10 20 30 40 50 60 70 80 4ARN - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER IMMUNE SYSTEM 25-APR-12 4ARN
TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF DROSOPHILA TOLL RECEPTOR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL RECEPTOR, VARIABLE LYMPHOCYTE RECEPTOR B.61 CHIMERA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: TOLL RECEPTOR RESIDUES 28-228, VARIABLE LYMPHOCYTE RECEPTOR COMPND 5 B.61 RESIDUES 131-201; COMPND 6 SYNONYM: TOLL, VARIABLE LYMPHOCYTE RECEPTOR B; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: CHIMERIC PROTEIN
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER, EPTATRETUS BURGERI; SOURCE 3 ORGANISM_COMMON: FRUIT FLY, INSHORE HAGFISH; SOURCE 4 ORGANISM_TAXID: 7227, 7764; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBAC-1
KEYWDS IMMUNE SYSTEM, CYTOKINE RECEPTOR, EMBRYONIC DEVELOPMENT, INNATE KEYWDS 2 IMMUNITY, LEUCINE-RICH REPEAT, LRR HYBRID TECHNOLOGY
EXPDTA X-RAY DIFFRACTION
AUTHOR M.GANGLOFF,N.J.GAY
REVDAT 4 15-MAR-17 4ARN 1 SOURCE REVDAT 3 08-MAY-13 4ARN 1 REMARK REVDAT 2 27-FEB-13 4ARN 1 REMARK REVDAT 1 23-JAN-13 4ARN 0
JRNL AUTH M.GANGLOFF,C.J.ARNOT,M.LEWIS,N.J.GAY JRNL TITL FUNCTIONAL INSIGHTS FROM THE CRYSTAL STRUCTURE OF THE JRNL TITL 2 N-TERMINAL DOMAIN OF THE PROTOTYPICAL TOLL RECEPTOR. JRNL REF STRUCTURE V. 21 143 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23245851 JRNL DOI 10.1016/J.STR.2012.11.003
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.GANGLOFF,A.MORENO,N.J.GAY REMARK 1 TITL LIESEGANG-LIKE PATTERNS OF TOLL CRYSTALS GROWN IN GEL. REMARK 1 REF J.APPL.CRYSTALLOGR. V. 46 337 2013 REMARK 1 REFN ISSN 0021-8898 REMARK 1 PMID 23596340 REMARK 1 DOI 10.1107/S0021889812051606
REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 72763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3668 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.47 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.61 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5303 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2402 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5028 REMARK 3 BIN R VALUE (WORKING SET) : 0.2391 REMARK 3 BIN FREE R VALUE : 0.2587 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.19 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 275 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8688 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 245 REMARK 3 SOLVENT ATOMS : 323 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -13.67310 REMARK 3 B22 (A**2) : 2.36370 REMARK 3 B33 (A**2) : 11.30930 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.395 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.249 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.185 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.246 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.185 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 9176 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 12449 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 4415 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 226 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1312 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 9176 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1280 