Chain A from PDB Type:PROTEIN Length:107
aligned with NEB1_HUMAN | Q9ULJ8 from UniProtKB/Swiss-Prot Length:1098
Alignment length:237
424 434 444 454 464 474 484 494 504 514 524 534 544 554 564 574 584 594 604 614 624 634 644
NEB1_HUMAN 415 GETGTEQDEEEDSDENSYYQPDMEYSEIVGLPEEEEIPANRKIKFSSAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLEQHYAQYDADDDETGEYATDEEEDEVGPVLPGSD 651
SCOP domains -------------------------------------------------------------------------------------d1wf8a1 A:8-101 Neurabin-i ---------------------------------------------------------- SCOP domains
CATH domains 1wf8 A00 A:1-107 [code=2.30.42.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....-----------------------------------------...-------------------------------------eeeeeeeee.......eeeeeeee.......eeeeeeeee...hhhhhhh.......eeee..ee....hhhhhhhhhhhh..eeeeeeeee...-------------------------------------------------.---.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------PDZ PDB: A:12-100 UniProt: 504-592 ----------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.5c PDB: A:1-7 (gaps) UniProt: 1-465 Exon 1.6 PDB: A:8-18 UniProt: 466-510 ---------------------------------------Exon 1.8 PDB: A:58-93 ---------------------------------------------Exon 1.11 Transcript 1 (1)
Transcript 1 (2) -----------------------------------------------------------------------------------------------Exon 1.7 PDB: A:18-58 UniProt: 510-550 ----------------------------------Exon 1.9 PDB: A:93-102 UniProt: 585-630 --------------------- Transcript 1 (2)
1WF8 A 1 GSSG-----------------------------------------SSG-------------------------------------LELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPS-------------------------------------------------G---PSSG 107
| - - - - | | - - - - | 12 22 32 42 52 62 72 82 92 102 - - - - 103 |
4 5 7 8 102 103 104
| Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
