10 20 30 40 50 60 70 80 3MKP - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HORMONE 15-APR-10 3MKP
TITLE CRYSTAL STRUCTURE OF 1K1 MUTANT OF HEPATOCYTE GROWTH FACTOR/SCATTER TITLE 2 FACTOR FRAGMENT NK1 IN COMPLEX WITH HEPARIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPATOCYTE GROWTH FACTOR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 28-210; COMPND 5 SYNONYM: SCATTER FACTOR, SF, HEPATOPOEITIN-A, HEPATOCYTE GROWTH COMPND 6 FACTOR ALPHA CHAIN, HEPATOCYTE GROWTH FACTOR BETA CHAIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: GS115; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPIC9K
KEYWDS GROWTH FACTOR, SUPRAMOLECULAR ASSEMBLY, HGF/SF, MET RECEPTOR, NK1, KEYWDS 2 HORMONE
EXPDTA X-RAY DIFFRACTION
AUTHOR E.GHERARDI,D.Y.CHIRGADZE,T.L.BLUNDELL
REVDAT 1 18-AUG-10 3MKP 0
JRNL AUTH E.GHERARDI,D.Y.CHIRGADZE,M.BOCCI,C.BROCCHIERI,D.BEVAN, JRNL AUTH 2 J.KAJSTURA,G.ESPOSITO,D.LIETHA,M.ROTA,A.LERI, JRNL AUTH 3 N.MALLORQUI-FERNANDEZ,A.BANDYOPADHYAY,M.YOULES,B.MULLOY, JRNL AUTH 4 A.ROWE,M.ALISON,D.EDWARDS,V.VANNINI,T.BLUNDELL,P.ANVERSA JRNL TITL ENGINEERING A FRAGMENT OF HEPATOCYTE GROWTH FACTOR/SCATTER JRNL TITL 2 FACTOR FOR TISSUE AND ORGAN REGENERATION JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.S.ROY,S.SONI,R.HARFOUCHE,P.R.VASUDEVAN,O.HOLMES, REMARK 1 AUTH 2 H.DE JONGE,A.ROWE,A.PARASKAR,D.M.HENTSCHEL,D.CHIRGADZE, REMARK 1 AUTH 3 T.L.BLUNDELL,E.GHERARDI,R.A.MASHELKAR,S.SENGUPTA REMARK 1 TITL COUPLING GROWTH-FACTOR ENGINEERING WITH NANOTECHNOLOGY FOR REMARK 1 TITL 2 THERAPEUTIC ANGIOGENESIS REMARK 1 REF PROC.NATL.ACAD.SCI.USA 2010 REMARK 1 REFN ESSN 1091-6490 REMARK 1 PMID 20639469 REMARK 1 DOI 10.1073/PNAS.1006007107
REMARK 2 REMARK 2 RESOLUTION. 2.81 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 23907 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1287 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1758 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5461 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 204 REMARK 3 SOLVENT ATOMS : 101 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.489 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.366 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.267 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.614 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.862 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5824 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7885 ; 1.288 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 684 ; 6.449 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 259 ;34.102 ;23.861 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 990 ;18.451 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;18.211 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 807 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4292 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2469 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3896 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 207 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 83 ; 0.277 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.131 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3497 ; 2.120 ; 5.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5549 ; 3.311 ; 6.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2599 ; 2.692 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2336 ; 4.140 ; 7.