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 9860 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.54 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.93 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 28.1347 7.6218 33.5971 REMARK 3 T TENSOR REMARK 3 T11: -0.0195 T22: -0.1743 REMARK 3 T33: -0.2197 T12: -0.0002 REMARK 3 T13: 0.0205 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.7549 L22: 4.0248 REMARK 3 L33: 1.5321 L12: 0.4909 REMARK 3 L13: 0.1664 L23: 0.2331 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: -0.0391 S13: -0.0180 REMARK 3 S21: 0.2077 S22: -0.0578 S23: 0.1701 REMARK 3 S31: 0.4006 S32: -0.1610 S33: 0.0091 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 56.1989 41.0237 23.3205 REMARK 3 T TENSOR REMARK 3 T11: -0.0596 T22: -0.0897 REMARK 3 T33: -0.2037 T12: -0.0569 REMARK 3 T13: -0.0103 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 3.7014 L22: 0.8109 REMARK 3 L33: 1.3145 L12: 0.9159 REMARK 3 L13: 0.5826 L23: 0.5630 REMARK 3 S TENSOR REMARK 3 S11: -0.2474 S12: 0.3363 S13: 0.2866 REMARK 3 S21: -0.1697 S22: 0.2568 S23: 0.0867 REMARK 3 S31: -0.3209 S32: 0.3412 S33: -0.0094 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 21.1084 10.2195 4.3489 REMARK 3 T TENSOR REMARK 3 T11: -0.2810 T22: 0.0667 REMARK 3 T33: -0.2878 T12: 0.0127 REMARK 3 T13: -0.0072 T23: -0.0413 REMARK 3 L TENSOR REMARK 3 L11: 2.4984 L22: 3.4456 REMARK 3 L33: 1.9207 L12: -2.1054 REMARK 3 L13: 0.3203 L23: -0.2555 REMARK 3 S TENSOR REMARK 3 S11: 0.0876 S12: 0.5053 S13: -0.0082 REMARK 3 S21: -0.0200 S22: -0.4549 S23: 0.0791 REMARK 3 S31: 0.3851 S32: -0.0606 S33: 0.3673 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 53.0692 46.3562 52.5730 REMARK 3 T TENSOR REMARK 3 T11: 0.1425 T22: -0.3040 REMARK 3 T33: -0.2685 T12: 0.0057 REMARK 3 T13: 0.0197 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 3.8681 L22: 1.6757 REMARK 3 L33: 1.7706 L12: -0.7628 REMARK 3 L13: 0.7946 L23: 0.0274 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: 0.0609 S13: 0.1217 REMARK 3 S21: 0.1663 S22: -0.0770 S23: 0.1573 REMARK 3 S31: 0.0793 S32: 0.2906 S33: 0.0411 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT NOTE 1: IDEAL-DIST CONTACT REMARK 3 TERM CONTACT SETUP. ALL ATOMS HAVE CCP4 ATOM
REMARK 4 REMARK 4 4ARN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-APR-12. REMARK 100 THE PDBE ID CODE IS EBI-52136.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72977 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX AUTOMR REMARK 200 STARTING MODEL: PDB ENTRY 4ARR REMARK 200 REMARK 200 REMARK: NONE
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.39350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.67100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.63800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 112.67100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.39350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.63800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 305 REMARK 465 GLN A 306 REMARK 465 GLU B 301 REMARK 465 ASN B 302 REMARK 465 LEU B 303 REMARK 465 TYR B 304 REMARK 465 PHE B 305 REMARK 465 GLN B 306 REMARK 465 GLU C 301 REMARK 465 ASN C 302 REMARK 465 LEU C 303 REMARK 465 TYR C 304 REMARK 465 PHE C 305 REMARK 465 GLN C 306 REMARK 465 GLY D 300 REMARK 465 GLU D 301 REMARK 465 ASN D 302 REMARK 465 LEU D 303 REMARK 465 TYR D 304 REMARK 465 PHE D 305 REMARK 465 GLN D 306
