10 20 30 40 50 60 70 80 5IIA - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CELL ADHESION 01-MAR-16 5IIA
TITLE CRYSTAL STRUCTURE OF RED ABALONE EGG VERL REPEAT 3 IN COMPLEX WITH TITLE 2 SPERM LYSIN AT 1.7 A RESOLUTION (CRYSTAL FORM I)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: EGG-LYSIN; COMPND 3 CHAIN: A, C, E, G; COMPND 4 SYNONYM: SPERM-LYSIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: VITELLINE ENVELOPE SPERM LYSIN RECEPTOR; COMPND 8 CHAIN: B, D, F, H; COMPND 9 FRAGMENT: UNP RESIDUES 340-453; COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALIOTIS RUFESCENS; SOURCE 3 ORGANISM_COMMON: CALIFORNIA RED ABALONE; SOURCE 4 ORGANISM_TAXID: 6454; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK-293S; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PHLSEC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HALIOTIS RUFESCENS; SOURCE 13 ORGANISM_COMMON: CALIFORNIA RED ABALONE; SOURCE 14 ORGANISM_TAXID: 6454; SOURCE 15 GENE: VERL; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM_CELL_LINE: HEK-293S; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_VECTOR: PHLSEC
KEYWDS CELL ADHESION, FERTILIZATION, EGG-SPERM INTERACTION, GAMETE KEYWDS 2 RECOGNITION, SPERM RECEPTOR, EGG COAT, VITELLINE ENVELOPE, ZP KEYWDS 3 DOMAIN, ZP-N DOMAIN, SPERM ACROSOME, EGG COAT PENETRATION
EXPDTA X-RAY DIFFRACTION
AUTHOR H.SADAT AL-HOSSEINI,I.RAJ,K.NISHIMURA,D.DE SANCTIS,L.JOVINE
REVDAT 2 28-JUN-17 5IIA 1 JRNL REVDAT 1 14-JUN-17 5IIA 0
JRNL AUTH I.RAJ,H.SADAT AL HOSSEINI,E.DIOGUARDI,K.NISHIMURA,L.HAN, JRNL AUTH 2 A.VILLA,D.DE SANCTIS,L.JOVINE JRNL TITL STRUCTURAL BASIS OF EGG COAT-SPERM RECOGNITION AT JRNL TITL 2 FERTILIZATION. JRNL REF CELL V. 169 1315 2017 JRNL REFN ISSN 1097-4172 JRNL PMID 28622512 JRNL DOI 10.1016/J.CELL.2017.05.033
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.J.SWANSON,J.E.AAGAARD,V.D.VACQUIER,M.MONNE, REMARK 1 AUTH 2 H.SADAT AL HOSSEINI,L.JOVINE REMARK 1 TITL THE MOLECULAR BASIS OF SEX: LINKING YEAST TO HUMAN. REMARK 1 REF MOL. BIOL. EVOL. V. 28 1963 2011 REMARK 1 REFN ESSN 1537-1719 REMARK 1 PMID 21282709 REMARK 1 DOI 10.1093/MOLBEV/MSR026 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.E.AAGAARD,X.YI,M.J.MACCOSS,W.J.SWANSON REMARK 1 TITL RAPIDLY EVOLVING ZONA PELLUCIDA DOMAIN PROTEINS ARE A MAJOR REMARK 1 TITL 2 COMPONENT OF THE VITELLINE ENVELOPE OF ABALONE EGGS. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 103 17302 2006 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 17085584 REMARK 1 REFERENCE 3 REMARK 1 AUTH B.E.GALINDO,G.W.MOY,W.J.SWANSON,V.D.VACQUIER REMARK 1 TITL FULL-LENGTH SEQUENCE OF VERL, THE EGG VITELLINE ENVELOPE REMARK 1 TITL 2 RECEPTOR FOR ABALONE SPERM LYSIN. REMARK 1 REF GENE V. 288 111 2002 REMARK 1 REFN ISSN 0378-1119 REMARK 1 PMID 12034500 REMARK 1 REFERENCE 4 REMARK 1 AUTH N.KRESGE,V.D.VACQUIER,C.D.STOUT REMARK 1 TITL 1.35 AND 2.07 A RESOLUTION STRUCTURES OF THE RED ABALONE REMARK 1 TITL 2 SPERM LYSIN MONOMER AND DIMER REVEAL FEATURES INVOLVED IN REMARK 1 TITL 3 RECEPTOR BINDING. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 56 34 2000 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 10666624 REMARK 1 REFERENCE 5 REMARK 1 AUTH W.J.SWANSON,V.D.VACQUIER REMARK 1 TITL THE ABALONE EGG VITELLINE ENVELOPE RECEPTOR FOR SPERM LYSIN REMARK 1 TITL 2 IS A GIANT MULTIVALENT MOLECULE. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 94 6724 1997 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 9192632 REMARK 1 REFERENCE 6 REMARK 1 AUTH A.SHAW,P.A.FORTES,C.D.STOUT,V.D.VACQUIER REMARK 1 TITL CRYSTAL STRUCTURE AND SUBUNIT DYNAMICS OF THE ABALONE SPERM REMARK 1 TITL 2 LYSIN DIMER: EGG ENVELOPES DISSOCIATE DIMERS, THE MONOMER IS REMARK 1 TITL 3 THE ACTIVE SPECIES. REMARK 1 REF J. CELL BIOL. V. 130 1117 1995 REMARK 1 REFN ISSN 0021-9525 REMARK 1 PMID 7657696 REMARK 1 REFERENCE 7 REMARK 1 AUTH A.SHAW,D.E.MCREE,V.D.VACQUIER,C.D.STOUT REMARK 1 TITL THE CRYSTAL STRUCTURE OF LYSIN, A FERTILIZATION PROTEIN. REMARK 1 REF SCIENCE V. 262 1864 1993 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 8266073
REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2689: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 119230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.190 REMARK 3 FREE R VALUE TEST SET COUNT : 3799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6753 - 5.0982 0.98 4303 140 0.1666 0.1688 REMARK 3 2 5.0982 - 4.0472 0.99 4345 147 0.1202 0.1345 REMARK 3 3 4.0472 - 3.5358 0.98 4327 140 0.1495 0.1917 REMARK 3 4 3.5358 - 3.2126 0.99 4345 137 0.1637 0.1952 REMARK 3 5 3.2126 - 2.9824 0.99 4319 143 0.1758 0.2239 REMARK 3 6 2.9824 - 2.8066 0.99 4376 147 0.1801 0.2291 REMARK 3 7 2.8066 - 2.6660 0.99 4295 137 0.1836 0.2373 REMARK 3 8 2.6660 - 2.5500 0.97 4264 150 0.1822 0.2015 REMARK 3 9 2.5500 - 2.4518 0.98 4350 142 0.1882 0.2167 REMARK 3 10 2.4518 - 2.3672 0.98 4294 137 0.1716 0.1843 REMARK 3 11 2.3672 - 2.2932 0.98 4303 143 0.1713 0.1881 REMARK 3 12 2.2932 - 2.2276 0.98 4245 142 0.1758 0.1991 REMARK 3 13 2.2276 - 2.1690 0.97 4302 129 0.1757 0.2176 REMARK 3 14 2.1690 - 2.1161 0.98 4325 149 0.1897 0.2213 REMARK 3 15 2.1161 - 2.0680 0.97 4191 134 0.2020 0.2291 REMARK 3 16 2.0680 - 2.0240 0.97 4277 140 0.2218 0.2380 REMARK 3 17 2.0240 - 1.9835 0.95 4239 143 0.2443 0.2884 REMARK 3 18 1.9835 - 1.9460 0.96 4158 139 0.2645 0.2684 REMARK 3 19 1.9460 - 1.9113 0.97 4252 143 0.2792 0.3333 REMARK 3 20 1.9113 - 1.8789 0.97 4273 136 0.2903 0.3117 REMARK 3 21 1.8789 - 1.8486 0.97 4246 138 0.3074 0.3486 REMARK 3 22 1.8486 - 1.8201 0.97 4240 141 0.3283 0.3561 REMARK 3 23 1.8201 - 1.7934 0.97 4250 145 0.3469 0.3430 REMARK 3 24 1.7934 - 1.7681 0.97 4228 140 0.3623 0.4033 REMARK 3 25 1.7681 - 1.7442 0.97 4205 142 0.3742 0.4136 REMARK 3 26 1.7442 - 1.7216 0.96 4227 139 0.3875 0.3448 REMARK 3 27 1.7216 - 1.7000 0.96 4252 136 0.4108 0.3961 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7887 REMARK 3 ANGLE : 1.128 10698 REMARK 3 CHIRALITY : 0.052 1176 REMARK 3 PLANARITY : 0.007 1332 REMARK 3 DIHEDRAL : 12.272 2988 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 19.0258 26.5253 36.2997 REMARK 3 T TENSOR REMARK 3 T11: 0.3108 T22: 0.3234 REMARK 3 T33: 0.3036 T12: 0.0095 REMARK 3 T13: 0.0043 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.5803 L22: 1.6060 REMARK 3 L33: 1.5248 L12: 0.2133 REMARK 3 L13: 0.8671 L23: 0.4320 REMARK 3 S TENSOR REMARK 3 S11: 0.0148 S12: 0.0400 S13: 0.1131 REMARK 3 S21: 0.0008 S22: -0.0194 S23: -0.0579 REMARK 3 S31: -0.0279 S32: -0.0316 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 35.7128 19.6463 27.7650 REMARK 3 T TENSOR REMARK 3 T11: 0.3498 T22: 0.3859 REMARK 3 T33: 0.3558 T12: -0.0066 REMARK 3 T13: 0.0049 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 2.9008 L22: 1.5952 REMARK 3 L33: 2.2194 L12: -1.0471 REMARK 3 L13: -0.9887 L23: 0.3412 REMARK 3 S TENSOR REMARK 3 S11: 0.0593 S12: 0.1405 S13: 0.1617 REMARK 3 S21: -0.0331 S22: -0.0265 S23: -0.0892 REMARK 3 S31: -0.0658 S32: 0.0104 S33: 0.0007 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 59.8318 0.1856 0.5327 REMARK 3 T TENSOR REMARK 3 T11: 0.3336 T22: 0.3249 REMARK 3 T33: 0.3058 T12: -0.0029 REMARK 3 T13: 0.0267 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.9907 L22: 2.0264 REMARK 3 L33: 2.5396 L12: 0.3074 REMARK 3 L13: 0.1312 L23: 1.0521 REMARK 3 S TENSOR REMARK 3 S11: -0.0864 S12: 0.1125 S13: -0.0786 REMARK 3 S21: 0.0583 S22: -0.0066 S23: 0.1004 REMARK 3 S31: 0.1266 S32: -0.0808 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 50.1302 10.3427 15.4727 REMARK 3 T TENSOR REMARK 3 T11: 0.3611 T22: 0.4229 REMARK 3 T33: 0.4004 T12: -0.0297 REMARK 3 T13: 0.0349 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.8408 L22: 