10 20 30 40 50 60 70 80 5TO3 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 16-OCT-16 5TO3
TITLE CRYSTAL STRUCTURE OF THROMBIN MUTANT W215A/E217A FUSED TO EGF456 OF TITLE 2 THROMBOMODULIN VIA A 31-RESIDUE LINKER AND BOUND TO PPACK
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTHROMBIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COAGULATION FACTOR II; COMPND 5 EC: 3.4.21.5; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PROTHROMBIN,THROMBOMODULIN; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: COAGULATION FACTOR II,TM,FETOMODULIN; COMPND 11 EC: 3.4.21.5; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: F2; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: F2, THBD, THRM; SOURCE 13 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10029
KEYWDS HYDROLASE, AUTOACTIVATION, THROMBIN-THROMBOMODULIN FUSION PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR S.BARRANCO-MEDINA,M.MURPHY,L.PELC,Z.CHEN,E.DI CERA,N.POZZI
REVDAT 1 29-MAR-17 5TO3 0
JRNL AUTH S.BARRANCO-MEDINA,M.MURPHY,L.PELC,Z.CHEN,E.DI CERA,N.POZZI JRNL TITL RATIONAL DESIGN OF PROTEIN C ACTIVATORS. JRNL REF SCI REP V. 7 44596 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28294177 JRNL DOI 10.1038/SREP44596
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.FUENTES-PRIOR,Y.IWANAGA,R.HUBER,R.PAGILA,G.RUMENNIK, REMARK 1 AUTH 2 M.SETO,J.MORSER,D.R.LIGHT,W.BODE REMARK 1 TITL STRUCTURAL BASIS FOR THE ANTICOAGULANT ACTIVITY OF THE REMARK 1 TITL 2 THROMBIN-THROMBOMODULIN COMPLEX. REMARK 1 REF NATURE V. 404 518 2000 REMARK 1 REFN ISSN 0028-0836 REMARK 1 PMID 10761923 REMARK 1 DOI 10.1038/35006683
REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0085 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : -0.200 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 25770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1388 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.34 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.40 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1720 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3241 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 143 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.54000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : -0.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.280 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.227 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.226 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.512 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3501 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3160 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4730 ; 1.839 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7283 ; 0.991 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 406 ; 7.989 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;36.216 ;23.951 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 556 ;17.709 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;13.