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 147 CG OD1 OD2 REMARK 470 LEU A 303 CG CD1 CD2 REMARK 470 ARG B 31 CG CD NE CZ NH1 NH2 REMARK 470 SER B 38 OG REMARK 470 ILE B 39 CG1 CG2 CD1 REMARK 470 ASP B 40 CG OD1 OD2 REMARK 470 LYS B 72 CG CD CE NZ REMARK 470 SER C 38 OG REMARK 470 ILE C 39 CG1 CG2 CD1 REMARK 470 ASP C 40 CG OD1 OD2 REMARK 470 SER D 35 OG REMARK 470 SER D 38 OG REMARK 470 ILE D 39 CG1 CG2 CD1 REMARK 470 ASP D 40 CG OD1 OD2 REMARK 470 LEU D 42 CG CD1 CD2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 140 C1 NAG B 501 1.40 REMARK 500 ND2 ASN D 175 C1 NAG D 601 1.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 49 -124.65 65.98 REMARK 500 ASP A 73 -79.84 -141.25 REMARK 500 LYS A 93 14.80 56.60 REMARK 500 PRO A 110 49.44 -71.61 REMARK 500 SER A 126 66.68 36.56 REMARK 500 ASP A 172 -2.81 75.57 REMARK 500 ASP A 195 -0.94 69.81 REMARK 500 ASN A 207 -157.41 -105.94 REMARK 500 ASN A 231 -158.96 -126.17 REMARK 500 MET B 49 -112.81 58.54 REMARK 500 LYS B 72 -17.20 69.47 REMARK 500 ASP B 73 -79.59 -98.75 REMARK 500 ASN B 80 83.97 -151.28 REMARK 500 PRO B 110 45.96 -71.52 REMARK 500 SER B 126 73.79 30.82 REMARK 500 ASN B 136 77.52 -114.73 REMARK 500 ASP B 172 47.18 -106.97 REMARK 500 MET B 173 49.79 -107.02 REMARK 500 ALA B 183 30.52 -142.19 REMARK 500 HIS B 191 42.46 -109.96 REMARK 500 LEU B 196 67.36 -118.22 REMARK 500 ASN B 207 -151.57 -105.77 REMARK 500 ASN B 231 -159.64 -121.37 REMARK 500 ASP C 40 79.27 -153.35 REMARK 500 MET C 49 -112.02 58.93 REMARK 500 ASP C 73 -65.25 -123.46 REMARK 500 ASN C 136 75.58 -111.63 REMARK 500 ALA C 183 32.05 -141.09 REMARK 500 LEU C 196 74.07 -118.09 REMARK 500 ASN C 207 -156.63 -112.60 REMARK 500 LYS C 219 61.30 -114.54 REMARK 500 ASN C 231 -157.66 -117.08 REMARK 500 LEU C 244 57.22 -93.21 REMARK 500 ASN C 274 51.40 -118.74 REMARK 500 THR C 299 -58.01 -122.76 REMARK 500 LEU D 42 -57.39 71.16 REMARK 500 MET D 49 -107.37 60.64 REMARK 500 LYS D 72 -15.62 70.56 REMARK 500 ASP D 73 -65.05 -99.58 REMARK 500 ASN D 80 87.73 -153.27 REMARK 500 LYS D 93 53.38 -101.52 REMARK 500 HIS D 112 58.23 -100.58 REMARK 500 ASN D 136 79.18 -111.56 REMARK 500 ASN D 207 -156.45 -106.50 REMARK 500 LYS D 219 60.68 -117.95 REMARK 500 ASN D 231 -160.40 -113.99 REMARK 500 REMARK 500 REMARK: NULL
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG B 501 REMARK 610 NAG D 601
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG D 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR MONO-SACCHARIDE NAG A 401 BOUND REMARK 800 TO ASN A 80 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A REMARK 800 140 RESIDUES 501 TO 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR MONO-SACCHARIDE NAG B 401 BOUND REMARK 800 TO ASN B 80 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR MONO-SACCHARIDE NAG B 601 BOUND REMARK 800 TO ASN B 175 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C REMARK 800 80 RESIDUES 401 TO 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C REMARK 800 140 RESIDUES 501 TO 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D REMARK 800 80 RESIDUES 401 TO 402
REMARK 999 REMARK 999 SEQUENCE REMARK 999 VARIABLE LYMPHOCYTE RECEPTOR B.61 (GENBANK AAZ16361)
