10 20 30 40 50 60 70 80 4W9O - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ISOMERASE 27-AUG-14 4W9O
TITLE THE FK1 DOMAIN OF FKBP51 IN COMPLEX WITH (1S,5S,6R)-10-[(3,5- TITLE 2 DICHLOROPHENYL)SULFONYL]-5-[(1R)-1,2-DIHYDROXYETHYL]-3-[2-(3,4- TITLE 3 DIMETHOXYPHENOXY)ETHYL]-3,10-DIAZABICYCLO[4.3.1]DECAN-2-ONE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP5; COMPND 3 CHAIN: A, E; COMPND 4 FRAGMENT: FK1 DOMAIN, UNP RESIDUES 16-140; COMPND 5 SYNONYM: PPIASE FKBP5,51 KDA FK506-BINDING PROTEIN,FKBP-51,54 KDA COMPND 6 PROGESTERONE RECEPTOR-ASSOCIATED IMMUNOPHILIN,ANDROGEN-REGULATED COMPND 7 PROTEIN 6,FF1 ANTIGEN,FK506-BINDING PROTEIN 5,FKBP-5,FKBP54,P54, COMPND 8 HSP90-BINDING IMMUNOPHILIN,ROTAMASE; COMPND 9 EC: 5.2.1.8; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FKBP5, AIG6, FKBP51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CODON+ RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX-HTB
KEYWDS FK-506 BINDING DOMAIN, HSP90 COCHAPERONE, IMMUNOPHILINE, PEPTIDYL- KEYWDS 2 PROLYL ISOMERASE, LIGAND SELECTIVITY, ISOMERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR S.POMPLUN,Y.WANG,K.KIRSCHNER,C.KOZANY,A.BRACHER,F.HAUSCH
REVDAT 2 14-JAN-15 4W9O 1 JRNL REVDAT 1 03-DEC-14 4W9O 0
JRNL AUTH S.POMPLUN,Y.WANG,A.KIRSCHNER,C.KOZANY,A.BRACHER,F.HAUSCH JRNL TITL RATIONAL DESIGN AND ASYMMETRIC SYNTHESIS OF POTENT AND JRNL TITL 2 NEUROTROPHIC LIGANDS FOR FK506-BINDING PROTEINS (FKBPS). JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 54 345 2015 JRNL REFN ESSN 1521-3773 JRNL PMID 25412894 JRNL DOI 10.1002/ANIE.201408776
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.BRACHER,C.KOZANY,A.-K.THOST,F.HAUSCH REMARK 1 TITL STRUCTURAL CHARACTERIZATION OF THE PPIASE DOMAIN OF FKBP51, REMARK 1 TITL 2 A COCHAPERONE OF HUMAN HSP90 REMARK 1 REF ACTA CRYST. SECT. D V. 67 549 2011 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 21636895 REMARK 1 DOI 10.1107/S0907444911013862
REMARK 2 REMARK 2 RESOLUTION. 1.27 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 56123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.139 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2979 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.30 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4071 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 226 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1927 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.26000 REMARK 3 B22 (A**2) : -0.59000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.24000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.048 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.032 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.691 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2169 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2097 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2932 ; 1.526 ; 2.016 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4888 ; 0.891 ; 3.009 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 272 ; 6.765 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;32.225 ;24.691 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 397 ;11.476 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;11.260 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 309 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2420 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 457 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4265 ; 3.179 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 62 ;20.626 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4453 ; 6.212 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY
