-)
Family: HSP40/DnaJ peptide-binding domain (3)
(-)
Protein domain: Heat shock protein 40 Sis1 (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1C3GA:180-259; A:260-349S. CEREVISIAE HEAT SHOCK PROTEIN 40 SIS1
2B26A:180-259; A:260-349; B:180-259; B:260-349THE CRYSTAL STRUCTURE OF THE PROTEIN COMPLEX OF YEAST HSP40 SIS1 AND HSP70 SSA1
(-)
Protein domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1NLTA:110-138,A:213-257; A:258-337THE CRYSTAL STRUCTURE OF HSP40 YDJ1
(-)
Fold: Immunoglobulin-like beta-sandwich (7299)
(-)
Superfamily: E set domains (509)
(-)
Family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain (56)
(-)
Protein domain: DNA-binding protein LAG-1 (CSL) (4)
(-)
Nematode (Caenorhabditis elegans) [TaxId: 6239] (4)
1TTUA:542-660CRYSTAL STRUCTURE OF CSL BOUND TO DNA
2FO1A:542-660CRYSTAL STRUCTURE OF THE CSL-NOTCH-MASTERMIND TERNARY COMPLEX BOUND TO DNA
3BRDA:542-661CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, P212121
3BRFA:542-660CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, C2221
(-)
Fold: OB-fold (1179)
(-)
Superfamily: Nucleic acid-binding proteins (590)
(-)
Family: Cold shock DNA-binding domain-like (310)
(-)
Protein domain: Archaeal initiation factor-1a, aIF1a (1)
(-)
Methanococcus jannaschii [TaxId: 2190] (1)
1JT8A:ARCHAEAL INITIATION FACTOR-1A, AIF-1A
(-)
Protein domain: automated matches (4)
(-)
Mycobacterium tuberculosis [TaxId: 83332] (1)
3I4OA:; B:CRYSTAL STRUCTURE OF TRANSLATION INITIATION FACTOR 1 FROM MYCOBACTERIUM TUBERCULOSIS
(-)
Neisseria meningitidis [TaxId: 122586] (1)
3CAMA:; B:CRYSTAL STRUCTURE OF THE COLD SHOCK DOMAIN PROTEIN FROM NEISSERIA MENINGITIDIS
(-)
Salmonella typhimurium [TaxId: 90371] (1)
3I2ZA:; B:STRUCTURE OF COLD SHOCK PROTEIN E FROM SALMONELLA TYPHIMURIUM
(-)
Thermus thermophilus HB8 [TaxId: 300852] (1)
3A0JA:; B:CRYSTAL STRUCTURE OF COLD SHOCK PROTEIN 1 FROM THERMUS THERMOPHILUS HB8
(-)
Protein domain: C-terminal domain of eIF5a homologue (Hex1) (1)
(-)
Fungus (Neurospora crassa) [TaxId: 5141] (1)
1KHIA:103-173CRYSTAL STRUCTURE OF HEX1
(-)
Protein domain: C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a) (6)
(-)
Leishmania infantum [TaxId: 5671] (1)
1X6OA:87-165STRUCTURAL ANALYSIS OF LEISHMANIA BRAZILIENSIS EUKARYOTIC INITIATION FACTOR 5A
(-)
Methanococcus jannaschii [TaxId: 2190] (2)
1EIFA:74-133EUKARYOTIC TRANSLATION INITIATION FACTOR 5A FROM METHANOCOCCUS JANNASCHII
2EIFA:74-132EUKARYOTIC TRANSLATION INITIATION FACTOR 5A FROM METHANOCOCCUS JANNASCHII
(-)
Pyrobaculum aerophilum [TaxId: 13773] (1)
1BKBA:75-139INITIATION FACTOR 5A FROM ARCHEBACTERIUM PYROBACULUM AEROPHILUM
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
1IZ6A:71-137; B:71-137; C:71-136CRYSTAL STRUCTURE OF TRANSLATION INITIATION FACTOR 5A FROM PYROCOCCUS HORIKOSHII
(-)
Trypanosome (Leishmania mexicana) [TaxId: 5665] (1)
1XTDA:95-172STRUCTURAL ANALYSIS OF LEISHMANIA MEXICANA EUKARYOTIC INITIATION FACTOR 5A
(-)
Protein domain: C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) (8)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (6)
1Y14B:81-171; D:81-171CRYSTAL STRUCTURE OF YEAST SUBCOMPLEX OF RPB4 AND RPB7
2B8KG:81-17112-SUBUNIT RNA POLYMERASE II
2JA5G:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A
2JA6G:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B
2JA7G:81-171; S:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C
2JA8G:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2C35B:78-171; D:78-171; F:78-171; H:78-171SUBUNITS RPB4 AND RPB7 OF HUMAN RNA POLYMERASE II
(-)
Methanococcus jannaschii [TaxId: 2190] (1)
1GO3E:79-184; M:79-181STRUCTURE OF AN ARCHEAL HOMOLOG OF THE EUKARYOTIC RNA POLYMERASE II RPB4/RPB7 COMPLEX
(-)
Protein domain: Cold shock domain protein E1 (UNR) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WFQA:SOLUTION STRUCTURE OF THE FIRST COLD-SHOCK DOMAIN OF THE HUMAN KIAA0885 PROTEIN (UNR PROTEIN)
(-)
Protein domain: Elongation factor P middle and C-terminal domains (1)
(-)
Thermus thermophilus HB8 [TaxId: 300852] (1)
1UEBA:64-126; A:127-184; B:264-326; B:327-384CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR P FROM THERMUS THERMOPHILUS HB8
(-)
Protein domain: Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain (5)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1Q46A:2-88CRYSTAL STRUCTURE OF THE EIF2 ALPHA SUBUNIT FROM SACCHAROMYCES CEREVISIA
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1KL9A:3-88CRYSTAL STRUCTURE OF THE N-TERMINAL SEGMENT OF HUMAN EUKARYOTIC INITIATION FACTOR 2ALPHA
1Q8KA:3-88SOLUTION STRUCTURE OF ALPHA SUBUNIT OF HUMAN EIF2
(-)
Sulfolobus solfataricus [TaxId: 2287] (2)
2AHOB:1-84STRUCTURE OF THE ARCHAEAL INITIATION FACTOR EIF2 ALPHA-GAMMA HETERODIMER FROM SULFOLOBUS SOLFATARICUS COMPLEXED WITH GDPNP
3CW2C:1-84; D:1-84; G:1-84; H:1-84CRYSTAL STRUCTURE OF THE INTACT ARCHAEAL TRANSLATION INITIATION FACTOR 2 FROM SULFOLOBUS SOLFATARICUS .
(-)
Protein domain: Exoribonuclease 2, RNB (3)
(-)
Escherichia coli [TaxId: 562] (3)
2ID0A:558-644; C:83-172; C:5-82; D:558-644; D:83-172; D:5-82; A:83-172; A:5-82; B:558-644; B:83-172; B:5-82; C:558-644ESCHERICHIA COLI RNASE II
2IX0A:83-172; A:4-82; A:558-644RNASE II
2IX1A:83-172; A:558-643; A:1-82RNASE II D209N MUTANT
(-)
Protein domain: Exosome complex exonuclease RRP44 (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
2VNUD:400-494; D:911-998; D:252-399CRYSTAL STRUCTURE OF SC RRP44
(-)
Protein domain: Exosome component 1, EXOSC1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2NN6I:61-185STRUCTURE OF THE HUMAN RNA EXOSOME COMPOSED OF RRP41, RRP45, RRP46, RRP43, MTR3, RRP42, CSL4, RRP4, AND RRP40
(-)
Protein domain: Major cold shock protein (21)
(-)
Bacillus caldolyticus [TaxId: 1394] (7)
1C9OA:; B:CRYSTAL STRUCTURE ANALYSIS OF THE BACILLUS CALDOLYTICUS COLD SHOCK PROTEIN BC-CSP
1HZ9A:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1HZAA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1HZBA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1HZCA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1I5FA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
2HAXA:; B:CRYSTAL STRUCTURE OF BACILLUS CALDOLYTICUS COLD SHOCK PROTEIN IN COMPLEX WITH HEXATHYMIDINE
(-)
Bacillus subtilis [TaxId: 1423] (10)
1CSPA:CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
1CSQA:CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
1NMFA:MAJOR COLD-SHOCK PROTEIN, NMR, 20 STRUCTURES
1NMGA:MAJOR COLD-SHOCK PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
2ES2A:CRYSTAL STRUCTURE ANALYSIS OF THE BACILLUS SUBTILIS COLD SHOCK PROTEIN BS-CSPB IN COMPLEX WITH HEXATHYMIDINE
2F52A:SOLUTION STRUCTURE OF COLD SHOCK PROTEIN CSPB FROM BACILLUS SUBTILIS IN COMPLEX WITH HEPTATHYMIDINE
2I5LX:CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COLD SHOCK PROTEIN VARIANT BS-CSPB M1R/E3K/K65I
2I5MX:CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COLD SHOCK PROTEIN CSPB VARIANT A46K S48R
3PF4A:; B:CRYSTAL STRUCTURE OF BS-CSPB IN COMPLEX WITH R(GUCUUUA)
3PF5A:; B:CRYSTAL STRUCTURE OF BS-CSPB IN COMPLEX WITH RU6
(-)
Escherichia coli [TaxId: 562] (3)
1MJCA:CRYSTAL STRUCTURE OF CSPA, THE MAJOR COLD SHOCK PROTEIN OF ESCHERICHIA COLI
2L15A:SOLUTION STRUCTURE OF COLD SHOCK PROTEIN CSPA USING COMBINED NMR AND CS-ROSETTA METHOD
3MEFA:MAJOR COLD-SHOCK PROTEIN FROM ESCHERICHIA COLI SOLUTION NMR STRUCTURE
(-)
Thermotoga maritima [TaxId: 2336] (1)
1G6PA:SOLUTION NMR STRUCTURE OF THE COLD SHOCK PROTEIN FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA
(-)
Protein domain: N-terminal domain of ribosomal protein L2 (79)
(-)
Bacillus stearothermophilus [TaxId: 1422] (1)
1RL2A:60-125; B:60-125RIBOSOMAL PROTEIN L2 RNA-BINDING DOMAIN FROM BACILLUS STEAROTHERMOPHILUS
(-)
Deinococcus radiodurans [TaxId: 1299] (5)
1XBPA:33-127INHIBITION OF PEPTIDE BOND FORMATION BY PLEUROMUTILINS: THE STRUCTURE OF THE 50S RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS IN COMPLEX WITH TIAMULIN
2ZJPA:33-127THIOPEPTIDE ANTIBIOTIC NOSIHEPTIDE BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
2ZJQA:33-127INTERACTION OF L7 WITH L11 INDUCED BY MICROCCOCIN BINDING TO THE DEINOCOCCUS RADIODURANS 50S SUBUNIT
2ZJRA:33-127REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS
3CF5A:33-127THIOPEPTIDE ANTIBIOTIC THIOSTREPTON BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
(-)
Escherichia coli [TaxId: 562] (27)
2J28C:61-124MODEL OF E. COLI SRP BOUND TO 70S RNCS
2RDOC:61-12450S SUBUNIT WITH EF-G(GDPNP) AND RRF BOUND
3BBXC:61-124THE HSP15 PROTEIN FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX
(-)
Haloarcula marismortui [TaxId: 2238] (40)
1FFKA:1-90CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
1JJ2A:1-90FULLY REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
1K73C:1-90CO-CRYSTAL STRUCTURE OF ANISOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
1K8AC:1-90CO-CRYSTAL STRUCTURE OF CARBOMYCIN A BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1K9MC:1-90CO-CRYSTAL STRUCTURE OF TYLOSIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1KC8C:1-90CO-CRYSTAL STRUCTURE OF BLASTICIDIN S BOUND TO THE 50S RIBOSOMAL SUBUNIT
1KD1C:1-90CO-CRYSTAL STRUCTURE OF SPIRAMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1KQSA:1-90THE HALOARCULA MARISMORTUI 50S COMPLEXED WITH A PRETRANSLOCATIONAL INTERMEDIATE IN PROTEIN SYNTHESIS
1M1KC:1-90CO-CRYSTAL STRUCTURE OF AZITHROMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1M90C:1-90CO-CRYSTAL STRUCTURE OF CCA-PHE-CAPROIC ACID-BIOTIN AND SPARSOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
1N8RC:1-90STRUCTURE OF LARGE RIBOSOMAL SUBUNIT IN COMPLEX WITH VIRGINIAMYCIN M
1NJIC:1-90STRUCTURE OF CHLORAMPHENICOL BOUND TO THE 50S RIBOSOMAL SUBUNIT
1Q7YC:1-90CRYSTAL STRUCTURE OF CCDAP-PUROMYCIN BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE 50S RIBOSOMAL SUBUNIT
1Q81C:1-90CRYSTAL STRUCTURE OF MINIHELIX WITH 3' PUROMYCIN BOUND TO A-SITE OF THE 50S RIBOSOMAL SUBUNIT.
1Q82C:1-90CRYSTAL STRUCTURE OF CC-PUROMYCIN BOUND TO THE A-SITE OF THE 50S RIBOSOMAL SUBUNIT
1Q86C:1-90CRYSTAL STRUCTURE OF CCA-PHE-CAP-BIOTIN BOUND SIMULTANEOUSLY AT HALF OCCUPANCY TO BOTH THE A-SITE AND P-SITE OF THE THE 50S RIBOSOMAL SUBUNIT.
1QVFA:1-90STRUCTURE OF A DEACYLATED TRNA MINIHELIX BOUND TO THE E SITE OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1QVGA:1-90STRUCTURE OF CCA OLIGONUCLEOTIDE BOUND TO THE TRNA BINDING SITES OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1S72A:1-90REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
1VQ4A:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ5A:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ6A:1-90THE STRUCTURE OF C-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ7A:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ8A:1-90THE STRUCTURE OF CCDA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ9A:1-90THE STRUCTURE OF CCA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQKA:1-90THE STRUCTURE OF CCDA-PHE-CAP-BIO BOUND TO THE A SITE OF THE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQLA:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCSN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQMA:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQNA:1-90THE STRUCTURE OF CC-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQOA:1-90THE STRUCTURE OF CCPMN BOUND TO THE LARGE RIBOSOMAL SUBUNIT HALOARCULA MARISMORTUI
1VQPA:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAP" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YHQA:1-90CRYSTAL STRUCTURE OF AZITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YI2A:1-90CRYSTAL STRUCTURE OF ERYTHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YIJA:1-90CRYSTAL STRUCTURE OF TELITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YITA:1-90CRYSTAL STRUCTURE OF VIRGINIAMYCIN M AND S BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJ9A:1-90CRYSTAL STRUCTURE OF THE MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI CONTAINING A THREE RESIDUE DELETION IN L22
1YJNA:1-90CRYSTAL STRUCTURE OF CLINDAMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJWA:1-90CRYSTAL STRUCTURE OF QUINUPRISTIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
2OTJA:1-9013-DEOXYTEDANOLIDE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
2OTLA:1-90GIRODAZOLE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
(-)
Protein domain: Probable GTPase EngC (YjeQ), N-terminal domain (2)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1T9HA:1-67THE CRYSTAL STRUCTURE OF YLOQ, A CIRCULARLY PERMUTED GTPASE.