DBREF 4ARN A 28 228 UNP P08953 TOLL_DROME 28 228 DBREF 4ARN A 229 299 UNP Q4G1L2 Q4G1L2_EPTBU 131 201 DBREF 4ARN B 28 228 UNP P08953 TOLL_DROME 28 228 DBREF 4ARN B 229 299 UNP Q4G1L2 Q4G1L2_EPTBU 131 201 DBREF 4ARN C 28 228 UNP P08953 TOLL_DROME 28 228 DBREF 4ARN C 229 299 UNP Q4G1L2 Q4G1L2_EPTBU 131 201 DBREF 4ARN D 28 228 UNP P08953 TOLL_DROME 28 228 DBREF 4ARN D 229 299 UNP Q4G1L2 Q4G1L2_EPTBU 131 201
SEQADV 4ARN ALA A 229 UNP Q4G1L2 ASP 131 CLONING ARTIFACT SEQADV 4ARN SER A 230 UNP Q4G1L2 THR 132 CLONING ARTIFACT SEQADV 4ARN GLY A 300 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLU A 301 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN ASN A 302 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN LEU A 303 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN TYR A 304 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN PHE A 305 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLN A 306 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN ALA B 229 UNP Q4G1L2 ASP 131 CLONING ARTIFACT SEQADV 4ARN SER B 230 UNP Q4G1L2 THR 132 CLONING ARTIFACT SEQADV 4ARN GLY B 300 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLU B 301 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN ASN B 302 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN LEU B 303 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN TYR B 304 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN PHE B 305 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLN B 306 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN ALA C 229 UNP Q4G1L2 ASP 131 CLONING ARTIFACT SEQADV 4ARN SER C 230 UNP Q4G1L2 THR 132 CLONING ARTIFACT SEQADV 4ARN GLY C 300 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLU C 301 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN ASN C 302 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN LEU C 303 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN TYR C 304 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN PHE C 305 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLN C 306 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN ALA D 229 UNP Q4G1L2 ASP 131 CLONING ARTIFACT SEQADV 4ARN SER D 230 UNP Q4G1L2 THR 132 CLONING ARTIFACT SEQADV 4ARN GLY D 300 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLU D 301 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN ASN D 302 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN LEU D 303 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN TYR D 304 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN PHE D 305 UNP Q4G1L2 EXPRESSION TAG SEQADV 4ARN GLN D 306 UNP Q4G1L2 EXPRESSION TAG
SEQRES 1 A 279 SER PHE GLY ARG ASP ALA CYS SER GLU MET SER ILE ASP SEQRES 2 A 279 GLY LEU CYS GLN CYS ALA PRO ILE MET SER GLU TYR GLU SEQRES 3 A 279 ILE ILE CYS PRO ALA ASN ALA GLU ASN PRO THR PHE ARG SEQRES 4 A 279 LEU THR ILE GLN PRO LYS ASP TYR VAL GLN ILE MET CYS SEQRES 5 A 279 ASN LEU THR ASP THR THR ASP TYR GLN GLN LEU PRO LYS SEQRES 6 A 279 LYS LEU ARG ILE GLY GLU VAL ASP ARG VAL GLN MET ARG SEQRES 7 A 279 ARG CYS MET LEU PRO GLY HIS THR PRO ILE ALA SER ILE SEQRES 8 A 279 LEU ASP TYR LEU GLY ILE VAL SER PRO THR THR LEU ILE SEQRES 9 A 279 PHE GLU SER ASP ASN LEU GLY MET ASN ILE THR ARG GLN SEQRES 10 A 279 HIS