10 20 30 40 50 60 70 80 3ZW8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 28-JUL-11 3ZW8
TITLE CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TITLE 2 TYPE 1 (RPMFE1) IN APO FORM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOMAL BIFUNCTIONAL ENZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MULTIFUNCTIONAL ENZYME TYPE-1,PBE, PBFE, ENOYL-COA COMPND 5 HYDRATASE/3,2-TRANS-ENOYL-COA ISOMERASE, 3-HYDROXYACYL-COA COMPND 6 DEHYDROGENASE; COMPND 7 EC: 4.2.1.17, 5.3.3.8, 1.1.1.35; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 ORGAN: PEROXISOME; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET15B
KEYWDS BETA OXIDATION PATHWAY, OXIDOREDUCTASE, LIPID METABOLISM, LYASE, KEYWDS 2 ISOMERASE, PEROXISOME, FATTY ACID METABOLISM
EXPDTA X-RAY DIFFRACTION
AUTHOR P.KASARAGOD,W.SCHMITZ,J.K.HILTUNEN,R.K.WIERENGA
REVDAT 3 03-JUL-13 3ZW8 1 JRNL REVDAT 2 06-FEB-13 3ZW8 1 JRNL REVDAT 1 08-AUG-12 3ZW8 0
JRNL AUTH P.KASARAGOD,W.SCHMITZ,J.KALERVO HILTUNEN,R.K.WIERENGA JRNL TITL THE ISOMERASE AND HYDRATASE REACTION MECHANISM OF THE JRNL TITL 2 CROTONASE ACTIVE SITE OF THE MULTIFUNCTIONAL ENZYME (TYPE- JRNL TITL 3 1), AS DEDUCED FROM STRUCTURES OF COMPLEXES WITH JRNL TITL 4 3S-HYDROXY- ACYL-COA. JRNL REF FEBS J. V. 280 3160 2013 JRNL REFN ISSN 1742-464X JRNL PMID 23351063 JRNL DOI 10.1111/FEBS.12150
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.KASARAGOD,R.VENKATESAN,T.R.KIEMA,J.K.HILTUNEN,R.K.WIERENGA REMARK 1 TITL CRYSTAL STRUCTURE OF LIGANDED RAT PEROXISOMAL REMARK 1 TITL 2 MULTIFUNCTIONAL ENZYME TYPE 1: A FLEXIBLE MOLECULE WITH TWO REMARK 1 TITL 3 INTERCONNECTED ACTIVE SITES. REMARK 1 REF J.BIOL.CHEM. V. 285 24089 2010 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 20463028 REMARK 1 DOI 10.1074/JBC.M110.117606
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 100.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 86.18 REMARK 3 NUMBER OF REFLECTIONS : 53526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.23240 REMARK 3 R VALUE (WORKING SET) : 0.23004 REMARK 3 FREE R VALUE : 0.27673 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 2874 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.500 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.565 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3234 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.282 REMARK 3 BIN FREE R VALUE SET COUNT : 194 REMARK 3 BIN FREE R VALUE : 0.350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11092 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 245 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.962 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.25 REMARK 3 B22 (A**2) : -2.62 REMARK 3 B33 (A**2) : 2.87 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.736 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.341 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.238 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.666 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.895 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.861 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11384 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15425 ; 1.621 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1443 ; 5.977 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 452 ;36.658 ;23.274 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1938 ;19.013 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 79 ;17.982 