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 511 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3847 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 791 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1642 ; 1.988 ; 2.422 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1641 ; 1.955 ; 2.418 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2042 ; 3.160 ; 3.617 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2043 ; 3.159 ; 3.623 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1858 ; 3.563 ; 2.991 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1858 ; 3.560 ; 2.991 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2688 ; 5.149 ; 4.391 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3878 ; 7.736 ;20.714 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3864 ; 7.608 ;20.641 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 45 REMARK 3 ORIGIN FOR THE GROUP (A): -31.7670 33.2530 -20.1760 REMARK 3 T TENSOR REMARK 3 T11: 0.3696 T22: 0.0210 REMARK 3 T33: 0.3874 T12: 0.0438 REMARK 3 T13: -0.0071 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.7386 L22: 2.3611 REMARK 3 L33: 3.8033 L12: -1.5800 REMARK 3 L13: -1.0482 L23: 0.8283 REMARK 3 S TENSOR REMARK 3 S11: 0.2402 S12: -0.0360 S13: 0.5412 REMARK 3 S21: -0.2488 S22: 0.0398 S23: -0.0560 REMARK 3 S31: -0.6542 S32: -0.1803 S33: -0.2799 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 346 B 462 REMARK 3 ORIGIN FOR THE GROUP (A): -17.6690 -8.3750 -20.3610 REMARK 3 T TENSOR REMARK 3 T11: 0.4108 T22: 0.1449 REMARK 3 T33: 0.2048 T12: 0.0500 REMARK 3 T13: 0.0554 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 2.3019 L22: 4.9602 REMARK 3 L33: 1.4638 L12: -2.1033 REMARK 3 L13: 1.4514 L23: -2.4480 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: 0.1764 S13: 0.0541 REMARK 3 S21: -0.1586 S22: -0.2089 S23: -0.2200 REMARK 3 S31: 0.1519 S32: 0.2012 S33: 0.2339 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 16 B 276 REMARK 3 ORIGIN FOR THE GROUP (A): -24.2880 23.5610 -8.7610 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.0101 REMARK 3 T33: 0.0063 T12: -0.0120 REMARK 3 T13: -0.0194 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 1.7976 L22: 2.2443 REMARK 3 L33: 3.1442 L12: 0.0255 REMARK 3 L13: 0.7785 L23: 0.5290 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: -0.0618 S13: -0.0522 REMARK 3 S21: 0.1265 S22: -0.1060 S23: -0.0505 REMARK 3 S31: -0.0645 S32: 0.0394 S33: 0.0531 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS
REMARK 4 REMARK 4 5TO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224538.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27169 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.344 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -0.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : 0.10600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.41200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ID 1DX5 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES AND 20% PEG 8000, PH 7, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.42950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.42950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.46950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.08700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.46950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.08700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.42950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.46950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 