Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:251
 aligned with TTPA_HUMAN | P49638 from UniProtKB/Swiss-Prot  Length:278

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           TTPA_HUMAN    25 QPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISE 275
               SCOP domains d1oipa1 A:25-90 Alpha-tocopherol transfer protein                 d1oipa2 A:91-275 Alpha-tocopherol transfer protein                                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh..eee.........eeeeee.hhh.....hhhhhhhhhhhhhhhhh.hhhhhhhheeeeee....hhhhhhh.hhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhhhh....hhhhh....hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------W-----------------------------------------Q------------------T--------------------K------------------------------S-------------------H----------------------------W------------------------R----------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------CRAL_TRIO  PDB: A:88-253 UniProt: 88-253                                                                                                                              ---------------------- PROSITE
           Transcript 1 (1) Exon 1.1a  PDB: A:25-68 UniProt: 1-68       Exon 1.2  PDB: A:69-120 UniProt: 69-120             ----------------------------------------------------------------Exon 1.4  PDB: A:185-221             Exon 1.5  PDB: A:222-275 UniProt: 222-278 [INCOMPLETE] Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------Exon 1.3  PDB: A:120-184 UniProt: 120-184                        ------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1OIP A  25 QPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISE 275
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'