10 20 30 40 50 60 70 80 4HD4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER OXIDOREDUCTASE 02-OCT-12 4HD4
TITLE CRYSTAL STRUCTURE OF TYROSINASE FROM BACILLUS MEGATERIUM V218F MUTANT
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS MEGATERIUM; SOURCE 3 ORGANISM_TAXID: 1404; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET9D
KEYWDS TYROSINASE, TYPE 3 COPPER PROTEIN, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.GOLDFEDER,M.KANTEEV,N.ADIR,A.FISHMAN
REVDAT 2 13-FEB-13 4HD4 1 JRNL REVDAT 1 23-JAN-13 4HD4 0
JRNL AUTH M.GOLDFEDER,M.KANTEEV,N.ADIR,A.FISHMAN JRNL TITL INFLUENCING THE MONOPHENOLASE/DIPHENOLASE ACTIVITY RATIO IN JRNL TITL 2 TYROSINASE. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1834 629 2013 JRNL REFN ISSN 0006-3002 JRNL PMID 23305929 JRNL DOI 10.1016/J.BBAPAP.2012.12.021
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.SENDOVSKI,M.KANTEEV,V.S.BEN-YOSEF,N.ADIR,A.FISHMAN REMARK 1 TITL FIRST STRUCTURES OF AN ACTIVE BACTERIAL TYROSINASE REVEAL REMARK 1 TITL 2 COPPER PLASTICITY. REMARK 1 REF J.MOL.BIOL. V. 405 227 2011 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 21040728 REMARK 1 DOI 10.1016/J.JMB.2010.10.048
REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 54339 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 5457 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4549 - 5.5795 0.82 1455 157 0.1879 0.1797 REMARK 3 2 5.5795 - 4.4340 0.92 1596 175 0.1647 0.1587 REMARK 3 3 4.4340 - 3.8751 0.93 1605 176 0.1631 0.1835 REMARK 3 4 3.8751 - 3.5215 0.95 1622 187 0.1862 0.2096 REMARK 3 5 3.5215 - 3.2695 0.94 1604 198 0.2110 0.2330 REMARK 3 6 3.2695 - 3.0770 0.95 1618 196 0.2182 0.2338 REMARK 3 7 3.0770 - 2.9230 0.96 1655 173 0.2130 0.2417 REMARK 3 8 2.9230 - 2.7959 0.96 1647 162 0.2116 0.2087 REMARK 3 9 2.7959 - 2.6884 0.97 1649 165 0.2274 0.2335 REMARK 3 10 2.6884 - 2.5956 0.97 1667 174 0.2191 0.2480 REMARK 3 11 2.5956 - 2.5145 0.97 1652 186 0.2196 0.2656 REMARK 3 12 2.5145 - 2.4427 0.97 1645 210 0.2179 0.2500 REMARK 3 13 2.4427 - 2.3784 0.97 1621 170 0.2119 0.2377 REMARK 3 14 2.3784 - 2.3204 0.97 1669 176 0.2102 0.2168 REMARK 3 15 2.3204 - 2.2677 0.97 1648 194 0.2151 0.2330 REMARK 3 16 2.2677 - 2.2195 0.97 1670 176 0.2053 0.2416 REMARK 3 17 2.2195 - 2.1751 0.97 1595 196 0.2097 0.2293 REMARK 3 18 2.1751 - 2.1340 0.97 1690 180 0.2180 0.2345 REMARK 3 19 2.1340 - 2.0959 0.97 1617 175 0.2218 0.2452 REMARK 3 20 2.0959 - 2.0604 0.97 1665 194 0.2325 0.2692 REMARK 3 21 2.0604 - 2.0272 0.97 1654 185 0.2214 0.2594 REMARK 3 22 2.0272 - 1.9960 0.97 1571 211 0.2322 0.2431 REMARK 3 23 1.9960 - 1.9667 0.97 1659 175 0.2158 0.2554 REMARK 3 24 1.9667 - 1.9390 0.96 1640 181 0.2125 0.2799 REMARK 3 25 1.9390 - 1.9128 0.96 1579 193 0.2095 0.2643 REMARK 3 26 1.9128 - 1.8879 0.97 1676 192 0.2251 0.2550 REMARK 3 27 1.8879 - 1.8643 0.96 1622 170 0.2158 0.2485 REMARK 3 28 1.8643 - 1.8419 0.96 1624 168 0.2187 0.2423 REMARK 3 29 1.8419 - 1.8205 0.96 1631 176 0.2155 0.2511 REMARK 3 30 1.8205 - 1.8000 0.96 1636 186 0.2276 0.2835 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 40.