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1705 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8545 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7194 ; 0.865 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11582 ; 1.807 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4190 ; 3.294 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3843 ; 6.142 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 5 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 61 2 REMARK 3 1 B 1 B 61 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 244 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 244 ; 0.06 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 204 ; 0.08 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 204 ; 0.08 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 244 ; 0.31 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 244 ; 0.31 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 204 ; 0.34 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 204 ; 0.34 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 75 A 258 2 REMARK 3 1 B 75 B 258 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 736 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 736 ; 0.07 ; 0.05 REMARK 3 MEDIUM POSITIONAL 2 A (A): 665 ; 0.10 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 B (A): 665 ; 0.10 ; 0.50 REMARK 3 TIGHT THERMAL 2 A (A**2): 736 ; 0.33 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 736 ; 0.33 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 665 ; 0.29 ; 2.00 REMARK 3 MEDIUM THERMAL 2 B (A**2): 665 ; 0.29 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 288 A 350 2 REMARK 3 1 B 288 B 350 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 252 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 B (A): 252 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 3 A (A): 203 ; 0.06 ; 0.50 REMARK 3 MEDIUM POSITIONAL 3 B (A): 203 ; 0.06 ; 0.50 REMARK 3 TIGHT THERMAL 3 A (A**2): 252 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 3 B (A**2): 252 ; 0.15 ; 0.50 REMARK 3 MEDIUM THERMAL 3 A (A**2): 203 ; 0.13 ; 2.00 REMARK 3 MEDIUM THERMAL 3 B (A**2): 203 ; 0.13 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 361 A 473 2 REMARK 3 1 B 361 B 473 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 4 A (A): 452 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 4 B (A): 452 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 4 A (A): 402 ; 0.07 ; 0.50 REMARK 3 MEDIUM POSITIONAL 4 B (A): 402 ; 0.07 ; 0.50 REMARK 3 TIGHT THERMAL 4 A (A**2): 452 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 4 B (A**2): 452 ; 0.15 ; 0.50 REMARK 3 MEDIUM THERMAL 4 A (A**2): 402 ; 0.15 ; 2.00 REMARK 3 MEDIUM THERMAL 4 B (A**2): 402 ; 0.15 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 477 A 718 2 REMARK 3 1 B 477 B 718 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 5 A (A): 968 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 5 B (A): 968 ; 0.07 ; 0.05 REMARK 3 MEDIUM POSITIONAL 5 A (A): 974 ; 0.09 ; 0.50 REMARK 3 MEDIUM POSITIONAL 5 B (A): 974 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 5 A (A**2): 968 ; 0.24 ; 0.50 REMARK 3 TIGHT THERMAL 5 B (A**2): 968 ; 0.24 ; 0.50 REMARK 3 MEDIUM THERMAL 5 A (A**2): 974 ; 0.23 ; 2.00 REMARK 3 MEDIUM THERMAL 5 B (A**2): 974 ; 0.23 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS.