REMARK 4 REMARK 4 4W9O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000203436.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59102 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.270 REMARK 200 RESOLUTION RANGE LOW (A) : 40.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.63600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 10.2.35 REMARK 200 STARTING MODEL: 3O5Q REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 34 % PEG-3350, 0.2 M NH4-ACETATE AND REMARK 280 0.1 M HEPES-NAOH PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.35200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.29300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.35200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.29300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS A MONOMER
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 13 REMARK 465 ALA A 14 REMARK 465 PRO A 15 REMARK 465 ALA A 16 REMARK 465 GLU A 140 REMARK 465 GLU E 140
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 20 CG CD OE1 OE2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG E 39 O HOH E 407 0.23 REMARK 500 NZ LYS E 88 O HOH A 438 0.33 REMARK 500 NH1 ARG E 39 O HOH E 405 0.61 REMARK 500 OE1 GLU E 110 O HOH E 301 0.78 REMARK 500 OD1 ASP E 72 O HOH E 440 0.89 REMARK 500 CE LYS E 88 O HOH A 438 1.23 REMARK 500 OD2 ASP E 72 O HOH E 389 1.30 REMARK 500 CZ ARG E 39 O HOH E 407 1.50 REMARK 500 CZ ARG E 39 O HOH E 405 1.90 REMARK 500 CD GLU E 110 O HOH E 301 1.93 REMARK 500 CG ASP E 72 O HOH E 440 1.94 REMARK 500 NZ LYS A 108 O HOH A 301 2.01 REMARK 500 O HOH E 348 O HOH E 369 2.16 REMARK 500 NH2 ARG A 73 O HOH A 449 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 302 O HOH A 376 2555 1.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 112 -121.13 -139.93 REMARK 500 SER A 118 79.67 -152.85 REMARK 500 ALA E 112 -120.59 -141.39 REMARK 500 SER E 118 84.38 -154.18 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 441 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH E 435 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH E 445 DISTANCE = 5.85 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3JQ A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3JQ E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT E 203
DBREF 4W9O A 16 140 UNP Q13451 FKBP5_HUMAN 16 140 DBREF 4W9O E 16 140 UNP Q13451 FKBP5_HUMAN 16 140
SEQADV 4W9O GLY A 13 UNP Q13451 EXPRESSION TAG SEQADV 4W9O ALA A 14 UNP Q13451 EXPRESSION TAG SEQADV 4W9O PRO A 15 UNP Q13451 EXPRESSION TAG SEQADV 4W9O THR A 19 UNP Q13451 ALA 19 ENGINEERED MUTATION SEQADV 4W9O GLY E 13 UNP Q13451 EXPRESSION TAG SEQADV 4W9O ALA E 14 UNP Q13451 EXPRESSION TAG SEQADV 4W9O PRO E 15 UNP Q13451 EXPRESSION TAG SEQADV 4W9O THR E 19 UNP Q13451 ALA 19 ENGINEERED MUTATION
SEQRES 1 A 128 GLY ALA PRO ALA THR VAL THR GLU GLN GLY GLU ASP ILE SEQRES 2 A 128 THR SER LYS LYS ASP ARG GLY VAL LEU LYS ILE VAL LYS SEQRES 3 A 128 ARG VAL GLY ASN GLY GLU GLU THR PRO MET ILE GLY ASP SEQRES 4 A 128 LYS VAL TYR VAL HIS TYR LYS GLY LYS LEU SER ASN GLY SEQRES 5 A 128 LYS LYS PHE ASP SER SER HIS ASP ARG ASN GLU PRO PHE SEQRES 6 A 128 VAL PHE SER LEU GLY LYS GLY GLN VAL ILE LYS ALA TRP SEQRES 7 A 128 ASP ILE GLY VAL ALA THR MET LYS LYS GLY GLU ILE CYS SEQRES 8 A 128 HIS LEU LEU CYS LYS PRO GLU TYR ALA TYR GLY SER ALA SEQRES 9 A 128 GLY SER LEU PRO LYS ILE PRO SER ASN ALA THR LEU PHE SEQRES 10 A 128 PHE GLU ILE GLU LEU LEU ASP PHE LYS GLY GLU SEQRES 1 E 128 GLY ALA PRO ALA THR VAL THR GLU GLN GLY GLU