LEU ASP ARG LEU HIS GLY LEU LYS ARG PHE ARG PHE SEQRES 11 A 279 THR THR ARG ARG LEU THR HIS ILE PRO ALA ASN LEU LEU SEQRES 12 A 279 THR ASP MET ARG ASN LEU SER HIS LEU GLU LEU ARG ALA SEQRES 13 A 279 ASN ILE GLU GLU MET PRO SER HIS LEU PHE ASP ASP LEU SEQRES 14 A 279 GLU ASN LEU GLU SER ILE GLU PHE GLY SER ASN LYS LEU SEQRES 15 A 279 ARG GLN MET PRO ARG GLY ILE PHE GLY LYS MET PRO LYS SEQRES 16 A 279 LEU LYS GLN LEU ASN LEU ALA SER ASN GLN LEU LYS SER SEQRES 17 A 279 VAL PRO ASP GLY ILE PHE ASP ARG LEU THR SER LEU GLN SEQRES 18 A 279 LYS ILE TRP LEU HIS THR ASN PRO TRP ASP CYS SER CYS SEQRES 19 A 279 PRO ARG ILE ASP TYR LEU SER ARG TRP LEU ASN LYS ASN SEQRES 20 A 279 SER GLN LYS GLU GLN GLY SER ALA LYS CYS SER GLY SER SEQRES 21 A 279 GLY LYS PRO VAL ARG SER ILE ILE CYS PRO THR THR GLY SEQRES 22 A 279 GLU ASN LEU TYR PHE GLN SEQRES 1 B 279 SER PHE GLY ARG ASP ALA CYS SER GLU MET SER ILE ASP SEQRES 2 B 279 GLY LEU CYS GLN CYS ALA PRO ILE MET SER GLU TYR GLU SEQRES 3 B 279 ILE ILE CYS PRO ALA ASN ALA GLU ASN PRO THR PHE ARG SEQRES 4 B 279 LEU THR ILE GLN PRO LYS ASP TYR VAL GLN ILE MET CYS SEQRES 5 B 279 ASN LEU THR ASP THR THR ASP TYR GLN GLN LEU PRO LYS SEQRES 6 B 279 LYS LEU ARG ILE GLY GLU VAL ASP ARG VAL GLN MET ARG SEQRES 7 B 279 ARG CYS MET LEU PRO GLY HIS THR PRO ILE ALA SER ILE SEQRES 8 B 279 LEU ASP TYR LEU GLY ILE VAL SER PRO THR THR LEU ILE SEQRES 9 B 279 PHE GLU SER ASP ASN LEU GLY MET ASN ILE THR ARG GLN SEQRES 10 B 279 HIS LEU ASP ARG LEU HIS GLY LEU LYS ARG PHE ARG PHE SEQRES 11 B 279 THR THR ARG ARG LEU THR HIS ILE PRO ALA ASN LEU LEU SEQRES 12 B 279 THR ASP MET ARG ASN LEU SER HIS LEU GLU LEU ARG ALA SEQRES 13 B 279 ASN ILE GLU GLU MET PRO SER HIS LEU PHE ASP ASP LEU SEQRES 14 B 279 GLU ASN LEU GLU SER ILE GLU PHE GLY SER ASN LYS LEU SEQRES 15 B 279 ARG GLN MET PRO ARG GLY ILE PHE GLY LYS MET PRO LYS SEQRES 16 B 279 LEU LYS GLN LEU ASN LEU ALA SER ASN GLN LEU LYS SER SEQRES 17 B 279 VAL PRO ASP GLY ILE PHE ASP ARG LEU THR SER LEU GLN SEQRES 18 B 279 LYS ILE TRP LEU HIS THR ASN PRO TRP ASP CYS SER CYS SEQRES 19 B 279 PRO ARG ILE ASP TYR LEU SER ARG TRP LEU ASN LYS ASN SEQRES 20 B 279 SER GLN LYS GLU GLN GLY SER ALA LYS CYS SER GLY SER SEQRES 21 B 279 GLY LYS PRO VAL ARG SER ILE ILE CYS PRO THR THR GLY SEQRES 22 B 279 GLU ASN LEU TYR PHE GLN SEQRES 1 C 279 SER PHE GLY ARG ASP ALA CYS SER GLU MET SER ILE ASP SEQRES 2 C 279 GLY LEU CYS GLN CYS ALA PRO ILE MET SER GLU TYR GLU SEQRES 3 C 279 ILE ILE CYS PRO ALA ASN ALA GLU ASN PRO THR PHE ARG SEQRES 4 C 279 LEU THR ILE GLN PRO LYS ASP TYR VAL GLN ILE MET CYS SEQRES 5 C 279 ASN LEU THR ASP THR THR ASP TYR GLN GLN LEU PRO LYS SEQRES 6 C 279 LYS LEU ARG ILE GLY GLU VAL ASP ARG VAL GLN MET ARG SEQRES 7 C 279 ARG CYS MET LEU PRO GLY HIS THR PRO ILE ALA SER ILE SEQRES 8 C 279 LEU ASP TYR LEU GLY ILE VAL SER PRO THR THR LEU ILE SEQRES 9 C 279 PHE GLU SER ASP ASN LEU GLY MET ASN ILE THR ARG GLN SEQRES 10 C 279 HIS LEU ASP ARG LEU HIS GLY LEU LYS ARG PHE ARG PHE SEQRES 11 C 279 THR THR ARG ARG LEU THR HIS ILE PRO ALA ASN LEU LEU SEQRES 12 C 279 THR ASP MET ARG ASN LEU SER HIS LEU GLU LEU ARG ALA SEQRES 13 C 279 ASN ILE GLU GLU MET PRO SER HIS LEU PHE ASP ASP LEU SEQRES 14 C 279 GLU ASN LEU GLU SER ILE GLU PHE GLY SER ASN LYS LEU SEQRES 15 C 279 ARG GLN MET PRO ARG GLY ILE