81.08700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.42950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.46950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 81.08700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 46 REMARK 465 ARG A 47 REMARK 465 TRP B 163 REMARK 465 THR B 164 REMARK 465 ALA B 165 REMARK 465 ASN B 166 REMARK 465 VAL B 167 REMARK 465 GLY B 168 REMARK 465 SER B 318 REMARK 465 SER B 319 REMARK 465 ALA B 320 REMARK 465 GLY B 321 REMARK 465 GLY B 322 REMARK 465 GLY B 323 REMARK 465 SER B 324 REMARK 465 SER B 325 REMARK 465 SER B 326 REMARK 465 GLY B 327 REMARK 465 GLY B 328 REMARK 465 GLY B 329 REMARK 465 GLY B 330 REMARK 465 SER B 331 REMARK 465 SER B 332 REMARK 465 SER B 333 REMARK 465 ALA B 334 REMARK 465 GLY B 335 REMARK 465 GLY B 336 REMARK 465 GLY B 337 REMARK 465 SER B 338 REMARK 465 SER B 339 REMARK 465 SER B 340 REMARK 465 GLY B 341 REMARK 465 GLY B 342 REMARK 465 GLY B 343 REMARK 465 GLY B 344 REMARK 465 VAL B 345 REMARK 465 PRO B 450 REMARK 465 ASP B 451 REMARK 465 SER B 452 REMARK 465 ALA B 453 REMARK 465 LEU B 454 REMARK 465 ASP B 463 REMARK 465 SER B 464 REMARK 465 GLY B 465
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU B 440 O THR B 443 1.89 REMARK 500 OE2 GLU B 426 O HOH B 601 1.94 REMARK 500 OG SER B 220 O2 0G6 B 501 2.14 REMARK 500 ND2 ASN B 391 O5 NAG B 512 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 26 -79.79 -139.92 REMARK 500 TYR B 62 84.64 -157.58 REMARK 500 ASN B 68 84.33 -162.85 REMARK 500 HIS B 81 -60.88 -130.40 REMARK 500 ILE B 90 -59.99 -131.32 REMARK 500 GLU B 109 -56.78 -125.75 REMARK 500 HIS B 131 132.98 -174.48 REMARK 500 SER B 241 -64.22 -128.36 REMARK 500 LYS B 263 -54.72 -25.37 REMARK 500 TYR B 358 -75.81 -104.71 REMARK 500 LEU B 363 -65.78 -104.93 REMARK 500 PRO B 401 -71.64 -37.98 REMARK 500 ALA B 405 -160.40 174.49 REMARK 500 SER B 406 48.67 71.34 REMARK 500 THR B 443 -148.43 -144.25 REMARK 500 ASP B 461 -133.46 -88.00 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 683 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH B 684 DISTANCE = 7.19 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 503 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 248 O REMARK 620 2 LYS B 251 O 79.4 REMARK 620 3 HOH B 605 O 142.0 63.3 REMARK 620 4 HOH B 658 O 90.7 72.2 85.2 REMARK 620 5 HOH B 619 O 99.1 178.2 118.3 106.9 REMARK 620 6 HOH B 607 O 81.6 78.3 83.7 150.5 102.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 502 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 423 OD1 REMARK 620 2 ASP B 423 OD2 50.4 REMARK 620 3 ILE B 424 O 82.5 72.7 REMARK 620 4 GLU B 426 OE1 151.9 148.2 86.9 REMARK 620 5 GLU B 426 OE2 101.8 142.3 79.5 50.6 REMARK 620 6 ASN B 439 OD1 143.9 94.7 77.5 56.4 103.6 REMARK 620 7 LEU B 440 O 83.5 103.1 164.4 102.6 96.9 118.0 REMARK 620 8 THR B 443 O 118.3 144.8 142.5 59.8 66.4 95.3 43.1 REMARK 620 9 HOH B 601 O 58.0 106.4 84.4 95.2 44.9 146.6 82.5 82.3 REMARK 620 N 1 2 3 4 5 6 7 8
