10 20 30 40 50 60 70 80 3OQ4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CELL CYCLE 02-SEP-10 3OQ4
TITLE CRYSTAL STRUCTURE OF MOTIF N OF SACCHAROMYCES CEREVISIAE DBF4
COMPND MOL_ID: 1; COMPND 2 MOLECULE: DBF4; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: RESIDUES 120-250; COMPND 5 SYNONYM: PROTEIN DNA52; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST,LAGER BEER YEAST,YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: D4205, DBF4, DNA52, YD9609.07C, YDR052C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STARPRAREPLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS DDK, BRCT, RAD53, REPLICATION CHECKPOINT, FHA DOMAIN, REGULATORY KEYWDS 2 SUBUNIT OF DDK, CDC7, PHOSPHORYLATION, NUCLEAR, CELL CYCLE
EXPDTA X-RAY DIFFRACTION
AUTHOR L.A.MATTHEWS,D.R.JONES,A.A.PRASAD,B.P.DUNCKER,A.GUARNE
REVDAT 1 07-SEP-11 3OQ4 0
JRNL AUTH L.A.MATTHEWS,D.R.JONES,A.A.PRASAD,B.P.DUNCKER,A.GUARNE JRNL TITL CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE DBF4-MOTIF N JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.A.MATTHEWS,A.DUONG,A.A.PRASAD,B.P.DUNCKER,A.GUARNE REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION ANALYSIS REMARK 1 TITL 2 OF MOTIF N FROM SACCHAROMYCES CEREVISIAE DBF4 REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. F65 890 2009 REMARK 1 REFN ESSN 1744-3091
REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 42245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4170 - 5.1665 0.99 4192 263 0.2032 0.2157 REMARK 3 2 5.1665 - 4.1016 1.00 4091 205 0.1687 0.1931 REMARK 3 3 4.1016 - 3.5834 1.00 4031 203 0.1839 0.1914 REMARK 3 4 3.5834 - 3.2558 1.00 3997 213 0.2023 0.2298 REMARK 3 5 3.2558 - 3.0225 1.00 4006 205 0.2087 0.2525 REMARK 3 6 3.0225 - 2.8443 1.00 3958 216 0.2247 0.2320 REMARK 3 7 2.8443 - 2.7019 1.00 3947 232 0.2312 0.2740 REMARK 3 8 2.7019 - 2.5843 1.00 4015 191 0.2525 0.3165 REMARK 3 9 2.5843 - 2.4848 1.00 3908 220 0.2478 0.2778 REMARK 3 10 2.4848 - 2.3991 0.99 3954 198 0.2462 0.3272 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 40.38 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 17.89630 REMARK 3 B22 (A**2) : -1.54530 REMARK 3 B33 (A**2) : -16.35100 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4429 REMARK 3 ANGLE : 0.946 5953 REMARK 3 CHIRALITY : 0.065 683 REMARK 3 PLANARITY : 0.003 739 REMARK 3 DIHEDRAL : 13.973 1714 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3OQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-10. REMARK 100 THE RCSB ID CODE IS RCSB061432.