(-)
Thermotoga maritima [TaxId: 2336] (1)
1U0LA:3-68; B:303-368; C:603-668CRYSTAL STRUCTURE OF YJEQ FROM THERMOTOGA MARITIMA
(-)
Protein domain: Rho termination factor, RNA-binding domain (9)
(-)
Escherichia coli [TaxId: 562] (9)
1A62A:48-125CRYSTAL STRUCTURE OF THE RNA-BINDING DOMAIN OF THE TRANSCRIPTIONAL TERMINATOR PROTEIN RHO
1A63A:48-130THE NMR STRUCTURE OF THE RNA BINDING DOMAIN OF E.COLI RHO FACTOR SUGGESTS POSSIBLE RNA-PROTEIN INTERACTIONS, 10 STRUCTURES
1A8VA:48-118; B:48-118STRUCTURE OF THE RNA-BINDING DOMAIN OF THE RHO TRANSCRIPTION TERMINATOR
1PV4A:48-126; B:51-126; C:48-126; D:48-126; E:48-126; F:48-126X-RAY CRYSTAL STRUCTURE OF THE RHO TRANSCRIPTION TERMINATION FACTOR IN COMPLEX WITH SINGLE STRANDED DNA
1PVOA:48-126; B:51-126; C:48-126; D:48-126; E:48-126; F:48-126X-RAY CRYSTAL STRUCTURE OF RHO TRANSCRIPTION TERMINATION FACTOR IN COMPLEX WITH SSRNA SUBSTRATE AND ANPPNP
1XPOA:48-129; B:48-129; C:48-129; D:48-129; E:48-129; F:48-129STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC BICYCLOMYCIN
1XPRA:48-126; B:48-126; C:48-126; D:48-126; E:48-126; F:48-126STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC 5A-FORMYLBICYCLOMYCIN (FB)
1XPUA:48-126; E:48-126; F:48-126; B:48-126; C:48-126; D:48-126STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC 5A-(3-FORMYLPHENYLSULFANYL)-DIHYDROBICYCLOMYCIN (FPDB)
2A8VA:48-118; B:48-118; C:48-118RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX
(-)
Protein domain: Ribonuclease II family protein DR0020 (2)
(-)
Deinococcus radiodurans [TaxId: 1299] (2)
2R7DA:404-461; B:404-461; C:404-461CRYSTAL STRUCTURE OF RIBONUCLEASE II FAMILY PROTEIN FROM DEINOCOCCUS RADIODURANS, TRICLINIC CRYSTAL FORM. NORTHEAST STRUCTURAL GENOMICS TARGET DRR63
2R7FA:404-461CRYSTAL STRUCTURE OF RIBONUCLEASE II FAMILY PROTEIN FROM DEINOCOCCUS RADIODURANS, HEXAGONAL CRYSTAL FORM. NORTHEAST STRUCTURAL GENOMICS TARGET DRR63
(-)
Protein domain: Ribosomal protein S12 (61)
(-)
Escherichia coli [TaxId: 562] (25)
3DEGD:1-123COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP
(-)
Thermus thermophilus [TaxId: 274] (36)
1FJGL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
1HNWL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
1HNXL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
1HNZL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
1HR0L:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1I94L:CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
1I95L:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
1I96L:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
1I97L:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
1J5EL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT
1N32L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N33L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N34L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
1N36L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
1XMOL:CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
1XMQL:CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
1XNQL:STRUCTURE OF AN INOSINE-ADENINE WOBBLE BASE PAIR COMPLEX IN THE CONTEXT OF THE DECODING CENTER
1XNRL:CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
2E5LL:5-122A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
2F4VL:5-12230S RIBOSOME + DESIGNER ANTIBIOTIC
2HHHL:5-122CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
2UU9L:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUG-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUAL:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUC-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUBL:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUCL:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUA-CODON IN THE A-SITE AND PAROMOMYCIN.
2UXCL:5-122CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
(-)
Protein domain: Ribosomal protein S17 (72)
(-)
Bacillus stearothermophilus [TaxId: 1422] (1)
1RIPA:RIBOSOMAL PROTEIN S17: CHARACTERIZATION OF THE THREE-DIMENSIONAL STRUCTURE BY 1H-AND 15N-NMR
(-)
Thermus thermophilus [TaxId: 274] (45)
1FJGQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
1HNWQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
1HNXQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
1HNZQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
1HR0Q:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1I94Q:CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
1I95Q:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
1I96Q:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
1I97Q:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
1J5EQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT
1N32Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N33Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N34Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
1N36Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
1XMOQ:CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
1XMQQ:CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
1XNQQ:STRUCTURE OF AN INOSINE-ADENINE WOBBLE BASE PAIR COMPLEX IN THE CONTEXT OF THE DECODING CENTER
1XNRQ:CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
2E5LQ:2-105A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
2F4VQ:2-10530S RIBOSOME + DESIGNER ANTIBIOTIC
2HHHQ:2-105CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
2UU9Q:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUG-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUAQ:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUC-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUBQ:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUCQ:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUA-CODON IN THE A-SITE AND PAROMOMYCIN.
2UXBQ:2-105CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXCQ:2-105CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXDQ:2-105CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2VQEQ:2-105MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
2VQFQ:2-105MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
(-)
Protein domain: Ribosomal protein S28e (2)
(-)
Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
1NE3A:SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S28E FROM METHANOBACTERIUM THERMOAUTOTROPHICUM. ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS TARGET MTH0256_1_68; NORTHEAST STRUCTURAL GENOMICS TARGET TT744
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
1NY4A:SOLUTION STRUCTURE OF THE 30S RIBOSOMAL PROTEIN S28E FROM PYROCOCCUS HORIKOSHII. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET JR19.
(-)
Protein domain: S1 domain of NusA (5)
(-)
Mycobacterium tuberculosis [TaxId: 1773] (3)
1K0RA:108-183; B:108-183CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS NUSA
2ASBA:108-183STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX
2ATWA:108-183; C:108-183STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX
(-)
Thermotoga maritima [TaxId: 2336] (2)
1HH2P:127-198CRYSTAL STRUCTURE OF NUSA FROM THERMOTOGA MARITIMA
1L2FA:127-198CRYSTAL STRUCTURE OF NUSA FROM THERMOTOGA MARITIMA: A STRUCTURE-BASED ROLE OF THE N-TERMINAL DOMAIN
(-)
Protein domain: S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase (2)
(-)
Escherichia coli [TaxId: 562] (1)
1SROA:S1 RNA BINDING DOMAIN, NMR, 20 STRUCTURES
(-)
Streptomyces antibioticus [TaxId: 1890] (1)
1E3PA:656-717TUNGSTATE DERIVATIVE OF STREPTOMYCES ANTIBIOTICUS PNPASE/ GPSI ENZYME
(-)
Protein domain: S1-domain of exosome complex RNA-binding protein 1, ECR1 (6)
(-)
Aeropyrum pernix [TaxId: 56636] (1)
2Z0SA:60-147CRYSTAL STRUCTURE OF PUTATIVE EXOSOME COMPLEX RNA-BINDING PROTEIN
(-)
Archaeoglobus fulgidus [TaxId: 2234] (1)
2BA0A:53-135; B:53-135; C:53-135ARCHAEAL EXOSOME CORE
(-)
Sulfolobus solfataricus [TaxId: 2287] (4)
2JE6I:66-152STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME
2JEAI:66-152STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA
4BA1I:66-152ARCHAEAL EXOSOME (RRP4-RRP41(D182A)-RRP42) BOUND TO INORGANIC PHOSPHATE
4BA2I:66-152ARCHAEAL EXOSOME (RRP4-RRP41(D182A)-RRP42) BOUND TO INORGANIC PHOSPHATE
(-)
Protein domain: S1-domain of exosome component 3 (RRP40) (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
2JA9A:62-151STRUCTURE OF THE N-TERMINAL DELETION OF YEAST EXOSOME COMPONENT RRP40
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2NN6G:107-194STRUCTURE OF THE HUMAN RNA EXOSOME COMPOSED OF RRP41, RRP45, RRP46, RRP43, MTR3, RRP42, CSL4, RRP4, AND RRP40
(-)
Protein domain: S1-domain of Ribonuclease E (3)
(-)
Escherichia coli [TaxId: 562] (3)
1SLJA:SOLUTION STRUCTURE OF THE S1 DOMAIN OF RNASE E FROM E. COLI
1SMXA:; B:CRYSTAL STRUCTURE OF THE S1 DOMAIN OF RNASE E FROM E. COLI (NATIVE)
1SN8A:; B:CRYSTAL STRUCTURE OF THE S1 DOMAIN OF RNASE E FROM E. COLI (PB DERIVATIVE)
(-)
Protein domain: S1-domain of Ribosomal RNA-processing protein 4, RRP4 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2NN6H:73-167STRUCTURE OF THE HUMAN RNA EXOSOME COMPOSED OF RRP41, RRP45, RRP46, RRP43, MTR3, RRP42, CSL4, RRP4, AND RRP40
(-)
Protein domain: S1-domain of RRP5 protein homolog (PDCD11, KIAA0185) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WI5A:SOLUTION STRUCTURE OF THE S1 RNA BINDING DOMAIN FROM HUMAN HYPOTHETICAL PROTEIN BAA11502
(-)
Protein domain: Tex S1-domain (3)
(-)
Pseudomonas aeruginosa [TaxId: 287] (3)
2OCEA:637-730CRYSTAL STRUCTURE OF TEX FAMILY PROTEIN PA5201 FROM PSEUDOMONAS AERUGINOSA
3BZCA:637-730CRYSTAL STRUCTURE OF THE TEX PROTEIN FROM PSEUDOMONAS AERUGINOSA, CRYSTAL FORM I
3BZKA:637-730CRYSTAL STRUCTURE OF THE TEX PROTEIN FROM PSEUDOMONAS AERUGINOSA, CRYSTAL FORM 2
(-)
Protein domain: Translation initiation factor-1a, eIF1a (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1D7QA:HUMAN TRANSLATION INITIATION FACTOR EIF1A
(-)
Protein domain: Translational initiation factor 1, IF1 (3)
(-)
Escherichia coli [TaxId: 562] (3)
1AH9A:THE STRUCTURE OF THE TRANSLATIONAL INITIATION FACTOR IF1 FROM ESCHERICHIA COLI, NMR, 19 STRUCTURES
1HR0W:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1ZO1W:1-71IF2, IF1, AND TRNA FITTED TO CRYO-EM DATA OF E. COLI 70S INITIATION COMPLEX
(-)
Protein domain: Viral structural mimic of eIF2alpha (2)
(-)
Myxoma virus, m156r [TaxId: 10273] (1)
1JJGA:SOLUTION STRUCTURE OF MYXOMA VIRUS PROTEIN M156R
(-)
Vaccinia virus [TaxId: 10245] (1)
1LUZA:; B:CRYSTAL STRUCTURE OF THE K3L PROTEIN FROM VACCINIA VIRUS (WISCONSIN STRAIN)
(-)
Protein domain: Y-box protein 1 cold shock domain (YB1-CSD) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1H95A:SOLUTION STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING COLD SHOCK DOMAIN (CSD) OF HUMAN Y-BOX PROTEIN 1 (YB1) DETERMINED BY NMR (10 LOWEST ENERGY STRUCTURES)
(-)
Family: Phage ssDNA-binding proteins (24)
(-)
Protein domain: automated matches (1)
(-)
Enterobacteria phage [TaxId: 12353] (1)
2A1KA:; B:RB69 SINGLE-STRANDED DNA BINDING PROTEIN CORE DOMAIN
(-)
Protein domain: Gene 32 protein (gp32) core (2)
(-)
Bacteriophage T4 [TaxId: 10665] (1)
1GPCA:CORE GP32, DNA-BINDING PROTEIN
(-)
Enterobacteria phage RB69 [TaxId: 12353] (1)
2ATQB:32-241RB69 SINGLE-STRANDED DNA BINDING PROTEIN-DNA POLYMERASE FUSION
(-)
Protein domain: Gene V protein (20)
(-)
Enterobacteria phage M13, including coliphage f1 [TaxId: 10870] (19)
1AE2A:MUTANT L32R OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
1AE3A:MUTANT R82C OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
1GKHA:MUTANT K69H OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
1GVPA:GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
1VQAA:GENE V PROTEIN MUTANT WITH VAL 35 REPLACED BY ALA 35 AND ILE 47 REPLACED BY LEU 47 (V35A, I47L)
1VQBA:GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
1VQCA:GENE V PROTEIN MUTANT WITH VAL 35 REPLACED BY ILE 35 AND ILE 47 REPLACED BY PHE 47 (V35I, I47F)
1VQDA:GENE V PROTEIN MUTANT WITH VAL 35 REPLACED BY ILE 35 AND ILE 47 REPLACED BY LEU 47 (V35I, I47L)
1VQEA:GENE V PROTEIN MUTANT WITH VAL 35 REPLACED BY ILE 35 AND ILE 47 REPLACED BY MET 47 (V35I, I47M)
1VQFA:GENE V PROTEIN MUTANT WITH VAL 35 REPLACED BY ILE 35 AND ILE 47 REPLACED BY VAL 47 (V35I, I47V)
1VQGA:GENE V PROTEIN MUTANT WITH ILE 47 REPLACED BY LEU 47 (I47L)
1VQHA:GENE V PROTEIN MUTANT WITH ILE 47 REPLACED BY MET 47 (I47M)
1VQIA:GENE V PROTEIN MUTANT WITH ILE 47 REPLACED BY VAL 47 (I47V)
1VQJA:GENE V PROTEIN MUTANT WITH VAL 35 REPLACED BY ILE 35 (V35I)
1YHAA:; B:CRYSTAL STRUCTURES OF Y41H AND Y41F MUTANTS OF GENE V PROTEIN FROM FF PHAGE SUGGEST POSSIBLE PROTEIN-PROTEIN INTERACTIONS IN GVP-SSDNA COMPLEX
1YHBA:CRYSTAL STRUCTURES OF Y41H AND Y41F MUTANTS OF GENE V PROTEIN FROM FF PHAGE SUGGEST POSSIBLE PROTEIN-PROTEIN INTERACTIONS IN GVP-SSDNA COMPLEX
2GN5A:REFINED STRUCTURE OF THE GENE 5 DNA BINDING PROTEIN FROM BACTERIOPHAGE FD
2GVAA:; B:REFINED SOLUTION STRUCTURE OF THE TYR 41--> HIS MUTANT OF THE M13 GENE V PROTEIN. A COMPARISON WITH THE CRYSTAL STRUCTURE
2GVBA:; B:REFINED SOLUTION STRUCTURE OF THE TYR 41--> HIS MUTANT OF THE M13 GENE V PROTEIN. A COMPARISON WITH THE CRYSTAL STRUCTURE
(-)
Pseudomonas phage Pf3 [TaxId: 10872] (1)
1PFSA:; B:SOLUTION NMR STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN OF THE FILAMENTOUS PSEUDOMONAS PHAGE PF3, MINIMIZED AVERAGE STRUCTURE
(-)
Protein domain: gp2.5 (1)
(-)
Bacteriophage T7 [TaxId: 10760] (1)
1JE5A:; B:CRYSTAL STRUCTURE OF GP2.5, A SINGLE-STRANDED DNA BINDING PROTEIN ENCODED BY BACTERIOPHAGE T7
(-)
Family: Single strand DNA-binding domain, SSB (96)
(-)
Protein domain: Archaeal ssDNA-binding protein (1)
(-)
Sulfolobus solfataricus [TaxId: 2287] (1)
1O7IA:; B:CRYSTAL STRUCTURE OF A SINGLE STRANDED DNA BINDING PROTEIN
(-)
Protein domain: automated matches (30)
(-)
Escherichia coli K-12 [TaxId: 83333] (3)
1WOCA:; B:; C:; D:CRYSTAL STRUCTURE OF PRIB
2CCZA:; B:CRYSTAL STRUCTURE OF E. COLI PRIMOSOMOL PROTEIN PRIB BOUND TO SSDNA
2PNHA:; B:ESCHERICHIA COLI PRIB E39A VARIANT
(-)
Human (Homo sapiens) [TaxId: 9606] (19)
2B29A:N-TERMINAL DOMAIN OF THE RPA70 SUBUNIT OF HUMAN REPLICATION PROTEIN A.