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.34790 REMARK 3 B22 (A**2) : -3.75000 REMARK 3 B33 (A**2) : 0.39240 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.48760 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4884 REMARK 3 ANGLE : 1.222 6653 REMARK 3 CHIRALITY : 0.096 661 REMARK 3 PLANARITY : 0.006 884 REMARK 3 DIHEDRAL : 16.135 1783 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 4HD4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-OCT-12. REMARK 100 THE RCSB ID CODE IS RCSB075315.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54388 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 36.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, SODIUM CACODYLATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.29000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASN A 3 REMARK 465 ARG A 291 REMARK 465 LYS A 292 REMARK 465 SER A 293 REMARK 465 LYS A 294 REMARK 465 ARG A 295 REMARK 465 SER A 296 REMARK 465 SER A 297 REMARK 465 HIS A 298 REMARK 465 HIS A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ASN B 3 REMARK 465 LEU B 290 REMARK 465 ARG B 291 REMARK 465 LYS B 292 REMARK 465 SER B 293 REMARK 465 LYS B 294 REMARK 465 ARG B 295 REMARK 465 SER B 296 REMARK 465 SER B 297 REMARK 465 HIS B 298 REMARK 465 HIS B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 465 HIS B 302 REMARK 465 HIS B 303
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O PRO B 145 NE2 GLN B 248 1655 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS B 245 N - CA - C ANGL. DEV. = -18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 61 22.14 27.89 REMARK 500 PHE A 113 -86.25 -126.47 REMARK 500 ASN A 152 78.62 -152.59 REMARK 500 PRO A 181 32.15 -93.90 REMARK 500 LEU A 203 -122.55 39.19 REMARK 500 HIS A 245 62.68 -109.83 REMARK 500 ASN A 255 -6.48 73.47 REMARK 500 PHE B 113 -85.88 -126.23 REMARK 500 ASN B 152 78.47 -150.03 REMARK 500 PRO B 181 32.47 -94.04 REMARK 500 LEU B 203 -115.38 40.79 REMARK 500 HIS B 245 -164.28 -122.75 REMARK 500 ASN B 247 -135.12 45.39 REMARK 500 ASN B 249 -106.80 -115.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ARG B 246 23.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 60 NE2 REMARK 620 2 HIS A 69 NE2 109.5 REMARK 620 3 HIS A 42 NE2 111.5 115.0 REMARK 620 4 HOH A 619 O 93.1 116.9 108.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 42 NE2 REMARK 620 2 HIS B 69 NE2 115.2 REMARK 620 3 HOH B 616 O 104.2 106.1 REMARK 620 N 1 2
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 401
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HD6 RELATED DB: PDB REMARK 900 RELATED ID: 4HD7 RELATED DB: PDB
DBREF 4HD4 A 1 297 UNP B2ZB02 B2ZB02_BACME 1 297 DBREF 4HD4 B 1 297 UNP B2ZB02 B2ZB02_BACME 1 297
