Chain A from PDB Type:PROTEIN Length:182
aligned with OSTF1_HUMAN | Q92882 from UniProtKB/Swiss-Prot Length:214
Alignment length:182
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
OSTF1_HUMAN 12 GQVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQ 193
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3ehqA01 A:12-74 SH3 Domains 3ehqA02 A:75-193 [code=1.25.40.20, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeee..................eeeeee.....eeeeee..eeeeeehhhhhhheeee.hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhh.hhhhhhhhhh..............hhhhhhhhh.hhhhhhhhhhh.............hhhhh.hhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------S--------------------------------------------------------------------------------------------------------------F---------------------------------- SAPs(SNPs)
PROSITE (1) SH3 PDB: A:12-71 UniProt: 12-71 ANK_REP_REGION PDB: A:72-171 UniProt: 72-171 ---------------------- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------ANK_REPEAT PDB: A:139-171 ---------------------- PROSITE (2)
Transcript 1 (1) 1---------------Exon 1.3 Exon 1.4 PDB: A:45-66-----------------Exon 1.6 PDB: A:84-120 ----------------Exon 1.8 PDB: A:137-163 ------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.2 --------------------------------------Exon 1.5 -----------------------------------Exon 1.7 --------------------------Exon 1.9 PDB: A:163-193 Transcript 1 (2)
3EHQ A 12 GQVKVFRALYTFEPRTPDELYIEEGDIIYITDmSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEmLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDmATNAACASLLKKKQ 193
21 31 41 | 51 61 71 81 91 101 111 121 | 131 141 151 161 171 181 191
44-MSE 124-MSE 179-MSE
Chain B from PDB Type:PROTEIN Length:181
aligned with OSTF1_HUMAN | Q92882 from UniProtKB/Swiss-Prot Length:214
Alignment length:181
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
OSTF1_HUMAN 12 GQVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKK 192
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3ehqB01 B:12-74 SH3 Domains 3ehqB02 B:75-192 [code=1.25.40.20, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeee..................eeee.......eeeeee..eeeeeehhhhhhheeee.hhhhhhhhh.hhhhhhhhhhh............hhhhhhhhh.hhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhh............hhhhhh.hhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------S--------------------------------------------------------------------------------------------------------------F--------------------------------- SAPs(SNPs)
PROSITE (1) SH3 PDB: B:12-71 UniProt: 12-71 ANK_REP_REGION PDB: B:72-171 UniProt: 72-171 --------------------- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------ANK_REPEAT PDB: B:139-171 --------------------- PROSITE (2)
Transcript 1 (1) 1---------------Exon 1.3 Exon 1.4 PDB: B:45-66-----------------Exon 1.6 PDB: B:84-120 ----------------Exon 1.8 PDB: B:137-163 ----------------------------- Transcript 1 (1)
Transcript 1 (2) Exon 1.2 --------------------------------------Exon 1.5 -----------------------------------Exon 1.7 --------------------------Exon 1.9 PDB: B:163-192 Transcript 1 (2)
3EHQ B 12 GQVKVFRALYTFEPRTPDELYIEEGDIIYITDmSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEmLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDmATNAACASLLKKK 192
21 31 41 | 51 61 71 81 91 101 111 121 | 131 141 151 161 171 181 191
44-MSE 124-MSE 179-MSE
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