2B3GA:P53N (FRAGMENT 33-60) BOUND TO RPA70N
2DUDA:; B:CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL SINGLE-STRANDED DNA-BINDING PROTEIN(HMTSSB)
2PI2E:; F:; G:; H:FULL-LENGTH REPLICATION PROTEIN A SUBUNITS RPA14 AND RPA32
2PQAB:; D:CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN RPA 14/32 HETERODIMER
2Z6KC:; D:CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN RPA14/32 HETERODIMER
3KDFA:; B:; C:; D:X-RAY CRYSTAL STRUCTURE OF THE HUMAN REPLICATION PROTEIN A COMPLEX FROM WHEAT GERM CELL FREE EXPRESSION
4IJHA:FRAGMENT-BASED DISCOVERY OF PROTEIN-PROTEIN INTERACTION INHIBITORS OF REPLICATION PROTEIN A
4IJLA:FRAGMENT-BASED DISCOVERY OF PROTEIN-PROTEIN INTERACTION INHIBITORS OF REPLICATION PROTEIN A
4IPCA:STRUCTURE OF THE N-TERMINAL DOMAIN OF RPA70, E7R MUTANT
4IPDA:STRUCTURE OF THE N-TERMINAL DOMAIN OF RPA70, E100R MUTANT
4IPGA:STRUCTURE OF THE N-TERMINAL DOMAIN OF RPA70, E7R, E100R MUTANT
4IPHA:STRUCTURE OF N-TERMINAL DOMAIN OF RPA70 IN COMPLEX WITH VU079104 INHIBITOR
4LUOA:FRAGMENT-BASED DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN A PROTEIN-PROTEIN INTERACTIONS
4LUVA:FRAGMENT-BASED DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN A PROTEIN-PROTEIN INTERACTIONS
4LUZA:FRAGMENT-BASED DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN A PROTEIN-PROTEIN INTERACTIONS
4LW1A:FRAGMENT-BASED DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN A PROTEIN-PROTEIN INTERACTIONS
4LWCA:FRAGMENT-BASED DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN A PROTEIN-PROTEIN INTERACTIONS
4O0AA:FRAGMENT-BASED DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN A PROTEIN-PROTEIN INTERACTIONS
(-)
Klebsiella pneumoniae [TaxId: 573] (1)
4APVA:THE KLEBSIELLA PNEUMONIAE PRIMOSOMAL PRIB PROTEIN: IDENTIFICATION, CRYSTAL STRUCTURE, AND SSDNA BINDING MODE
(-)
Mycobacterium leprae [TaxId: 272631] (2)
3AFPA:; B:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN FROM MYCOBACTERIUM LEPRAE (FORM I)
3AFQA:; B:; C:; D:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN FROM MYCOBACTERIUM LEPRAE (FORM II)
(-)
Mycobacterium smegmatis [TaxId: 1772] (3)
1X3EA:; B:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING PROTEIN FROM MYCOBACTERIUM SMEGMATIS
1X3FA:; B:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING PROTEIN FROM MYCOBACTERIUM SMEGMATIS
1X3GA:; B:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING PROTEIN FROM MYCOBACTERIUM SMEGMATIS
(-)
Mycobacterium smegmatis [TaxId: 246196] (1)
3A5UA:; B:PROMISCUITY AND SPECIFICITY IN DNA BINDING TO SSB: INSIGHTS FROM THE STRUCTURE OF THE MYCOBACTERIUM SMEGMATIS SSB-SSDNA COMPLEX
(-)
Streptomyces coelicolor [TaxId: 1902] (1)
3EIVA:; B:; C:; D:CRYSTAL STRUCTURE OF SINGLE-STRANDED DNA-BINDING PROTEIN FROM STREPTOMYCES COELICOLOR
(-)
Protein domain: CDC13 ssDNA-binding domain (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1KXLA:SOLUTION STRUCTURE OF THE CDC13 DNA-BINDING DOMAIN IN A COMPLEX WITH SINGLE-STRANDED TELOMERIC DNA (DNA STRUCTURE NOT MODELED)
1S40A:SOLUTION STRUCTURE OF THE CDC13 DNA-BINDING DOMAIN COMPLEXED WITH A SINGLE-STRANDED TELOMERIC DNA 11-MER
(-)
Protein domain: Core domain of telomere end binding protein beta subunit (14)
(-)
Oxytricha nova [TaxId: 200597] (14)
1JB7B:DNA G-QUARTETS IN A 1.86 A RESOLUTION STRUCTURE OF AN OXYTRICHA NOVA TELOMERIC PROTEIN-DNA COMPLEX
1OTCB:THE O. NOVA TELOMERE END BINDING PROTEIN COMPLEXED WITH SINGLE STRAND DNA
1PA6B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG
1PH1B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGGGT
1PH2B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG
1PH3B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGTG
1PH4B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGCG
1PH5B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG(3DR)GG
1PH6B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGTGG
1PH7B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGIGG
1PH8B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGCGG
1PH9B:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG
1PHJB:CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GG(3DR) GTTTTGGGG
2I0QB:9-224CRYSTAL STRUCTURE OF A TELOMERE SINGLE-STRAND DNA-PROTEIN COMPLEX FROM O. NOVA WITH FULL-LENGTH ALPHA AND BETA TELOMERE PROTEINS
(-)
Protein domain: Hypothetical protein At4g28440 (F20O9.120) (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1WJJA:SOLUTION STRUCTURE OF HYPOTHETICAL PROTEIN F20O9.120 FROM ARABIDOPSIS THALIANA
(-)
Protein domain: OB-fold domains of BRCA2 (3)
(-)
Mouse (Mus musculus) [TaxId: 10090] (2)
1MIUA:2590-2722; A:2723-2751,A:2888-2970; A:2971-3103STRUCTURE OF A BRCA2-DSS1 COMPLEX
1MJEA:2590-2722; A:2723-2751,A:2888-2970; A:2971-3110STRUCTURE OF A BRCA2-DSS1-SSDNA COMPLEX
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1IYJB:2599-2731; B:2732-2760,B:2898-2979; B:2980-3117; D:2599-2731; D:2732-2760,D:2898-2979; D:2980-3117STRUCTURE OF A BRCA2-DSS1 COMPLEX
(-)
Protein domain: Primosomal replication protein N, PriB (2)
(-)
Escherichia coli [TaxId: 562] (2)
1TXYA:; B:E. COLI PRIB
1V1QA:; B:CRYSTAL STRUCTURE OF PRIB- A PRIMOSOMAL DNA REPLICATION PROTEIN OF ESCHERICHIA COLI
(-)
Protein domain: Protection of telomeres protein 1, Pot1 (3)
(-)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] (2)
1QZGA:; B:CRYSTAL STRUCTURE OF POT1 (PROTECTION OF TELOMERE)- SSDNA COMPLEX
1QZHA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF POT1 (PROTECTION OF TELOMERE)- SSDNA COMPLEX
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1XJVA:6-145; A:149-299CRYSTAL STRUCTURE OF HUMAN POT1 BOUND TO TELOMERIC SINGLE-STRANDED DNA (TTAGGGTTAG)
(-)
Protein domain: Replication protein A 14 KDa (RPA14) subunit (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1L1OA:; D:STRUCTURE OF THE HUMAN REPLICATION PROTEIN A (RPA) TRIMERIZATION CORE
1QUQB:; D:COMPLEX OF REPLICATION PROTEIN A SUBUNITS RPA14 AND RPA32
(-)
Protein domain: Replication protein A 32 KDa subunit (RPA32) fragment (5)
(-)
Human (Homo sapiens) [TaxId: 9606] (5)
1L1OB:; E:STRUCTURE OF THE HUMAN REPLICATION PROTEIN A (RPA) TRIMERIZATION CORE
1QUQA:; C:COMPLEX OF REPLICATION PROTEIN A SUBUNITS RPA14 AND RPA32
2PI2A:; B:; C:; D:FULL-LENGTH REPLICATION PROTEIN A SUBUNITS RPA14 AND RPA32
2PQAA:; C:CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN RPA 14/32 HETERODIMER
2Z6KA:; B:CRYSTAL STRUCTURE OF FULL-LENGTH HUMAN RPA14/32 HETERODIMER
(-)
Protein domain: Replication protein A 70 KDa subunit (RPA70) (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (4)
1EWIA:HUMAN REPLICATION PROTEIN A: GLOBAL FOLD OF THE N-TERMINAL RPA-70 DOMAIN REVEALS A BASIC CLEFT AND FLEXIBLE C-TERMINAL LINKER
1FGUA:181-298; A:299-426; B:181-289; B:298-426SSDNA-BINDING DOMAIN OF THE LARGE SUBUNIT OF REPLICATION PROTEIN A
1JMCA:183-298; A:299-420SINGLE STRANDED DNA-BINDING DOMAIN OF HUMAN REPLICATION PROTEIN A BOUND TO SINGLE STRANDED DNA, RPA70 SUBUNIT, RESIDUES 183-420
1L1OC:; F:STRUCTURE OF THE HUMAN REPLICATION PROTEIN A (RPA) TRIMERIZATION CORE
(-)
Protein domain: ssDNA-binding protein (13)
(-)
Deinococcus radiodurans [TaxId: 1299] (1)
1SE8A:STRUCTURE OF SINGLE-STRANDED DNA-BINDING PROTEIN (SSB) FROM D. RADIODURANS
(-)
Escherichia coli [TaxId: 562] (6)
1EQQA:; B:; C:; D:SINGLE STRANDED DNA BINDING PROTEIN AND SSDNA COMPLEX
1EYGA:; B:; C:; D:CRYSTAL STRUCTURE OF CHYMOTRYPTIC FRAGMENT OF E. COLI SSB BOUND TO TWO 35-MER SINGLE STRAND DNAS
1KAWA:; C:; D:; B:STRUCTURE OF SINGLE STRANDED DNA BINDING PROTEIN (SSB)
1QVCA:; B:; C:; D:CRYSTAL STRUCTURE ANALYSIS OF SINGLE STRANDED DNA BINDING PROTEIN (SSB) FROM E.COLI
1SRUA:; B:; C:; D:CRYSTAL STRUCTURE OF FULL LENGTH E. COLI SSB PROTEIN
4MZ9A:; B:; C:; D:REVISED STRUCTURE OF E. COLI SSB
(-)
Human (Homo sapiens), mitochondria [TaxId: 9606] (2)
1S3OA:; B:HUMAN MITOCHONDRIAL SINGLE STRAND DNA BINDING PROTEIN (HMSSB)
3ULLA:; B:HUMAN MITOCHONDRIAL SINGLE-STRANDED DNA BINDING PROTEIN
(-)
Mycobacterium tuberculosis [TaxId: 1773] (4)
1UE1A:; B:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS
1UE5A:; B:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS
1UE6A:; B:; C:; D:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS
1UE7A:; C:; D:; B:CRYSTAL STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS
(-)
Protein domain: Telomere end binding protein alpha subunit (16)
(-)
Oxytricha nova [TaxId: 200597] (16)
1JB7A:36-204; A:205-328; A:329-495DNA G-QUARTETS IN A 1.86 A RESOLUTION STRUCTURE OF AN OXYTRICHA NOVA TELOMERIC PROTEIN-DNA COMPLEX
1K8GA:36-204; A:205-315; B:36-204; B:205-316; C:36-204; C:205-316CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF OXYTRICHA NOVA TELOMERE END BINDING PROTEIN ALPHA SUBUNIT BOTH UNCOMPLEXED AND COMPLEXED WITH TELOMERIC SSDNA
1KIXA:36-204; A:205-318; A:329-495DIMERIC STRUCTURE OF THE O. NOVA TELOMERE END BINDING PROTEIN ALPHA SUBUNIT WITH BOUND SSDNA
1OTCA:37-204; A:205-328; A:329-495THE O. NOVA TELOMERE END BINDING PROTEIN COMPLEXED WITH SINGLE STRAND DNA
1PA6A:36-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG
1PH1A:35-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGGGT
1PH2A:36-204; A:205-328; A:329-494CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG
1PH3A:36-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGTG
1PH4A:36-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGCG
1PH5A:36-204; A:205-328; A:329-494CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG(3DR)GG
1PH6A:35-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGTGG
1PH7A:36-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGIGG
1PH8A:36-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGCGG
1PH9A:36-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG
1PHJA:35-204; A:205-328; A:329-492CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GG(3DR) GTTTTGGGG
2I0QA:35-204; A:205-328; A:329-495CRYSTAL STRUCTURE OF A TELOMERE SINGLE-STRAND DNA-PROTEIN COMPLEX FROM O. NOVA WITH FULL-LENGTH ALPHA AND BETA TELOMERE PROTEINS
(-)
Fold: SH3-like barrel (1035)
(-)
Superfamily: Chromo domain-like (82)
(-)
Family: Histone-like proteins from archaea (26)
(-)
Protein domain: DNA-binding protein (15)
(-)
Sulfolobus acidocaldarius, Sac7d [TaxId: 2285] (8)
1AZPA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
1AZQA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
1BNZA:SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX
1CA5A:INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
1CA6A:INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
1SAPA:HYPERTHERMOPHILE PROTEIN, RELAXATION MATRIX REFINEMENT STRUCTURE
1WD0A:CRYSTAL STRUCTURES OF THE HYPERTHERMOPHILIC CHROMOSOMAL PROTEIN SAC7D IN COMPLEX WITH DNA DECAMERS
1WD1A:CRYSTAL STRUCTURES OF THE HYPERTHERMOPHILIC CHROMOSOMAL PROTEIN SAC7D IN COMPLEX WITH DNA DECAMERS
(-)
Sulfolobus solfataricus, Sso7d [TaxId: 2287] (7)
1B4OA:NMR STUDY OF SSO7D MUTANT (F31A) MINIMIZED AVERAGE STRUCTURE
1BBXC:; D:NON-SPECIFIC PROTEIN-DNA INTERACTIONS IN THE SSO7D-DNA COMPLEX, NMR, 1 STRUCTURE
1BF4A:CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX
1C8CA:CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS
1JICA:SOLUTION NMR STRUCTURE OF RECOMBINANT SSO7D WITH RNASE ACTIVITY, MINIMIZED AVERAGE STRUCTURE
1SSOA:SOLUTION STRUCTURE AND DNA-BINDING PROPERTIES OF A THERMOSTABLE PROTEIN FROM THE ARCHAEON SULFOLOBUS SOLFATARICUS
2CVRA:NMR SOLUTION STRUCTURE OF SSO7D MUTANT, K12L, 12 CONFORMERS
(-)
Superfamily: DNA-binding domain of retroviral integrase (9)
(-)
Family: automated matches (2)
(-)
Protein domain: automated matches (2)
(-)
Rous sarcoma virus [TaxId: 11888] (2)
4FW1A:217-269; B:217-269CRYSTAL STRUCTURE OF TWO-DOMAIN RSV INTEGRASE COVALENTLY LINKED WITH DNA
4FW2A:217-269; B:217-268CRYSTAL STRUCTURE OF RSV THREE-DOMAIN INTEGRASE WITH DISORDERED N-TERMINAL DOMAIN
(-)
Family: DNA-binding domain of retroviral integrase (7)
(-)
Protein domain: DNA-binding domain of retroviral integrase (7)
(-)
Human immunodeficiency virus type 1 [TaxId: 11676] (4)
1EX4A:223-270; B:223-270HIV-1 INTEGRASE CATALYTIC CORE AND C-TERMINAL DOMAIN
1IHVA:; B:SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF HIV-1 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE
1IHWA:; B:SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF HIV-1 INTEGRASE, NMR, 40 STRUCTURES
1QMCA:; B:C-TERMINAL DNA-BINDING DOMAIN OF HIV-1 INTEGRASE, NMR, 42 STRUCTURES
(-)
Rous sarcoma virus RSV [TaxId: 11886] (2)
1C0MA:217-269; B:217-269; C:217-270; D:217-269CRYSTAL STRUCTURE OF RSV TWO-DOMAIN INTEGRASE
1C1AA:217-272; B:217-268CRYSTAL STRUCTURE OF RSV TWO-DOMAIN INTEGRASE
(-)
Simian immunodeficiency virus [TaxId: 11723] (1)
1C6VX:SIV INTEGRASE (CATALYTIC DOMAIN + DNA BIDING DOMAIN COMPRISING RESIDUES 50-293) MUTANT WITH PHE 185 REPLACED BY HIS (F185H)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Fold: DNA-binding domain (16)
(-)
Superfamily: DNA-binding domain (16)
(-)
Family: automated matches (2)
(-)
Protein domain: automated matches (2)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (1)
2KY8A:SOLUTION STRUCTURE AND DYNAMIC ANALYSIS OF CHICKEN MBD2 METHYL BINDING DOMAIN BOUND TO A TARGET METHYLATED DNA SEQUENCE
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2MB7A:SOLUTION STRUCTURE OF MBD3 METHYLCYTOSINE BINDING DOMAIN
(-)
Family: DNA-binding domain from tn916 integrase (4)
(-)
Protein domain: DNA-binding domain from tn916 integrase (4)
(-)
Enterococcus faecalis [TaxId: 1351] (4)
1B69A:THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX
1BB8A:N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, 25 STRUCTURES
1TN9A:THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX
2BB8A:N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE
(-)
Family: GCC-box binding domain (3)
(-)
Protein domain: GCC-box binding domain (3)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (3)
1GCCA:SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE
2GCCA:SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
3GCCA:SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, 46 STRUCTURES
(-)
Family: lambda integrase N-terminal domain (3)
(-)
Protein domain: lambda integrase N-terminal domain (3)
(-)
Bacteriophage lambda [TaxId: 10710] (3)
1KJKA:SOLUTION STRUCTURE OF THE LAMBDA INTEGRASE AMINO-TERMINAL DOMAIN
1Z1BA:11-59; B:11-59CRYSTAL STRUCTURE OF A LAMBDA INTEGRASE DIMER BOUND TO A COC' CORE SITE
1Z1GA:11-59; B:11-59; C:11-59; D:11-59CRYSTAL STRUCTURE OF A LAMBDA INTEGRASE TETRAMER BOUND TO A HOLLIDAY JUNCTION
(-)
Family: Methyl-CpG-binding domain, MBD (4)
(-)
Protein domain: Methyl-CpG-binding protein 2, MECP2 (2)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (1)
1UB1A:SOLUTION STRUCTURE OF THE MATRIX ATTACHMENT REGION-BINDING DOMAIN OF CHICKEN MECP2
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1QK9A:THE SOLUTION STRUCTURE OF THE DOMAIN FROM MECP2 THAT BINDS TO METHYLATED DNA
(-)
Protein domain: Methylation-dependent transcriptional repressor MBD1/PCM1 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1D9NA:SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF THE METHYLATION-DEPENDENT TRANSCRIPTIONAL REPRESSOR MBD1/PCM1
1IG4A:SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF HUMAN MBD1 IN COMPLEX WITH METHYLATED DNA
(-)
Fold: DNA-binding domain of intron-encoded endonucleases (3)
(-)
Superfamily: DNA-binding domain of intron-encoded endonucleases (3)
(-)
Family: DNA-binding domain of intron-encoded endonucleases (3)
(-)
Protein domain: DNA-binding domain of intron endonuclease I-TevI (2)
(-)
Bacteriophage T4 [TaxId: 10665] (2)
1I3JA:CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF INTRON ENDONUCLEASE I-TEVI WITH ITS SUBSTRATE
1T2TA:CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF INTRON ENDONUCLEASE I-TEVI WITH OPERATOR SITE
(-)
Protein domain: Intron-encoded homing endonuclease I-HmuI (1)
(-)
Bacteriophage SPO1 [TaxId: 10685] (1)
1U3EM:106-174DNA BINDING AND CLEAVAGE BY THE HNH HOMING ENDONUCLEASE I-HMUI
(-)
Fold: DNA-binding domain of Mlu1-box binding protein MBP1 (3)
(-)
Superfamily: DNA-binding domain of Mlu1-box binding protein MBP1 (3)
(-)
Family: DNA-binding domain of Mlu1-box binding protein MBP1 (3)
(-)
Protein domain: DNA-binding domain of Mlu1-box binding protein MBP1 (3)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (3)
1BM8A:DNA-BINDING DOMAIN OF MBP1
1L3GA:NMR STRUCTURE OF THE DNA-BINDING DOMAIN OF CELL CYCLE PROTEIN, MBP1(2-124) FROM SACCHAROMYCES CEREVISIAE
1MB1A:MBP1 FROM SACCHAROMYCES CEREVISIAE
(-)
Fold: DNA-binding protein Tfx (1)
(-)
Superfamily: DNA-binding protein Tfx (1)
(-)
Family: DNA-binding protein Tfx (1)
(-)
Protein domain: DNA-binding protein Tfx (1)
(-)
Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
1NR3A:SOLUTION STRUCTURE OF THE PROTEIN MTH0916: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT212
(-)
Fold: Ferredoxin-like (1795)
(-)
Superfamily: RNA-binding domain, RBD (289)
(-)
Family: Canonical RBD (214)
(-)
Protein domain: TAR DNA-binding protein 43, TDP-43 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1WF0A:SOLUTION STRUCTURE OF RRM DOMAIN IN TAR DNA-BINDING PROTEIN-43
2CQGA:96-185SOLUTION STRUCTURE OF THE RNA BINDING DOMAIN OF TAR DNA-BINDING PROTEIN-43
(-)
Superfamily: Viral DNA-binding domain (18)
(-)
Family: Viral DNA-binding domain (18)
(-)
Protein domain: Epstein barr virus nuclear antigen-1 (ebna1) (2)
(-)
Epstein-Barr virus [TaxId: 10376] (2)
1B3TA:; B:EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX
1VHIA:; B:EPSTEIN BARR VIRUS NUCLEAR ANTIGEN-1 DNA-BINDING DOMAIN, RESIDUES 470-607
(-)
Protein domain: Papillomavirus-1 E2 protein (16)
(-)
Bovine papillomavirus type 1 [TaxId: 10559] (3)
1DBDA:; B:E2 DNA-BINDING DOMAIN FROM PAPILLOMAVIRUS BPV-1
1JJHA:; B:; C:E2 DNA-BINDING DOMAIN FROM BOVINE PAPILLOMAVIRUS TYPE 1
2BOPA:CRYSTAL STRUCTURE AT 1.7 ANGSTROMS OF THE BOVINE PAPILLOMAVIRUS-1 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET
(-)
Human papillomavirus type 16 [TaxId: 333760] (5)
1BY9A:CRYSTAL STRUCTURE OF THE E2 DNA-BINDING DOMAIN FROM HUMAN PAPILLOMAVIRUS TYPE-16: IMPLICATIONS FOR ITS DNA BINDING-SITE SELECTION MECHANISM
1R8PA:; B:HPV-16 E2C SOLUTION STRUCTURE
1ZZFA:; B:THE DNA-BOUND SOLUTION STRUCTURE OF HPV-16 E2 DNA-BINDING DOMAIN
2Q79A:CRYSTAL STRUCTURE OF SINGLE CHAIN E2C FROM HPV16 WITH A 12AA LINKER FOR MONOMERIZATION.