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0809 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42318 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.19200 REMARK 200 R SYM (I) : 0.20600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.73700 REMARK 200 R SYM FOR SHELL (I) : 0.50200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3OQ0 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% MPD (V/V) AND 100 MM NA/K REMARK 280 PHOSPHATE BUFFER PH 7.1, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 41.85700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.85350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.85700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.85350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 117 REMARK 465 SER A 118 REMARK 465 LEU A 243 REMARK 465 TYR A 244 REMARK 465 GLY A 245 REMARK 465 PRO A 246 REMARK 465 THR A 247 REMARK 465 ASP A 248 REMARK 465 ARG A 249 REMARK 465 ASP A 250 REMARK 465 GLY B 117 REMARK 465 SER B 118 REMARK 465 HIS B 119 REMARK 465 MET B 120 REMARK 465 LYS B 121 REMARK 465 THR B 224 REMARK 465 LYS B 225 REMARK 465 SER B 226 REMARK 465 ALA B 227 REMARK 465 SER B 228 REMARK 465 LEU B 229 REMARK 465 ALA B 230 REMARK 465 ALA B 231 REMARK 465 PRO B 232 REMARK 465 THR B 233 REMARK 465 LEU B 234 REMARK 465 SER B 235 REMARK 465 ASN B 236 REMARK 465 LEU B 237 REMARK 465 LEU B 238 REMARK 465 HIS B 239 REMARK 465 ASN B 240 REMARK 465 GLU B 241 REMARK 465 LYS B 242 REMARK 465 LEU B 243 REMARK 465 TYR B 244 REMARK 465 GLY B 245 REMARK 465 PRO B 246 REMARK 465 THR B 247 REMARK 465 ASP B 248 REMARK 465 ARG B 249 REMARK 465 ASP B 250 REMARK 465 GLY C 117 REMARK 465 SER C 118 REMARK 465 HIS C 119 REMARK 465 MET C 120 REMARK 465 LYS C 121 REMARK 465 ARG C 122 REMARK 465 SER C 222 REMARK 465 LYS C 223 REMARK 465 THR C 224 REMARK 465 LYS C 225 REMARK 465 SER C 226 REMARK 465 ALA C 227 REMARK 465 SER C 228 REMARK 465 LEU C 229 REMARK 465 ALA C 230 REMARK 465 ALA C 231 REMARK 465 PRO C 232 REMARK 465 THR C 233 REMARK 465 LEU C 234 REMARK 465 SER C 235 REMARK 465 ASN C 236 REMARK 465 LEU C 237 REMARK 465 LEU C 238 REMARK 465 HIS C 239 REMARK 465 ASN C 240 REMARK 465 GLU C 241 REMARK 465 LYS C 242 REMARK 465 LEU C 243 REMARK 465 TYR C 244 REMARK 465 GLY C 245 REMARK 465 PRO C 246 REMARK 465 THR C 247 REMARK 465 ASP C 248 REMARK 465 ARG C 249 REMARK 465 ASP C 250 REMARK 465 GLY D 117 REMARK 465 SER D 118 REMARK 465 LEU D 218 REMARK 465 ASP D 219 REMARK 465 HIS D 220 REMARK 465 LEU D 221 REMARK 465 SER D 222 REMARK 465 LYS D 223 REMARK 465 THR D 224 REMARK 465 LYS D 225 REMARK 465 SER D 226 REMARK 465 ALA D 227 REMARK 465 SER D 228 REMARK 465 LEU D 229 REMARK 465 ALA D 230 REMARK 465 ALA D 231 REMARK 465 PRO D 232 REMARK 465 THR D 233 REMARK 465 LEU D 234 REMARK 465 SER D 235 REMARK 465 ASN D 236 REMARK 465 LEU D 237 REMARK 465 LEU D 238 REMARK 465 HIS D 239 REMARK 465 ASN D 240 REMARK 465 GLU D 241 REMARK 465 LYS D 242 REMARK 465 LEU D 243 REMARK 465 TYR D 244 REMARK 465 GLY D 245 REMARK 465 PRO D 246 REMARK 