PHE GLY LYS MET PRO LYS SEQRES 16 C 279 LEU LYS GLN LEU ASN LEU ALA SER ASN GLN LEU LYS SER SEQRES 17 C 279 VAL PRO ASP GLY ILE PHE ASP ARG LEU THR SER LEU GLN SEQRES 18 C 279 LYS ILE TRP LEU HIS THR ASN PRO TRP ASP CYS SER CYS SEQRES 19 C 279 PRO ARG ILE ASP TYR LEU SER ARG TRP LEU ASN LYS ASN SEQRES 20 C 279 SER GLN LYS GLU GLN GLY SER ALA LYS CYS SER GLY SER SEQRES 21 C 279 GLY LYS PRO VAL ARG SER ILE ILE CYS PRO THR THR GLY SEQRES 22 C 279 GLU ASN LEU TYR PHE GLN SEQRES 1 D 279 SER PHE GLY ARG ASP ALA CYS SER GLU MET SER ILE ASP SEQRES 2 D 279 GLY LEU CYS GLN CYS ALA PRO ILE MET SER GLU TYR GLU SEQRES 3 D 279 ILE ILE CYS PRO ALA ASN ALA GLU ASN PRO THR PHE ARG SEQRES 4 D 279 LEU THR ILE GLN PRO LYS ASP TYR VAL GLN ILE MET CYS SEQRES 5 D 279 ASN LEU THR ASP THR THR ASP TYR GLN GLN LEU PRO LYS SEQRES 6 D 279 LYS LEU ARG ILE GLY GLU VAL ASP ARG VAL GLN MET ARG SEQRES 7 D 279 ARG CYS MET LEU PRO GLY HIS THR PRO ILE ALA SER ILE SEQRES 8 D 279 LEU ASP TYR LEU GLY ILE VAL SER PRO THR THR LEU ILE SEQRES 9 D 279 PHE GLU SER ASP ASN LEU GLY MET ASN ILE THR ARG GLN SEQRES 10 D 279 HIS LEU ASP ARG LEU HIS GLY LEU LYS ARG PHE ARG PHE SEQRES 11 D 279 THR THR ARG ARG LEU THR HIS ILE PRO ALA ASN LEU LEU SEQRES 12 D 279 THR ASP MET ARG ASN LEU SER HIS LEU GLU LEU ARG ALA SEQRES 13 D 279 ASN ILE GLU GLU MET PRO SER HIS LEU PHE ASP ASP LEU SEQRES 14 D 279 GLU ASN LEU GLU SER ILE GLU PHE GLY SER ASN LYS LEU SEQRES 15 D 279 ARG GLN MET PRO ARG GLY ILE PHE GLY LYS MET PRO LYS SEQRES 16 D 279 LEU LYS GLN LEU ASN LEU ALA SER ASN GLN LEU LYS SER SEQRES 17 D 279 VAL PRO ASP GLY ILE PHE ASP ARG LEU THR SER LEU GLN SEQRES 18 D 279 LYS ILE TRP LEU HIS THR ASN PRO TRP ASP CYS SER CYS SEQRES 19 D 279 PRO ARG ILE ASP TYR LEU SER ARG TRP LEU ASN LYS ASN SEQRES 20 D 279 SER GLN LYS GLU GLN GLY SER ALA LYS CYS SER GLY SER SEQRES 21 D 279 GLY LYS PRO VAL ARG SER ILE ILE CYS PRO THR THR GLY SEQRES 22 D 279 GLU ASN LEU TYR PHE GLN
MODRES 4ARN ASN A 80 ASN GLYCOSYLATION SITE MODRES 4ARN ASN A 140 ASN GLYCOSYLATION SITE MODRES 4ARN ASN B 80 ASN GLYCOSYLATION SITE MODRES 4ARN ASN B 175 ASN GLYCOSYLATION SITE MODRES 4ARN ASN C 80 ASN GLYCOSYLATION SITE MODRES 4ARN ASN C 140 ASN GLYCOSYLATION SITE MODRES 4ARN ASN D 80 ASN GLYCOSYLATION SITE
HET NAG A 401 14 HET NAG A 501 14 HET FUC A 502 10 HET MLI A 601 7 HET NAG B 401 14 HET NAG B 501 14 HET NAG B 601 14 HET MLI B 602 7 HET NAG C 401 14 HET NAG C 402 14 HET NAG C 501 14 HET NAG C 502 14 HET BMA C 503 11 HET FUC C 504 10 HET FUC C 505 10 HET MAN C 506 11 HET BMA C 507 11 HET NAG D 401 14 HET NAG D 402 14 HET NAG D 601 14
HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM FUC ALPHA-L-FUCOSE HETNAM MLI MALONATE ION HETNAM BMA BETA-D-MANNOSE HETNAM MAN ALPHA-D-MANNOSE
FORMUL 5 NAG 12(C8 H15 N O6) FORMUL 6 FUC 3(C6 H12 O5) FORMUL 7 MLI 2(C3 H2 O4 2-) FORMUL 13 BMA 2(C6 H12 O6) FORMUL 13 MAN C6 H12 O6 FORMUL 16 HOH *323(H2 O)