3MI7X:AN ENHANCED REPRESSOR OF HUMAN PAPILLOMAVIRUS E2 PROTEIN
(-)
Human papillomavirus type 18 [TaxId: 333761] (2)
1F9FA:; B:; C:; D:CRYSTAL STRUCTURE OF THE HPV-18 E2 DNA-BINDING DOMAIN
1JJ4A:; B:HUMAN PAPILLOMAVIRUS TYPE 18 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET
(-)
Human papillomavirus type 31 [TaxId: 10585] (2)
1A7GE:THE CRYSTAL STRUCTURE OF THE E2 DNA-BINDING DOMAIN FROM HUMAN PAPILLOMAVIRUS AT 2.4 ANGSTROMS
1DHMA:; B:DNA-BINDING DOMAIN OF E2 FROM HUMAN PAPILLOMAVIRUS-31, NMR, MINIMIZED AVERAGE STRUCTURE
(-)
Human papillomavirus type 6a [TaxId: 37122] (4)
1R8HA:; B:; C:; D:; E:; F:COMPARISON OF THE STRUCTURE AND DNA BINDING PROPERTIES OF THE E2 PROTEINS FROM AN ONCOGENIC AND A NON-ONCOGENIC HUMAN PAPILLOMAVIRUS
2AYBA:281-366; B:281-366CRYSTAL STRUCTURE OF HPV6A E2 DNA BINDING DOMAIN BOUND TO A 16 BASE PAIR DNA TARGET
2AYEA:; E:; F:; B:; C:; D:CRYSTAL STRUCTURE OF THE UNLIGANDED E2 DNA BINDING DOMAIN FROM HPV6A
2AYGA:; B:CRYSTAL STRUCTURE OF HPV6A E2 DNA BINDING DOMAIN BOUND TO AN 18 BASE PAIR DNA TARGET
(-)
Fold: GYF/BRK domain-like (9)
(-)
Superfamily: BRK domain-like (5)
(-)
Family: BRK domain-like (5)
(-)
Protein domain: Chromodomain-helicase-DNA-binding protein 7, CHD7 (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
2CKCA:2563-2622SOLUTION STRUCTURES OF THE BRK DOMAINS OF THE HUMAN CHROMO HELICASE DOMAIN 7 AND 8, REVEALS STRUCTURAL SIMILARITY WITH GYF DOMAIN SUGGESTING A ROLE IN PROTEIN INTERACTION
2V0EA:2560-2614BRK DOMAIN FROM HUMAN CHD7
2V0FA:2629-2715BRK DOMAIN FROM HUMAN CHD7
(-)
Protein domain: Chromodomain-helicase-dna-binding protein 8, CHD8 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
2CKAA:2028-2085SOLUTION STRUCTURES OF THE BRK DOMAINS OF THE HUMAN CHROMO HELICASE DOMAIN 7 AND 8, REVEALS STRUCTURAL SIMILARITY WITH GYF DOMAIN SUGGESTING A ROLE IN PROTEIN INTERACTION
2DL6A:8-77SOLUTION STRUCTURE OF THE FIRST BRK DOMAIN FROM HUMAN CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 8
(-)
Fold: IF3-like (127)
(-)
Superfamily: AlbA-like (17)
(-)
Family: DNA-binding protein AlbA (13)
(-)
Protein domain: automated matches (5)
(-)
Methanothermobacter thermautotrophicus [TaxId: 187420] (1)
3TOEA:; B:STRUCTURE OF MTH10B
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
2Z7CA:; B:; C:; D:CRYSTAL STRUCTURE OF CHROMATIN PROTEIN ALBA FROM HYPERTHERMOPHILIC ARCHAEON PYROCOCCUS HORIKOSHII
(-)
Sulfolobus shibatae [TaxId: 2286] (2)
1Y9XA:; B:SOLUTION STRUCTURE OF ARCHAEON DNA-BINDING PROTEIN SSH10B
3WBMA:; B:; C:; D:CRYSTAL STRUCTURE OF PROTEIN-RNA COMPLEX
(-)
Sulfolobus solfataricus [TaxId: 273057] (1)
2BKYA:; B:CRYSTAL STRUCTURE OF THE ALBA1:ALBA2 HETERODIMER FROM SULFOLOBUS SOLFATARICUS
(-)
Protein domain: DNA-binding protein AlbA (8)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (2)
1NFHA:; B:STRUCTURE OF A SIR2 SUBSTRATE, ALBA, REVEALS A MECHANISM FOR DEACTYLATION-INDUCED ENHANCEMENT OF DNA-BINDING
1NFJA:STRUCTURE OF A SIR2 SUBSTRATE, ALBA, REVEALS A MECHANISM FOR DEACTYLATION-INDUCED ENHANCEMENT OF DNA-BINDING
(-)
Methanococcus jannaschii [TaxId: 2190] (1)
1NH9A:CRYSTAL STRUCTURE OF A DNA BINDING PROTEIN MJA10B FROM THE HYPERTHERMOPHILE METHANOCOCCUS JANNASCHII
(-)
Sulfolobus solfataricus, Sso10b1 [TaxId: 2287] (2)
1H0XA:; B:STRUCTURE OF ALBA: AN ARCHAEAL CHROMATIN PROTEIN MODULATED BY ACETYLATION
1H0YA:STRUCTURE OF ALBA: AN ARCHAEAL CHROMATIN PROTEIN MODULATED BY ACETYLATION
(-)
Sulfolobus solfataricus, Sso10b2 [TaxId: 2287] (3)
1UDVA:; B:CRYSTAL STRUCTURE OF THE HYPERTHERMOPHILIC ARCHAEAL DNA-BINDING PROTEIN SSO10B2 AT 1.85 A
2A2YA:; B:NMR STRUCTUE OF SSO10B2 FROM SULFOLOBUS SOLFATARICUS
2BKYX:; Y:CRYSTAL STRUCTURE OF THE ALBA1:ALBA2 HETERODIMER FROM SULFOLOBUS SOLFATARICUS
(-)
Fold: MotA C-terminal domain-like (1)
(-)
Superfamily: DNA-binding C-terminal domain of the transcription factor MotA (1)
(-)
Family: DNA-binding C-terminal domain of the transcription factor MotA (1)
(-)
Protein domain: DNA-binding C-terminal domain of the transcription factor MotA (1)
(-)
Bacteriophage T4 [TaxId: 10665] (1)
1KAFA:; B:; C:; D:; E:; F:DNA BINDING DOMAIN OF THE PHAGE T4 TRANSCRIPTION FACTOR MOTA (AA105-211)
(-)
Fold: Origin of replication-binding domain, RBD-like (33)
(-)
Superfamily: Origin of replication-binding domain, RBD-like (33)
(-)
Family: DNA-binding domain of REP protein (2)
(-)
Protein domain: DNA-binding domain of REP protein (2)
(-)
Geminivirus (Tomato yellow leaf curl virus - sardinia) [TaxId: 123735] (2)
1L2MA:MINIMIZED AVERAGE STRUCTURE OF THE N-TERMINAL, DNA-BINDING DOMAIN OF THE REPLICATION INITIATION PROTEIN FROM A GEMINIVIRUS (TOMATO YELLOW LEAF CURL VIRUS-SARDINIA)
1L5IA:30-CONFORMER NMR ENSEMBLE OF THE N-TERMINAL, DNA-BINDING DOMAIN OF THE REPLICATION INITIATION PROTEIN FROM A GEMINIVIRUS (TOMATO YELLOW LEAF CURL VIRUS-SARDINIA)
(-)
Family: The origin DNA-binding domain of SV40 T-antigen (15)
(-)
Protein domain: automated matches (1)
(-)
Simian virus 40 [TaxId: 10633] (1)
3QN2A:STRUCTURE-BASED DESIGN OF A DISULFIDE-LINKED OLIGOMERIC FORM OF THE SIMIAN VIRUS 40 (SV40) LARGE T ANTIGEN DNA BINDING DOMAIN
(-)
Protein domain: The origin DNA-binding domain of SV40 T-antigen (14)
(-)
Jc polyomavirus [TaxId: 10632] (3)
4LIFA:CRYSTAL STRUCTURE OF THE JCV LARGE T-ANTIGEN ORIGIN BINDING DOMAIN
4LMDA:; B:CRYSTAL STRUCTURE OF THE JCV LARGE T-ANTIGEN ORIGIN BINDING DOMAIN
4NBPA:CRYSTAL STRUCTURE OF THE JCV LARGE T-ANTIGEN ORIGIN BINDING DOMAIN
(-)
Simian virus 40, Sv40 [TaxId: 10633] (11)
1TBDA:SOLUTION STRUCTURE OF THE ORIGIN DNA BINDING DOMAIN OF SV40 T-ANTIGEN, NMR, MINIMIZED AVERAGE STRUCTURE
1Z1DB:1-131STRUCTURAL MODEL FOR THE INTERACTION BETWEEN RPA32 C-TERMINAL DOMAIN AND SV40 T ANTIGEN ORIGIN BINDING DOMAIN.
2FUFA:CRYSTAL STRUCTURE OF THE SV40 LARGE T ANTIGEN ORIGIN-BINDING DOMAIN
2IF9A:; B:CRYSTAL STRUCTURE OF SV40 T-ANTIGEN ORIGIN BINDING DOMAIN DISULFIDE-LINKED DIMER
2IPRA:; B:ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN (RESIDUES 131-259). P21 CRYSTAL FORM
2ITJA:; B:ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN (RESIDUES 131-259). P212121 CRYSTAL FORM
2ITLA:; B:THE ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN BOUND TO THE FUNCTIONAL PEN PALINDROME DNA (23 BP)
2NL8A:THE ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN BOUND NON SPECIFICALLY TO A 17 BP PALINDROME DNA (SITES 1 AND 3)
2NTCA:; B:CRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN ORIGIN BINDING DOMAIN WITH DNA
2TBDA:SV40 T ANTIGEN DNA-BINDING DOMAIN, NMR, 30 STRUCTURES
3QK2A:STRUCTURE-BASED ANALYSIS OF THE INTERACTION BETWEEN THE SIMIAN VIRUS 40 T-ANTIGEN ORIGIN BINDING DOMAIN AND SINGLE-STRANDED DNA
(-)
Fold: POZ domain (79)
(-)
Superfamily: POZ domain (79)
(-)
Family: BTB/POZ domain (43)
(-)
Protein domain: Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1NEXA:4-103; C:4-103CRYSTAL STRUCTURE OF SCSKP1-SCCDC4-CPD PEPTIDE COMPLEX
3MKSA:4-103; C:4-103CRYSTAL STRUCTURE OF YEAST CDC4/SKP1 IN COMPLEX WITH AN ALLOSTERIC INHIBITOR SCF-I2
(-)
Fold: Replication modulator SeqA, C-terminal DNA-binding domain (4)
(-)
Superfamily: Replication modulator SeqA, C-terminal DNA-binding domain (4)
(-)
Family: Replication modulator SeqA, C-terminal DNA-binding domain (4)
(-)
Protein domain: automated matches (1)
(-)
Vibrio cholerae [TaxId: 417399] (1)
3SK7A:; B:CRYSTAL STRUCTURE OF V. CHOLERAE SEQA
(-)
Protein domain: Replication modulator SeqA, C-terminal DNA-binding domain (3)
(-)
Escherichia coli [TaxId: 562] (3)
1IU3C:; F:CRYSTAL STRUCTURE OF THE E.COLI SEQA PROTEIN COMPLEXED WITH HEMIMETHYLATED DNA
1J3EA:CRYSTAL STRUCTURE OF THE E.COLI SEQA PROTEIN COMPLEXED WITH N6-METHYLADENINE- GUANINE MISMATCH DNA
1LRRA:; D:CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA
(-)
Fold: ssDNA-binding transcriptional regulator domain (23)
(-)
Superfamily: ssDNA-binding transcriptional regulator domain (23)
(-)
Family: automated matches (10)
(-)
Protein domain: automated matches (10)
(-)
Magnaporthe oryzae [TaxId: 318829] (1)
4AGHA:STRUCTURAL FEATURES OF SSDNA BINDING PROTEIN MOSUB1 FROM MAGNAPORTHE ORYZAE
(-)
Potato (Solanum tuberosum) [TaxId: 4113] (8)
3N1HA:CRYSTAL STRUCTURE OF STWHY2
3N1IA:CRYSTAL STRUCTURE OF A STWHY2-ERE32 COMPLEX
3N1JA:CRYSTAL STRUCTURE OF A STWHY2-DT32 COMPLEX
3N1KA:CRYSTAL STRUCTURE OF A STWHY2-CERE32 COMPLEX
3N1LA:CRYSTAL STRUCTURE OF A STWHY2-RCERE32 COMPLEX
3R9YA:CRYSTAL STRUCTURE OF STWHY2 K67A (FORM I)
3R9ZA:CRYSTAL STRUCTURE OF STWHY2 K67A (FORM II)
3RA0A:CRYSTAL STRUCTURE OF A STWHY2 K67A-DT32 COMPLEX
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
4KOPA:; B:; C:; D:CRYSTAL STRUCTURE OF WHY2 FROM ARABIDOPSIS THALIANA
(-)
Family: Guide RNA binding protein gBP (5)
(-)
Protein domain: GBP21 (3)
(-)
Trypanosome (Trypanosoma brucei) [TaxId: 5691] (3)
2GIAB:28-173; D:CRYSTAL STRUCTURES OF TRYPANOSOMA BRUCIEI MRP1/MRP2
2GIDB:28-173; D:28-173; J:28-173; K:28-173CRYSTAL STRUCTURES OF TRYPANOSOMA BRUCIEI MRP1/MRP2
2GJED:28-173STRUCTURE OF A GUIDERNA-BINDING PROTEIN COMPLEX BOUND TO A GRNA
(-)
Protein domain: Guide RNA binding protein gBP25 (2)
(-)
Trypanosome (Trypanosoma brucei) [TaxId: 5691] (2)
2GIAA:56-221; G:CRYSTAL STRUCTURES OF TRYPANOSOMA BRUCIEI MRP1/MRP2
2GIDA:60-221; G:59-221; H:59-221; P:59-221CRYSTAL STRUCTURES OF TRYPANOSOMA BRUCIEI MRP1/MRP2
(-)
Family: Plant transcriptional regulator PBF-2 (3)
(-)
Protein domain: automated matches (2)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (2)
4KOOA:; B:; C:; D:CRYSTAL STRUCTURE OF WHY1 FROM ARABIDOPSIS THALIANA
4KOQA:CRYSTAL STRUCTURE OF WHY3 FROM ARABIDOPSIS THALIANA
(-)
Protein domain: Plant transcriptional regulator PBF-2 (1)
(-)
Potato (Solanum tuberosum) [TaxId: 4113] (1)
1L3AA:; B:; C:; D:STRUCTURE OF THE PLANT TRANSCRIPTIONAL REGULATOR PBF-2
(-)
Family: PMN2A0962/syc2379c-like (2)
(-)
Protein domain: Hypothetical protein PMN2A_0962 (1)
(-)
Prochlorococcus marinus [TaxId: 1219] (1)
2IT9A:1-122; B:; C:; D:CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF155 FAMILY (YP_292156.1) FROM PROCHLOROCOCCUS SP. NATL2A AT 1.80 A RESOLUTION
(-)
Protein domain: Hypothetical protein syc2379_c (1)
(-)
Synechococcus elongatus PCC 7942 [TaxId: 1140] (1)
2NVNA:1-121CRYSTAL STRUCTURE OF A PROTEIN WITH A CUPIN-LIKE FOLD AND UNKNOWN FUNCTION (YP_400729.1) FROM SYNECHOCOCCUS SP. PCC 7942 (ELONGATUS) AT 2.50 A RESOLUTION
(-)
Family: Transcriptional coactivator PC4 C-terminal domain (3)
(-)
Protein domain: Transcriptional coactivator PC4 C-terminal domain (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1PCFA:; B:; C:; D:; E:; F:; G:; H:HUMAN TRANSCRIPTIONAL COACTIVATOR PC4 C-TERMINAL DOMAIN
2C62A:; B:CRYSTAL STRUCTURE OF THE HUMAN TRANSCRIPTION COFACTOR PC4 IN COMPLEX WITH SINGLE-STRANDED DNA
2PHEA:61-126; B:61-126MODEL FOR VP16 BINDING TO PC4
(-)
Class: Alpha and beta proteins (a/b) (23833)
(-)
Fold: BRCT domain (29)
(-)
Superfamily: BRCT domain (29)
(-)
Family: DNA topoisomerase II binding protein 1, TopBP1 (1)
(-)
Protein domain: DNA topoisomerase II binding protein 1, TopBP1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WF6A:THE THIRD BRCA1 C-TERMINUS (BRCT) DOMAIN OF SIMILAR TO S.POMBE RAD4+/CUT5+ PRODUCT
(-)
Fold: Flavodoxin-like (1057)
(-)
Superfamily: CheY-like (258)
(-)
Family: CheY-related (166)
(-)
Protein domain: DNA-binding response regulator MicA, N-terminal domain (11)
(-)
Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313] (11)
1NXOA:MICAREC PH7.0
1NXPA:MICAREC PH4.5
1NXSA:MICAREC PH4.9
1NXTA:MICAREC PH 4.0
1NXVA:MICAREC PH 4.2
1NXWA:MICAREC PH 5.1
1NXXA:MICAREC PH 5.5
2A9OA:CRYSTAL STRUCTURES OF AN ACTIVATED YYCF HOMOLOGUE, THE ESSENTIAL RESPONSE REGULATOR FROM S.PNEUMONIAE IN COMPLEX WITH BEF3 AND THE EFFECT OF PH ON BEF3 BINDING, POSSIBLE PHOSPHATE IN THE ACTIVE SITE
2A9PA:MEDIUM RESOLUTION BEF3 BOUND RR02-REC
2A9QA:LOW RESOLUTION STRUCTURE RR02-REC ON BEF3 BOUND
2A9RA:RR02-REC PHOSPHATE IN THE ACTIVE SITE
(-)
Class: Multi-domain proteins (alpha and beta) (2421)
(-)
Fold: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment (16)
(-)
Superfamily: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment (16)
(-)
Family: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment (16)
(-)
Protein domain: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment (16)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1OISA:YEAST DNA TOPOISOMERASE I, N-TERMINAL FRAGMENT
(-)
Human (Homo sapiens) [TaxId: 9606] (15)
1A31A:215-430HUMAN RECONSTITUTED DNA TOPOISOMERASE I IN COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
1A35A:215-430HUMAN TOPOISOMERASE I/DNA COMPLEX
1A36A:215-430TOPOISOMERASE I/DNA COMPLEX
1EJ9A:203-430CRYSTAL STRUCTURE OF HUMAN TOPOISOMERASE I DNA COMPLEX