REMARK 4 REMARK 4 3ZW8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-11. REMARK 100 THE PDBE ID CODE IS EBI-49174.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 210) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56678 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.50 REMARK 200 RESOLUTION RANGE LOW (A) : 44.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.8 REMARK 200 DATA REDUNDANCY : 5.5 REMARK 200 R MERGE (I) : 0.13 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.9 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.9 REMARK 200 R MERGE FOR SHELL (I) : 0.22 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.4 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 2X58 REMARK 200 REMARK 200 REMARK: NONE
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.3 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.8 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES PH 6.0, 150MM REMARK 280 AMMONIUM SULPHATE, 15% W/V PEG4000
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.61000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.21500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.84000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 113.21500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.61000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.84000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 LYS A 721 REMARK 465 LEU A 722 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 GLY B 719 REMARK 465 SER B 720 REMARK 465 LYS B 721 REMARK 465 LEU B 722
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 234 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 234 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 234 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 234 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 PRO B 672 C - N - CA ANGL. DEV. = -9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A -1 -56.64 47.20 REMARK 500 HIS A 9 32.91 71.85 REMARK 500 PHE A 57 -71.81 -69.24 REMARK 500 CYS A 58 129.28 -171.45 REMARK 500 THR A 70 -73.06 -119.59 REMARK 500 LEU A 73 -43.33 79.30 REMARK 500 ILE A 128 -158.79 -123.13 REMARK 500 ALA A 132 52.36 -112.02 REMARK 500 ARG A 133 -6.23 83.88 REMARK 500 LEU A 304 55.62 -119.42 REMARK 500 HIS A 351 34.98 -80.26 REMARK 500 PRO A 360 98.91 -69.55 REMARK 500 ASP A 384 113.94 -176.06 REMARK 500 SER A 420 23.89 -78.16 REMARK 500 ARG A 423 59.77 -140.56 REMARK 500 ASN A 474 45.12 -100.28 REMARK 500 PHE A 478 -120.11 52.46 REMARK 500 GLN A 536 -9.72 -51.05 REMARK 500 THR A 539 -8.44 -152.17 REMARK 500 ASN A 554 22.05 -78.46 REMARK 500 HIS A 658 0.34 -66.88 REMARK 500 ILE A 688 79.89 -114.79 REMARK 500 ALA A 715 -11.20 -145.29 REMARK 500 HIS B 9 31.98 76.11 REMARK 500 PHE B 57 -76.76 -72.98 REMARK 500 ALA B 74 51.95 -91.92 REMARK 500 ILE B 128 -156.20 -114.05 REMARK 500 ARG B 133 -9.25 89.29 REMARK 500 LEU B 304 52.39 -114.37 REMARK 500 LYS B 361 75.18 -110.97 REMARK 500 ASP B 384 116.59 -170.66 REMARK 500 ASN B 474 50.78 -97.84 REMARK 500 PHE B 478 -115.34 40.14 REMARK 500 GLN B 536 0.70 -61.65 REMARK 500 THR B 539 -5.42 -157.33 REMARK 500 ASN B 554 31.97 -83.95 REMARK 500 GLU B 609 107.18 -52.44 REMARK 500 HIS B 658 0.84 -64.00 REMARK 500 ILE B 688 78.36 -116.28 REMARK 500 ALA B 715 -12.87 -143.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 THR A 70 24.7 L L OUTSIDE RANGE REMARK 500 VAL A 226 24.2 L L OUTSIDE RANGE REMARK 500 TYR A 649 24.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1721 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1722 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1719 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1720 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1723 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B3001