REMARK 630 REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE INHIBITOR REMARK 630 MOLECULE NAME: D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL] REMARK 630 AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 0G6 B 501 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: DPN PRO AR7 0QE REMARK 630 DETAILS: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0G6 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAG B 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG B 504 bound REMARK 800 to ASN B 68 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues NAG B REMARK 800 505 through BMA B 511
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DX5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE THROMBIN-THROMBOMODULIN COMPLEX
DBREF 5TO3 A 2 47 UNP P00734 THRB_HUMAN 318 363 DBREF 5TO3 B 16 273 UNP P00734 THRB_HUMAN 364 621 DBREF 5TO3 B 345 465 UNP P07204 TRBM_HUMAN 363 483
SEQADV 5TO3 ALA B 242 UNP P00734 TRP 590 ENGINEERED MUTATION SEQADV 5TO3 ALA B 244 UNP P00734 GLU 592 ENGINEERED MUTATION SEQADV 5TO3 GLY B 274 UNP P00734 LINKER SEQADV 5TO3 GLY B 275 UNP P00734 LINKER SEQADV 5TO3 SER B 276 UNP P00734 LINKER SEQADV 5TO3 SER B 318 UNP P00734 LINKER SEQADV 5TO3 SER B 319 UNP P00734 LINKER SEQADV 5TO3 ALA B 320 UNP P00734 LINKER SEQADV 5TO3 GLY B 321 UNP P00734 LINKER SEQADV 5TO3 GLY B 322 UNP P00734 LINKER SEQADV 5TO3 GLY B 323 UNP P00734 LINKER SEQADV 5TO3 SER B 324 UNP P00734 LINKER SEQADV 5TO3 SER B 325 UNP P00734 LINKER SEQADV 5TO3 SER B 326 UNP P00734 LINKER SEQADV 5TO3 GLY B 327 UNP P00734 LINKER SEQADV 5TO3 GLY B 328 UNP P00734 LINKER SEQADV 5TO3 GLY B 329 UNP P00734 LINKER SEQADV 5TO3 GLY B 330 UNP P00734 LINKER SEQADV 5TO3 SER B 331 UNP P00734 LINKER SEQADV 5TO3 SER B 332 UNP P00734 LINKER SEQADV 5TO3 SER B 333 UNP P00734 LINKER SEQADV 5TO3 ALA B 334 UNP P00734 LINKER SEQADV 5TO3 GLY B 335 UNP P00734 LINKER SEQADV 5TO3 GLY B 336 UNP P00734 LINKER SEQADV 5TO3 GLY B 337 UNP P00734 LINKER SEQADV 5TO3 SER B 338 UNP P00734 LINKER SEQADV 5TO3 SER B 339 UNP P00734 LINKER SEQADV 5TO3 SER B 340 UNP P00734 LINKER SEQADV 5TO3 GLY B 341 UNP P00734 LINKER SEQADV 5TO3 GLY B 342 UNP P00734 LINKER SEQADV 5TO3 GLY B 343 UNP P00734 LINKER SEQADV 5TO3 GLY B 344 UNP P00734 LINKER
SEQRES 1 A 46 SER GLU TYR GLN THR PHE PHE ASN PRO ARG THR PHE GLY SEQRES 2 A 46 SER GLY GLU ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU SEQRES 3 A 46 LYS LYS SER LEU GLU ASP LYS THR GLU ARG GLU LEU LEU SEQRES 4 A 46 GLU SER TYR ILE ASP GLY ARG SEQRES 1 B 409 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 B 409 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 B 409 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 B 409 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 B 409 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 B 409 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 B 409 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 B 409 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 B 409 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 B 409 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 B 409 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 B 409 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 B 409 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 B 409 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 B 409 