465 THR D 247 REMARK 465 ASP D 248 REMARK 465 ARG D 249 REMARK 465 ASP D 250 REMARK 465 GLY E 117 REMARK 465 SER E 118 REMARK 465 HIS E 119 REMARK 465 MET E 120 REMARK 465 ASP E 217 REMARK 465 LEU E 218 REMARK 465 ASP E 219 REMARK 465 HIS E 220 REMARK 465 LEU E 221 REMARK 465 SER E 222 REMARK 465 LYS E 223 REMARK 465 THR E 224 REMARK 465 LYS E 225 REMARK 465 SER E 226 REMARK 465 ALA E 227 REMARK 465 SER E 228 REMARK 465 LEU E 229 REMARK 465 ALA E 230 REMARK 465 ALA E 231 REMARK 465 PRO E 232 REMARK 465 THR E 233 REMARK 465 LEU E 234 REMARK 465 SER E 235 REMARK 465 ASN E 236 REMARK 465 LEU E 237 REMARK 465 LEU E 238 REMARK 465 HIS E 239 REMARK 465 ASN E 240 REMARK 465 GLU E 241 REMARK 465 LYS E 242 REMARK 465 LEU E 243 REMARK 465 TYR E 244 REMARK 465 GLY E 245 REMARK 465 PRO E 246 REMARK 465 THR E 247 REMARK 465 ASP E 248 REMARK 465 ARG E 249 REMARK 465 ASP E 250
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS D 119 CG ND1 CD2 CE1 NE2 REMARK 470 ARG D 122 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 209 CG CD NE CZ NH1 NH2 REMARK 470 ALA E 207 O
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN D 197 9.88 -69.58 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OQ0 RELATED DB: PDB REMARK 900 (6XHIS)DBF4-N
DBREF 3OQ4 A 120 250 UNP P32325 DBF4_YEAST 120 250 DBREF 3OQ4 B 120 250 UNP P32325 DBF4_YEAST 120 250 DBREF 3OQ4 C 120 250 UNP P32325 DBF4_YEAST 120 250 DBREF 3OQ4 D 120 250 UNP P32325 DBF4_YEAST 120 250 DBREF 3OQ4 E 120 250 UNP P32325 DBF4_YEAST 120 250
SEQADV 3OQ4 GLY A 117 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 SER A 118 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 HIS A 119 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 GLY B 117 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 SER B 118 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 HIS B 119 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 GLY C 117 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 SER C 118 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 HIS C 119 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 GLY D 117 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 SER D 118 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 HIS D 119 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 GLY E 117 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 SER E 118 UNP P32325 EXPRESSION TAG SEQADV 3OQ4 HIS E 119 UNP P32325 EXPRESSION TAG
