10 20 30 40 50 60 70 80 6GSX - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 26-JAN-96 6GSX
TITLE FIRST-SPHERE AND SECOND-SPHERE ELECTROSTATIC EFFECTS IN THE ACTIVE TITLE 2 SITE OF A CLASS MU GLUTATHIONE TRANSFERASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MU CLASS GLUTATHIONE S-TRANSFERASE OF ISOENZYME 3-3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RAT GST; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS RATTUS; SOURCE 3 ORGANISM_COMMON: BLACK RAT; SOURCE 4 ORGANISM_TAXID: 10117; SOURCE 5 ORGAN: LIVER; SOURCE 6 GENE: CDNA INSERT OF CLONE PGT33MX; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: M5219; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGT33MXY6F; SOURCE 11 EXPRESSION_SYSTEM_GENE: CDNA INSERT OF CLONE PGT33MX
KEYWDS GLUTATHIONE TRANSFERASE, ISOENZYME 3-3, Y6F MUTANT, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.XIAO,X.JI,R.N.ARMSTRONG,G.L.GILLILAND
REVDAT 3 13-JUL-11 6GSX 1 VERSN REVDAT 2 24-FEB-09 6GSX 1 VERSN REVDAT 1 08-NOV-96 6GSX 0
JRNL AUTH G.XIAO,S.LIU,X.JI,W.W.JOHNSON,J.CHEN,J.F.PARSONS, JRNL AUTH 2 W.J.STEVENS,G.L.GILLILAND,R.N.ARMSTRONG JRNL TITL FIRST-SPHERE AND SECOND-SPHERE ELECTROSTATIC EFFECTS IN THE JRNL TITL 2 ACTIVE SITE OF A CLASS MU GLUTHATHIONE TRANSFERASE. JRNL REF BIOCHEMISTRY V. 35 4753 1996 JRNL REFN ISSN 0006-2960 JRNL PMID 8664265 JRNL DOI 10.1021/BI960189K
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.JI,W.W.JOHNSON,M.A.SESAY,L.DICKERT,S.M.PRASAD,H.L.AMMON, REMARK 1 AUTH 2 R.N.ARMSTRONG,G.L.GILLILAND REMARK 1 TITL STRUCTURE AND FUNCTION OF THE XENOBIOTIC SUBSTRATE BINDING REMARK 1 TITL 2 SITE OF A GLUTATHIONE S-TRANSFERASE AS REVEALED BY X-RAY REMARK 1 TITL 3 CRYSTALLOGRAPHIC ANALYSIS OF PRODUCT COMPLEXES WITH THE REMARK 1 TITL 4 DIASTEREOMERS OF REMARK 1 TITL 5 9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE REMARK 1 REF BIOCHEMISTRY V. 33 1043 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH S.LIU,X.JI,G.L.GILLILAND,W.J.STEVENS,R.N.ARMSTRONG REMARK 1 TITL SECOND-SPHERE ELECTROSTATIC EFFECTS IN THE ACTIVE SITE OF REMARK 1 TITL 2 GLUTATHIONE S-TRANSFERASE. OBSERVATION OF AN ON-FACET REMARK 1 TITL 3 HYDROGEN BOND BETWEEN THE SIDE CHAIN OF THREONINE 13 AND THE REMARK 1 TITL 4 PI-CLOUD OF TYROSINE 6 AND ITS INFLUENCE ON CATALYSIS REMARK 1 REF J.AM.CHEM.SOC. V. 115 7910 1993 REMARK 1 REFN ISSN 0002-7863 REMARK 1 REFERENCE 3 REMARK 1 AUTH X.JI,R.N.ARMSTRONG,G.L.GILLILAND REMARK 1 TITL SNAPSHOTS ALONG THE REACTION COORDINATE OF AN SNAR REACTION REMARK 1 TITL 2 CATALYZED BY GLUTATHIONE TRANSFERASE REMARK 1 REF BIOCHEMISTRY V. 32 12949 1993 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH S.LIU,P.ZHANG,X.JI,W.W.JOHNSON,G.L.GILLILAND,R.N.ARMSTRONG REMARK 1 TITL CONTRIBUTION OF TYROSINE 6 TO THE CATALYTIC MECHANISM OF REMARK 1 TITL 2 ISOENZYME 3-3 OF GLUTATHIONE S-TRANSFERASE REMARK 1 REF J.BIOL.CHEM. V. 267 4296 1992 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 5 REMARK 1 AUTH X.JI,P.ZHANG,R.N.ARMSTRONG,G.L.GILLILAND REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF A GLUTATHIONE REMARK 1 TITL 2 S-TRANSFERASE FROM THE MU GENE CLASS. STRUCTURAL ANALYSIS OF REMARK 1 TITL 3 THE BINARY COMPLEX OF ISOENZYME 3-3 AND GLUTATHIONE AT 2.2-A REMARK 1 TITL 4 RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 31 10169 1992 REMARK 1 REFN ISSN 0006-2960
REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : GPRLSA REMARK 3 AUTHORS : FUREY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 29198 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3634 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 85 REMARK 3 SOLVENT ATOMS : 448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.018 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.037 ; 0.042 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.043 ; 0.040 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.023 ; 0.030 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.225 ; 0.200 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.196 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.196 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : 0.236 ; 0.300 REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 4.000 ; 5.000 REMARK 3 STAGGERED (DEGREES) : 17.700; 15.000 REMARK 3 TRANSVERSE (DEGREES) : 18.100; 15.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.953 ; 1.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.575 ; 1.500 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.779 ; 1.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.798 ; 2.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 6GSX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-94 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XENGEN REMARK 200 DATA SCALING SOFTWARE : XENGEN REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36475 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 2.550 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.92000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.61000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.92000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.61000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 472 LIES ON A SPECIAL POSITION.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 77 O HOH A 259 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 100 CD GLU B 100 OE2 -0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 29 CG - CD - OE2 ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG A 31 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP A 36 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 67 CD - NE - CZ ANGL. DEV. = -9.2 DEGREES REMARK 500 ARG A 77 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 77 NE - CZ - NH2 ANGL. DEV. = -7.1 DEGREES REMARK 500 ARG A 81 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 95 CD - NE - CZ ANGL. DEV. = 13.9 DEGREES REMARK 500 ARG A 95 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ASP A 105 CB - CG - OD1 ANGL. DEV. = 7.9 DEGREES REMARK 500 MET A 112 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 ARG A 144 CD - NE - CZ ANGL. DEV. = 18.7 DEGREES REMARK 500 ARG A 144 NH1 - CZ - NH2 ANGL. DEV. = -8.1 DEGREES REMARK 500 ARG A 144 NE - CZ - NH1 ANGL. DEV. = 7.6 DEGREES REMARK 500 ASP A 156 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU A 174 CB - CG - CD1 ANGL. DEV. = 11.6 DEGREES REMARK 500 ASP A 175 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 TYR A 202 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 10 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 10 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 17 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ILE B 16 O - C - N ANGL. DEV. = 13.7 DEGREES REMARK 500 SER B 26 CB - CA - C ANGL. DEV. = 13.9 DEGREES REMARK 500 ARG B 42 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG B 42 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP B 55 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG B 67 