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 B 409 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 B 409 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 B 409 MET GLY ILE VAL SER ALA GLY ALA GLY CYS ASP ARG ASP SEQRES 19 B 409 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 B 409 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLY GLY SEQRES 21 B 409 SER SER SER ALA GLY GLY GLY SER SER SER GLY GLY GLY SEQRES 22 B 409 GLY SER SER SER ALA GLY GLY GLY SER SER SER GLY GLY SEQRES 23 B 409 GLY GLY VAL GLU PRO VAL ASP PRO CYS PHE ARG ALA ASN SEQRES 24 B 409 CYS GLU TYR GLN CYS GLN PRO LEU ASN GLN THR SER TYR SEQRES 25 B 409 LEU CYS VAL CYS ALA GLU GLY PHE ALA PRO ILE PRO HIS SEQRES 26 B 409 GLU PRO HIS ARG CYS GLN MET PHE CYS ASN GLN THR ALA SEQRES 27 B 409 CYS PRO ALA ASP CYS ASP PRO ASN THR GLN ALA SER CYS SEQRES 28 B 409 GLU CYS PRO GLU GLY TYR ILE LEU ASP ASP GLY PHE ILE SEQRES 29 B 409 CYS THR ASP ILE ASP GLU CYS GLU ASN GLY GLY PHE CYS SEQRES 30 B 409 SER GLY VAL CYS HIS ASN LEU PRO GLY THR PHE GLU CYS SEQRES 31 B 409 ILE CYS GLY PRO ASP SER ALA LEU ALA ARG HIS ILE GLY SEQRES 32 B 409 THR ASP CYS ASP SER GLY
MODRES 5TO3 NAG B 504 NAG -D MODRES 5TO3 NAG B 505 NAG -D MODRES 5TO3 MAN B 507 MAN -D MODRES 5TO3 NAG B 510 NAG -D MODRES 5TO3 NAG B 512 NAG -D
HET 0G6 B 501 30 HET K B 502 1 HET NA B 503 1 HET NAG B 504 14 HET NAG B 505 14 HET BMA B 506 11 HET MAN B 507 11 HET BMA B 508 11 HET BMA B 509 11 HET NAG B 510 14 HET BMA B 511 11 HET NAG B 512 14
HETNAM 0G6 D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO) HETNAM 2 0G6 METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L- HETNAM 3 0G6 PROLINAMIDE HETNAM K POTASSIUM ION HETNAM NA SODIUM ION HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM BMA BETA-D-MANNOSE HETNAM MAN ALPHA-D-MANNOSE
HETSYN 0G6 PPACK
FORMUL 3 0G6 C21 H34 CL N6 O3 1+ FORMUL 4 K K 1+ FORMUL 5 NA NA 1+ FORMUL 6 NAG 4(C8 H15 N O6) FORMUL 7 BMA 4(C6 H12 O6) FORMUL 7 MAN C6 H12 O6 FORMUL 9 HOH *93(H2 O)
HELIX 1 AA1 ASN A 9 GLY A 14 1 6 HELIX 2 AA2 GLY A 16 CYS A 20 5 5 HELIX 3 AA3 PHE A 26 SER A 30 5 5 HELIX 4 AA4 THR A 35 ILE A 44 1 10 HELIX 5 AA5 ALA B 56 LEU B 60 1 5 HELIX 6 AA6 PRO B 63 ASP B 66 5 4 HELIX 7 AA7 THR B 70 ASN B 72 5 3 HELIX 8 AA8 ASP B 137 LEU B 145 1 9 HELIX 9 AA9 GLU B 184 SER B 191 1 8 HELIX 10 AB1 LYS B 206 GLY B 210 5 5 HELIX 11 AB2 LEU B 261 GLY B 273 1 13 HELIX 12 AB3 ASP B 349 ARG B 353 5 5 HELIX 13 AB4 ASP B 400 GLN B 404 5 5 HELIX 14 AB5 ASP B 425 GLY B 430 1 6
SHEET 1 AA1 8 SER B 20 ASP B 21 0 SHEET 2 AA1 8 GLN B 176 VAL B 183 -1 O VAL B 177 N SER B 20 SHEET 3 AA1 8 MET B 200 ALA B 203 -1 O CYS B 202 N VAL B 183 SHEET 4 AA1 8 GLY B 253 HIS B 257 -1 O TYR B 255 N PHE B 201 SHEET 5 AA1 8 TRP B 234 ALA B 242 -1 N ALA B 242 O PHE B 254 SHEET 6 AA1 8 PRO B 223 LYS B 227 -1 N MET B 226 O TYR B 235 SHEET 7 AA1 8 LYS B 150 GLY B 155 -1 N ARG B 152 O VAL B 225 SHEET 8 AA1 8 GLN B 176 VAL B 183 -1 O VAL B 178 N VAL B 153 SHEET 1 AA2 7 LYS B 92 SER B 94 0 SHEET 2 AA2 7 LEU B 74 ILE B 78 -1 N VAL B 76 O SER B 94 SHEET 3 AA2 7 GLN B 30 ARG B 35 -1 N PHE B 34 O LEU B 75 SHEET 4 AA2 7 GLU B 40 LEU B 47 -1 O LEU B 42 N LEU B 33 SHEET 5 AA2 7 TRP B 52 THR B 55 -1 O LEU B 54 N SER B 46 SHEET 6 AA2 7 ALA B 116 LEU B 