SEQRES 1 A 134 GLY SER HIS MET LYS ARG ASP SER ARG ILE TYR PHE ASP SEQRES 2 A 134 ILE THR ASP ASP VAL GLU MET ASN THR TYR ASN LYS SER SEQRES 3 A 134 LYS MET ASP LYS ARG ARG ASP LEU LEU LYS ARG GLY PHE SEQRES 4 A 134 LEU THR LEU GLY ALA GLN ILE THR GLN PHE PHE ASP THR SEQRES 5 A 134 THR VAL THR ILE VAL ILE THR ARG ARG SER VAL GLU ASN SEQRES 6 A 134 ILE TYR LEU LEU LYS ASP THR ASP ILE LEU SER ARG ALA SEQRES 7 A 134 LYS LYS ASN TYR MET LYS VAL TRP SER TYR GLU LYS ALA SEQRES 8 A 134 ALA ARG PHE LEU LYS ASN LEU ASP VAL ASP LEU ASP HIS SEQRES 9 A 134 LEU SER LYS THR LYS SER ALA SER LEU ALA ALA PRO THR SEQRES 10 A 134 LEU SER ASN LEU LEU HIS ASN GLU LYS LEU TYR GLY PRO SEQRES 11 A 134 THR ASP ARG ASP SEQRES 1 B 134 GLY SER HIS MET LYS ARG ASP SER ARG ILE TYR PHE ASP SEQRES 2 B 134 ILE THR ASP ASP VAL GLU MET ASN THR TYR ASN LYS SER SEQRES 3 B 134 LYS MET ASP LYS ARG ARG ASP LEU LEU LYS ARG GLY PHE SEQRES 4 B 134 LEU THR LEU GLY ALA GLN ILE THR GLN PHE PHE ASP THR SEQRES 5 B 134 THR VAL THR ILE VAL ILE THR ARG ARG SER VAL GLU ASN SEQRES 6 B 134 ILE TYR LEU LEU LYS ASP THR ASP ILE LEU SER ARG ALA SEQRES 7 B 134 LYS LYS ASN TYR MET LYS VAL TRP SER TYR GLU LYS ALA SEQRES 8 B 134 ALA ARG PHE LEU LYS ASN LEU ASP VAL ASP LEU ASP HIS SEQRES 9 B 134 LEU SER LYS THR LYS SER ALA SER LEU ALA ALA PRO THR SEQRES 10 B 134 LEU SER ASN LEU LEU HIS ASN GLU LYS LEU TYR GLY PRO SEQRES 11 B 134 THR ASP ARG ASP SEQRES 1 C 134 GLY SER HIS MET LYS ARG ASP SER ARG ILE TYR PHE ASP SEQRES 2 C 134 ILE THR ASP ASP VAL GLU MET ASN THR TYR ASN LYS SER SEQRES 3 C 134 LYS MET ASP LYS ARG ARG ASP LEU LEU LYS ARG GLY PHE SEQRES 4 C 134 LEU THR LEU GLY ALA GLN ILE THR GLN PHE PHE ASP THR SEQRES 5 C 134 THR VAL THR ILE VAL ILE THR ARG ARG SER VAL GLU ASN SEQRES 6 C 134 ILE TYR LEU LEU LYS ASP THR ASP ILE LEU SER ARG ALA SEQRES 7 C 134 LYS LYS ASN TYR MET LYS VAL TRP SER TYR GLU LYS ALA SEQRES 8 C 134 ALA ARG PHE LEU LYS ASN LEU ASP VAL ASP LEU ASP HIS SEQRES 9 C 134 LEU SER LYS THR LYS SER ALA SER LEU ALA ALA PRO THR SEQRES 10 C 134 LEU SER ASN LEU LEU HIS ASN GLU LYS LEU TYR GLY PRO SEQRES 11 C 134 THR ASP ARG ASP SEQRES 1 D 134 GLY SER HIS MET LYS ARG ASP SER ARG ILE TYR PHE ASP SEQRES 2 D 134 ILE THR ASP ASP VAL GLU MET ASN THR TYR ASN LYS SER SEQRES 3 D 134 LYS MET ASP LYS ARG ARG ASP LEU LEU LYS ARG GLY PHE SEQRES 4 D 134 LEU THR LEU GLY ALA GLN ILE THR GLN PHE PHE ASP THR SEQRES 5 D 134 THR VAL THR ILE VAL ILE THR ARG ARG SER VAL GLU ASN SEQRES 6 D 134 ILE TYR LEU LEU LYS ASP THR ASP ILE LEU SER ARG ALA SEQRES 7 D 134 LYS LYS ASN TYR MET LYS VAL TRP SER TYR GLU LYS ALA SEQRES 8 D 134 ALA ARG PHE LEU LYS ASN LEU ASP VAL ASP LEU ASP HIS SEQRES 9 D 134 LEU SER LYS THR LYS SER ALA SER LEU ALA ALA PRO THR SEQRES 10 D 134 LEU SER ASN LEU LEU HIS ASN GLU LYS LEU TYR GLY PRO SEQRES 11 D 134 THR ASP ARG ASP SEQRES 1 E 134 GLY SER HIS MET LYS ARG ASP SER ARG ILE TYR PHE ASP SEQRES 2 E 134 ILE THR ASP ASP VAL GLU MET ASN THR TYR ASN LYS SER SEQRES 3 E 134 LYS MET ASP LYS ARG ARG ASP LEU LEU LYS ARG GLY PHE SEQRES 4 E 134 LEU THR LEU GLY ALA GLN ILE THR GLN PHE PHE ASP THR SEQRES 5 E 134 THR VAL THR ILE VAL ILE THR ARG ARG SER VAL GLU ASN SEQRES 6 E 134 ILE TYR LEU LEU LYS ASP THR ASP ILE LEU SER ARG ALA SEQRES 7 E 134 LYS LYS ASN TYR MET LYS VAL TRP SER TYR GLU LYS ALA SEQRES 8 E 134 ALA ARG PHE LEU LYS ASN LEU ASP VAL ASP LEU ASP HIS SEQRES 9 E 134 LEU SER LYS THR LYS SER ALA SER LEU ALA ALA PRO THR SEQRES 10 E 134 LEU SER ASN LEU LEU HIS ASN GLU LYS LEU TYR GLY PRO SEQRES 11 E 134 THR ASP ARG ASP