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 77 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG B 81 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 81 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG B 93 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 95 CD - NE - CZ ANGL. DEV. = 12.0 DEGREES REMARK 500 ASP B 97 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG B 107 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 GLU B 132 CB - CG - CD ANGL. DEV. = 16.5 DEGREES REMARK 500 ARG B 144 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 144 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 PHE B 157 CB - CG - CD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 186 CD - NE - CZ ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG B 186 NE - CZ - NH1 ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 186 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG B 201 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 8 49.80 -92.74 REMARK 500 TYR A 40 68.01 37.46 REMARK 500 GLN A 71 113.07 83.31 REMARK 500 PHE A 119 -61.09 -28.42 REMARK 500 TYR B 40 72.72 31.11 REMARK 500 GLN B 71 105.51 82.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 186 0.11 SIDE CHAIN REMARK 500 ARG A 201 0.10 SIDE CHAIN REMARK 500 ARG B 144 0.18 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU B 29 -10.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ILE A 130 23.6 L L OUTSIDE RANGE REMARK 500 CYS A 173 24.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 372 DISTANCE = 5.50 ANGSTROMS REMARK 525 HOH A 424 DISTANCE = 5.60 ANGSTROMS REMARK 525 HOH A 437 DISTANCE = 5.06 ANGSTROMS REMARK 525 HOH A 478 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH B 352 DISTANCE = 5.16 ANGSTROMS REMARK 525 HOH B 385 DISTANCE = 5.69 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GPS A 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GPS B 218
DBREF 6GSX A 1 217 UNP P04905 GSTM1_RAT 1 217 DBREF 6GSX B 1 217 UNP P04905 GSTM1_RAT 1 217
SEQADV 6GSX PHE A 6 UNP P04905 TYR 6 ENGINEERED SEQADV 6GSX PHE B 6 UNP P04905 TYR 6 ENGINEERED
SEQRES 1 A 217 PRO MET ILE LEU GLY PHE TRP ASN VAL ARG GLY LEU THR SEQRES 2 A 217 HIS PRO ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 A 217 TYR GLU GLU LYS ARG TYR ALA MET GLY ASP ALA PRO ASP SEQRES 4 A 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 A 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 A 217 SER ARG LYS ILE THR GLN SER ASN ALA ILE MET ARG TYR SEQRES 7 A 217 LEU ALA ARG LYS HIS HIS LEU CYS GLY GLU THR GLU GLU SEQRES 8 A 217 GLU ARG ILE ARG ALA ASP ILE VAL GLU ASN GLN VAL MET SEQRES 9 A 217 ASP ASN ARG MET GLN LEU ILE MET LEU CYS TYR ASN PRO SEQRES 10 A 217 ASP PHE GLU LYS GLN LYS PRO GLU PHE LEU LYS THR ILE SEQRES 11 A 217 PRO GLU LYS MET LYS LEU TYR SER GLU PHE LEU GLY LYS SEQRES 12 A 217 ARG PRO TRP PHE ALA GLY ASP LYS VAL THR TYR VAL ASP SEQRES 13 A 217 PHE LEU ALA TYR ASP ILE LEU ASP GLN TYR HIS ILE PHE SEQRES 14 A 217 GLU PRO LYS CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 A 217 PHE LEU ALA ARG PHE GLU GLY LEU LYS LYS ILE SER ALA SEQRES 16 A 217 TYR MET LYS SER SER ARG TYR LEU SER THR PRO ILE PHE SEQRES 17 A 217 SER LYS LEU ALA GLN TRP SER ASN LYS SEQRES 1 B 217 PRO MET ILE LEU GLY PHE TRP ASN VAL ARG GLY LEU THR SEQRES 2 B 217 HIS PRO ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 B 217 TYR GLU GLU LYS ARG TYR ALA MET GLY ASP ALA PRO ASP SEQRES 4 B 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 