1.6217 REMARK 3 L33: 2.9609 L12: -0.7030 REMARK 3 L13: -0.8236 L23: 1.0518 REMARK 3 S TENSOR REMARK 3 S11: -0.1382 S12: 0.0822 S13: -0.0676 REMARK 3 S21: 0.1302 S22: -0.0261 S23: 0.1172 REMARK 3 S31: 0.2089 S32: -0.1016 S33: -0.0023 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN E AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): -4.9916 6.1069 80.7613 REMARK 3 T TENSOR REMARK 3 T11: 0.3997 T22: 0.3562 REMARK 3 T33: 0.3426 T12: -0.0117 REMARK 3 T13: 0.0125 T23: 0.0294 REMARK 3 L TENSOR REMARK 3 L11: 2.2599 L22: 2.0013 REMARK 3 L33: 2.5498 L12: -0.2718 REMARK 3 L13: 1.0007 L23: -0.5243 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: -0.0995 S13: 0.0005 REMARK 3 S21: 0.0080 S22: -0.1229 S23: -0.1364 REMARK 3 S31: 0.0247 S32: 0.1474 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN F AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): -5.9255 19.8375 65.9527 REMARK 3 T TENSOR REMARK 3 T11: 0.4552 T22: 0.3887 REMARK 3 T33: 0.3720 T12: 0.0024 REMARK 3 T13: 0.0478 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.8797 L22: 2.7065 REMARK 3 L33: 2.9194 L12: 0.1844 REMARK 3 L13: -0.8012 L23: -0.9830 REMARK 3 S TENSOR REMARK 3 S11: 0.0708 S12: 0.0616 S13: 0.1053 REMARK 3 S21: -0.1196 S22: -0.0757 S23: -0.0978 REMARK 3 S31: 0.0433 S32: 0.0720 S33: -0.0002 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN G AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): 4.0557 52.9563 44.6587 REMARK 3 T TENSOR REMARK 3 T11: 0.3767 T22: 0.3268 REMARK 3 T33: 0.3424 T12: 0.0210 REMARK 3 T13: 0.0130 T23: 0.0295 REMARK 3 L TENSOR REMARK 3 L11: 1.9779 L22: 3.5264 REMARK 3 L33: 1.5156 L12: 0.3875 REMARK 3 L13: 0.4800 L23: 0.1732 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: -0.0420 S13: -0.0015 REMARK 3 S21: 0.3052 S22: 0.0736 S23: 0.0610 REMARK 3 S31: -0.0614 S32: -0.0428 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN H AND NOT RESNAME HOH REMARK 3 ORIGIN FOR THE GROUP (A): -2.3534 35.8536 53.2476 REMARK 3 T TENSOR REMARK 3 T11: 0.4633 T22: 0.3802 REMARK 3 T33: 0.3663 T12: 0.0360 REMARK 3 T13: 0.0580 T23: 0.0430 REMARK 3 L TENSOR REMARK 3 L11: 2.2254 L22: 2.7155 REMARK 3 L33: 2.0954 L12: 0.3295 REMARK 3 L13: -0.7132 L23: -1.2270 REMARK 3 S TENSOR REMARK 3 S11: 0.0349 S12: 0.0096 S13: 0.0939 REMARK 3 S21: 0.3322 S22: 0.1051 S23: 0.1804 REMARK 3 S31: -0.0169 S32: -0.0772 S33: 0.0042 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 5IIA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000218190.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97239 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20141118 REMARK 200 DATA SCALING SOFTWARE : XDS 20141118 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122478 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.655 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.04912 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 1.76500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.790 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2LIS REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2 M DI-AMMONIUM REMARK 280 CITRATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 19 REMARK 465 SER A 20 REMARK 465 TRP A 21 REMARK 465 HIS A 22 REMARK 465 TYR A 23 REMARK 465 VAL A 24 REMARK 465 GLU A 25 REMARK 465 PRO A 26 REMARK 465 LYS A 27 REMARK 465 GLY A 153 REMARK 465 LYS A 154 REMARK 465 ALA B 333 REMARK 465 GLN B 334 REMARK 465 THR B 335 REMARK 465 ASN B 336 REMARK 465 ALA B 337 REMARK 465 SER B 362 REMARK 465 LYS B 363 REMARK 465 ASP B 364 REMARK 465 GLN B 365 REMARK 465 PRO B 449 REMARK 465 VAL B 450 REMARK 465 ALA B 451 REMARK 465 PRO B 452 REMARK 465 LYS B 453 REMARK 465 LEU B 454 REMARK 465 GLU B 455 REMARK 465 HIS B 456 REMARK 465 HIS B 457 REMARK 465 HIS B 458 REMARK 465 HIS B 459 REMARK 465 HIS B 460 REMARK 465 HIS B 461 REMARK 465 ARG C 19 REMARK 