HELIX 1 1 GLY A 30 GLY A 41 1 12 HELIX 2 2 ASP A 83 LEU A 90 5 8 HELIX 3 3 ILE A 115 LEU A 122 1 8 HELIX 4 4 THR A 142 ASP A 147 5 6 HELIX 5 5 ILE A 264 ASN A 274 1 11 HELIX 6 6 VAL A 291 ILE A 294 5 4 HELIX 7 7 GLY B 30 MET B 37 1 8 HELIX 8 8 SER B 38 ASP B 40 5 3 HELIX 9 9 ASP B 83 LEU B 90 5 8 HELIX 10 10 ILE B 115 LEU B 122 1 8 HELIX 11 11 THR B 142 ASP B 147 5 6 HELIX 12 12 ILE B 264 ASN B 274 1 11 HELIX 13 13 VAL B 291 ILE B 294 5 4 HELIX 14 14 GLY C 30 GLU C 36 1 7 HELIX 15 15 ASP C 83 LEU C 90 5 8 HELIX 16 16 ILE C 115 LEU C 122 1 8 HELIX 17 17 ARG C 143 ASP C 147 5 5 HELIX 18 18 ILE C 264 ASN C 274 1 11 HELIX 19 19 VAL C 291 ILE C 294 5 4 HELIX 20 20 GLY D 30 GLU D 36 1 7 HELIX 21 21 GLU D 36 GLY D 41 1 6 HELIX 22 22 ASP D 83 LEU D 90 5 8 HELIX 23 23 ILE D 115 LEU D 122 1 8 HELIX 24 24 ARG D 143 ASP D 147 5 5 HELIX 25 25 ILE D 264 ASN D 274 1 11 HELIX 26 26 VAL D 291 ILE D 294 5 4
SHEET 1 AA12 GLN A 44 ILE A 48 0 SHEET 2 AA12 GLU A 51 CYS A 56 -1 O GLU A 51 N ILE A 48 SHEET 3 AA12 PHE A 65 GLN A 70 -1 O PHE A 65 N CYS A 56 SHEET 4 AA12 TYR A 74 CYS A 79 -1 O TYR A 74 N GLN A 70 SHEET 5 AA12 ARG A 101 ARG A 105 1 O ARG A 101 N VAL A 75 SHEET 6 AA12 THR A 129 GLU A 133 1 O THR A 129 N VAL A 102 SHEET 7 AA12 ARG A 154 THR A 158 1 O ARG A 154 N LEU A 130 SHEET 8 AA12 HIS A 178 ARG A 182 1 O HIS A 178 N PHE A 155 SHEET 9 AA12 SER A 201 GLU A 203 1 O SER A 201 N LEU A 179 SHEET 10 AA12 GLN A 225 ASN A 227 1 O GLN A 225 N ILE A 202 SHEET 11 AA12 LYS A 249 TRP A 251 1 O LYS A 249 N LEU A 226 SHEET 12 AA12 GLU A 278 GLN A 279 1 N GLN A 279 O ILE A 250 SHEET 1 AB 2 GLY A 97 GLU A 98 0 SHEET 2 AB 2 ILE A 124 VAL A 125 1 N VAL A 125 O GLY A 97 SHEET 1 BA12 GLN B 44 ILE B 48 0 SHEET 2 BA12 GLU B 51 CYS B 56 -1 O GLU B 51 N ILE B 48 SHEET 3 BA12 PHE B 65 GLN B 70 -1 O PHE B 65 N CYS B 56 SHEET 4 BA12 TYR B 74 CYS B 79 -1 O TYR B 74 N GLN B 70 SHEET 5 BA12 ARG B 101 ARG B 105 1 O ARG B 101 N VAL B 75 SHEET 6 BA12 THR B 129 GLU B 133 1 O THR B 129 N VAL B 102 SHEET 7 BA12 ARG B 154 THR B 158 1 O ARG B 154 N LEU B 130 SHEET 8 BA12 HIS B 178 ARG B 182 1 O HIS B 178 N PHE B 155 SHEET 9 BA12 SER B 201 GLU B 203 1 O SER B 201 N LEU B 179 SHEET 10 BA12 GLN B 225 ASN B 227 1 O GLN B 225 N ILE B 202 SHEET 11 BA12 LYS B 249 TRP B 251 1 O LYS B 249 N LEU B 226 SHEET 12 BA12 GLU B 278 GLN B 279 1 N GLN B 279 O ILE B 250 SHEET 1 BB 2 GLY B 97 GLU B 98 0 SHEET 2 BB 2 ILE B 124 VAL B 125 1 N VAL B 125 O GLY B 97 SHEET 1 CA12 GLN C 44 ILE C 48 0 SHEET 2 CA12 GLU C 51 CYS C 56 -1 O GLU C 51 N ILE C 48 SHEET 3 CA12 PHE C 65 GLN C 70 -1 O PHE C 65 N CYS C 56 SHEET 4 CA12 TYR C 74 CYS C 79 -1 O TYR C 74 N GLN C 70 SHEET 5 CA12 ARG C 101 ARG C 105 1 O ARG C 101 N VAL C 75 SHEET 6 CA12 THR C 129 GLU C 133 1 O THR C 129 N VAL C 102 SHEET 7 CA12 ARG C 154 THR C 158 1 O ARG C 154 N LEU C 130 SHEET 8 CA12 HIS C 178 ARG C 182 1 O HIS C 178 N PHE C 155 SHEET 9 CA12 SER C 201 GLU C 203 1 O SER C 201 N LEU C 179 SHEET 10 CA12 GLN C 225 ASN C 227 1 O GLN C 225 N ILE C 202 SHEET 11 CA12 LYS C 249 TRP C 251 1 O LYS C 249 N LEU C 226 SHEET 12 CA12 GLU C 278 GLN C 279 1 N GLN C 279 O ILE C 250 SHEET 1 CB 2 GLY C 97 GLU C 98 0 SHEET 2 CB 2 ILE C 124 VAL C 125 1 N VAL C 125 O GLY C 97 SHEET 1 DA12 GLN D 44 ILE D 48 0 SHEET 2 DA12 GLU D 51 CYS D 56 -1 O GLU D 51 N ILE D 48 SHEET 3 DA12 PHE D 65 GLN D 70 -1 O PHE D 65 N CYS D 56 SHEET 4 DA12 TYR D 74 CYS D 79 -1 O TYR D 74 N GLN D 70 SHEET 5 DA12 ARG D 101 ARG D 105 1 O ARG D 101 N VAL D 75 SHEET 6 DA12 THR D 129 GLU D 133 1 O THR D 129 N VAL D 102 SHEET 7 DA12 ARG D 154 THR D 158 1 O ARG D 154 N LEU D 130 SHEET 8 DA12 HIS D 178 ARG D 182 1 O HIS D 178 N PHE D 155 SHEET 9 DA12 SER D 201 GLU D 203 1 O SER D 201 N LEU D 179 SHEET 10 DA12 GLN D 225 ASN D 227 1 O GLN D 225 N ILE D 202 SHEET 11 DA12 LYS D 249 TRP D 251 1 O LYS D 249 N LEU D 226 SHEET 12 DA12 GLU D 278 GLN D 279 1 N GLN D 279 O ILE D 250 SHEET 1 DB 2 GLY D 97 GLU D 98 0 SHEET 2 DB 2 ILE D 124 VAL D 125 1 N VAL D 125 O GLY D 97