120 -1 O MET B 118 N VAL B 53 SHEET 7 AA2 7 LEU B 96 ILE B 101 -1 N GLU B 97 O LYS B 119 SHEET 1 AA3 2 LEU B 61 TYR B 62 0 SHEET 2 AA3 2 LYS B 67 ASN B 68 -1 O LYS B 67 N TYR B 62 SHEET 1 AA4 2 GLN B 359 PRO B 362 0 SHEET 2 AA4 2 TYR B 368 VAL B 371 -1 O VAL B 371 N GLN B 359 SHEET 1 AA5 2 PHE B 376 ILE B 379 0 SHEET 2 AA5 2 GLU B 382 MET B 388 -1 O GLU B 382 N ILE B 379 SHEET 1 AA6 3 ALA B 394 PRO B 396 0 SHEET 2 AA6 3 ILE B 420 ASP B 423 -1 O CYS B 421 N CYS B 395 SHEET 3 AA6 3 TYR B 413 ASP B 416 -1 N ILE B 414 O THR B 422 SHEET 1 AA7 3 VAL B 436 LEU B 440 0 SHEET 2 AA7 3 THR B 443 ILE B 447 -1 O GLU B 445 N HIS B 438 SHEET 3 AA7 3 ARG B 456 ILE B 458 -1 O HIS B 457 N CYS B 446
SSBOND 1 CYS A 20 CYS B 134 1555 1555 2.10 SSBOND 2 CYS B 43 CYS B 59 1555 1555 2.06 SSBOND 3 CYS B 188 CYS B 202 1555 1555 2.07 SSBOND 4 CYS B 216 CYS B 246 1555 1555 2.08 SSBOND 5 CYS B 351 CYS B 360 1555 1555 2.15 SSBOND 6 CYS B 356 CYS B 370 1555 1555 2.11 SSBOND 7 CYS B 372 CYS B 386 1555 1555 2.09 SSBOND 8 CYS B 390 CYS B 395 1555 1555 2.04 SSBOND 9 CYS B 399 CYS B 407 1555 1555 2.09 SSBOND 10 CYS B 409 CYS B 421 1555 1555 2.09 SSBOND 11 CYS B 427 CYS B 437 1555 1555 2.07 SSBOND 12 CYS B 433 CYS B 446 1555 1555 2.07 SSBOND 13 CYS B 448 CYS B 462 1555 1555 2.06
LINK NE2 HIS B 58 C3 0G6 B 501 1555 1555 1.29 LINK ND2 ASN B 68 C1 NAG B 504 1555 1555 1.45 LINK OG SER B 220 C2 0G6 B 501 1555 1555 1.33 LINK O ARG B 248 NA NA B 503 1555 1555 2.53 LINK O LYS B 251 NA NA B 503 1555 1555 2.64 LINK ND2 ASN B 364 C1 NAG B 505 1555 1555 1.48 LINK ND2 ASN B 391 C1 NAG B 512 1555 1555 1.47 LINK OD1 ASP B 423 K K B 502 1555 1555 2.55 LINK OD2 ASP B 423 K K B 502 1555 1555 2.58 LINK O ILE B 424 K K B 502 1555 1555 2.05 LINK OE1 GLU B 426 K K B 502 1555 1555 2.56 LINK OE2 GLU B 426 K K B 502 1555 1555 2.59 LINK OD1 ASN B 439 K K B 502 1555 1555 2.54 LINK O LEU B 440 K K B 502 1555 1555 2.48 LINK O THR B 443 K K B 502 1555 1555 2.65 LINK K K B 502 O HOH B 601 1555 1555 2.49 LINK NA NA B 503 O HOH B 605 1555 1555 2.25 LINK NA NA B 503 O HOH B 658 1555 1555 2.43 LINK NA NA B 503 O HOH B 619 1555 1555 2.46 LINK NA NA B 503 O HOH B 607 1555 1555 2.92 LINK O4 NAG B 505 C1 BMA B 506 1555 1555 1.47 LINK O4 BMA B 506 C1 MAN B 507 1555 1555 1.47 LINK O6 BMA B 506 C1 BMA B 511 1555 1555 1.45 LINK O4 MAN B 507 C1 BMA B 508 1555 1555 1.46 LINK O4 BMA B 508 C1 BMA B 509 1555 1555 1.44 LINK O4 BMA B 509 C1 NAG B 510 1555 1555 1.46
CISPEP 1 SER B 37 PRO B 38 0 -9.01
SITE 1 AC1 15 HIS B 58 TYR B 62 TRP B 65 ASP B 214 SITE 2 AC1 15 ALA B 215 GLU B 217 GLY B 218 SER B 220 SITE 3 AC1 15 SER B 241 ALA B 242 GLY B 243 GLY B 245 SITE 4 AC1 15 GLY B 253 TYR B 358 GLN B 359 SITE 1 AC2 7 ASP B 423 ILE B 424 GLU B 426 ASN B 439 SITE 2 AC2 7 LEU B 440 THR B 443 HOH B 601 SITE 1 AC3 6 ARG B 248 LYS B 251 HOH B 605 HOH B 607 SITE 2 AC3 6 HOH B 619 HOH B 658 SITE 1 AC4 2 PHE B 389 ASN B 391 SITE 1 AC5 1 ASN B 68 SITE 1 AC6 8 ASN B 364 THR B 366 SER B 367 TYR B 368 SITE 2 AC6 8 HOH B 602 HOH B 613 HOH B 618 HOH B 640
CRYST1 62.939 162.174 128.859 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015888 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006166 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007760 0.00000