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZWB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL REMARK 900 ENZYME TYPE 1 (RPMFE1) COMPLEXED WITH 2TRANS-HEXENOYL- REMARK 900 COA REMARK 900 RELATED ID: 3ZWA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL REMARK 900 ENZYME TYPE 1 (RPMFE1) COMPLEXED WITH 3S-HYDROXY- REMARK 900 HEXANOYL-COA REMARK 900 RELATED ID: 2X58 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF MFE1 LIGANDED WITH COA REMARK 900 RELATED ID: 3ZWC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL REMARK 900 ENZYME TYPE 1 (RPMFE1) COMPLEXED WITH 3S-HYDROXY- REMARK 900 DECANOYL-COA REMARK 900 RELATED ID: 1ZCJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF 3-HYDROXYACYL-COA DEHYDROGENASE
DBREF 3ZW8 A 1 722 UNP P07896 ECHP_RAT 1 722 DBREF 3ZW8 B 1 722 UNP P07896 ECHP_RAT 1 722
SEQADV 3ZW8 MET A -19 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 GLY A -18 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER A -17 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER A -16 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS A -15 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS A -14 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS A -13 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS A -12 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS A -11 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS A -10 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER A -9 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER A -8 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 GLY A -7 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 LEU A -6 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 VAL A -5 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 PRO A -4 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 ARG A -3 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 GLY A -2 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER A -1 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS A 0 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 MET B -19 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 GLY B -18 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER B -17 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER B -16 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS B -15 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS B -14 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS B -13 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS B -12 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS B -11 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS B -10 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER B -9 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER B -8 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 GLY B -7 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 LEU B -6 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 VAL B -5 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 PRO B -4 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 ARG B -3 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 GLY B -2 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 SER B -1 UNP P07896 EXPRESSION TAG SEQADV 3ZW8 HIS B 0 UNP P07896 EXPRESSION TAG