465 SER C 20 REMARK 465 TRP C 21 REMARK 465 HIS C 22 REMARK 465 TYR C 23 REMARK 465 VAL C 24 REMARK 465 GLU C 25 REMARK 465 PRO C 26 REMARK 465 LYS C 27 REMARK 465 GLY C 153 REMARK 465 LYS C 154 REMARK 465 ALA D 333 REMARK 465 GLN D 334 REMARK 465 THR D 335 REMARK 465 ASN D 336 REMARK 465 VAL D 360 REMARK 465 THR D 361 REMARK 465 SER D 362 REMARK 465 LYS D 363 REMARK 465 ASP D 364 REMARK 465 PRO D 449 REMARK 465 VAL D 450 REMARK 465 ALA D 451 REMARK 465 PRO D 452 REMARK 465 LYS D 453 REMARK 465 LEU D 454 REMARK 465 GLU D 455 REMARK 465 HIS D 456 REMARK 465 HIS D 457 REMARK 465 HIS D 458 REMARK 465 HIS D 459 REMARK 465 HIS D 460 REMARK 465 HIS D 461 REMARK 465 ARG E 19 REMARK 465 SER E 20 REMARK 465 TRP E 21 REMARK 465 HIS E 22 REMARK 465 TYR E 23 REMARK 465 VAL E 24 REMARK 465 GLU E 25 REMARK 465 PRO E 26 REMARK 465 LYS E 27 REMARK 465 GLY E 153 REMARK 465 LYS E 154 REMARK 465 ALA F 333 REMARK 465 GLN F 334 REMARK 465 THR F 335 REMARK 465 ASN F 336 REMARK 465 ALA F 337 REMARK 465 ALA F 338 REMARK 465 THR F 361 REMARK 465 SER F 362 REMARK 465 LYS F 363 REMARK 465 ASP F 364 REMARK 465 GLN F 365 REMARK 465 PRO F 449 REMARK 465 VAL F 450 REMARK 465 ALA F 451 REMARK 465 PRO F 452 REMARK 465 LYS F 453 REMARK 465 LEU F 454 REMARK 465 GLU F 455 REMARK 465 HIS F 456 REMARK 465 HIS F 457 REMARK 465 HIS F 458 REMARK 465 HIS F 459 REMARK 465 HIS F 460 REMARK 465 HIS F 461 REMARK 465 ARG G 19 REMARK 465 SER G 20 REMARK 465 TRP G 21 REMARK 465 HIS G 22 REMARK 465 TYR G 23 REMARK 465 VAL G 24 REMARK 465 GLU G 25 REMARK 465 PRO G 26 REMARK 465 GLY G 153 REMARK 465 LYS G 154 REMARK 465 ALA H 333 REMARK 465 GLN H 334 REMARK 465 THR H 335 REMARK 465 ASN H 336 REMARK 465 ALA H 337 REMARK 465 ALA H 338 REMARK 465 ALA H 339 REMARK 465 VAL H 360 REMARK 465 THR H 361 REMARK 465 SER H 362 REMARK 465 LYS H 363 REMARK 465 ASP H 364 REMARK 465 GLN H 365 REMARK 465 SER H 448 REMARK 465 PRO H 449 REMARK 465 VAL H 450 REMARK 465 ALA H 451 REMARK 465 PRO H 452 REMARK 465 LYS H 453 REMARK 465 LEU H 454 REMARK 465 GLU H 455 REMARK 465 HIS H 456 REMARK 465 HIS H 457 REMARK 465 HIS H 458 REMARK 465 HIS H 459 REMARK 465 HIS H 460 REMARK 465 HIS H 461
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP D 348 HG SER D 350 1.58 REMARK 500 ND2 ASN F 373 O5 NAG F 501 2.16 REMARK 500 ND2 ASN B 373 O5 NAG B 501 2.19 REMARK 500 ND2 ASN D 373 O5 NAG D 501 2.19 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG B 501 bound REMARK 800 to ASN B 373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG B 502 bound REMARK 800 to ASN B 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG D 501 bound REMARK 800 to ASN D 373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG D 502 bound REMARK 800 to ASN D 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG F 501 bound REMARK 800 to ASN F 373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG F 502 bound REMARK 800 to ASN F 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG H 501 bound REMARK 800 to ASN H 373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Mono-Saccharide NAG H 502 bound REMARK 800 to ASN H 417
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LIS RELATED DB: PDB REMARK 900 RELATED ID: 2LIS RELATED DB: PDB REMARK 900 RELATED ID: 1LYN RELATED DB: PDB REMARK 900 RELATED ID: 2LYN RELATED DB: PDB REMARK 900 RELATED ID: 3D4C RELATED DB: PDB REMARK 900 RELATED ID: 3D4G RELATED DB: PDB REMARK 900 RELATED ID: 3EF7 RELATED DB: PDB REMARK 900 RELATED ID: 3NK3 RELATED DB: PDB REMARK 900 RELATED ID: 3NK4 RELATED DB: PDB REMARK 900 RELATED ID: D_1000218079 RELATED DB: PDB REMARK 900 RELATED ENTRY UNDER SUBMISSION REMARK 900 RELATED ID: D_1000218080 RELATED DB: PDB REMARK 900 RELATED ENTRY UNDER SUBMISSION REMARK 900 RELATED ID: D_1000218081 RELATED DB: PDB REMARK 900 RELATED ENTRY UNDER SUBMISSION REMARK 900 RELATED ID: D_1000218044 RELATED DB: PDB REMARK 900 RELATED ENTRY UNDER SUBMISSION REMARK 900 RELATED ID: D_1000218048 RELATED DB: PDB REMARK 900 RELATED ENTRY UNDER SUBMISSION REMARK 900 RELATED ID: D_1000218050 RELATED DB: PDB REMARK 900 RELATED ENTRY UNDER SUBMISSION REMARK 900 RELATED ID: D_1000218323 RELATED DB: PDB REMARK 900 RELATED ENTRY UNDER SUBMISSION