SEQADV 4HD4 GLY A 2 UNP B2ZB02 SER 2 ENGINEERED MUTATION SEQADV 4HD4 PHE A 218 UNP B2ZB02 VAL 218 ENGINEERED MUTATION SEQADV 4HD4 HIS A 298 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS A 299 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS A 300 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS A 301 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS A 302 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS A 303 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 GLY B 2 UNP B2ZB02 SER 2 ENGINEERED MUTATION SEQADV 4HD4 PHE B 218 UNP B2ZB02 VAL 218 ENGINEERED MUTATION SEQADV 4HD4 HIS B 298 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS B 299 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS B 300 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS B 301 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS B 302 UNP B2ZB02 EXPRESSION TAG SEQADV 4HD4 HIS B 303 UNP B2ZB02 EXPRESSION TAG
SEQRES 1 A 303 MET GLY ASN LYS TYR ARG VAL ARG LYS ASN VAL LEU HIS SEQRES 2 A 303 LEU THR ASP THR GLU LYS ARG ASP PHE VAL ARG THR VAL SEQRES 3 A 303 LEU ILE LEU LYS GLU LYS GLY ILE TYR ASP ARG TYR ILE SEQRES 4 A 303 ALA TRP HIS GLY ALA ALA GLY LYS PHE HIS THR PRO PRO SEQRES 5 A 303 GLY SER ASP ARG ASN ALA ALA HIS MET SER SER ALA PHE SEQRES 6 A 303 LEU PRO TRP HIS ARG GLU TYR LEU LEU ARG PHE GLU ARG SEQRES 7 A 303 ASP LEU GLN SER ILE ASN PRO GLU VAL THR LEU PRO TYR SEQRES 8 A 303 TRP GLU TRP GLU THR ASP ALA GLN MET GLN ASP PRO SER SEQRES 9 A 303 GLN SER GLN ILE TRP SER ALA ASP PHE MET GLY GLY ASN SEQRES 10 A 303 GLY ASN PRO ILE LYS ASP PHE ILE VAL ASP THR GLY PRO SEQRES 11 A 303 PHE ALA ALA GLY ARG TRP THR THR ILE ASP GLU GLN GLY SEQRES 12 A 303 ASN PRO SER GLY GLY LEU LYS ARG ASN PHE GLY ALA THR SEQRES 13 A 303 LYS GLU ALA PRO THR LEU PRO THR ARG ASP ASP VAL LEU SEQRES 14 A 303 ASN ALA LEU LYS ILE THR GLN TYR ASP THR PRO PRO TRP SEQRES 15 A 303 ASP MET THR SER GLN ASN SER PHE ARG ASN GLN LEU GLU SEQRES 16 A 303 GLY PHE ILE ASN GLY PRO GLN LEU HIS ASN ARG VAL HIS SEQRES 17 A 303 ARG TRP VAL GLY GLY GLN MET GLY VAL PHE PRO THR ALA SEQRES 18 A 303 PRO ASN ASP PRO VAL PHE PHE LEU HIS HIS ALA ASN VAL SEQRES 19 A 303 ASP ARG ILE TRP ALA VAL TRP GLN ILE ILE HIS ARG ASN SEQRES 20 A 303 GLN ASN TYR GLN PRO MET LYS ASN GLY PRO PHE GLY GLN SEQRES 21 A 303 ASN PHE ARG ASP PRO MET TYR PRO TRP ASN THR THR PRO SEQRES 22 A 303 GLU ASP VAL MET ASN HIS ARG LYS LEU GLY TYR VAL TYR SEQRES 23 A 303 ASP ILE GLU LEU ARG LYS SER LYS ARG SER SER HIS HIS SEQRES 24 A 303 HIS HIS HIS HIS SEQRES 1 B 303 MET GLY ASN LYS TYR ARG VAL ARG LYS ASN VAL LEU HIS SEQRES 2 B 303 LEU THR ASP THR GLU LYS ARG ASP PHE VAL ARG THR VAL SEQRES 3 B 303 LEU ILE LEU LYS GLU LYS GLY ILE TYR ASP ARG TYR ILE SEQRES 4 B 303 ALA TRP HIS GLY ALA ALA GLY LYS PHE HIS THR PRO PRO SEQRES 5 B 303 GLY SER ASP ARG ASN ALA ALA HIS MET SER SER ALA PHE SEQRES 6 B 303 LEU PRO TRP HIS ARG GLU TYR LEU LEU ARG PHE GLU ARG SEQRES 7 B 303 ASP LEU GLN SER ILE ASN PRO GLU VAL THR LEU PRO TYR SEQRES 8 B 303 TRP GLU TRP GLU THR ASP ALA GLN MET GLN ASP PRO SER SEQRES 9 B 303 GLN SER GLN ILE TRP SER ALA ASP PHE MET GLY GLY ASN SEQRES 10 B 303 GLY ASN PRO ILE LYS ASP PHE ILE VAL ASP THR GLY PRO SEQRES 11 B 303 PHE ALA ALA GLY ARG TRP THR THR ILE ASP GLU GLN GLY SEQRES 12 B 303 ASN PRO SER GLY GLY LEU LYS ARG ASN PHE GLY ALA THR SEQRES 13 B 303 LYS GLU ALA