1K4SA:201-430HUMAN DNA TOPOISOMERASE I IN COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
1K4TA:201-430HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE POISON TOPOTECAN AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
1LPQA:202-430HUMAN DNA TOPOISOMERASE I (70 KDA) IN NON-COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX CONTAINING AN 8-OXOG LESION
1NH3A:203-430HUMAN TOPOISOMERASE I ARA-C COMPLEX
1R49A:202-430HUMAN TOPOISOMERASE I (TOPO70) DOUBLE MUTANT K532R/Y723F
1RR8C:201-430STRUCTURAL MECHANISMS OF CAMPTOTHECIN RESISTANCE BY MUTATIONS IN HUMAN TOPOISOMERASE I
1RRJA:201-430STRUCTURAL MECHANISMS OF CAMPTOTHECIN RESISTANCE BY MUTATIONS IN HUMAN TOPOISOMERASE I
1SC7A:201-430HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE INDENOISOQUINOLINE MJ-II-38 AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
1SEUA:201-430HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE INDOLOCARBAZOLE SA315F AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
1T8IA:201-430HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE POISON CAMPTOTHECIN AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
1TL8A:201-430HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE INDENOISOQUINOLINE AI-III-52 AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
(-)
Fold: Viral ssDNA binding protein (1)
(-)
Superfamily: Viral ssDNA binding protein (1)
(-)
Family: Viral ssDNA binding protein (1)
(-)
Protein domain: Infected cell protein 8, ICP8 (1)
(-)
Herpes simplex virus 1 [TaxId: 10298] (1)
1URJA:; B:SINGLE STRANDED DNA-BINDING PROTEIN(ICP8) FROM HERPES SIMPLEX VIRUS-1
(-)
Class: Peptides (792)
(-)
Fold: DNA-binding domains of HMG-I(Y) (4)
(-)
Superfamily: DNA-binding domains of HMG-I(Y) (4)
(-)
Family: DNA-binding domains of HMG-I(Y) (4)
(-)
Protein domain: DNA-binding domains of HMG-I(Y) (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (4)
2EZDA:SOLUTION STRUCTURE OF A COMPLEX OF THE SECOND DNA BINDING DOMAIN OF HUMAN HMG-I(Y) BOUND TO DNA DODECAMER CONTAINING THE PRDII SITE OF THE INTERFERON-BETA PROMOTER, NMR, MINIMIZED AVERAGE STRUCTURE
2EZEA:SOLUTION STRUCTURE OF A COMPLEX OF THE SECOND DNA BINDING DOMAIN OF HUMAN HMG-I(Y) BOUND TO DNA DODECAMER CONTAINING THE PRDII SITE OF THE INTERFERON-BETA PROMOTER, NMR, 35 STRUCTURES
2EZFA:SOLUTION STRUCTURE OF A COMPLEX OF THE THIRD DNA BINDING DOMAIN OF HUMAN HMG-I(Y) BOUND TO DNA DODECAMER CONTAINING THE PRDII SITE OF THE INTERFERON-BETA PROMOTER, NMR, MINIMIZED AVERAGE STRUCTURE
2EZGA:SOLUTION STRUCTURE OF A COMPLEX OF THE THIRD DNA BINDING DOMAIN OF HUMAN HMG-I(Y) BOUND TO DNA DODECAMER CONTAINING THE PRDII SITE OF THE INTERFERON-BETA PROMOTER, NMR, 35 STRUCTURES
(-)
Class: Small proteins (3458)
(-)
Fold: Cysteine-rich DNA binding domain, (DM domain) (1)
(-)
Superfamily: Cysteine-rich DNA binding domain, (DM domain) (1)
(-)
Family: Cysteine-rich DNA binding domain, (DM domain) (1)
(-)
Protein domain: DM domain of Doublesex (dsx) (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1LPVA:DROSOPHILA MELANOGASTER DOUBLESEX (DSX), NMR, 18 STRUCTURES
(-)
Fold: Glucocorticoid receptor-like (DNA-binding domain) (292)
(-)
Superfamily: Glucocorticoid receptor-like (DNA-binding domain) (292)
(-)
Family: A20-like zinc finger (4)
(-)
Protein domain: RabGEF1 (Rabex-5), ubiquitin-binding domain (4)
(-)
Cow (Bos taurus) [TaxId: 9913] (2)
2FIDB:14-73CRYSTAL STRUCTURE OF A BOVINE RABEX-5 FRAGMENT COMPLEXED WITH UBIQUITIN
2FIFB:; D:; F:CRYSTAL STRUCTURE OF A BOVINE RABEX-5 FRAGMENT COMPLEXED WITH UBIQUITIN
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
2C7MA:18-75HUMAN RABEX-5 RESIDUES 1-74 IN COMPLEX WITH UBIQUITIN
2C7NA:18-73; C:17-73; G:17-71; I:17-74HUMAN RABEX-5 RESIDUES 1-74 IN COMPLEX WITH UBIQUITIN
(-)
Family: automated matches (14)
(-)
Protein domain: automated matches (14)
(-)
Bacillus anthracis [TaxId: 260799] (1)
2J9RA:143-193THYMIDINE KINASE FROM B. ANTHRACIS IN COMPLEX WITH DT.
(-)
Bacillus cereus [TaxId: 1396] (1)
2JA1A:143-191THYMIDINE KINASE FROM B. CEREUS WITH TTP BOUND AS PHOSPHATE DONOR.
(-)
Emericella nidulans [TaxId: 162425] (3)
2VUSI:; K:; L:; M:; N:; O:; P:; J:CRYSTAL STRUCTURE OF UNLIGANDED NMRA-AREA ZINC FINGER COMPLEX
2VUTI:; J:; K:; L:; M:; N:; O:; P:CRYSTAL STRUCTURE OF NAD-BOUND NMRA-AREA ZINC FINGER COMPLEX
2VUUI:; J:; K:; L:; M:; N:; O:; P:CRYSTAL STRUCTURE OF NADP-BOUND NMRA-AREA ZINC FINGER COMPLEX
(-)
Geobacillus stearothermophilus [TaxId: 1422] (1)
3JR5A:229-274MUTM LESION RECOGNITION CONTROL COMPLEX WITH N174C CROSSLINKING SITE
(-)
Human (Homo sapiens) [TaxId: 9606] (8)
1W4RA:151-191; B:151-191; C:151-191; D:151-191; E:151-191; F:151-191; G:151-191; H:151-191STRUCTURE OF A TYPE II THYMIDINE KINASE WITH BOUND DTTP
2A66A:HUMAN LIVER RECEPTOR HOMOLOGUE DNA-BINDING DOMAIN (HLRH-1 DBD) IN COMPLEX WITH DSDNA FROM THE HCYP7A1 PROMOTER
2EBLA:SOLUTION STRUCTURE OF THE ZINC FINGER, C4-TYPE DOMAIN OF HUMAN COUP TRANSCRIPTION FACTOR 1
2JTGA:SOLUTION STRUCTURE OF THE THAP-ZINC FINGER OF THAP1
2L1GA:RDC REFINED SOLUTION STRUCTURE OF THE THAP ZINC FINGER OF THAP1 IN COMPLEX WITH ITS 16BP RRM1 DNA TARGET
2O10A:7-35; A:36-66SOLUTION STRUCTURE OF THE N-TERMINAL LIM DOMAIN OF MLP/CRP3
2O13A:119-144; A:145-176SOLUTION STRUCTURE OF THE C-TERMINAL LIM DOMAIN OF MLP/CRP3
2WVJA:151-191; C:151-191; D:151-191; E:151-191; F:151-191; G:151-191; H:151-191; B:151-192MUTATION OF THR163 TO SER IN HUMAN THYMIDINE KINASE SHIFTS THE SPECIFICITY FROM THYMIDINE TOWARDS THE NUCLEOSIDE ANALOGUE AZIDOTHYMIDINE
(-)
Family: C-terminal, Zn-finger domain of MutM-like DNA repair proteins (41)
(-)
Protein domain: DNA repair protein MutM (Fpg) (32)
(-)
Bacillus stearothermophilus [TaxId: 1422] (23)
1L1TA:235-274MUTM (FPG) BOUND TO ABASIC-SITE CONTAINING DNA
1L1ZA:233-274MUTM (FPG) COVALENT-DNA INTERMEDIATE
1L2BA:233-274MUTM (FPG) DNA END-PRODUCT STRUCTURE
1L2CA:235-274MUTM (FPG)-DNA ESTRANGED THYMINE MISMATCH RECOGNITION COMPLEX
1L2DA:235-274MUTM (FPG)-DNA ESTRANGED GUANINE MISMATCH RECOGNITION COMPLEX
1R2YA:229-274MUTM (FPG) BOUND TO 8-OXOGUANINE (OXOG) CONTAINING DNA
1R2ZA:229-274MUTM (FPG) BOUND TO 5,6-DIHYDROURACIL (DHU) CONTAINING DNA
2F5QA:229-274CATALYTICALLY INACTIVE (E3Q) MUTM CROSSLINKED TO OXOG:C CONTAINING DNA CC2
2F5SA:229-274CATALYTICALLY INACTIVE (E3Q) MUTM CROSSLINKED TO OXOG:C CONTAINING DNA CC1
3GPPA:239-274MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3-T224P COMPLEX
3GPUA:239-274MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC4-LOOP DELETION COMPLEX
3GPXA:238-274SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 4 (IC4)
3GQ3A:238-274MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC5-LOOP DELETION COMPLEX
3GQ4A:229-274SEQUENCE-MATCHED MUTM LESION RECOGNITION COMPLEX 5 (LRC5)
3GQ5A:238-274SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 5 (IC5)
3JR4A:232-274MUTM INTERROGATING AN EXTRAHELICAL G
3SASA:238-274MUTM SLANTED COMPLEX 4 WITH R112A MUTATION
3SATA:239-274MUTM SLANTED COMPLEX 6 WITH R112A MUTATION
3SAWA:238-274MUTM SLANTED COMPLEX 8 WITH R112A MUTATION
4G4NA:238-274MUTM CONTAINING M77A MUTATION BOUND TO UNDAMAGED DNA
4G4OA:238-274MUTM CONTAINING M77A MUTATION BOUND TO OXOG-CONTAINING DNA
4G4QA:237-274MUTM CONTAINING F114A MUTATION BOUND TO UNDAMAGED DNA
4G4RA:238-274MUTM CONTAINING F114A MUTATION BOUND TO OXOG-CONTAINING DNA
(-)
Escherichia coli [TaxId: 562] (1)
1K82A:225-268; B:225-268; C:225-268; D:225-268CRYSTAL STRUCTURE OF E.COLI FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FPG) COVALENTLY TRAPPED WITH DNA
(-)
Lactococcus lactis [TaxId: 1358] (7)
1KFVA:227-271; B:229-271CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS FORMAMIDO-PYRIMIDINE DNA GLYCOSYLASE (ALIAS FPG OR MUTM) NON COVALENTLY BOUND TO AN AP SITE CONTAINING DNA.
1NNJA:224-271CRYSTAL STRUCTURE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG AND AN ABASIC SITE CONTAINING DNA
1PJIA:223-271CRYSTAL STRUCTURE OF WILD TYPE LACTOCOCCUS LACTIS FPG COMPLEXED TO A 1,3 PROPANEDIOL CONTAINING DNA
1PJJA:224-271COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG AND AN ABASIC SITE CONTAINING DNA.
1PM5A:223-271CRYSTAL STRUCTURE OF WILD TYPE LACTOCOCCUS LACTIS FPG COMPLEXED TO A TETRAHYDROFURAN CONTAINING DNA
1TDZA:225-271CRYSTAL STRUCTURE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG (MUTM) AND A FAPY-DG CONTAINING DNA
1XC8A:223-271CRYSTAL STRUCTURE COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND A FAPY-DG CONTAINING DNA
(-)
Thermus thermophilus [TaxId: 274] (1)
1EE8A:211-266; B:211-266CRYSTAL STRUCTURE OF MUTM (FPG) PROTEIN FROM THERMUS THERMOPHILUS HB8
(-)
Protein domain: Endonuclease VIII (8)
(-)
Escherichia coli [TaxId: 562] (8)
1K3WA:223-262CRYSTAL STRUCTURE OF A TRAPPED REACTION INTERMEDIATE OF THE DNA REPAIR ENZYME ENDONUCLEASE VIII WITH DNA
1K3XA:223-262CRYSTAL STRUCTURE OF A TRAPPED REACTION INTERMEDIATE OF THE DNA REPAIR ENZYME ENDONUCLEASE VIII WITH BROMINATED-DNA
1Q39A:217-262CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI: THE WT ENZYME AT 2.8 RESOLUTION.
1Q3BA:217-262CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI: THE R252A MUTANT AT 2.05 RESOLUTION.
1Q3CA:217-262CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI: THE E2A MUTANT AT 2.3 RESOLUTION.
2EA0A:223-262CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE
2OPFA:223-262CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (R252A) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE
2OQ4A:224-262; B:223-262CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (E2Q) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE
(-)
Protein domain: Endonuclease VIII-like 1 (NEIL1) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1TDHA:247-290CRYSTAL STRUCTURE OF HUMAN ENDONUCLEASE VIII-LIKE 1 (NEIL1)
(-)
Family: ClpX chaperone zinc binding domain (5)
(-)
Protein domain: automated matches (4)
(-)
Escherichia coli [TaxId: 562] (4)
2DS5A:; B:STRUCTURE OF THE ZBD IN THE ORTHORHOMIBIC CRYSTAL FROM
2DS6A:; B:STRUCTURE OF THE ZBD IN THE TETRAGONAL CRYSTAL FORM
2DS7A:STRUCTURE OF THE ZBD IN THE HEXAGONAL CRYSTAL FORM
2DS8A:; B:STRUCTURE OF THE ZBD-XB COMPLEX
(-)
Protein domain: ClpX chaperone zinc binding domain (1)
(-)
Escherichia coli [TaxId: 562] (1)
1OVXA:; B:NMR STRUCTURE OF THE E. COLI CLPX CHAPERONE ZINC BINDING DOMAIN DIMER
(-)
Family: DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain (2)
(-)
Protein domain: DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1D4UA:1-36INTERACTIONS OF HUMAN NUCLEOTIDE EXCISION REPAIR PROTEIN XPA WITH RPA70 AND DNA: CHEMICAL SHIFT MAPPING AND 15N NMR RELAXATION STUDIES
1XPAA:98-133SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE
(-)
Family: Erythroid transcription factor GATA-1 (13)
(-)
Protein domain: automated matches (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2M9WA:SOLUTION NMR STRUCTURE OF TRANSCRIPTION FACTOR GATA-4 FROM HOMO SAPIENS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HR4783B
(-)
Mouse (Mus musculus) [TaxId: 10090] (2)
3DFVC:; D:ADJACENT GATA DNA BINDING
3DFXA:; B:OPPOSITE GATA DNA BINDING
(-)
Protein domain: Erythroid transcription factor GATA-1 (10)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (4)
1GATA:SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR
1GAUA:SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR
2GATA:SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, NMR, REGULARIZED MEAN STRUCTURE
3GATA:SOLUTION NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, 34 STRUCTURES
(-)
Emericella nidulans [TaxId: 162425] (4)
4GATA:SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, REGULARIZED MEAN STRUCTURE
5GATA:SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, 35 STRUCTURES
6GATA:SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, REGULARIZED MEAN STRUCTURE
7GATA:SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, 34 STRUCTURES
(-)
Mouse (Mus musculus) [TaxId: 10090] (2)
1GNFA:SOLUTION STRUCTURE OF THE N-TERMINAL ZINC FINGER OF MURINE GATA-1, NMR, 25 STRUCTURES
1Y0JA:ZINC FINGERS AS PROTEIN RECOGNITION MOTIFS: STRUCTURAL BASIS FOR THE GATA-1/FRIEND OF GATA INTERACTION
(-)
Family: FwdE C-terminal domain-like (1)
(-)
Protein domain: Uncharacterized protein Ta1109 (1)
(-)
Thermoplasma acidophilum [TaxId: 2303] (1)
2GVIA:169-201CRYSTAL STRUCTURE OF A PUTATIVE FORMYLMETHANOFURAN DEHYDROGENASE SUBUNIT E (TA1109) FROM THERMOPLASMA ACIDOPHILUM AT 1.87 A RESOLUTION
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Family: Hypothetical zinc finger protein YacG (1)
(-)
Protein domain: Hypothetical zinc finger protein YacG (1)
(-)
Escherichia coli [TaxId: 562] (1)
1LV3A:SOLUTION NMR STRUCTURE OF ZINC FINGER PROTEIN YACG FROM ESCHERICHIA COLI. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ET92.