DBREF 5IIA A 19 154 UNP P04552 ELYS_HALRU 19 154 DBREF 5IIA B 340 453 UNP Q8WR62 Q8WR62_HALRU 340 453 DBREF 5IIA C 19 154 UNP P04552 ELYS_HALRU 19 154 DBREF 5IIA D 340 453 UNP Q8WR62 Q8WR62_HALRU 340 453 DBREF 5IIA E 19 154 UNP P04552 ELYS_HALRU 19 154 DBREF 5IIA F 340 453 UNP Q8WR62 Q8WR62_HALRU 340 453 DBREF 5IIA G 19 154 UNP P04552 ELYS_HALRU 19 154 DBREF 5IIA H 340 453 UNP Q8WR62 Q8WR62_HALRU 340 453
SEQADV 5IIA ALA B 333 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLN B 334 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA THR B 335 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ASN B 336 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA B 337 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA B 338 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA B 339 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA LEU B 454 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLU B 455 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS B 456 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS B 457 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS B 458 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS B 459 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS B 460 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS B 461 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA D 333 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLN D 334 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA THR D 335 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ASN D 336 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA D 337 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA D 338 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA D 339 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA LEU D 454 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLU D 455 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS D 456 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS D 457 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS D 458 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS D 459 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS D 460 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS D 461 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA F 333 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLN F 334 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA THR F 335 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ASN F 336 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA F 337 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA F 338 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA F 339 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA LEU F 454 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLU F 455 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS F 456 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS F 457 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS F 458 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS F 459 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS F 460 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS F 461 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA H 333 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLN H 334 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA THR H 335 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ASN H 336 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA H 337 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA H 338 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA ALA H 339 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA LEU H 454 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA GLU H 455 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS H 456 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS H 457 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS H 458 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS H 459 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS H 460 UNP Q8WR62 EXPRESSION TAG SEQADV 5IIA HIS H 461 UNP Q8WR62 EXPRESSION TAG
SEQRES 1 A 136 ARG SER TRP HIS TYR VAL GLU PRO LYS PHE LEU ASN LYS SEQRES 2 A 136 ALA PHE GLU VAL ALA LEU LYS VAL GLN ILE ILE ALA GLY SEQRES 3 A 136 PHE ASP ARG GLY LEU VAL LYS TRP LEU ARG VAL HIS GLY SEQRES 4 A 136 ARG THR LEU SER THR VAL GLN LYS LYS ALA LEU TYR PHE SEQRES 5 A 136 VAL ASN ARG ARG TYR MET GLN THR HIS TRP ALA ASN TYR SEQRES 6 A 136 MET LEU TRP ILE ASN LYS LYS ILE ASP ALA LEU GLY ARG SEQRES 7 A 136 THR PRO VAL VAL GLY ASP TYR THR ARG LEU GLY ALA GLU SEQRES 8 A 136 ILE GLY ARG ARG ILE ASP MET ALA TYR PHE TYR ASP PHE SEQRES 9 A 136 LEU LYS ASP LYS ASN MET ILE PRO LYS TYR LEU PRO TYR SEQRES 10 A 136 MET GLU GLU ILE ASN ARG MET ARG PRO ALA ASP VAL PRO SEQRES 11 A 136 VAL LYS TYR MET GLY LYS SEQRES 1 B 129 ALA GLN THR ASN ALA ALA ALA ASP TRP ASP VAL TYR CYS SEQRES 2 B 129 SER GLN ASP GLU SER ILE PRO ALA LYS PHE ILE SER ARG SEQRES 3 B 129 LEU VAL THR SER LYS ASP GLN ALA LEU GLU LYS THR GLU SEQRES 4 B 129 ILE ASN CYS SER ASN GLY LEU VAL PRO ILE THR GLN GLU SEQRES 5 B 129 PHE GLY ILE ASN MET MET LEU ILE GLN TYR THR ARG ASN SEQRES 6 B 129 GLU LEU LEU ASP SER PRO GLY MET CYS VAL PHE TRP GLY SEQRES 7 B 129 PRO TYR SER VAL PRO LYS ASN ASP THR VAL VAL LEU TYR SEQRES 8 B 129 THR VAL THR ALA ARG LEU LYS TRP SER GLU GLY PRO PRO SEQRES 9 B 129 THR ASN LEU SER ILE GLN CYS TYR MET PRO LYS SER PRO SEQRES 10 B 129 VAL ALA PRO LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 136 ARG SER TRP HIS TYR VAL GLU PRO LYS PHE LEU ASN LYS SEQRES 2 C 136 ALA PHE GLU VAL ALA LEU LYS VAL GLN ILE ILE ALA GLY SEQRES 3 C 136 PHE ASP ARG GLY LEU VAL LYS TRP LEU ARG VAL HIS GLY SEQRES 4 C 136 ARG THR LEU SER THR VAL GLN LYS LYS ALA LEU TYR PHE SEQRES 5 C 136 VAL ASN ARG ARG TYR MET GLN THR HIS TRP ALA ASN TYR SEQRES 6 C 136 MET LEU TRP ILE ASN LYS LYS ILE ASP ALA LEU GLY ARG SEQRES 7 C 136 THR PRO VAL VAL GLY ASP TYR THR ARG LEU GLY ALA GLU SEQRES 8 C 136 ILE GLY ARG ARG ILE ASP MET ALA TYR PHE TYR ASP PHE SEQRES 9 C 136 LEU LYS ASP LYS ASN MET ILE PRO LYS TYR LEU PRO TYR SEQRES 10 C 136 MET GLU GLU ILE ASN ARG MET ARG PRO ALA ASP VAL PRO SEQRES 11 C 136 VAL LYS TYR MET GLY LYS SEQRES 1 D 129 ALA GLN THR ASN ALA ALA ALA ASP TRP ASP VAL TYR CYS SEQRES 2 D 129 SER GLN ASP GLU SER ILE PRO ALA LYS PHE ILE SER ARG SEQRES 3 D 129 LEU VAL THR SER LYS ASP GLN ALA LEU GLU LYS THR GLU SEQRES 4 D 129 ILE ASN CYS SER ASN GLY LEU VAL PRO ILE THR GLN GLU SEQRES 5 D 129 PHE GLY ILE ASN MET MET LEU ILE GLN TYR THR ARG ASN SEQRES 6 D 129 GLU LEU LEU ASP SER PRO GLY MET CYS VAL PHE TRP GLY SEQRES 7 D 129 PRO TYR SER VAL PRO LYS ASN ASP THR VAL VAL LEU TYR SEQRES 8 D 129 THR VAL THR ALA ARG LEU LYS TRP SER GLU GLY PRO PRO SEQRES 9 D 129 THR ASN LEU SER ILE GLN CYS TYR MET PRO LYS SER PRO SEQRES 10 D 129 VAL ALA PRO LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 136 ARG SER TRP HIS TYR VAL GLU PRO LYS PHE LEU ASN LYS SEQRES 2 E 136 ALA PHE GLU VAL ALA LEU LYS VAL GLN ILE ILE ALA GLY SEQRES 3 E 136 PHE ASP ARG GLY LEU VAL LYS TRP LEU ARG VAL HIS GLY SEQRES 4 E 136 ARG THR LEU SER THR VAL GLN LYS LYS ALA LEU TYR PHE SEQRES 5 E 136 VAL ASN ARG ARG TYR MET GLN THR HIS TRP ALA ASN TYR SEQRES 6 E 136 MET LEU TRP ILE ASN LYS LYS ILE ASP ALA LEU GLY ARG SEQRES 7 E 136 THR PRO VAL VAL GLY ASP TYR THR ARG LEU GLY