PRO THR LEU PRO THR ARG ASP ASP VAL LEU SEQRES 14 B 303 ASN ALA LEU LYS ILE THR GLN TYR ASP THR PRO PRO TRP SEQRES 15 B 303 ASP MET THR SER GLN ASN SER PHE ARG ASN GLN LEU GLU SEQRES 16 B 303 GLY PHE ILE ASN GLY PRO GLN LEU HIS ASN ARG VAL HIS SEQRES 17 B 303 ARG TRP VAL GLY GLY GLN MET GLY VAL PHE PRO THR ALA SEQRES 18 B 303 PRO ASN ASP PRO VAL PHE PHE LEU HIS HIS ALA ASN VAL SEQRES 19 B 303 ASP ARG ILE TRP ALA VAL TRP GLN ILE ILE HIS ARG ASN SEQRES 20 B 303 GLN ASN TYR GLN PRO MET LYS ASN GLY PRO PHE GLY GLN SEQRES 21 B 303 ASN PHE ARG ASP PRO MET TYR PRO TRP ASN THR THR PRO SEQRES 22 B 303 GLU ASP VAL MET ASN HIS ARG LYS LEU GLY TYR VAL TYR SEQRES 23 B 303 ASP ILE GLU LEU ARG LYS SER LYS ARG SER SER HIS HIS SEQRES 24 B 303 HIS HIS HIS HIS
HET CU A 401 1 HET CU B 401 1
HETNAM CU COPPER (II) ION
FORMUL 3 CU 2(CU 2+) FORMUL 5 HOH *236(H2 O)
HELIX 1 1 ASN A 10 LEU A 14 5 5 HELIX 2 2 THR A 15 LYS A 32 1 18 HELIX 3 3 ILE A 34 LYS A 47 1 14 HELIX 4 4 ALA A 64 ASN A 84 1 21 HELIX 5 5 GLU A 93 ALA A 98 1 6 HELIX 6 6 ASP A 102 SER A 110 5 9 HELIX 7 7 ASN A 119 ASP A 123 5 5 HELIX 8 8 THR A 164 LYS A 173 1 10 HELIX 9 9 SER A 189 GLY A 196 1 8 HELIX 10 10 GLN A 202 GLY A 212 1 11 HELIX 11 11 GLY A 213 ASP A 224 5 12 HELIX 12 12 PRO A 225 HIS A 245 1 21 HELIX 13 13 THR A 272 MET A 277 5 6 HELIX 14 14 ASN A 278 LEU A 282 5 5 HELIX 15 15 ILE A 288 LEU A 290 5 3 HELIX 16 16 ASN B 10 LEU B 14 5 5 HELIX 17 17 THR B 15 LYS B 32 1 18 HELIX 18 18 GLY B 33 LYS B 47 1 15 HELIX 19 19 ALA B 64 ASN B 84 1 21 HELIX 20 20 GLU B 93 ALA B 98 1 6 HELIX 21 21 ASP B 102 SER B 110 5 9 HELIX 22 22 ASN B 119 ASP B 123 5 5 HELIX 23 23 THR B 164 LYS B 173 1 10 HELIX 24 24 SER B 189 GLY B 196 1 8 HELIX 25 25 GLN B 202 GLY B 212 1 11 HELIX 26 26 GLY B 213 ASP B 224 5 12 HELIX 27 27 PRO B 225 HIS B 245 1 21 HELIX 28 28 PRO B 273 MET B 277 5 5
SHEET 1 A 2 ARG A 6 ARG A 8 0 SHEET 2 A 2 TYR A 284 TYR A 286 1 O VAL A 285 N ARG A 8 SHEET 1 B 2 ARG B 6 ARG B 8 0 SHEET 2 B 2 TYR B 284 TYR B 286 1 O VAL B 285 N ARG B 8
LINK NE2AHIS A 60 CU CU A 401 1555 1555 1.99 LINK NE2 HIS A 69 CU CU A 401 1555 1555 2.19 LINK NE2 HIS B 42 CU CU B 401 1555 1555 2.22 LINK NE2 HIS A 42 CU CU A 401 1555 1555 2.22 LINK NE2 HIS B 69 CU CU B 401 1555 1555 2.27 LINK CU CU B 401 O HOH B 616 1555 1555 2.00 LINK CU CU A 401 O HOH A 619 1555 1555 2.07
CISPEP 1 THR A 50 PRO A 51 0 -0.77 CISPEP 2 PRO A 180 PRO A 181 0 7.93 CISPEP 3 GLY A 200 PRO A 201 0 3.01 CISPEP 4 GLN A 251 PRO A 252 0 4.27 CISPEP 5 TYR A 267 PRO A 268 0 9.73 CISPEP 6 THR B 50 PRO B 51 0 0.86 CISPEP 7 PRO B 180 PRO B 181 0 8.73 CISPEP 8 GLY B 200 PRO B 201 0 -0.57 CISPEP 9 ARG B 246 ASN B 247 0 -8.21 CISPEP 10 GLN B 251 PRO B 252 0 4.27 CISPEP 11 TYR B 267 PRO B 268 0 12.25
SITE 1 AC1 5 HIS A 42 HIS A 60 HIS A 69 PHE A 218 SITE 2 AC1 5 HOH A 619 SITE 1 AC2 4 HIS B 42 HIS B 69 PHE B 218 HOH B 616
CRYST1 48.000 78.580 85.890 90.00 106.13 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.020833 0.000000 0.006025 0.00000
SCALE2 0.000000 0.012726 0.000000 0.00000
SCALE3 0.000000 0.000000 0.012120 0.00000