SEQRES 1 A 742 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 742 LEU VAL PRO ARG GLY SER HIS MET ALA GLU TYR LEU ARG SEQRES 3 A 742 LEU PRO HIS SER LEU ALA MET ILE ARG LEU CYS ASN PRO SEQRES 4 A 742 PRO VAL ASN ALA VAL SER PRO THR VAL ILE ARG GLU VAL SEQRES 5 A 742 ARG ASN GLY LEU GLN LYS ALA GLY SER ASP HIS THR VAL SEQRES 6 A 742 LYS ALA ILE VAL ILE CYS GLY ALA ASN GLY ASN PHE CYS SEQRES 7 A 742 ALA GLY ALA ASP ILE HIS GLY PHE SER ALA PHE THR PRO SEQRES 8 A 742 GLY LEU ALA LEU GLY SER LEU VAL ASP GLU ILE GLN ARG SEQRES 9 A 742 TYR GLN LYS PRO VAL LEU ALA ALA ILE GLN GLY VAL ALA SEQRES 10 A 742 LEU GLY GLY GLY LEU GLU LEU ALA LEU GLY CYS HIS TYR SEQRES 11 A 742 ARG ILE ALA ASN ALA LYS ALA ARG VAL GLY LEU PRO GLU SEQRES 12 A 742 VAL THR LEU GLY ILE LEU PRO GLY ALA ARG GLY THR GLN SEQRES 13 A 742 LEU LEU PRO ARG VAL VAL GLY VAL PRO VAL ALA LEU ASP SEQRES 14 A 742 LEU ILE THR SER GLY LYS TYR LEU SER ALA ASP GLU ALA SEQRES 15 A 742 LEU ARG LEU GLY ILE LEU ASP ALA VAL VAL LYS SER ASP SEQRES 16 A 742 PRO VAL GLU GLU ALA ILE LYS PHE ALA GLN LYS ILE ILE SEQRES 17 A 742 ASP LYS PRO ILE GLU PRO ARG ARG ILE PHE ASN LYS PRO SEQRES 18 A 742 VAL PRO SER LEU PRO ASN MET ASP SER VAL PHE ALA GLU SEQRES 19 A 742 ALA ILE ALA LYS VAL ARG LYS GLN TYR PRO GLY VAL LEU SEQRES 20 A 742 ALA PRO GLU THR CYS VAL ARG SER ILE GLN ALA SER VAL SEQRES 21 A 742 LYS HIS PRO TYR GLU VAL GLY ILE LYS GLU GLU GLU LYS SEQRES 22 A 742 LEU PHE MET TYR LEU ARG ALA SER GLY GLN ALA LYS ALA SEQRES 23 A 742 LEU GLN TYR ALA PHE PHE ALA GLU LYS SER ALA ASN LYS SEQRES 24 A 742 TRP SER THR PRO SER GLY ALA SER TRP LYS THR ALA SER SEQRES 25 A 742 ALA GLN PRO VAL SER SER VAL GLY VAL LEU GLY LEU GLY SEQRES 26 A 742 THR MET GLY ARG GLY ILE ALA ILE SER PHE ALA ARG VAL SEQRES 27 A 742 GLY ILE SER VAL VAL ALA VAL GLU SER ASP PRO LYS GLN SEQRES 28 A 742 LEU ASP ALA ALA LYS LYS ILE ILE THR PHE THR LEU GLU SEQRES 29 A 742 LYS GLU ALA SER ARG ALA HIS GLN ASN GLY GLN ALA SER SEQRES 30 A 742 ALA LYS PRO LYS LEU ARG PHE SER SER SER THR LYS GLU SEQRES 31 A 742 LEU SER THR VAL ASP LEU VAL VAL GLU ALA VAL PHE GLU SEQRES 32 A 742 ASP MET ASN LEU LYS LYS LYS VAL PHE ALA GLU LEU SER SEQRES 33 A 742 ALA LEU CYS LYS PRO GLY ALA PHE LEU CYS THR ASN THR SEQRES 34 A 742 SER ALA LEU ASN VAL ASP ASP ILE ALA SER SER THR ASP SEQRES 35 A 742 ARG PRO GLN LEU VAL ILE GLY THR HIS PHE PHE SER PRO SEQRES 36 A 742 ALA HIS VAL MET ARG LEU LEU GLU VAL ILE PRO SER ARG SEQRES 37 A 742 TYR SER SER PRO THR THR ILE ALA THR VAL MET SER LEU SEQRES 38 A 742 SER LYS LYS ILE GLY LYS ILE GLY VAL VAL VAL GLY ASN SEQRES 39 A 742 CYS TYR GLY PHE VAL GLY ASN ARG MET LEU ALA PRO TYR SEQRES 40 A 742 TYR ASN GLN GLY PHE PHE LEU LEU GLU GLU GLY SER LYS SEQRES 41 A 742 PRO GLU ASP VAL ASP GLY VAL LEU GLU GLU PHE GLY PHE SEQRES 42 A 742 LYS MET GLY PRO PHE ARG VAL SER ASP LEU ALA GLY LEU SEQRES 43 A 742 ASP VAL GLY TRP LYS ILE ARG LYS GLY GLN GLY LEU THR SEQRES 44 A 742 GLY PRO SER LEU PRO PRO GLY THR PRO VAL ARG LYS ARG SEQRES 45 A 742 GLY ASN SER ARG TYR SER PRO LEU GLY ASP MET LEU CYS SEQRES 46 A 742 GLU ALA GLY ARG PHE GLY GLN LYS THR GLY LYS GLY TRP SEQRES 47 A 742 TYR GLN TYR ASP LYS PRO LEU GLY ARG ILE HIS LYS PRO SEQRES 48 A 742 ASP PRO TRP LEU SER THR PHE LEU SER GLN TYR ARG GLU SEQRES 49 A 742 VAL HIS HIS ILE GLU GLN ARG THR ILE SER LYS GLU GLU SEQRES 50 A 742 ILE LEU GLU ARG CYS LEU TYR SER LEU ILE ASN GLU ALA SEQRES 51 A 742 PHE ARG ILE LEU GLU GLU GLY MET