(-)
Family: LASP-1 (1)
(-)
Protein domain: LASP-1 (1)
(-)
Pig (Sus scrofa) [TaxId: 9823] (1)
1ZFOA:AMINO-TERMINAL LIM-DOMAIN PEPTIDE OF LASP-1, NMR
(-)
Family: LIM domain (37)
(-)
Protein domain: Actin-binding LIM protein 2, abLIM2 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1V6GA:1-41; A:42-81SOLUTION STRUCTURE OF THE LIM DOMAIN OF THE HUMAN ACTIN BINDING LIM PROTEIN 2
1WIGA:1-32; A:33-73SOLUTION STRUCTURE OF RSGI RUH-019, A LIM DOMAIN OF ACTIN BINDING LIM PROTEIN 2 (KIAA1808 PROTEIN) FROM HUMAN CDNA
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Protein domain: Actin-binding LIM protein 3, abLIM-3 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2DJ7A:44-74; A:8-43SOLUTION STRUCTURE OF 3RD LIM DOMAIN OF ACTIN-BINDING LIM PROTEIN 3
(-)
Protein domain: Cysteine-rich (intestinal) protein, CRP, CRIP (8)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (2)
1B8TA:1-35; A:36-100; A:101-143; A:144-192SOLUTION STRUCTURE OF THE CHICKEN CRP1
1CTLA:1-35; A:36-85STRUCTURE OF THE CARBOXY-TERMINAL LIM DOMAIN FROM THE CYSTEINE RICH PROTEIN CRP
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CU8A:8-37; A:38-70SOLUTION STRUCTURE OF THE LIM DOMAIN OF HUMAN CYSTEINE-RICH PROTEIN 2
(-)
Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934] (4)
1A7IA:8-35; A:36-67AMINO-TERMINAL LIM DOMAIN FROM QUAIL CYSTEINE AND GLYCINE-RICH PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
1CXXA:117-144; A:145-175MUTANT R122A OF QUAIL CYSTEINE AND GLYCINE-RICH PROTEIN, NMR, MINIMIZED STRUCTURE
1IBIA:117-144; A:145-175QUAIL CYSTEINE AND GLYCINE-RICH PROTEIN, NMR, 15 MINIMIZED MODEL STRUCTURES
1QLIA:117-144; A:145-175QUAIL CYSTEINE AND GLYCINE-RICH PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
(-)
Rat (Rattus rattus) [TaxId: 10117] (1)
1IMLA:1-28; A:29-76CYSTEINE RICH INTESTINAL PROTEIN, NMR, 48 STRUCTURES
(-)
Protein domain: Eplin, LIMA1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2D8YA:9-43; A:44-85SOLUTION STRUCTURE OF THE LIM DOMAIN OF EPITHELIAL PROTEIN LOST IN NEOPLASM
(-)
Protein domain: Four and a half LIM domains 3, FHL3 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1WYHA:35-66; A:8-34SOLUTION STRUCTURE OF THE LIM DOMAIN FROM HUMAN SKELETAL MUSCLE LIM-PROTEIN 2
2CUQA:43-74; A:8-42SOLUTION STRUCTURE OF SECOND LIM DOMAIN FROM HUMAN SKELETAL MUSCLE LIM-PROTEIN 2
(-)
Protein domain: Four and a half LIM domains protein 1, FHL-1 (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1X63A:8-44; A:45-76SOLUTION STRUCTURE OF THE SECOND LIM DOMAIN OF SKELETAL MUSCLE LIM PROTEIN 1
2CUPA:66-95; A:35-65; A:8-34SOLUTION STRUCTURE OF THE SKELETAL MUSCLE LIM-PROTEIN 1
2CURA:33-63; A:8-32SOLUTION STRUCTURE OF SKELETAL MUSCLE LIM-PROTEIN 1
(-)
Protein domain: Four and a half LIM domains protein 2, FHL2 (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1X4KA:35-66; A:8-34SOLUTION STRUCTURE OF LIM DOMAIN IN LIM-PROTEIN 3
1X4LA:8-36; A:37-66SOLUTION STRUCTURE OF LIM DOMAIN IN FOUR AND A HALF LIM DOMAINS PROTEIN 2
2D8ZA:8-32; A:33-64SOLUTION STRUCTURE OF THE THIRD LIM DOMAIN OF FOUR AND A HALF LIM DOMAINS PROTEIN 2 (FHL-2)
(-)
Protein domain: Four and a half LIM domains protein 5, FHL-5 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1X68A:8-36; A:37-70SOLUTION STRUCTURES OF THE C-TERMINAL LIM DOMAIN OF HUMAN FHL5 PROTEIN
(-)
Protein domain: Leupaxin (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1X3HA:8-42; A:43-74SOLUTION STRUCTURE OF THE LIM DOMAIN OF HUMAN LEUPAXIN
(-)
Protein domain: Lim domain kinase 2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1X6AA:8-41; A:42-75SOLUTION STRUCTURES OF THE SECOND LIM DOMAIN OF HUMAN LIM-KINASE 2 (LIMK2)
(-)
Protein domain: LIM only 4 (Lmo4) (2)
(-)
Mouse (Mus musculus) [TaxId: 10090] (2)
1M3VA:1-32; A:33-71FLIN4: FUSION OF THE LIM BINDING DOMAIN OF LDB1 AND THE N-TERMINAL LIM DOMAIN OF LMO4
1RUTX:19-48; X:49-82; X:83-113; X:114-146COMPLEX OF LMO4 LIM DOMAINS 1 AND 2 WITH THE LDB1 LID DOMAIN
(-)
Protein domain: Nedd9 interacting protein with calponin homology, NICAL (MICAL1) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2CO8A:44-76; A:8-43SOLUTION STRUCTURES OF THE LIM DOMAIN OF HUMAN NEDD9 INTERACTING PROTEIN WITH CALPONIN HOMOLOGY AND LIM DOMAINS
(-)
Protein domain: PDZ and LIM domain protein 1 Elfin (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1X62A:43-73; A:8-42SOLUTION STRUCTURE OF THE LIM DOMAIN OF CARBOXYL TERMINAL LIM DOMAIN PROTEIN 1
(-)
Protein domain: PDZ and LIM domain protein 3, PDLIM3 (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1X64A:8-52; A:53-83SOLUTION STRUCTURE OF THE LIM DOMAIN OF ALPHA-ACTININ-2 ASSOCIATED LIM PROTEIN
(-)
Protein domain: PDZ and LIM domain protein 5, Enigma (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2DARA:53-84; A:8-52SOLUTION STRUCTURE OF FIRST LIM DOMAIN OF ENIGMA-LIKE PDZ AND LIM DOMAINS PROTEIN
(-)
Protein domain: Pinch (particularly interesting new Cys-His) protein (5)
(-)
Human (Homo sapiens) [TaxId: 9606] (5)
1G47A:1-35; A:36-701ST LIM DOMAIN OF PINCH PROTEIN
1NYPA:1-31; A:32-664TH LIM DOMAIN OF PINCH PROTEIN
1U5SB:72-102; B:103-137NMR STRUCTURE OF THE COMPLEX BETWEEN NCK-2 SH3 DOMAIN AND PINCH-1 LIM4 DOMAIN
2CORA:43-73; A:8-42SOLUTION STRUCTURE OF THE THIRD LIM DOMAIN OF PARTICULARLY INTERESTING NEW CYS-HIS PROTEIN
2D8XA:33-64; A:8-32SOLUTION STRUCTURE OF THE SECOND LIM DOMAIN OF PARTICULARLY INTERESTING NEW CYS-HIS PROTEIN (PINCH)
(-)
Protein domain: Rhombotin-2 (Lmo2) (1)
(-)
Mouse (Mus musculus) [TaxId: 10090] (1)
1J2OA:1-30; A:31-63STRUCTURE OF FLIN2, A COMPLEX CONTAINING THE N-TERMINAL LIM DOMAIN OF LMO2 AND LDB1-LID
(-)
Protein domain: Thyroid receptor interacting protein 6, TRIP6 (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1X61A:8-34; A:35-66SOLUTION STRUCTURE OF THE FIRST LIM DOMAIN OF THYROID RECEPTOR INTERACTING PROTEIN 6 (TRIP6)
2DLOA:8-42; A:43-75SOLUTION STRUCTURE OF THE SECOND LIM DOMAIN OF HUMAN THYROID RECEPTOR-INTERACTING PROTEIN 6
(-)
Family: Nuclear receptor (49)
(-)
Protein domain: Androgen receptor (1)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1R4IA:; B:CRYSTAL STRUCTURE OF ANDROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO A DIRECT REPEAT RESPONSE ELEMENT
(-)
Protein domain: automated matches (15)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
2HANA:; B:STRUCTURAL BASIS OF HETERODIMERIC ECDYSTEROID RECEPTOR INTERACTION WITH NATURAL RESPONSE ELEMENT HSP27 GENE PROMOTER
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1YNWB:CRYSTAL STRUCTURE OF VITAMIN D RECEPTOR AND 9-CIS RETINOIC ACID RECEPTOR DNA-BINDING DOMAINS BOUND TO A DR3 RESPONSE ELEMENT
2ENVA:SOLUTION STURCTURE OF THE C4-TYPE ZINC FINGER DOMAIN FROM HUMAN PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR DELTA
3CBBA:; B:CRYSTAL STRUCTURE OF HEPATOCYTE NUCLEAR FACTOR 4ALPHA IN COMPLEX WITH DNA: DIABETES GENE PRODUCT
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (11)
3FYLA:; B:GR DNA BINDING DOMAIN:CGT COMPLEX
3G6PA:; B:GR DNA BINDING DOMAIN:FKBP5 COMPLEX, 18BP
3G6QA:; B:GR DNA BINDING DOMAIN:FKBP5 BINDING SITE COMPLEX-9
3G6RA:; B:GR DNA BINDING DOMAIN:FKBP5 COMPLEX-52, 18BP
3G6TA:; B:GR GAMMA DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-34
3G6UA:; B:GR DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-49
3G8UA:; B:DNA BINDING DOMAIN:GILZ 16BP COMPLEX-5
3G8XA:; B:GR DNA BINDING DOMAIN:GILZ 16BP COMPLEX-65
3G97A:; B:GR DNA-BINDING DOMAIN:GILZ 16BP COMPLEX-9
3G99A:; B:GR DNA BINDING DOMAIN:PAL COMPLEX-9
3G9IA:; B:GR DNA BINDING DOMAIN: PAL COMPLEX-35
(-)
Protein domain: Ecdysone receptor DNA-binding domain (2)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (2)
1R0NB:CRYSTAL STRUCTURE OF HETERODIMERIC ECDSYONE RECEPTOR DNA BINDING COMPLEX
1R0OB:CRYSTAL STRUCTURE OF THE HETERODIMERIC ECDYSONE RECEPTOR DNA-BINDING COMPLEX
(-)
Protein domain: Estrogen receptor DNA-binding domain (2)
(-)
Human and chicken (Homo sapiens) and (Gallus gallus) [TaxId: 9606] (2)
1HCPA:DNA RECOGNITION BY THE OESTROGEN RECEPTOR: FROM SOLUTION TO THE CRYSTAL
1HCQA:; B:; E:; F:THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS
(-)
Protein domain: Glucocorticoid receptor DNA-binding domain (11)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (11)
1GDCA:REFINED SOLUTION STRUCTURE OF THE GLUCOCORTICOID RECEPTOR DNA-BINDING DOMAIN
1GLUA:; B:CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA
1LATA:; B:GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEX
1R4OA:; B:CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA
1R4RA:; B:CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA
1RGDA:STRUCTURE REFINEMENT OF THE GLUCOCORTICOID RECEPTOR-DNA BINDING DOMAIN FROM NMR DATA BY RELAXATION MATRIX CALCULATIONS
2GDAA:REFINED SOLUTION STRUCTURE OF THE GLUCOCORTICOID RECEPTOR DNA-BINDING DOMAIN
3G9JA:; B:GR DNA BINDING DOMAIN:PAL, 18BP COMPLEX-36
3G9MA:; B:GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-44
3G9OA:; B:GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-9
3G9PA:; B:GR DNA BINDING DOMAIN:SGK 16BP COMPLEX-7
(-)
Protein domain: Orphan nuclear receptor NGFI-B DNA-binding domain (1)
(-)
Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
1CITA:DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-B
(-)
Protein domain: Orphan nuclear receptor reverb DNA-binding domain (3)
(-)
Human (Homo sapiens) [TaxId: 9606] (3)
1A6YA:; B:REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX
1GA5A:; B:; E:; F:CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
1HLZA:; B:CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
(-)
Protein domain: Retinoic acid receptor DNA-binding domain (2)
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1DSZA:STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
1HRAA:THE SOLUTION STRUCTURE OF THE HUMAN RETINOIC ACID RECEPTOR-BETA DNA-BINDING DOMAIN
(-)
Protein domain: Retinoid X receptor (RXR-alpha) DNA-binding domain (5)
(-)
Human (Homo sapiens) [TaxId: 9606] (5)
1BY4A:; B:; C:; D:STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA
1DSZB:STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
1R0NA:CRYSTAL STRUCTURE OF HETERODIMERIC ECDSYONE RECEPTOR DNA BINDING COMPLEX
1RXRA:HIGH RESOLUTION SOLUTION STRUCTURE OF THE RETINOID X RECEPTOR DNA BINDING DOMAIN, NMR, 20 STRUCTURE
2NLLA:RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA
(-)
Protein domain: Steroid hormone receptor Err2 DNA-binding domain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1LO1A:ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA
(-)
Protein domain: Thyroid hormone receptor (TR-beta) DNA-binding domain (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2NLLB:RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA
(-)
Protein domain: Ultraspiracle protein (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1R0OA:CRYSTAL STRUCTURE OF THE HETERODIMERIC ECDYSONE RECEPTOR DNA-BINDING COMPLEX
(-)
Protein domain: Vitamin D3 receptor, VDR, DNA-binding domain (4)
(-)
Human (Homo sapiens) [TaxId: 9606] (4)
1KB2A:; B:CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO MOUSE OSTEOPONTIN (SPP) RESPONSE ELEMENT
1KB4A:; B:CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO A CANONICAL DIRECT REPEAT WITH THREE BASE PAIR SPACER (DR3) RESPONSE ELEMENT
1KB6A:; B:CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO RAT OSTEOCALCIN (OC) RESPONSE ELEMENT
1YNWA:18-113CRYSTAL STRUCTURE OF VITAMIN D RECEPTOR AND 9-CIS RETINOIC ACID RECEPTOR DNA-BINDING DOMAINS BOUND TO A DR3 RESPONSE ELEMENT
(-)
Family: PARP-type zinc finger (1)
(-)
Protein domain: DNA ligase III (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1UW0A:SOLUTION STRUCTURE OF THE ZINC-FINGER DOMAIN FROM DNA LIGASE IIIA
(-)
Family: Prokaryotic DksA/TraR C4-type zinc finger (1)
(-)
Protein domain: DnaK suppressor protein DksA, zinc finger domain (1)
(-)
Escherichia coli [TaxId: 562] (1)
1TJLA:111-151; B:111-151; C:111-151; D:111-151; E:111-151; F:111-151; G:111-151; H:111-151; I:111-151; J:111-151CRYSTAL STRUCTURE OF TRANSCRIPTION FACTOR DKSA FROM E. COLI
(-)
Family: Ribosomal protein L24e (44)
(-)
Protein domain: Ribosomal protein L24e (44)
(-)
Haloarcula marismortui [TaxId: 2238] (44)
1FFKR:CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
1JJ2T:FULLY REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
1K73V:CO-CRYSTAL STRUCTURE OF ANISOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
1K8AV:CO-CRYSTAL STRUCTURE OF CARBOMYCIN A BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1K9MV:CO-CRYSTAL STRUCTURE OF TYLOSIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1KC8V:CO-CRYSTAL STRUCTURE OF BLASTICIDIN S BOUND TO THE 50S RIBOSOMAL SUBUNIT
1KD1V:CO-CRYSTAL STRUCTURE OF SPIRAMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1KQST:THE HALOARCULA MARISMORTUI 50S COMPLEXED WITH A PRETRANSLOCATIONAL INTERMEDIATE IN PROTEIN SYNTHESIS
1M1KV:CO-CRYSTAL STRUCTURE OF AZITHROMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1M90V:CO-CRYSTAL STRUCTURE OF CCA-PHE-CAPROIC ACID-BIOTIN AND SPARSOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
1N8RV:STRUCTURE OF LARGE RIBOSOMAL SUBUNIT IN COMPLEX WITH VIRGINIAMYCIN M
1NJIV:STRUCTURE OF CHLORAMPHENICOL BOUND TO THE 50S RIBOSOMAL SUBUNIT
1Q7YV:CRYSTAL STRUCTURE OF CCDAP-PUROMYCIN BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE 50S RIBOSOMAL SUBUNIT
1Q81V:CRYSTAL STRUCTURE OF MINIHELIX WITH 3' PUROMYCIN BOUND TO A-SITE OF THE 50S RIBOSOMAL SUBUNIT.