ASP ILE SEQRES 2 E 128 THR SER LYS LYS ASP ARG GLY VAL LEU LYS ILE VAL LYS SEQRES 3 E 128 ARG VAL GLY ASN GLY GLU GLU THR PRO MET ILE GLY ASP SEQRES 4 E 128 LYS VAL TYR VAL HIS TYR LYS GLY LYS LEU SER ASN GLY SEQRES 5 E 128 LYS LYS PHE ASP SER SER HIS ASP ARG ASN GLU PRO PHE SEQRES 6 E 128 VAL PHE SER LEU GLY LYS GLY GLN VAL ILE LYS ALA TRP SEQRES 7 E 128 ASP ILE GLY VAL ALA THR MET LYS LYS GLY GLU ILE CYS SEQRES 8 E 128 HIS LEU LEU CYS LYS PRO GLU TYR ALA TYR GLY SER ALA SEQRES 9 E 128 GLY SER LEU PRO LYS ILE PRO SER ASN ALA THR LEU PHE SEQRES 10 E 128 PHE GLU ILE GLU LEU LEU ASP PHE LYS GLY GLU
HET 3JQ A 201 39 HET 3JQ E 201 39 HET ACT E 202 4 HET ACT E 203 4
HETNAM 3JQ (1S,5S,6R)-10-[(3,5-DICHLOROPHENYL)SULFONYL]-5-[(1R)-1, HETNAM 2 3JQ 2-DIHYDROXYETHYL]-3-[2-(3,4-DIMETHOXYPHENOXY)ETHYL]-3, HETNAM 3 3JQ 10-DIAZABICYCLO[4.3.1]DECAN-2-ONE HETNAM ACT ACETATE ION
FORMUL 3 3JQ 2(C26 H32 CL2 N2 O8 S) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *300(H2 O)
HELIX 1 AA1 HIS A 71 ASN A 74 5 4 HELIX 2 AA2 ILE A 87 ALA A 95 1 9 HELIX 3 AA3 PRO A 109 ALA A 112 5 4 HELIX 4 AA4 ALA E 14 GLY E 22 1 9 HELIX 5 AA5 HIS E 71 ASN E 74 5 4 HELIX 6 AA6 ILE E 87 ALA E 95 1 9 HELIX 7 AA7 PRO E 109 ALA E 112 5 4
SHEET 1 AA1 7 VAL A 18 THR A 19 0 SHEET 2 AA1 7 GLY A 22 ASP A 24 -1 O GLY A 22 N THR A 19 SHEET 3 AA1 7 VAL A 33 ARG A 39 -1 O LYS A 35 N GLU A 23 SHEET 4 AA1 7 ILE A 102 CYS A 107 -1 O LEU A 106 N LEU A 34 SHEET 5 AA1 7 LEU A 128 LYS A 138 -1 O LEU A 128 N CYS A 107 SHEET 6 AA1 7 LYS A 52 LYS A 60 -1 N LYS A 52 O LYS A 138 SHEET 7 AA1 7 LYS A 66 SER A 69 -1 O ASP A 68 N GLY A 59 SHEET 1 AA2 7 VAL A 18 THR A 19 0 SHEET 2 AA2 7 GLY A 22 ASP A 24 -1 O GLY A 22 N THR A 19 SHEET 3 AA2 7 VAL A 33 ARG A 39 -1 O LYS A 35 N GLU A 23 SHEET 4 AA2 7 ILE A 102 CYS A 107 -1 O LEU A 106 N LEU A 34 SHEET 5 AA2 7 LEU A 128 LYS A 138 -1 O LEU A 128 N CYS A 107 SHEET 6 AA2 7 LYS A 52 LYS A 60 -1 N LYS A 52 O LYS A 138 SHEET 7 AA2 7 PHE A 77 SER A 80 -1 O PHE A 79 N VAL A 53 SHEET 1 AA3 6 GLU E 23 ASP E 24 0 SHEET 2 AA3 6 VAL E 33 ARG E 39 -1 O LYS E 35 N GLU E 23 SHEET 3 AA3 6 ILE E 102 CYS E 107 -1 O HIS E 104 N ILE E 36 SHEET 4 AA3 6 LEU E 128 LYS E 138 -1 O LEU E 128 N CYS E 107 SHEET 5 AA3 6 LYS E 52 LEU E 61 -1 N HIS E 56 O GLU E 133 SHEET 6 AA3 6 LYS E 66 SER E 69 -1 O ASP E 68 N GLY E 59 SHEET 1 AA4 6 GLU E 23 ASP E 24 0 SHEET 2 AA4 6 VAL E 33 ARG E 39 -1 O LYS E 35 N GLU E 23 SHEET 3 AA4 6 ILE E 102 CYS E 107 -1 O HIS E 104 N ILE E 36 SHEET 4 AA4 6 LEU E 128 LYS E 138 -1 O LEU E 128 N CYS E 107 SHEET 5 AA4 6 LYS E 52 LEU E 61 -1 N HIS E 56 O GLU E 133 SHEET 6 AA4 6 PHE E 77 SER E 80 -1 O PHE E 79 N VAL E 53
CISPEP 1 LEU A 119 PRO A 120 0 6.26 CISPEP 2 LEU E 119 PRO E 120 0 6.01
SITE 1 AC1 18 TYR A 57 PHE A 67 ASP A 68 PHE A 77 SITE 2 AC1 18 GLY A 84 GLN A 85 VAL A 86 ILE A 87 SITE 3 AC1 18 TRP A 90 ALA A 112 TYR A 113 SER A 118 SITE 4 AC1 18 PHE A 130 HOH A 411 HOH A 414 HOH A 419 SITE 5 AC1 18 3JQ E 201 HOH E 411 SITE 1 AC2 18 3JQ A 201 TYR E 57 PHE E 67 ASP E 68 SITE 2 AC2 18 PHE E 77 GLY E 84 GLN E 85 VAL E 86 SITE 3 AC2 18 ILE E 87 TRP E 90 ALA E 112 TYR E 113 SITE 4 AC2 18 SER E 118 PHE E 130 HOH E 376 HOH E 387 SITE 5 AC2 18 HOH E 399 HOH E 430 SITE 1 AC3 7 GLY E 13 ALA E 14 PRO E 15 MET E 48 SITE 2 AC3 7 ASP E 51 LYS E 60 HOH E 357 SITE 1 AC4 6 HIS A 56 HOH A 319 HOH A 325 HOH A 335 SITE 2 AC4 6 SER E 62 ASN E 63
CRYST1 72.704 50.586 68.953 90.00 115.54 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013754 0.000000 0.006571 0.00000
SCALE2 0.000000 0.019768 0.000000 0.00000
SCALE3 0.000000 0.000000 0.016073 0.00000