ALA ALA ARG PRO GLU SEQRES 52 A 742 HIS ILE ASP VAL ILE TYR LEU HIS GLY TYR GLY TRP PRO SEQRES 53 A 742 ARG HIS LYS GLY GLY PRO MET PHE TYR ALA ALA SER VAL SEQRES 54 A 742 GLY LEU PRO THR VAL LEU GLU LYS LEU GLN LYS TYR TYR SEQRES 55 A 742 ARG GLN ASN PRO ASP ILE PRO GLN LEU GLU PRO SER ASP SEQRES 56 A 742 TYR LEU ARG ARG LEU VAL ALA GLN GLY SER PRO PRO LEU SEQRES 57 A 742 LYS GLU TRP GLN SER LEU ALA GLY PRO HIS GLY SER LYS SEQRES 58 A 742 LEU SEQRES 1 B 742 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 742 LEU VAL PRO ARG GLY SER HIS MET ALA GLU TYR LEU ARG SEQRES 3 B 742 LEU PRO HIS SER LEU ALA MET ILE ARG LEU CYS ASN PRO SEQRES 4 B 742 PRO VAL ASN ALA VAL SER PRO THR VAL ILE ARG GLU VAL SEQRES 5 B 742 ARG ASN GLY LEU GLN LYS ALA GLY SER ASP HIS THR VAL SEQRES 6 B 742 LYS ALA ILE VAL ILE CYS GLY ALA ASN GLY ASN PHE CYS SEQRES 7 B 742 ALA GLY ALA ASP ILE HIS GLY PHE SER ALA PHE THR PRO SEQRES 8 B 742 GLY LEU ALA LEU GLY SER LEU VAL ASP GLU ILE GLN ARG SEQRES 9 B 742 TYR GLN LYS PRO VAL LEU ALA ALA ILE GLN GLY VAL ALA SEQRES 10 B 742 LEU GLY GLY GLY LEU GLU LEU ALA LEU GLY CYS HIS TYR SEQRES 11 B 742 ARG ILE ALA ASN ALA LYS ALA ARG VAL GLY LEU PRO GLU SEQRES 12 B 742 VAL THR LEU GLY ILE LEU PRO GLY ALA ARG GLY THR GLN SEQRES 13 B 742 LEU LEU PRO ARG VAL VAL GLY VAL PRO VAL ALA LEU ASP SEQRES 14 B 742 LEU ILE THR SER GLY LYS TYR LEU SER ALA ASP GLU ALA SEQRES 15 B 742 LEU ARG LEU GLY ILE LEU ASP ALA VAL VAL LYS SER ASP SEQRES 16 B 742 PRO VAL GLU GLU ALA ILE LYS PHE ALA GLN LYS ILE ILE SEQRES 17 B 742 ASP LYS PRO ILE GLU PRO ARG ARG ILE PHE ASN LYS PRO SEQRES 18 B 742 VAL PRO SER LEU PRO ASN MET ASP SER VAL PHE ALA GLU SEQRES 19 B 742 ALA ILE ALA LYS VAL ARG LYS GLN TYR PRO GLY VAL LEU SEQRES 20 B 742 ALA PRO GLU THR CYS VAL ARG SER ILE GLN ALA SER VAL SEQRES 21 B 742 LYS HIS PRO TYR GLU VAL GLY ILE LYS GLU GLU GLU LYS SEQRES 22 B 742 LEU PHE MET TYR LEU ARG ALA SER GLY GLN ALA LYS ALA SEQRES 23 B 742 LEU GLN TYR ALA PHE PHE ALA GLU LYS SER ALA ASN LYS SEQRES 24 B 742 TRP SER THR PRO SER GLY ALA SER TRP LYS THR ALA SER SEQRES 25 B 742 ALA GLN PRO VAL SER SER VAL GLY VAL LEU GLY LEU GLY SEQRES 26 B 742 THR MET GLY ARG GLY ILE ALA ILE SER PHE ALA ARG VAL SEQRES 27 B 742 GLY ILE SER VAL VAL ALA VAL GLU SER ASP PRO LYS GLN SEQRES 28 B 742 LEU ASP ALA ALA LYS LYS ILE ILE THR PHE THR LEU GLU SEQRES 29 B 742 LYS GLU ALA SER ARG ALA HIS GLN ASN GLY GLN ALA SER SEQRES 30 B 742 ALA LYS PRO LYS LEU ARG PHE SER SER SER THR LYS GLU SEQRES 31 B 742 LEU SER THR VAL ASP LEU VAL VAL GLU ALA VAL PHE GLU SEQRES 32 B 742 ASP MET ASN LEU LYS LYS LYS VAL PHE ALA GLU LEU SER SEQRES 33 B 742 ALA LEU CYS LYS PRO GLY ALA PHE LEU CYS THR ASN THR SEQRES 34 B 742 SER ALA LEU ASN VAL ASP ASP ILE ALA SER SER THR ASP SEQRES 35 B 742 ARG PRO GLN LEU VAL ILE GLY THR HIS PHE PHE SER PRO SEQRES 36 B 742 ALA HIS VAL MET ARG LEU LEU GLU VAL ILE PRO SER ARG SEQRES 37 B 742 TYR SER SER PRO THR THR ILE ALA THR VAL MET SER LEU SEQRES 38 B 742 SER LYS LYS ILE GLY LYS ILE GLY VAL VAL VAL GLY ASN SEQRES 39 B 742 CYS TYR GLY PHE VAL GLY ASN ARG MET LEU ALA PRO TYR SEQRES 40 B 742 TYR ASN GLN GLY PHE PHE LEU LEU GLU GLU GLY SER LYS SEQRES 41 B 742 PRO GLU ASP VAL ASP GLY VAL LEU GLU GLU PHE GLY PHE SEQRES 42 B 742 LYS MET GLY PRO PHE ARG VAL SER ASP LEU ALA GLY LEU SEQRES 43 B 742 ASP VAL GLY TRP LYS ILE ARG LYS GLY GLN GLY LEU THR SEQRES 44 B 742 GLY PRO SER LEU PRO PRO GLY THR PRO VAL ARG LYS ARG SEQRES 45 B 742 GLY ASN SER ARG TYR SER PRO