1Q82V:CRYSTAL STRUCTURE OF CC-PUROMYCIN BOUND TO THE A-SITE OF THE 50S RIBOSOMAL SUBUNIT
1Q86V:CRYSTAL STRUCTURE OF CCA-PHE-CAP-BIOTIN BOUND SIMULTANEOUSLY AT HALF OCCUPANCY TO BOTH THE A-SITE AND P-SITE OF THE THE 50S RIBOSOMAL SUBUNIT.
1QVFT:STRUCTURE OF A DEACYLATED TRNA MINIHELIX BOUND TO THE E SITE OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1QVGT:STRUCTURE OF CCA OLIGONUCLEOTIDE BOUND TO THE TRNA BINDING SITES OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1S72U:REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
1VQ4U:4-56THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ5U:4-56THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ6U:4-56THE STRUCTURE OF C-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ7U:4-56THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ8U:4-56THE STRUCTURE OF CCDA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ9U:4-56THE STRUCTURE OF CCA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQKU:4-56THE STRUCTURE OF CCDA-PHE-CAP-BIO BOUND TO THE A SITE OF THE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQLU:4-56THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCSN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQMU:4-56THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQNU:4-56THE STRUCTURE OF CC-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQOU:4-56THE STRUCTURE OF CCPMN BOUND TO THE LARGE RIBOSOMAL SUBUNIT HALOARCULA MARISMORTUI
1VQPU:4-56THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAP" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YHQU:4-56CRYSTAL STRUCTURE OF AZITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YI2U:4-56CRYSTAL STRUCTURE OF ERYTHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YIJU:4-56CRYSTAL STRUCTURE OF TELITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YITU:4-56CRYSTAL STRUCTURE OF VIRGINIAMYCIN M AND S BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJ9U:4-56CRYSTAL STRUCTURE OF THE MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI CONTAINING A THREE RESIDUE DELETION IN L22
1YJNU:4-56CRYSTAL STRUCTURE OF CLINDAMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJWU:4-56CRYSTAL STRUCTURE OF QUINUPRISTIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
2OTJU:4-5613-DEOXYTEDANOLIDE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
2OTLU:4-56GIRODAZOLE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
(-)
Family: Ribosomal protein S14 (69)
(-)
Protein domain: Ribosomal protein S14 (69)
(-)
Thermus thermophilus [TaxId: 274] (45)
1FJGN:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
1HNWN:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
1HNXN:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
1HNZN:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
1HR0N:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1I94N:CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
1I95N:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
1I96N:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
1I97N:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
1J5EN:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT
1N32N:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N33N:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N34N:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
1N36N:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
1XMON:CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
1XMQN:CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
1XNQN:STRUCTURE OF AN INOSINE-ADENINE WOBBLE BASE PAIR COMPLEX IN THE CONTEXT OF THE DECODING CENTER
1XNRN:CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
2E5LN:2-61A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
2F4VN:2-6130S RIBOSOME + DESIGNER ANTIBIOTIC
2HHHN:2-61CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
2UU9N:2-61STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUG-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUAN:2-61STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUC-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUBN:2-61STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUCN:2-61STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUA-CODON IN THE A-SITE AND PAROMOMYCIN.
2UXBN:2-61CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXCN:2-61CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXDN:2-61CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2VQEN:2-61MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
2VQFN:2-61MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
(-)
Family: THAP domain (1)
(-)
Protein domain: THAP domain-containing protein 2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2D8RA:8-93SOLUTION STRUCTURE OF THE THAP DOMAIN OF THE HUMAN THAP DOMAIN-CONTAINING PROTEIN 2
(-)
Family: Transcription factor grauzone Cg33133-Pa, zinc finger associated domain (1)
(-)
Protein domain: Transcription factor grauzone Cg33133-Pa, zinc finger associated domain (1)
(-)
Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
1PZWA:CRYSTAL STRUCTURE OF THE ZINC FINGER ASSOCIATED DOMAIN OF THE DROSOPHILA TRANSCRIPTION FACTOR GRAUZONE
(-)
Family: TRASH domain (1)
(-)
Protein domain: Zinc finger MYM-type protein 5 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2DASA:8-56SOLUTION STRUCTURE OF TRASH DOMAIN OF ZINC FINGER MYM-TYPE PROTEIN 5
(-)
Family: Type II thymidine kinase zinc finger (6)
(-)
Protein domain: Thymidine kinase, TK1, C-terminal domain (6)
(-)
Clostridium acetobutylicum [TaxId: 1488] (1)
1XX6A:143-191; B:143-191X-RAY STRUCTURE OF CLOSTRIDIUM ACETOBUTYLICUM THYMIDINE KINASE WITH ADP. NORTHEAST STRUCTURAL GENOMICS TARGET CAR26.
(-)
Human (Homo sapiens) [TaxId: 9606] (2)
1XBTA:151-191; B:151-191; C:151-191; D:151-191; E:151-191; F:151-191; G:151-191; H:151-191CRYSTAL STRUCTURE OF HUMAN THYMIDINE KINASE 1
2ORVA:151-191; B:151-191HUMAN THYMIDINE KINASE 1 IN COMPLEX WITH TP4A
(-)
Staphylococcus aureus [TaxId: 1280] (1)
3E2IA:143-192CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM S. AUREUS
(-)
Ureaplasma urealyticum [TaxId: 2130] (2)
2B8TA:150-216; B:150-214; C:150-217; D:150-219CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM U.UREALYTICUM IN COMPLEX WITH THYMIDINE
2UZ3A:150-217; B:150-217; C:150-217; D:150-217CRYSTAL STRUCTURE OF THYMIDINE KINASE WITH DTTP FROM U. UREALYTICUM
(-)
Fold: SBT domain (3)
(-)
Superfamily: SBT domain (3)
(-)
Family: SBT domain (3)
(-)
Protein domain: Squamosa promoter binding protein-like 4, DNA-binding domain (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1UL4A:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4
(-)
Protein domain: Squamosa promoter binding protein-like 7, DNA-binding domain (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1UL5A:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7
(-)
Protein domain: Squamosa-promoter binding-like protein 12, DNA-binding domain (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
1WJ0A:SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 12 LACKING THE SECOND ZINC-BINDING SITE
(-)
Fold: WRKY DNA-binding domain (3)
(-)
Superfamily: WRKY DNA-binding domain (3)
(-)
Family: automated matches (1)
(-)
Protein domain: automated matches (1)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)
2AYDA:CRYSTAL STRUCTURE OF THE C-TERMINAL WRKY DOMAINOF ATWRKY1, AN SA-INDUCED AND PARTIALLY NPR1-DEPENDENT TRANSCRIPTION FACTOR
(-)
Family: WRKY DNA-binding domain (2)
(-)
Protein domain: WRKY DNA-binding protein 4 (2)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (2)
1WJ2A:SOLUTION STRUCTURE OF THE C-TERMINAL WRKY DOMAIN OF ATWRKY4
2LEXA:COMPLEX OF THE C-TERMINAL WRKY DOMAIN OF ATWRKY4 AND A W-BOX DNA
(-)
Fold: Zn-binding domains of ADDBP (8)
(-)
Superfamily: Zn-binding domains of ADDBP (8)
(-)
Family: Zn-binding domains of ADDBP (8)
(-)
Protein domain: First Zn-domain of early E2A DNA-binding protein, ADDBP (4)
(-)
Human adenovirus type 5 [TaxId: 28285] (4)
1ADUA:266-385; B:266-385EARLY E2A DNA-BINDING PROTEIN
1ADVA:266-385; B:266-385EARLY E2A DNA-BINDING PROTEIN
1ANVA:266-385ADENOVIRUS 5 DBP/URANYL FLUORIDE SOAK
2WB0X:266-3852.1 RESOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF THE HUMAN ADENOVIRUS 5 SSDNA BINDING PROTEIN
(-)
Protein domain: Second Zn-domain of early E2A DNA-binding protein, ADDBP (4)
(-)
Human adenovirus type 5 [TaxId: 28285] (4)
1ADUA:386-529; B:386-529EARLY E2A DNA-BINDING PROTEIN
1ADVA:386-529; B:386-529EARLY E2A DNA-BINDING PROTEIN
1ANVA:386-529ADENOVIRUS 5 DBP/URANYL FLUORIDE SOAK
2WB0X:386-5292.1 RESOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF THE HUMAN ADENOVIRUS 5 SSDNA BINDING PROTEIN
(-)
Fold: Zn2/Cys6 DNA-binding domain (15)
(-)
Superfamily: Zn2/Cys6 DNA-binding domain (15)
(-)
Family: Zn2/Cys6 DNA-binding domain (15)
(-)
Protein domain: CD2-Lac9 (1)
(-)
Milk yeast (Kluyveromyces lactis) [TaxId: 28985] (1)
1CLDA:DNA-BINDING PROTEIN
(-)
Protein domain: Ethanol regulon transcriptional activator ALCR DNA-binding domain (4)
(-)
Emericella nidulans, also known as Aspergillus nidulans [TaxId: 162425] (4)
1F4SP:STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
1F5EP:STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
2ALCA:ETHANOL REGULON TRANSCRIPTIONAL ACTIVATOR DNA-BINDING DOMAIN FROM ASPERGILLUS NIDULANS
3ALCA:ETHANOL REGULON TRANSCRIPTIONAL ACTIVATOR DNA-BINDING DOMAIN FROM ASPERGILLUS NIDULANS
(-)
Protein domain: Gal4 (3)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (3)
1AW6A:GAL4 (CD), NMR, 24 STRUCTURES
1D66A:8-48; B:8-48DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX
3COQA:8-48; B:8-48STRUCTURAL BASIS FOR DIMERIZATION IN DNA RECOGNITION BY GAL4
(-)
Protein domain: Hap1 (Cyp1) (4)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (4)
1HWTC:59-97; D:55-97; G:59-97; H:56-97STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN
1PYCA:CYP1 (HAP1) DNA-BINDING DOMAIN (RESIDUES 60-100), NMR, 15 STRUCTURES
1QP9A:55-97; B:56-97; C:58-97; D:55-97STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7
2HAPC:55-97; D:56-97STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION
(-)
Protein domain: PPR1 (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1PYIA:30-71; B:30-71CRYSTAL STRUCTURE OF A PPR1-DNA COMPLEX: DNA RECOGNITION BY PROTEINS CONTAINING A ZN2CYS6 BINUCLEAR CLUSTER
(-)
Protein domain: PUT3 (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1AJYA:30-66; B:30-66STRUCTURE AND MOBILITY OF THE PUT3 DIMER: A DNA PINCER, NMR, 13 STRUCTURES
1ZMEC:31-66; D:31-66CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX