10 20 30 40 50 60 70 80 4HD6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER OXIDOREDUCTASE 02-OCT-12 4HD6
TITLE CRYSTAL STRUCTURE OF TYROSINASE FROM BACILLUS MEGATERIUM V218F MUTANT TITLE 2 SOAKED IN CUSO4
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.14.18.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS MEGATERIUM; SOURCE 3 ORGANISM_TAXID: 1404; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET9D
KEYWDS TYROSINASE, TYPE 3 COPPER PROTEIN, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.GOLDFEDER,M.KANTEEV,N.ADIR,A.FISHMAN
REVDAT 2 13-FEB-13 4HD6 1 JRNL REVDAT 1 23-JAN-13 4HD6 0
JRNL AUTH M.GOLDFEDER,M.KANTEEV,N.ADIR,A.FISHMAN JRNL TITL INFLUENCING THE MONOPHENOLASE/DIPHENOLASE ACTIVITY RATIO IN JRNL TITL 2 TYROSINASE. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1834 629 2013 JRNL REFN ISSN 0006-3002 JRNL PMID 23305929 JRNL DOI 10.1016/J.BBAPAP.2012.12.021
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.SENDOVSKI,M.KANTEEV,V.S.BEN-YOSEF,N.ADIR,A.FISHMAN REMARK 1 TITL FIRST STRUCTURES OF AN ACTIVE BACTERIAL TYROSINASE REVEAL REMARK 1 TITL 2 COPPER PLASTICITY. REMARK 1 REF J.MOL.BIOL. V. 405 227 2011 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 21040728 REMARK 1 DOI 10.1016/J.JMB.2010.10.048
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 40605 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2248 - 6.1382 0.94 1239 149 0.2017 0.2221 REMARK 3 2 6.1382 - 4.8745 0.99 1331 135 0.1800 0.1987 REMARK 3 3 4.8745 - 4.2591 0.98 1305 133 0.1657 0.1667 REMARK 3 4 4.2591 - 3.8700 0.97 1280 135 0.1933 0.2101 REMARK 3 5 3.8700 - 3.5928 0.98 1279 133 0.2088 0.2442 REMARK 3 6 3.5928 - 3.3811 0.97 1241 170 0.2362 0.2442 REMARK 3 7 3.3811 - 3.2118 0.98 1253 144 0.2362 0.2581 REMARK 3 8 3.2118 - 3.0720 0.96 1240 144 0.2443 0.2939 REMARK 3 9 3.0720 - 2.9538 0.97 1265 145 0.2358 0.2579 REMARK 3 10 2.9538 - 2.8519 0.99 1257 158 0.2398 0.2848 REMARK 3 11 2.8519 - 2.7628 0.97 1290 138 0.2566 0.2799 REMARK 3 12 2.7628 - 2.6838 0.98 1271 125 0.2689 0.2903 REMARK 3 13 2.6838 - 2.6132 0.98 1281 125 0.2726 0.2905 REMARK 3 14 2.6132 - 2.5494 0.98 1256 137 0.2552 0.3012 REMARK 3 15 2.5494 - 2.4915 0.98 1276 143 0.2606 0.2985 REMARK 3 16 2.4915 - 2.4384 0.98 1264 130 0.2596 0.3441 REMARK 3 17 2.4384 - 2.3897 0.99 1235 168 0.2783 0.3288 REMARK 3 18 2.3897 - 2.3446 0.98 1308 136 0.2632 0.3305 REMARK 3 19 2.3446 - 2.3027 0.98 1240 141 0.2832 0.3733 REMARK 3 20 2.3027 - 2.2637 0.96 1228 152 0.3265 0.3838 REMARK 3 21 2.2637 - 2.2272 0.92 1195 137 0.3563 0.3781 REMARK 3 22 2.2272 - 2.1929 0.98 1213 147 0.3140 0.3697 REMARK 3 23 2.1929 - 2.1607 0.98 1311 144 0.3082 0.3318 REMARK 3 24 2.1607 - 2.1302 0.98 1285 134 0.3197 0.3451 REMARK 3 25 2.1302 - 2.1014 0.99 1248 117 0.3212 0.3549 REMARK 3 26 2.1014 - 2.0742 0.90 1186 120 0.3806 0.4379 REMARK 3 27 2.0742 - 2.0482 0.94 1199 147 0.3545 0.4049 REMARK 3 28 2.0482 - 2.0236 0.99 1319 126 0.3394 0.3633 REMARK 3 29 2.0236 - 2.0000 0.99 1242 155 0.3117 0.4036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 30.92 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.36020 REMARK 3 B22 (A**2) : -5.39940 REMARK 3 B33 (A**2) : 8.75960 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 5.50020 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4882 REMARK 3 ANGLE : 1.244 6653 REMARK 3 CHIRALITY : 0.087 660 REMARK 3 PLANARITY : 0.008 881 REMARK 3 DIHEDRAL : 16.983 1779 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 4HD6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-OCT-12. REMARK 100 THE RCSB ID CODE IS RCSB075317.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40762 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 82.432 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.28500 REMARK 200 R SYM FOR SHELL (I) : 0.28500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, SODIUM CACODYLATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.45500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASN A 3 REMARK 465 ARG A 291 REMARK 465 LYS A 292 REMARK 465 SER A 293 REMARK 465 LYS A 294 REMARK 465 ARG A 295 REMARK 465 SER A 296 REMARK 465 SER A 297 REMARK 465 HIS A 298 REMARK 465 HIS A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ASN B 3 REMARK 465 LEU B 290 REMARK 465 ARG B 291 REMARK 465 LYS B 292 REMARK 465 SER B 293 REMARK 465 LYS B 294 REMARK 465 ARG B 295 REMARK 465 SER B 296 REMARK 465 SER B 297 REMARK 465 HIS B 298 REMARK 465 HIS B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 465 HIS B 302 REMARK 465 HIS B 303
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 158 O HOH A 567 1.47 REMARK 500 O SER B 146 O HOH B 521 1.76 REMARK 500 O HOH B 541 O HOH B 601 1.80 REMARK 500 NZ LYS B 173 O HOH B 626 1.81 REMARK 500 N ASP A 102 O HOH A 590 1.82 REMARK 500 NH1 ARG B 206 O HOH B 601 1.83 REMARK 500 O HOH B 587 O HOH B 614 1.86 REMARK 500 N THR B 156 O HOH B 547 1.87 REMARK 500 SD MET A 277 O HOH A 578 1.87 REMARK 500 O HOH A 585 O HOH B 565 1.88 REMARK 500 CA GLN A 101 O HOH A 590 1.91 REMARK 500 N GLN A 101 O HOH A 590 1.91 REMARK 500 OD2 ASP B 102 O HOH B 609 1.92 REMARK 500 OD1 ASP A 275 O HOH A 569 1.92 REMARK 500 O LEU A 12 O HOH A 592 1.93 REMARK 500 OE1 GLN B 251 O HOH B 528 1.93 REMARK 500 ND2 ASN B 170 O HOH B 533 1.95 REMARK 500 OD2 ASP A 102 O HOH A 607 1.96 REMARK 500 ND2 ASN B 188 O HOH B 539 1.97 REMARK 500 SD MET B 61 O HOH B 600 1.97 REMARK 500 O HOH A 574 O HOH A 611 1.99 REMARK 500 NH1 ARG B 37 O HOH B 565 2.00 REMARK 500 O HOH B 596 O HOH B 617 2.01 REMARK 500 SD MET A 61 O HOH A 576 2.02 REMARK 500 ND2 ASN B 270 O HOH B 543 2.03 REMARK 500 CB GLN A 101 O HOH A 590 2.05 REMARK 500 OE2 GLU B 71 O HOH B 573 2.08 REMARK 500 NZ LYS A 254 O HOH A 603 2.09 REMARK 500 OE1 GLU B 274 O HOH B 531 2.10 REMARK 500 OE1 GLN A 248 O HOH A 580 2.11 REMARK 500 NZ LYS A 254 O HOH A 575 2.11 REMARK 500 NE ARG A 56 O HOH A 595 2.11 REMARK 500 O THR B 175 O HOH B 615 2.13 REMARK 500 C GLN A 101 O HOH A 590 2.14 REMARK 500 ND2 ASN B 255 O HOH B 605 2.14 REMARK 500 OD1 ASN B 170 O HOH B 