LEU GLY ASP MET LEU CYS SEQRES 46 B 742 GLU ALA GLY ARG PHE GLY GLN LYS THR GLY LYS GLY TRP SEQRES 47 B 742 TYR GLN TYR ASP LYS PRO LEU GLY ARG ILE HIS LYS PRO SEQRES 48 B 742 ASP PRO TRP LEU SER THR PHE LEU SER GLN TYR ARG GLU SEQRES 49 B 742 VAL HIS HIS ILE GLU GLN ARG THR ILE SER LYS GLU GLU SEQRES 50 B 742 ILE LEU GLU ARG CYS LEU TYR SER LEU ILE ASN GLU ALA SEQRES 51 B 742 PHE ARG ILE LEU GLU GLU GLY MET ALA ALA ARG PRO GLU SEQRES 52 B 742 HIS ILE ASP VAL ILE TYR LEU HIS GLY TYR GLY TRP PRO SEQRES 53 B 742 ARG HIS LYS GLY GLY PRO MET PHE TYR ALA ALA SER VAL SEQRES 54 B 742 GLY LEU PRO THR VAL LEU GLU LYS LEU GLN LYS TYR TYR SEQRES 55 B 742 ARG GLN ASN PRO ASP ILE PRO GLN LEU GLU PRO SER ASP SEQRES 56 B 742 TYR LEU ARG ARG LEU VAL ALA GLN GLY SER PRO PRO LEU SEQRES 57 B 742 LYS GLU TRP GLN SER LEU ALA GLY PRO HIS GLY SER LYS SEQRES 58 B 742 LEU
HET GOL A1721 6 HET SO4 A1722 5 HET SO4 A1723 5 HET SO4 A3001 5 HET SO4 B1719 5 HET SO4 B1720 5 HET SO4 B3001 5
HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 3 GOL C3 H8 O3 FORMUL 4 SO4 6(O4 S 2-) FORMUL 5 HOH *245(H2 O)
HELIX 1 1 SER A 25 ASP A 42 1 18 HELIX 2 2 LEU A 73 ARG A 84 1 12 HELIX 3 3 GLY A 99 CYS A 108 1 10 HELIX 4 4 PRO A 122 GLY A 127 5 6 HELIX 5 5 ARG A 133 GLY A 143 1 11 HELIX 6 6 GLY A 143 GLY A 154 1 12 HELIX 7 7 ALA A 159 LEU A 165 1 7 HELIX 8 8 ASP A 175 LYS A 186 1 12 HELIX 9 9 ILE A 192 ARG A 196 5 5 HELIX 10 10 ARG A 196 LYS A 200 5 5 HELIX 11 11 ASN A 207 TYR A 223 1 17 HELIX 12 12 VAL A 226 HIS A 242 1 17 HELIX 13 13 PRO A 243 ALA A 260 1 18 HELIX 14 14 SER A 261 ASN A 278 1 18 HELIX 15 15 GLY A 305 ARG A 317 1 13 HELIX 16 16 ASP A 328 SER A 348 1 21 HELIX 17 17 SER A 367 SER A 372 5 6 HELIX 18 18 ASP A 384 CYS A 399 1 16 HELIX 19 19 ASN A 413 SER A 420 1 8 HELIX 20 20 ARG A 423 GLN A 425 5 3 HELIX 21 21 SER A 451 ILE A 465 1 15 HELIX 22 22 VAL A 479 GLY A 498 1 20 HELIX 23 23 LYS A 500 GLY A 512 1 13 HELIX 24 24 GLY A 516 GLY A 525 1 10 HELIX 25 25 GLY A 525 GLN A 536 1 12 HELIX 26 26 PRO A 559 GLU A 566 1 8 HELIX 27 27 GLN A 572 GLY A 575 5 4 HELIX 28 28 ASP A 592 HIS A 607 1 16 HELIX 29 29 SER A 614 GLU A 636 1 23 HELIX 30 30 ARG A 641 TYR A 653 1 13 HELIX 31 31 PRO A 656 GLY A 660 5 5 HELIX 32 32 GLY A 661 GLY A 670 1 10 HELIX 33 33 GLY A 670 GLN A 684 1 15 HELIX 34 34 ILE A 688 GLU A 692 5 5 HELIX 35 35 SER A 694 GLN A 703 1 10 HELIX 36 36 PRO A 707 LYS A 709 5 3 HELIX 37 37 GLU A 710 GLY A 716 1 7 HELIX 38 38 SER B 25 ASP B 42 1 18 HELIX 39 39 ALA B 74 ARG B 84 1 11 HELIX 40 40 GLY B 99 GLY B 107 1 9 HELIX 41 41 PRO B 122 GLY B 127 5 6 HELIX 42 42 ARG B 133 GLY B 143 1 11 HELIX 43 43 GLY B 143 GLY B 154 1 12 HELIX 44 44 ALA B 159 GLY B 166 1 8 HELIX 45 45 ASP B 175 LYS B 186 1 12 HELIX 46 46 ILE B 192 ARG B 196 5 5 HELIX 47 47 ARG B 196 LYS B 200 5 5 HELIX 48 48 ASN B 207 TYR B 223 1 17 HELIX 49 49 VAL B 226 HIS B 242 1 17 HELIX 50 50 PRO B 243 ALA B 260 1 18 HELIX 51 51 SER B 261 ASN B 278 1 18 HELIX 52 52 GLY B 305 VAL B 318 1 14 HELIX 53 53 ASP B 328 SER B 348 1 21 HELIX 54 54 SER B 367 SER B 372 5 6 HELIX 55 55 ASP B 384 CYS B 399 1 16 HELIX 56 56 ASN B 413 SER B 420 1 8 HELIX 57 57 ARG B 423 GLN B 425 5 3 HELIX 58 58 SER B 451 ILE B 465 1 15 HELIX 59 59 VAL B 479 GLY B 498 1 20 HELIX 60 60 LYS B 500 GLY B 512 1 13 HELIX 61 61 GLY B 516 GLY B 525 1 10 HELIX 62 62 GLY B 525 GLN B 536 1 12 HELIX 63 63 PRO B 559 ALA B 567 1 9 HELIX 64 64 GLY B 571 GLY B 575 5 5 HELIX 65 65 ASP B 592 HIS B 607 1 16 HELIX 66 66 SER B 614 GLU B 636 1 23 HELIX 67 67 ARG B 641 TYR B 653 1 13 HELIX 68 68 PRO B 656 GLY B 660 5 5 HELIX 69 69 GLY B 661 GLY B 670 1 10 HELIX 70 70 GLY B 670 GLN B 684 1 15 HELIX 71 71 ILE B 688 GLU B 692 5 5 HELIX 72 72 SER B 694 GLN B 703 1 10 HELIX 73 73 PRO B 707 LYS B 709 5 3 HELIX 74 74 GLU B 710 GLY B 716 1 7
SHEET 1 AA 6 ALA A 2 ARG A 6 0 SHEET 2 AA 6 LEU A 11 LEU A 16 -1 O MET A 13 N LEU A 5 SHEET 3 AA 6 ALA A 47 GLY A 52 1 O ALA A 47 N ALA A 12 SHEET 4 AA 6 VAL A 89 ILE A 93 1 O LEU A 90 N ILE A 50 SHEET 5 AA 6 TYR A 110 ASN A 114 1 O TYR A 110 N ALA A 91 SHEET 6 AA 6 ALA A 170 VAL A 172 1 O ALA A 170 N ALA A 113 SHEET 1 AB 3 VAL A 96 LEU A 98 0 SHEET 2 AB 3 ARG A 118 GLY A 120 1 O ARG A 118 N ALA A 97 SHEET 3 AB 3 TYR A 156 SER A 158 -1 O LEU A 157 N VAL A 119 SHEET 1 AC 8 LEU A 362 SER A 365 0 SHEET 2 AC 8 SER A 321 VAL A 325 1 O VAL A 322 N ARG A 363 SHEET 3 AC 8 SER A 298 LEU A 302 1 O VAL A 299 N VAL A 323 SHEET 4 AC 8 LEU A 376 GLU A 379 1 O LEU A 376 N GLY A 300 SHEET 5 AC 8 PHE A 404 THR A 407 1 O PHE A 404 N VAL A 377 SHEET 6 AC 8 VAL A 427 PHE A 432 1 O ILE A 428 N THR A 407 SHEET 7 AC 8 LEU A 441 PRO A 446 -1 O GLU A 443 N HIS A 431 SHEET 8 AC 8 ILE A 468 VAL A 471 1 O ILE A 468 N LEU A 442 SHEET 1 AD 2 LYS A 551 ARG A 552 0 SHEET 2 AD 2 SER A 555 ARG A 556 -1 O SER A 555 N ARG A 552 SHEET 1 AE 2 GLN A 580 TYR A 581 0 SHEET 2 AE 2 HIS A 589 LYS A 590 -1 O LYS A 590 N GLN A 580 SHEET 1 BA 6 ALA B 2 ARG B 6 0 SHEET 2 BA 6 LEU B 11 LEU B 16 -1 O MET B 13 N LEU B 5 SHEET 3 BA 6 ALA B 47 GLY B 52 1 O ALA B 47 N ALA B 12 SHEET 4 BA 6 VAL B 89 ILE B 93 1 O LEU B 90 N ILE B 50 SHEET 5 BA 6 TYR B 110 ASN B 114 1 O TYR B 110 N ALA B 91 SHEET 6 BA 6 ALA B 170 VAL B 172 1 O ALA B 170 N ALA B 113 SHEET 1 BB 3 VAL B 96 LEU B 98 0 SHEET 2 BB 3 ARG B 118 GLY B 120 1 O ARG B 118 N ALA B 97 SHEET 3 BB 3 TYR B 156 SER B 158 -1 O LEU B 157 N VAL B 119 SHEET 1 BC 8 LYS B 361 SER B 365 0 SHEET 2 BC 8 SER B 321 VAL B 325 1 O VAL B 322 N ARG B 363 SHEET 3 BC 8 SER B 298 LEU B 302 1 O VAL B 299 N VAL B 323 SHEET 4 BC 8 LEU B 376 GLU B 379 1 O LEU B 376 N GLY B 300 SHEET 5 BC 8 PHE B 404 THR B 407 1 O PHE B 404 N VAL B 377 SHEET 6 BC 8 VAL B 427 PHE B 432 1 O ILE B 428 N THR B 407 SHEET 7 BC 8 LEU B 441 PRO B 446 -1 O GLU B 443 N HIS B 431 SHEET 8 BC 8 ILE B 468 VAL B 471 1 O ILE B 468 N LEU B 442 SHEET 1 BD 2 LYS B 551 ARG B 552 0 SHEET 2 BD 2 SER B 555 ARG B 556 -1 O SER B 555 N ARG B 552 SHEET 1 BE 2 GLN B 580 TYR B 581 0 SHEET 2 BE 2 HIS B 589 LYS B 590 -1 O LYS B 590 N GLN B 580
CISPEP 1 PRO A 19 PRO A 20 0 7.36 CISPEP 2 SER A 434 PRO A 435 0 0.02 CISPEP 3 PRO B 19 PRO B 20 0 8.60 CISPEP 4 SER B 434 PRO B 435 0 -3.77
SITE 1 AC1 8 GLY A 72 GLU A 103 GLU A 123 PRO A 130 SITE 2 AC1 8 GLY A 131 ALA A 132 PHE A 255 SO4 A1722 SITE 1 AC2 9 GLY A 60 ALA A 61 PHE A 66 GLY A 99 SITE 2 AC2 9 GLY A 100 PRO A 122 GLU A 123 GOL A1721 SITE 3 AC2 9 HOH A2148 SITE 1 AC3 4 PRO B 191 ILE B 192 GLU B 193 ARG B 196 SITE 1 AC4 6 GLY B 60 ALA B 61 PHE B 66 GLY B 99 SITE 2 AC4 6 GLY B 100 GLU B 123 SITE 1 AC5 4 TRP A 594 GLY B 305 THR B 306 ARG B 309 SITE 1 AC6 5 ASN A 207 ASP A 209 SER A 210 GLY A 553 SITE 2 AC6 5 ASN A 554 SITE 1 AC7 4 PRO A 191 ILE A 192 GLU A 193 ARG A 196 SITE 1 AC8 4 PRO B 191 ILE B 192 GLU B 193 ARG B 196
CRYST1 65.220 125.680 226.430 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015333 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007957 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004416 0.00000