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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:157
 aligned with CAPSD_RMVHR | P03580 from UniProtKB/Swiss-Prot  Length:157

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
          CAPSD_RMVHR     1 MSYNITNSNQYQYFAAVWAEPTPMLNQCVSALSQSYQTQAGRDTVRQQFANLLSTIVAPNQRFPDTGFRVYVNSAVIKPLYEALMKSFDTRNRIIETEEESRPSASEVANATQRVDDATVAIRSQIQLLLNELSNGHGYMNRAEFEAILPWTTAPAT 157
               SCOP domains d1rmva_ A: Ribgrass mosaic virus                                                                                                                              SCOP domains
               CATH domains -1rmvA00 A:1-156  [code=1.20.120.70, no name defined]                                                                                                         CATH domains
               Pfam domains -TMV_coat-1rmvA01 A:1-145                                                                                                                         ----------- Pfam domains
         Sec.struct. author ...................hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...............ee.....hhhhhhhhhhhhh.......................hhhhhhhhhhhhhhhhhhhhhhhh...ee................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1RMV A   0 xSYNITNSNQYQYFAAVWAEPTPMLNQCVSALSQSYQTQAGRDTVRQQFANLLSTIVAPNQRFPDTGFRVYVNSAVIKPLYEALMKSFDTRNRIIETEEESRPSASEVANATQRVDDATVAIRSQIQLLLNELSNGHGYMNRAEFEAILPWTTAPAT 156
                            |        9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       
                            |                                                                                                                                                            
                            0-ACE                                                                                                                                                        


Chain B from PDB  Type:RNA  Length:3
                                   
                 1RMV B 165 GAA 167
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'