SSBOND 1 CYS A 34 CYS A 45 1555 1555 2.04 SSBOND 2 CYS A 43 CYS A 56 1555 1555 2.04 SSBOND 3 CYS A 79 CYS A 107 1555 1555 2.04 SSBOND 4 CYS A 259 CYS A 284 1555 1555 2.03 SSBOND 5 CYS A 261 CYS A 296 1555 1555 2.04 SSBOND 6 CYS B 34 CYS B 45 1555 1555 2.04 SSBOND 7 CYS B 43 CYS B 56 1555 1555 2.04 SSBOND 8 CYS B 79 CYS B 107 1555 1555 2.04 SSBOND 9 CYS B 259 CYS B 284 1555 1555 2.03 SSBOND 10 CYS B 261 CYS B 296 1555 1555 2.04 SSBOND 11 CYS C 34 CYS C 45 1555 1555 2.04 SSBOND 12 CYS C 43 CYS C 56 1555 1555 2.04 SSBOND 13 CYS C 79 CYS C 107 1555 1555 2.04 SSBOND 14 CYS C 259 CYS C 284 1555 1555 2.03 SSBOND 15 CYS C 261 CYS C 296 1555 1555 2.04 SSBOND 16 CYS D 34 CYS D 45 1555 1555 2.04 SSBOND 17 CYS D 43 CYS D 56 1555 1555 2.04 SSBOND 18 CYS D 79 CYS D 107 1555 1555 2.04 SSBOND 19 CYS D 259 CYS D 284 1555 1555 2.03 SSBOND 20 CYS D 261 CYS D 296 1555 1555 2.04
LINK ND2 ASN A 80 C1 NAG A 401 1555 1555 1.43 LINK ND2 ASN A 140 C1 NAG A 501 1555 1555 1.43 LINK O6 NAG A 501 C1 FUC A 502 1555 1555 1.40 LINK ND2 ASN B 80 C1 NAG B 401 1555 1555 1.44 LINK ND2 ASN B 175 C1 NAG B 601 1555 1555 1.44 LINK ND2 ASN C 80 C1 NAG C 401 1555 1555 1.43 LINK ND2 ASN C 140 C1 NAG C 501 1555 1555 1.43 LINK O4 NAG C 401 C1 NAG C 402 1555 1555 1.43 LINK O3 NAG C 501 C1 FUC C 505 1555 1555 1.43 LINK O6 NAG C 501 C1 FUC C 504 1555 1555 1.40 LINK O4 NAG C 501 C1 NAG C 502 1555 1555 1.42 LINK O4 NAG C 502 C1 BMA C 503 1555 1555 1.41 LINK O6 BMA C 503 C1 BMA C 507 1555 1555 1.41 LINK O3 BMA C 503 C1 MAN C 506 1555 1555 1.44 LINK ND2 ASN D 80 C1 NAG D 401 1555 1555 1.43 LINK O4 NAG D 401 C1 NAG D 402 1555 1555 1.43
CISPEP 1 CYS A 56 PRO A 57 0 -3.33 CISPEP 2 CYS A 261 PRO A 262 0 5.95 CISPEP 3 CYS B 56 PRO B 57 0 -2.59 CISPEP 4 CYS B 261 PRO B 262 0 7.35 CISPEP 5 CYS C 56 PRO C 57 0 -2.05 CISPEP 6 CYS C 261 PRO C 262 0 4.10 CISPEP 7 CYS D 56 PRO D 57 0 -2.41 CISPEP 8 ARG D 214 GLY D 215 0 -1.84 CISPEP 9 CYS D 261 PRO D 262 0 5.92
SITE 1 AC1 14 GLN A 211 SER A 235 VAL A 236 PRO A 237 SITE 2 AC1 14 HOH A2059 HOH A2061 HOH A2075 HOH A2092 SITE 3 AC1 14 HOH A2106 HOH A2107 GLN B 211 SER B 235 SITE 4 AC1 14 VAL B 236 PRO B 237 SITE 1 AC2 3 MET B 139 ASN B 140 LEU B 162 SITE 1 AC3 6 CYS B 284 GLY B 286 SER B 287 HOH B2089 SITE 2 AC3 6 ASN C 184 LYS C 208 SITE 1 AC4 3 LYS D 153 ASN D 175 HOH D2032 SITE 1 AC5 2 ASN A 62 ASN A 80 SITE 1 AC6 3 ASN A 140 HIS A 164 HOH A2105 SITE 1 AC7 2 ASN B 62 ASN B 80 SITE 1 AC8 4 HIS B 150 GLY B 151 ASN B 175 HOH B2032 SITE 1 AC9 2 ASN C 62 ASN C 80 SITE 1 BC1 16 LYS B 283 GLY B 288 LYS B 289 HOH B2085 SITE 2 BC1 16 MET C 139 ASN C 140 LEU C 162 HIS C 164 SITE 3 BC1 16 PHE C 241 ASP C 242 ARG C 243 LEU C 244 SITE 4 BC1 16 THR C 245 LYS C 273 ASN C 274 LYS C 277 SITE 1 BC2 2 ASN D 62 ASN D 80
CRYST1 88.787 93.276 225.342 90.00 90.00 90.00 P 21 21 21 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011263 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010721 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004438 0.00000