Chain A from PDB Type:PROTEIN Length:153
aligned with UB2D3_HUMAN | P61077 from UniProtKB/Swiss-Prot Length:147
Alignment length:153
1
| 4 14 24 34 44 54 64 74 84 94 104 114 124 134 144
UB2D3_HUMAN - ------MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
SCOP domains ------d1x23a1 A:1-147 Ubiquitin conjugating enzyme, UBC SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhhh....eeeee......eeeeeee..........eeeeeee..........eeee................hhhhh.......hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---------UBIQUITIN_CONJUGAT_2 PDB: A:4-136 UniProt: 4-136 ----------- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------UBIQUITIN_CONJUG---------------------------------------------------------- PROSITE (2)
Transcript 1 (1) ------1.3d Exon 1.6c PDB: A:9-30----------Exon 1.9c PDB: A:41-66 -----------------------------------Exon 1.10b PDB: A:102-133 -------------- Transcript 1 (1)
Transcript 1 (2) -----------------------------------Exon 1.7b --------------------------Exon 1.9l PDB: A:67-102 ------------------------------Exon 1.12n Transcript 1 (2)
1X23 A -6 LGSPEFMALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
|| 4 14 24 34 44 54 64 74 84 94 104 114 124 134 144
-1|
1
Chain B from PDB Type:PROTEIN Length:152
aligned with UB2D3_HUMAN | P61077 from UniProtKB/Swiss-Prot Length:147
Alignment length:152
1
| 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145
UB2D3_HUMAN - -----MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
SCOP domains d1x23b_ B: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhh....eeeeee..eeeeeeeeee..........eeeeeee..........eeee................hhhhh.......hhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --------UBIQUITIN_CONJUGAT_2 PDB: B:4-136 UniProt: 4-136 ----------- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------UBIQUITIN_CONJUG---------------------------------------------------------- PROSITE (2)
Transcript 1 (1) -----1.3d Exon 1.6c PDB: B:9-30----------Exon 1.9c PDB: B:41-66 -----------------------------------Exon 1.10b PDB: B:102-133 -------------- Transcript 1 (1)
Transcript 1 (2) ----------------------------------Exon 1.7b --------------------------Exon 1.9l PDB: B:67-102 ------------------------------Exon 1.12n Transcript 1 (2)
1X23 B -5 GSPEFMALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
|| 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145
-1|
1
Chain C from PDB Type:PROTEIN Length:152
aligned with UB2D3_HUMAN | P61077 from UniProtKB/Swiss-Prot Length:147
Alignment length:152
1
| 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145
UB2D3_HUMAN - -----MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
SCOP domains d1x23c_ C: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhh....eeeee......eeeeeee..........eeeeeee..........eeee................hhhhh.......hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --------UBIQUITIN_CONJUGAT_2 PDB: C:4-136 UniProt: 4-136 ----------- PROSITE (1)
PROSITE (2) ------------------------------------------------------------------------------UBIQUITIN_CONJUG---------------------------------------------------------- PROSITE (2)
Transcript 1 (1) -----1.3d Exon 1.6c PDB: C:9-30----------Exon 1.9c PDB: C:41-66 -----------------------------------Exon 1.10b PDB: C:102-133 -------------- Transcript 1 (1)
Transcript 1 (2) ----------------------------------Exon 1.7b --------------------------Exon 1.9l PDB: C:67-102 ------------------------------Exon 1.12n Transcript 1 (2)
1X23 C -5 GSPEFMALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
|| 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145
-1|
1
Chain D from PDB Type:PROTEIN Length:154
aligned with UB2D3_HUMAN | P61077 from UniProtKB/Swiss-Prot Length:147
Alignment length:154
1
| 3 13 23 33 43 53 63 73 83 93 103 113 123 133 143
UB2D3_HUMAN - -------MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
SCOP domains d1x23d_ D: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -----------UQ_con-1x23D01 D:5-142 ----- Pfam domains (1)
Pfam domains (2) -----------UQ_con-1x23D02 D:5-142 ----- Pfam domains (2)
Pfam domains (3) -----------UQ_con-1x23D03 D:5-142 ----- Pfam domains (3)
Pfam domains (4) -----------UQ_con-1x23D04 D:5-142 ----- Pfam domains (4)
Sec.struct. author .....hhhhhhhhhhhhhhhhhh....eeeee......eeeeeee..........eeeeeee..........eeee................hhhhh.......hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----------UBIQUITIN_CONJUGAT_2 PDB: D:4-136 UniProt: 4-136 ----------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------UBIQUITIN_CONJUG---------------------------------------------------------- PROSITE (2)
Transcript 1 (1) -------1.3d Exon 1.6c PDB: D:9-30----------Exon 1.9c PDB: D:41-66 -----------------------------------Exon 1.10b PDB: D:102-133 -------------- Transcript 1 (1)
Transcript 1 (2) ------------------------------------Exon 1.7b --------------------------Exon 1.9l PDB: D:67-102 ------------------------------Exon 1.12n Transcript 1 (2)
1X23 D -7 PLGSPEFMALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
|| 3 13 23 33 43 53 63 73 83 93 103 113 123 133 143
-1|
1
| Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
