Chain A from PDB Type:PROTEIN Length:267
aligned with NEK2_HUMAN | P51955 from UniProtKB/Swiss-Prot Length:445
Alignment length:277
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272
NEK2_HUMAN 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIADLVADEQ 279
SCOP domains d2w5aa_ A: automated matches SCOP domains
CATH domains 2w5aA01 A:3-45,A:69-89 2w5aA02 2w5aA01 2w5aA02 A:46-68,A:90-279 Transferase(Phosp hotransferase) domain 1 CATH domains
Pfam domains -----Pkinase-2w5aA01 A:8-271 -------- Pfam domains
Sec.struct. author .hhh.eeeeeeeee....eeeeeee.....eeeeeeee....hhhhhhhhhhhhhhhhhh.......eeeeeeehhh.eeeeeee....eehhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh------.....hhh.eee.....eee...hhhhhh---hhhhhhhhh.....hhhhhhh.-.hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.........hhhhhhhhhhhh..hhhhh.hhhhhhh....hhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------PROTEIN_KINAS---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.1a PDB: A:3-32 Exon 1.2 PDB: A:33-105 UniProt: 33-105 --------------------------------------------------------------------------------Exon 1.4a UniProt: 186-213 ------------------------------------------Exon 1.6b PDB: A:256-27 Transcript 1 (1)
Transcript 1 (2) ------------------------------------------------------------------------------------------------------Exon 1.3 PDB: A:105-185 (gaps) UniProt: 105-185 ---------------------------Exon 1.5a PDB: A:213-255 UniProt: 213-255 ------------------------ Transcript 1 (2)
2W5A A 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS------LHRDLKPANVFLDGKQNVKLGDFGLARIL---TSFAKTFVGTPYYMSPEQMNRM-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHHHH 279
12 22 32 42 52 62 72 82 92 102 112 122 |- | 142 152 162 | 172 182 |-| 202 212 222 232 242 252 262 272
131 138 166 170 191 |
193
| Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