626 2.15 REMARK 500 O HOH B 576 O HOH B 608 2.15 REMARK 500 ND2 ASN A 270 O HOH A 543 2.15 REMARK 500 NE ARG B 37 O HOH B 522 2.16 REMARK 500 O GLY A 33 O HOH A 623 2.16 REMARK 500 CD GLU A 158 O HOH A 567 2.17 REMARK 500 O PRO A 130 O HOH A 583 2.18 REMARK 500 CA GLN B 176 O HOH B 615 2.18 REMARK 500 O HOH A 546 O HOH A 556 2.18 REMARK 500 O HOH A 601 O HOH A 615 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 157 O HOH A 613 2656 1.48 REMARK 500 CE LYS B 157 O HOH A 613 2656 1.54 REMARK 500 NZ LYS B 157 O HOH A 543 2656 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 113 -82.21 -127.06 REMARK 500 ASN A 152 78.94 -157.00 REMARK 500 PRO A 181 31.42 -85.28 REMARK 500 LEU A 203 -127.58 46.72 REMARK 500 THR A 220 12.72 84.88 REMARK 500 HIS A 245 60.66 -117.37 REMARK 500 MET B 61 18.01 59.57 REMARK 500 ASN B 84 104.69 -163.10 REMARK 500 PHE B 113 -75.67 -136.05 REMARK 500 PRO B 181 33.78 -97.51 REMARK 500 ASN B 199 13.35 81.66 REMARK 500 LEU B 203 -117.18 48.90 REMARK 500 HIS B 245 37.13 -82.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 PHE A 113 24.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 231 NE2 REMARK 620 2 HIS A 208 NE2 143.6 REMARK 620 3 HIS A 204 NE2 106.9 87.9 REMARK 620 4 HOH A 501 O 101.7 109.8 95.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 42 NE2 REMARK 620 2 HIS A 69 NE2 133.9 REMARK 620 3 HIS A 60 NE2 106.4 109.2 REMARK 620 4 HOH A 501 O 113.6 104.2 73.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 60 NE2 REMARK 620 2 HIS B 69 NE2 115.2 REMARK 620 3 HIS B 42 NE2 97.8 130.2 REMARK 620 4 HOH B 586 O 81.6 112.9 107.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 208 NE2 REMARK 620 2 HIS B 231 NE2 119.2 REMARK 620 3 HIS B 204 NE2 91.8 113.1 REMARK 620 4 HOH B 586 O 123.2 101.4 107.8 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 402
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HDA RELATED DB: PDB REMARK 900 RELATED ID: 4HD4 RELATED DB: PDB REMARK 900 RELATED ID: 4HD7 RELATED DB: PDB
DBREF 4HD6 A 1 297 UNP B2ZB02 B2ZB02_BACME 1 297 DBREF 4HD6 B 1 297 UNP B2ZB02 B2ZB02_BACME 1 297
SEQADV 4HD6 GLY A 2 UNP B2ZB02 SER 2 ENGINEERED MUTATION SEQADV 4HD6 PHE A 218 UNP B2ZB02 VAL 218 ENGINEERED MUTATION SEQADV 4HD6 HIS A 298 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS A 299 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS A 300 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS A 301 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS A 302 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS A 303 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 GLY B 2 UNP B2ZB02 SER 2 ENGINEERED MUTATION SEQADV 4HD6 PHE B 218 UNP B2ZB02 VAL 218 ENGINEERED MUTATION SEQADV 4HD6 HIS B 298 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS B 299 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS B 300 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS B 301 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS B 302 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD6 HIS B 303 UNP B2ZB02 EXPRESSION TAG