B 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 B 217 SER ARG LYS ILE THR GLN SER ASN ALA ILE MET ARG TYR SEQRES 7 B 217 LEU ALA ARG LYS HIS HIS LEU CYS GLY GLU THR GLU GLU SEQRES 8 B 217 GLU ARG ILE ARG ALA ASP ILE VAL GLU ASN GLN VAL MET SEQRES 9 B 217 ASP ASN ARG MET GLN LEU ILE MET LEU CYS TYR ASN PRO SEQRES 10 B 217 ASP PHE GLU LYS GLN LYS PRO GLU PHE LEU LYS THR ILE SEQRES 11 B 217 PRO GLU LYS MET LYS LEU TYR SER GLU PHE LEU GLY LYS SEQRES 12 B 217 ARG PRO TRP PHE ALA GLY ASP LYS VAL THR TYR VAL ASP SEQRES 13 B 217 PHE LEU ALA TYR ASP ILE LEU ASP GLN TYR HIS ILE PHE SEQRES 14 B 217 GLU PRO LYS CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 B 217 PHE LEU ALA ARG PHE GLU GLY LEU LYS LYS ILE SER ALA SEQRES 16 B 217 TYR MET LYS SER SER ARG TYR LEU SER THR PRO ILE PHE SEQRES 17 B 217 SER LYS LEU ALA GLN TRP SER ASN LYS
HET SO4 A 218 5 HET SO4 A 219 5 HET SO4 A 220 5 HET GPS A 221 35 HET GPS B 218 35
HETNAM SO4 SULFATE ION HETNAM GPS L-GAMMA-GLUTAMYL-S-[(9S,10S)-10-HYDROXY-9,10- HETNAM 2 GPS DIHYDROPHENANTHREN-9-YL]-L-CYSTEINYLGLYCINE
FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 GPS 2(C24 H27 N3 O7 S) FORMUL 8 HOH *448(H2 O)
HELIX 1 1 HIS A 14 TYR A 22 1 9 HELIX 2 2 SER A 43 LEU A 46 1 4 HELIX 3 3 SER A 72 HIS A 83 1 12 HELIX 4 4 GLU A 90 CYS A 114 1 25 HELIX 5 5 PHE A 119 LEU A 141 1 23 HELIX 6 6 TYR A 154 PHE A 169 1 16 HELIX 7 7 PRO A 178 GLU A 188 1 11 HELIX 8 8 LYS A 191 LYS A 198 1 8 HELIX 9 9 HIS B 14 TYR B 22 1 9 HELIX 10 10 SER B 43 LEU B 46 1 4 HELIX 11 11 SER B 72 LYS B 82 1 11 HELIX 12 12 GLU B 90 CYS B 114 1 25 HELIX 13 13 PHE B 119 LEU B 141 1 23 HELIX 14 14 TYR B 154 PHE B 169 1 16 HELIX 15 15 PRO B 178 GLU B 188 1 11 HELIX 16 16 LYS B 191 LYS B 198 1 8
SHEET 1 A 4 TYR A 27 TYR A 32 0 SHEET 2 A 4 MET A 2 TRP A 7 1 N MET A 2 O GLU A 28 SHEET 3 A 4 TYR A 61 ASP A 64 -1 N ILE A 63 O ILE A 3 SHEET 4 A 4 ARG A 67 THR A 70 -1 N ILE A 69 O LEU A 62 SHEET 1 B 4 TYR B 27 TYR B 32 0 SHEET 2 B 4 MET B 2 TRP B 7 1 N MET B 2 O GLU B 28 SHEET 3 B 4 TYR B 61 ASP B 64 -1 N ILE B 63 O ILE B 3 SHEET 4 B 4 ARG B 67 THR B 70 -1 N ILE B 69 O LEU B 62
CISPEP 1 ALA A 37 PRO A 38 0 6.12 CISPEP 2 LEU A 59 PRO A 60 0 -1.05 CISPEP 3 THR A 205 PRO A 206 0 2.62 CISPEP 4 ALA B 37 PRO B 38 0 4.59 CISPEP 5 LEU B 59 PRO B 60 0 1.67 CISPEP 6 THR B 205 PRO B 206 0 3.33
SITE 1 AC1 6 ASP A 105 GLN A 109 HOH A 278 HOH A 459 SITE 2 AC1 6 HOH A 468 GPS B 218 SITE 1 AC2 2 LYS A 49 HOH A 475 SITE 1 AC3 4 SER A 199 ARG A 201 HOH A 258 HOH A 423 SITE 1 AC4 23 TRP A 7 LEU A 12 ARG A 42 TRP A 45 SITE 2 AC4 23 LYS A 49 ASN A 58 LEU A 59 PRO A 60 SITE 3 AC4 23 GLN A 71 SER A 72 ARG A 107 ILE A 111 SITE 4 AC4 23 TYR A 115 SER A 209 HOH A 222 HOH A 227 SITE 5 AC4 23 HOH A 238 HOH A 320 HOH A 346 HOH A 390 SITE 6 AC4 23 HOH A 406 HOH A 452 ASP B 105 SITE 1 AC5 25 ASP A 105 SO4 A 218 HOH A 450 TRP B 7 SITE 2 AC5 25 GLY B 11 LEU B 12 ARG B 42 TRP B 45 SITE 3 AC5 25 LYS B 49 ASN B 58 LEU B 59 PRO B 60 SITE 4 AC5 25 GLN B 71 SER B 72 ILE B 111 TYR B 115 SITE 5 AC5 25 SER B 209 HOH B 219 HOH B 221 HOH B 244 SITE 6 AC5 25 HOH B 263 HOH B 279 HOH B 283 HOH B 375 SITE 7 AC5 25 HOH B 396
CRYST1 87.840 69.220 81.320 90.00 105.90 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011384 0.000000 0.003243 0.00000
SCALE2 0.000000 0.014447 0.000000 0.00000
SCALE3 0.000000 0.000000 0.012786 0.00000
MTRIX1 1 0.820650 -0.097810 0.563000 -6.43357 1
MTRIX2 1 -0.099830 -0.994630 -0.027270 31.69260 1
MTRIX3 1 0.562640 -0.033830 -0.826010 26.57442 1