FORMUL 6 HOH *230(H2 O)
HELIX 1 1 ASN A 137 LEU A 158 1 22 HELIX 2 2 SER A 178 LEU A 185 5 8 HELIX 3 3 ASP A 189 ASN A 197 1 9 HELIX 4 4 TYR A 204 LEU A 214 1 11 HELIX 5 5 ASP A 217 SER A 222 1 6 HELIX 6 6 PRO A 232 LYS A 242 1 11 HELIX 7 7 ASN B 137 THR B 157 1 21 HELIX 8 8 SER B 178 LEU B 185 5 8 HELIX 9 9 ASP B 189 ASN B 197 1 9 HELIX 10 10 TYR B 204 LEU B 214 1 11 HELIX 11 11 ASP B 217 LYS B 223 1 7 HELIX 12 12 ASN C 137 GLY C 159 1 23 HELIX 13 13 SER C 178 LEU C 185 5 8 HELIX 14 14 ASP C 189 ASN C 197 1 9 HELIX 15 15 TYR C 204 LEU C 214 1 11 HELIX 16 16 ASN D 137 LEU D 158 1 22 HELIX 17 17 SER D 178 LEU D 185 5 8 HELIX 18 18 ASP D 189 ASN D 197 1 9 HELIX 19 19 TYR D 204 LEU D 214 1 11 HELIX 20 20 ASN E 137 LEU E 158 1 22 HELIX 21 21 ASN E 181 LEU E 185 5 5 HELIX 22 22 ASP E 189 ASN E 197 1 9 HELIX 23 23 GLU E 205 ASP E 215 1 11
SHEET 1 A 5 LYS A 200 SER A 203 0 SHEET 2 A 5 ILE A 172 THR A 175 1 N THR A 175 O TRP A 202 SHEET 3 A 5 ARG A 125 PHE A 128 1 N TYR A 127 O ILE A 172 SHEET 4 A 5 GLN A 161 THR A 163 1 O GLN A 161 N ILE A 126 SHEET 5 A 5 VAL B 134 GLU B 135 -1 O GLU B 135 N ILE A 162 SHEET 1 B 5 LYS B 200 SER B 203 0 SHEET 2 B 5 ILE B 172 THR B 175 1 N VAL B 173 O LYS B 200 SHEET 3 B 5 ARG B 125 PHE B 128 1 N TYR B 127 O ILE B 174 SHEET 4 B 5 GLN B 161 THR B 163 1 O GLN B 161 N ILE B 126 SHEET 5 B 5 VAL C 134 GLU C 135 -1 O GLU C 135 N ILE B 162 SHEET 1 C 5 LYS C 200 SER C 203 0 SHEET 2 C 5 ILE C 172 THR C 175 1 N VAL C 173 O LYS C 200 SHEET 3 C 5 ARG C 125 PHE C 128 1 N TYR C 127 O ILE C 172 SHEET 4 C 5 GLN C 161 THR C 163 1 O GLN C 161 N ILE C 126 SHEET 5 C 5 VAL D 134 GLU D 135 -1 O GLU D 135 N ILE C 162 SHEET 1 D 5 LYS D 200 SER D 203 0 SHEET 2 D 5 ILE D 172 THR D 175 1 N THR D 175 O TRP D 202 SHEET 3 D 5 ARG D 125 PHE D 128 1 N TYR D 127 O ILE D 174 SHEET 4 D 5 GLN D 161 THR D 163 1 O GLN D 161 N ILE D 126 SHEET 5 D 5 VAL E 134 GLU E 135 -1 O GLU E 135 N ILE D 162 SHEET 1 E 4 GLN E 161 ILE E 162 0 SHEET 2 E 4 ARG E 125 PHE E 128 1 N ILE E 126 O GLN E 161 SHEET 3 E 4 ILE E 172 THR E 175 1 O ILE E 174 N TYR E 127 SHEET 4 E 4 LYS E 200 SER E 203 1 O LYS E 200 N VAL E 173
CRYST1 83.714 99.707 127.045 90.00 90.00 90.00 P 21 21 2 20
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011945 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010029 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007871 0.00000