SEQRES 1 A 303 MET GLY ASN LYS TYR ARG VAL ARG LYS ASN VAL LEU HIS SEQRES 2 A 303 LEU THR ASP THR GLU LYS ARG ASP PHE VAL ARG THR VAL SEQRES 3 A 303 LEU ILE LEU LYS GLU LYS GLY ILE TYR ASP ARG TYR ILE SEQRES 4 A 303 ALA TRP HIS GLY ALA ALA GLY LYS PHE HIS THR PRO PRO SEQRES 5 A 303 GLY SER ASP ARG ASN ALA ALA HIS MET SER SER ALA PHE SEQRES 6 A 303 LEU PRO TRP HIS ARG GLU TYR LEU LEU ARG PHE GLU ARG SEQRES 7 A 303 ASP LEU GLN SER ILE ASN PRO GLU VAL THR LEU PRO TYR SEQRES 8 A 303 TRP GLU TRP GLU THR ASP ALA GLN MET GLN ASP PRO SER SEQRES 9 A 303 GLN SER GLN ILE TRP SER ALA ASP PHE MET GLY GLY ASN SEQRES 10 A 303 GLY ASN PRO ILE LYS ASP PHE ILE VAL ASP THR GLY PRO SEQRES 11 A 303 PHE ALA ALA GLY ARG TRP THR THR ILE ASP GLU GLN GLY SEQRES 12 A 303 ASN PRO SER GLY GLY LEU LYS ARG ASN PHE GLY ALA THR SEQRES 13 A 303 LYS GLU ALA PRO THR LEU PRO THR ARG ASP ASP VAL LEU SEQRES 14 A 303 ASN ALA LEU LYS ILE THR GLN TYR ASP THR PRO PRO TRP SEQRES 15 A 303 ASP MET THR SER GLN ASN SER PHE ARG ASN GLN LEU GLU SEQRES 16 A 303 GLY PHE ILE ASN GLY PRO GLN LEU HIS ASN ARG VAL HIS SEQRES 17 A 303 ARG TRP VAL GLY GLY GLN MET GLY VAL PHE PRO THR ALA SEQRES 18 A 303 PRO ASN ASP PRO VAL PHE PHE LEU HIS HIS ALA ASN VAL SEQRES 19 A 303 ASP ARG ILE TRP ALA VAL TRP GLN ILE ILE HIS ARG ASN SEQRES 20 A 303 GLN ASN TYR GLN PRO MET LYS ASN GLY PRO PHE GLY GLN SEQRES 21 A 303 ASN PHE ARG ASP PRO MET TYR PRO TRP ASN THR THR PRO SEQRES 22 A 303 GLU ASP VAL MET ASN HIS ARG LYS LEU GLY TYR VAL TYR SEQRES 23 A 303 ASP ILE GLU LEU ARG LYS SER LYS ARG SER SER HIS HIS SEQRES 24 A 303 HIS HIS HIS HIS SEQRES 1 B 303 MET GLY ASN LYS TYR ARG VAL ARG LYS ASN VAL LEU HIS SEQRES 2 B 303 LEU THR ASP THR GLU LYS ARG ASP PHE VAL ARG THR VAL SEQRES 3 B 303 LEU ILE LEU LYS GLU LYS GLY ILE TYR ASP ARG TYR ILE SEQRES 4 B 303 ALA TRP HIS GLY ALA ALA GLY LYS PHE HIS THR PRO PRO SEQRES 5 B 303 GLY SER ASP ARG ASN ALA ALA HIS MET SER SER ALA PHE SEQRES 6 B 303 LEU PRO TRP HIS ARG GLU TYR LEU LEU ARG PHE GLU ARG SEQRES 7 B 303 ASP LEU GLN SER ILE ASN PRO GLU VAL THR LEU PRO TYR SEQRES 8 B 303 TRP GLU TRP GLU THR ASP ALA GLN MET GLN ASP PRO SER SEQRES 9 B 303 GLN SER GLN ILE TRP SER ALA ASP PHE MET GLY GLY ASN SEQRES 10 B 303 GLY ASN PRO ILE LYS ASP PHE ILE VAL ASP THR GLY PRO SEQRES 11 B 303 PHE ALA ALA GLY ARG TRP THR THR ILE ASP GLU GLN GLY SEQRES 12 B 303 ASN PRO SER GLY GLY LEU LYS ARG ASN PHE GLY ALA THR SEQRES 13 B 303 LYS GLU ALA PRO THR LEU PRO THR ARG ASP ASP VAL LEU SEQRES 14 B 303 ASN ALA LEU LYS ILE THR GLN TYR ASP THR PRO PRO TRP SEQRES 15 B 303 ASP MET THR SER GLN ASN SER PHE ARG ASN GLN LEU GLU SEQRES 16 B 303 GLY PHE ILE ASN GLY PRO GLN LEU HIS ASN ARG VAL HIS SEQRES 17 B 303 ARG TRP VAL GLY GLY GLN MET GLY VAL PHE PRO THR ALA SEQRES 18 B 303 PRO ASN ASP PRO VAL PHE PHE LEU HIS HIS ALA ASN VAL SEQRES 19 B 303 ASP ARG ILE TRP ALA VAL TRP GLN ILE ILE HIS ARG ASN SEQRES 20 B 303 GLN ASN TYR GLN PRO MET LYS ASN GLY PRO PHE GLY GLN SEQRES 21 B 303 ASN PHE ARG ASP PRO MET TYR PRO TRP ASN THR THR PRO SEQRES 22 B 303 GLU ASP VAL MET ASN HIS ARG LYS LEU GLY TYR VAL TYR SEQRES 23 B 303 ASP ILE GLU LEU ARG LYS SER LYS ARG SER SER HIS HIS SEQRES 24 B 303 HIS HIS HIS HIS