ALA GLU SEQRES 8 E 136 ILE GLY ARG ARG ILE ASP MET ALA TYR PHE TYR ASP PHE SEQRES 9 E 136 LEU LYS ASP LYS ASN MET ILE PRO LYS TYR LEU PRO TYR SEQRES 10 E 136 MET GLU GLU ILE ASN ARG MET ARG PRO ALA ASP VAL PRO SEQRES 11 E 136 VAL LYS TYR MET GLY LYS SEQRES 1 F 129 ALA GLN THR ASN ALA ALA ALA ASP TRP ASP VAL TYR CYS SEQRES 2 F 129 SER GLN ASP GLU SER ILE PRO ALA LYS PHE ILE SER ARG SEQRES 3 F 129 LEU VAL THR SER LYS ASP GLN ALA LEU GLU LYS THR GLU SEQRES 4 F 129 ILE ASN CYS SER ASN GLY LEU VAL PRO ILE THR GLN GLU SEQRES 5 F 129 PHE GLY ILE ASN MET MET LEU ILE GLN TYR THR ARG ASN SEQRES 6 F 129 GLU LEU LEU ASP SER PRO GLY MET CYS VAL PHE TRP GLY SEQRES 7 F 129 PRO TYR SER VAL PRO LYS ASN ASP THR VAL VAL LEU TYR SEQRES 8 F 129 THR VAL THR ALA ARG LEU LYS TRP SER GLU GLY PRO PRO SEQRES 9 F 129 THR ASN LEU SER ILE GLN CYS TYR MET PRO LYS SER PRO SEQRES 10 F 129 VAL ALA PRO LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 G 136 ARG SER TRP HIS TYR VAL GLU PRO LYS PHE LEU ASN LYS SEQRES 2 G 136 ALA PHE GLU VAL ALA LEU LYS VAL GLN ILE ILE ALA GLY SEQRES 3 G 136 PHE ASP ARG GLY LEU VAL LYS TRP LEU ARG VAL HIS GLY SEQRES 4 G 136 ARG THR LEU SER THR VAL GLN LYS LYS ALA LEU TYR PHE SEQRES 5 G 136 VAL ASN ARG ARG TYR MET GLN THR HIS TRP ALA ASN TYR SEQRES 6 G 136 MET LEU TRP ILE ASN LYS LYS ILE ASP ALA LEU GLY ARG SEQRES 7 G 136 THR PRO VAL VAL GLY ASP TYR THR ARG LEU GLY ALA GLU SEQRES 8 G 136 ILE GLY ARG ARG ILE ASP MET ALA TYR PHE TYR ASP PHE SEQRES 9 G 136 LEU LYS ASP LYS ASN MET ILE PRO LYS TYR LEU PRO TYR SEQRES 10 G 136 MET GLU GLU ILE ASN ARG MET ARG PRO ALA ASP VAL PRO SEQRES 11 G 136 VAL LYS TYR MET GLY LYS SEQRES 1 H 129 ALA GLN THR ASN ALA ALA ALA ASP TRP ASP VAL TYR CYS SEQRES 2 H 129 SER GLN ASP GLU SER ILE PRO ALA LYS PHE ILE SER ARG SEQRES 3 H 129 LEU VAL THR SER LYS ASP GLN ALA LEU GLU LYS THR GLU SEQRES 4 H 129 ILE ASN CYS SER ASN GLY LEU VAL PRO ILE THR GLN GLU SEQRES 5 H 129 PHE GLY ILE ASN MET MET LEU ILE GLN TYR THR ARG ASN SEQRES 6 H 129 GLU LEU LEU ASP SER PRO GLY MET CYS VAL PHE TRP GLY SEQRES 7 H 129 PRO TYR SER VAL PRO LYS ASN ASP THR VAL VAL LEU TYR SEQRES 8 H 129 THR VAL THR ALA ARG LEU LYS TRP SER GLU GLY PRO PRO SEQRES 9 H 129 THR ASN LEU SER ILE GLN CYS TYR MET PRO LYS SER PRO SEQRES 10 H 129 VAL ALA PRO LYS LEU GLU HIS HIS HIS HIS HIS HIS
HET NAG B 501 28 HET NAG B 502 28 HET NAG D 501 28 HET NAG D 502 28 HET NAG F 501 28 HET NAG F 502 28 HET NAG H 501 28 HET NAG H 502 28
HETNAM NAG N-ACETYL-D-GLUCOSAMINE
FORMUL 9 NAG 8(C8 H15 N O6) FORMUL 17 HOH *577(H2 O)
HELIX 1 AA1 ASN A 30 GLY A 57 1 28 HELIX 2 AA2 SER A 61 ALA A 93 1 33 HELIX 3 AA3 VAL A 99 ILE A 114 1 16 HELIX 4 AA4 MET A 116 LYS A 126 1 11 HELIX 5 AA5 LEU A 133 MET A 142 1 10 HELIX 6 AA6 ARG A 143 VAL A 147 5 5 HELIX 7 AA7 ASN C 30 GLY C 57 1 28 HELIX 8 AA8 SER C 61 ALA C 93 1 33 HELIX 9 AA9 VAL C 99 ILE C 114 1 16 HELIX 10 AB1 MET C 116 LYS C 126 1 11 HELIX 11 AB2 LEU C 133 MET C 142 1 10 HELIX 12 AB3 ARG C 143 VAL C 147 5 5 HELIX 13 AB4 ASN E 30 GLY E 57 1 28 HELIX 14 AB5 SER E 61 ALA E 93 1 33 HELIX 15 AB6 VAL E 99 ILE E 114 1 16 HELIX 16 AB7 MET E 116 LYS E 126 1 11 HELIX 17 AB8 LEU E 133 MET E 142 1 10 HELIX 18 AB9 ARG E 143 VAL E 147 5 5 HELIX 19 AC1 ASN G 30 GLY G 57 1 28 HELIX 20 AC2 SER G 61 ALA G 93 1 33 HELIX 21 AC3 VAL G 99 ILE G 114 1 16 HELIX 22 AC4 MET G 116 LYS G 126 1 11 HELIX 23 AC5 LEU G 133 MET G 142 1 10 HELIX 24 AC6 ARG G 143 VAL G 147 5 5