HET CU A 401 1 HET CU A 402 1 HET CU B 401 1 HET CU B 402 1
HETNAM CU COPPER (II) ION
FORMUL 3 CU 4(CU 2+) FORMUL 7 HOH *254(H2 O)
HELIX 1 1 ASN A 10 LEU A 14 5 5 HELIX 2 2 THR A 15 LYS A 32 1 18 HELIX 3 3 ILE A 34 LYS A 47 1 14 HELIX 4 4 ALA A 64 ASN A 84 1 21 HELIX 5 5 GLU A 93 ALA A 98 1 6 HELIX 6 6 ASP A 102 SER A 110 5 9 HELIX 7 7 ASN A 119 ASP A 123 5 5 HELIX 8 8 THR A 164 LYS A 173 1 10 HELIX 9 9 SER A 189 GLY A 196 1 8 HELIX 10 10 GLN A 202 GLY A 212 1 11 HELIX 11 11 GLY A 213 VAL A 217 5 5 HELIX 12 12 PRO A 225 HIS A 245 1 21 HELIX 13 13 THR A 272 MET A 277 1 6 HELIX 14 14 ASN A 278 LEU A 282 5 5 HELIX 15 15 ILE A 288 LEU A 290 5 3 HELIX 16 16 ASN B 10 LEU B 14 5 5 HELIX 17 17 THR B 15 LYS B 32 1 18 HELIX 18 18 ILE B 34 GLY B 46 1 13 HELIX 19 19 ALA B 64 ASN B 84 1 21 HELIX 20 20 GLU B 93 ALA B 98 1 6 HELIX 21 21 ASP B 102 SER B 110 5 9 HELIX 22 22 THR B 164 ILE B 174 1 11 HELIX 23 23 SER B 189 GLY B 196 1 8 HELIX 24 24 GLN B 202 GLY B 212 1 11 HELIX 25 25 GLY B 213 ASP B 224 5 12 HELIX 26 26 PRO B 225 HIS B 245 1 21 HELIX 27 27 PRO B 273 MET B 277 5 5 HELIX 28 28 ASN B 278 GLY B 283 1 6
SHEET 1 A 2 ARG A 6 ARG A 8 0 SHEET 2 A 2 TYR A 284 TYR A 286 1 O VAL A 285 N ARG A 8 SHEET 1 B 2 ARG B 6 ARG B 8 0 SHEET 2 B 2 TYR B 284 TYR B 286 1 O VAL B 285 N ARG B 8
LINK NE2 HIS A 231 CU CU A 402 1555 1555 1.99 LINK NE2 HIS A 42 CU CU A 401 1555 1555 2.00 LINK NE2 HIS B 60 CU CU B 401 1555 1555 2.01 LINK NE2 HIS A 69 CU CU A 401 1555 1555 2.03 LINK NE2 HIS B 208 CU CU B 402 1555 1555 2.06 LINK NE2 HIS B 69 CU CU B 401 1555 1555 2.06 LINK NE2 HIS B 231 CU CU B 402 1555 1555 2.08 LINK NE2 HIS A 208 CU CU A 402 1555 1555 2.13 LINK NE2 HIS B 42 CU CU B 401 1555 1555 2.14 LINK NE2 HIS A 204 CU CU A 402 1555 1555 2.19 LINK NE2 HIS B 204 CU CU B 402 1555 1555 2.21 LINK NE2 HIS A 60 CU CU A 401 1555 1555 2.28 LINK CU CU B 401 O HOH B 586 1555 1555 2.08 LINK CU CU A 402 O HOH A 501 1555 1555 2.20 LINK CU CU B 402 O HOH B 586 1555 1555 2.21 LINK CU CU A 401 O HOH A 501 1555 1555 2.48
CISPEP 1 THR A 50 PRO A 51 0 0.99 CISPEP 2 PRO A 180 PRO A 181 0 -0.43 CISPEP 3 GLY A 200 PRO A 201 0 -1.21 CISPEP 4 GLN A 251 PRO A 252 0 7.99 CISPEP 5 TYR A 267 PRO A 268 0 13.53 CISPEP 6 THR B 50 PRO B 51 0 -2.83 CISPEP 7 PRO B 180 PRO B 181 0 10.61 CISPEP 8 GLY B 200 PRO B 201 0 1.09 CISPEP 9 GLN B 251 PRO B 252 0 1.98 CISPEP 10 TYR B 267 PRO B 268 0 8.79
SITE 1 AC1 4 HIS A 42 HIS A 60 HIS A 69 HOH A 501 SITE 1 AC2 4 HIS A 204 HIS A 208 HIS A 231 HOH A 501 SITE 1 AC3 4 HIS B 42 HIS B 60 HIS B 69 HOH B 586 SITE 1 AC4 4 HIS B 204 HIS B 208 HIS B 231 HOH B 586
CRYST1 48.180 78.910 85.810 90.00 106.13 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.020756 0.000000 0.006003 0.00000
SCALE2 0.000000 0.012673 0.000000 0.00000
SCALE3 0.000000 0.000000 0.012131 0.00000