SHEET 1 AA1 4 ASP B 340 TYR B 344 0 SHEET 2 AA1 4 ALA B 353 LEU B 359 -1 O ARG B 358 N ASP B 340 SHEET 3 AA1 4 GLY B 386 GLN B 393 -1 O MET B 390 N PHE B 355 SHEET 4 AA1 4 CYS B 406 VAL B 407 1 O CYS B 406 N GLN B 393 SHEET 1 AA2 4 GLY B 377 ILE B 381 0 SHEET 2 AA2 4 LEU B 367 CYS B 374 -1 N ILE B 372 O VAL B 379 SHEET 3 AA2 4 ASN B 417 TRP B 431 -1 O THR B 426 N ASN B 373 SHEET 4 AA2 4 TRP B 409 VAL B 414 -1 N TRP B 409 O THR B 424 SHEET 1 AA3 4 GLY B 377 ILE B 381 0 SHEET 2 AA3 4 LEU B 367 CYS B 374 -1 N ILE B 372 O VAL B 379 SHEET 3 AA3 4 ASN B 417 TRP B 431 -1 O THR B 426 N ASN B 373 SHEET 4 AA3 4 THR B 437 PRO B 446 -1 O THR B 437 N LEU B 429 SHEET 1 AA4 4 ASP D 342 TYR D 344 0 SHEET 2 AA4 4 ALA D 353 LEU D 359 -1 O ILE D 356 N ASP D 342 SHEET 3 AA4 4 GLY D 386 GLN D 393 -1 O ILE D 392 N ALA D 353 SHEET 4 AA4 4 CYS D 406 VAL D 407 1 O CYS D 406 N GLN D 393 SHEET 1 AA5 4 GLY D 377 ILE D 381 0 SHEET 2 AA5 4 LEU D 367 CYS D 374 -1 N ILE D 372 O VAL D 379 SHEET 3 AA5 4 ASN D 417 TRP D 431 -1 O THR D 426 N ASN D 373 SHEET 4 AA5 4 TRP D 409 VAL D 414 -1 N TYR D 412 O LEU D 422 SHEET 1 AA6 4 GLY D 377 ILE D 381 0 SHEET 2 AA6 4 LEU D 367 CYS D 374 -1 N ILE D 372 O VAL D 379 SHEET 3 AA6 4 ASN D 417 TRP D 431 -1 O THR D 426 N ASN D 373 SHEET 4 AA6 4 THR D 437 PRO D 446 -1 O ILE D 441 N VAL D 425 SHEET 1 AA7 4 ASP F 340 TYR F 344 0 SHEET 2 AA7 4 ALA F 353 LEU F 359 -1 O LYS F 354 N TYR F 344 SHEET 3 AA7 4 GLY F 386 GLN F 393 -1 O ILE F 392 N ALA F 353 SHEET 4 AA7 4 CYS F 406 VAL F 407 1 O CYS F 406 N GLN F 393 SHEET 1 AA8 4 GLY F 377 ILE F 381 0 SHEET 2 AA8 4 LEU F 367 CYS F 374 -1 N ILE F 372 O VAL F 379 SHEET 3 AA8 4 ASN F 417 TRP F 431 -1 O THR F 426 N ASN F 373 SHEET 4 AA8 4 TRP F 409 VAL F 414 -1 N TRP F 409 O THR F 424 SHEET 1 AA9 4 GLY F 377 ILE F 381 0 SHEET 2 AA9 4 LEU F 367 CYS F 374 -1 N ILE F 372 O VAL F 379 SHEET 3 AA9 4 ASN F 417 TRP F 431 -1 O THR F 426 N ASN F 373 SHEET 4 AA9 4 THR F 437 PRO F 446 -1 O THR F 437 N LEU F 429 SHEET 1 AB1 4 TRP H 341 TYR H 344 0 SHEET 2 AB1 4 ALA H 353 LEU H 359 -1 O LYS H 354 N TYR H 344 SHEET 3 AB1 4 GLY H 386 GLN H 393 -1 O MET H 390 N PHE H 355 SHEET 4 AB1 4 CYS H 406 VAL H 407 1 O CYS H 406 N GLN H 393 SHEET 1 AB2 4 GLY H 377 ILE H 381 0 SHEET 2 AB2 4 LEU H 367 CYS H 374 -1 N ILE H 372 O VAL H 379 SHEET 3 AB2 4 ASN H 417 TRP H 431 -1 O THR H 426 N ASN H 373 SHEET 4 AB2 4 TRP H 409 VAL H 414 -1 N TRP H 409 O THR H 424 SHEET 1 AB3 4 GLY H 377 ILE H 381 0 SHEET 2 AB3 4 LEU H 367 CYS H 374 -1 N ILE H 372 O VAL H 379 SHEET 3 AB3 4 ASN H 417 TRP H 431 -1 O THR H 426 N ASN H 373 SHEET 4 AB3 4 THR H 437 PRO H 446 -1 O ILE H 441 N VAL H 425
SSBOND 1 CYS B 345 CYS B 443 1555 1555 2.05 SSBOND 2 CYS B 374 CYS B 406 1555 1555 2.05 SSBOND 3 CYS D 345 CYS D 443 1555 1555 2.06 SSBOND 4 CYS D 374 CYS D 406 1555 1555 2.04 SSBOND 5 CYS F 345 CYS F 443 1555 1555 2.05 SSBOND 6 CYS F 374 CYS F 406 1555 1555 2.04 SSBOND 7 CYS H 345 CYS H 443 1555 1555 2.04 SSBOND 8 CYS H 374 CYS H 406 1555 1555 2.04
LINK ND2 ASN B 373 C1 NAG B 501 1555 1555 1.43 LINK ND2 ASN B 417 C1 NAG B 502 1555 1555 1.43 LINK ND2 ASN D 373 C1 NAG D 501 1555 1555 1.42 LINK ND2 ASN D 417 C1 NAG D 502 1555 1555 1.43 LINK ND2 ASN F 373 C1 NAG F 501 1555 1555 1.41 LINK ND2 ASN F 417 C1 NAG F 502 1555 1555 1.45 LINK ND2 ASN H 373 C1 NAG H 501 1555 1555 1.43 LINK ND2 ASN H 417 C1 NAG H 502 1555 1555 1.43
CISPEP 1 GLY B 410 PRO B 411 0 6.85 CISPEP 2 GLY D 410 PRO D 411 0 6.98 CISPEP 3 GLY F 410 PRO F 411 0 7.55 CISPEP 4 GLY H 410 PRO H 411 0 6.23
SITE 1 AC1 7 ASN B 373 LEU B 378 HOH B5009 HOH B5025 SITE 2 AC1 7 TRP D 409 NAG D 501 HOH D5021 SITE 1 AC2 2 ASN B 417 VAL B 420 SITE 1 AC3 5 TRP B 409 NAG B 501 ASN D 373 HOH D5012 SITE 2 AC3 5 HOH D5023 SITE 1 AC4 2 ASN D 417 THR D 419 SITE 1 AC5 7 ASN F 373 LEU F 378 HOH F5007 HOH F5027 SITE 2 AC5 7 TRP H 409 NAG H 501 HOH H5021 SITE 1 AC6 5 LYS A 124 ASP A 125 ASN A 127 ASN F 417 SITE 2 AC6 5 HOH F5020 SITE 1 AC7 7 TRP F 409 NAG F 501 HOH F5023 ASN H 373 SITE 2 AC7 7 LEU H 378 HOH H5015 HOH H5030 SITE 1 AC8 3 ASN H 417 THR H 419 TYR H 444
CRYST1 60.490 60.330 89.170 105.04 89.02 113.28 P 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016532 0.007112 0.001740 0.00000
SCALE2 0.000000 0.018044 0.005164 0.00000
SCALE3 0.000000 0.000000 0.011666 0.00000