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 36 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2040 19.0120 22.6190 REMARK 3 T TENSOR REMARK 3 T11: -0.0860 T22: 0.0740 REMARK 3 T33: -0.1444 T12: 0.0000 REMARK 3 T13: -0.0108 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 4.4032 L22: 5.3743 REMARK 3 L33: 2.7009 L12: 0.6770 REMARK 3 L13: 2.7256 L23: -1.1487 REMARK 3 S TENSOR REMARK 3 S11: -0.1530 S12: -0.2386 S13: -0.3552 REMARK 3 S21: -0.0064 S22: 0.3845 S23: -0.0328 REMARK 3 S31: 0.0456 S32: -0.4664 S33: -0.2315 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 127 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): 18.0980 35.5790 16.4460 REMARK 3 T TENSOR REMARK 3 T11: -0.0312 T22: -0.0405 REMARK 3 T33: -0.0527 T12: -0.0062 REMARK 3 T13: -0.0165 T23: -0.0384 REMARK 3 L TENSOR REMARK 3 L11: 7.0855 L22: 0.7152 REMARK 3 L33: 1.6303 L12: 0.8573 REMARK 3 L13: 0.9359 L23: 0.7297 REMARK 3 S TENSOR REMARK 3 S11: 0.1005 S12: 0.0866 S13: 0.0931 REMARK 3 S21: -0.0839 S22: -0.1101 S23: 0.0380 REMARK 3 S31: -0.0977 S32: -0.0316 S33: 0.0096 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 36 B 126 REMARK 3 ORIGIN FOR THE GROUP (A): 4.8140 32.6310 -4.6860 REMARK 3 T TENSOR REMARK 3 T11: -0.0485 T22: 0.0855 REMARK 3 T33: -0.1464 T12: -0.0070 REMARK 3 T13: -0.0244 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 4.4332 L22: 2.3778 REMARK 3 L33: 4.9292 L12: -0.5326 REMARK 3 L13: -0.2836 L23: 1.2282 REMARK 3 S TENSOR REMARK 3 S11: -0.0981 S12: 0.3515 S13: 0.0983 REMARK 3 S21: -0.1765 S22: 0.0932 S23: -0.0866 REMARK 3 S31: 0.1211 S32: 0.5004 S33: 0.0049 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 127 B 208 REMARK 3 ORIGIN FOR THE GROUP (A): -16.1390 33.2330 9.8030 REMARK 3 T TENSOR REMARK 3 T11: -0.0555 T22: 0.1028 REMARK 3 T33: -0.0584 T12: 0.0492 REMARK 3 T13: -0.0202 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 4.0207 L22: 0.6153 REMARK 3 L33: 1.4173 L12: 0.8485 REMARK 3 L13: 0.9591 L23: 0.3333 REMARK 3 S TENSOR REMARK 3 S11: -0.0041 S12: -0.6210 S13: 0.1629 REMARK 3 S21: 0.0112 S22: -0.0636 S23: 0.0925 REMARK 3 S31: -0.0621 S32: -0.2467 S33: 0.0677 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 36 C 126 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3070 22.3520 -34.4900 REMARK 3 T TENSOR REMARK 3 T11: -0.0588 T22: 0.0558 REMARK 3 T33: -0.1294 T12: -0.0014 REMARK 3 T13: -0.0071 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 3.4961 L22: 4.3560 REMARK 3 L33: 0.7466 L12: 0.5359 REMARK 3 L13: 1.4427 L23: -0.2968 REMARK 3 S TENSOR REMARK 3 S11: -0.0118 S12: -0.0347 S13: 0.0002 REMARK 3 S21: -0.0400 S22: -0.0705 S23: -0.0559 REMARK 3 S31: 0.0989 S32: 0.0070 S33: 0.0822 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 127 C 208 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5100 42.2050 -43.3240 REMARK 3 T TENSOR REMARK 3 T11: -0.1458 T22: 0.0479 REMARK 3 T33: 0.0853 T12: -0.1014 REMARK 3 T13: -0.0403 T23: 0.1354 REMARK 3 L TENSOR REMARK 3 L11: 8.8803 L22: 2.6486 REMARK 3 L33: 1.6515 L12: 2.1258 REMARK 3 L13: -0.6810 L23: 0.3264 REMARK 3 S TENSOR REMARK 3 S11: 0.2066 S12: -0.0169 S13: 0.4303 REMARK 3 S21: -0.0350 S22: -0.3564 S23: -0.3626 REMARK 3 S31: -0.2862 S32: 0.2204 S33: 0.1497 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 40 D 126 REMARK 3 ORIGIN FOR THE GROUP (A): -1.5630 36.4290 -64.2400 REMARK 3 T TENSOR REMARK 3 T11: 0.0518 T22: 0.0157 REMARK 3 T33: -0.0621 T12: 0.1292 REMARK 3 T13: 0.0487 T23: 0.1164 REMARK 3 L TENSOR REMARK 3 L11: 6.6547 L22: 4.6149 REMARK 3 L33: 10.6718 L12: -1.1934 REMARK 3 L13: -0.0786 L23: 3.1159 REMARK 3 S TENSOR REMARK 3 S11: 0.1011 S12: 0.2676 S13: 0.1772 REMARK 3 S21: -0.8199 S22: -0.3608 S23: 0.0671 REMARK 3 S31: 0.1634 S32: 0.5210 S33: 0.2597 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 127 D 208 REMARK 3 ORIGIN FOR THE GROUP (A): -20.0430 31.3470 -47.0720 REMARK 3 T TENSOR REMARK 3 T11: -0.0419 T22: -0.0326 REMARK 3 T33: 0.0002 T12: 0.0098 REMARK 3 T13: 0.0050 T23: -0.0507 REMARK 3 L TENSOR REMARK 3 L11: 2.0665 L22: 2.1590 REMARK 3 L33: 1.5846 L12: 0.3923 REMARK 3 L13: 0.2186 L23: -0.3835 REMARK 3 S TENSOR REMARK 3 S11: 0.0941 S12: -0.1822 S13: 0.0206 REMARK 3 S21: -0.0553 S22: -0.0929 S23: -0.1014 REMARK 3 S31: -0.0621 S32: 0.0078 S33: -0.0012 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS
REMARK 4 REMARK 4 3MKP COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-APR-10. REMARK 100 THE RCSB ID CODE IS RCSB058665.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAY-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25225 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : 0.08300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : 0.49800 REMARK 200 R SYM FOR SHELL (I) : 0.49800 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1BHT REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.243M AMMONIUM SULFATE, 22.295% PEG REMARK 280 3350, 0.1M NA-HEPES PH 7.5, VAPOR DIFFUSION, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.09500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 64.86500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 64.86500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.54750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 64.86500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 64.86500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.64250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 64.86500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.86500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.54750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 64.86500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.86500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 88.64250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.09500 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 28 REMARK 465 ALA A 29 REMARK 465 GLU A 30 REMARK 465 GLY A 31 REMARK 465 GLN A 32 REMARK 465 ARG A 33 REMARK 465 LYS A 34 REMARK 465 ARG A 35 REMARK 465 VAL A 209 REMARK 465 GLU A 210 REMARK 465 TYR B 28 REMARK 465 ALA B 29 REMARK 465 GLU B 30 REMARK 465 GLY B 31 REMARK 465 GLN B 32 REMARK 465 ARG B 33 REMARK 465 LYS B 34 REMARK 465 ARG B 35 REMARK 465 VAL B 209 REMARK 465 GLU B 210 REMARK 465 TYR C 28 REMARK 465 ALA C 29 REMARK 465 GLU C 30 REMARK 465 GLY C 31 REMARK 465 GLN C 32 REMARK 465 ARG C 33 REMARK 465 LYS C 34 REMARK 465 ARG C 35 REMARK 465 VAL C 209 REMARK 465 GLU C 210 REMARK 465 TYR D 28 REMARK 465 ALA D 29 REMARK 465 GLU D 30 REMARK 465 GLY D 31 REMARK 465 GLN D 32 REMARK 465 ARG D 33 REMARK 465 LYS D 34 REMARK 465 ARG D 35 REMARK 465 ARG D 36 REMARK 465 ASN D 37 REMARK 465 THR D 38 REMARK 465 ILE D 39 REMARK 465 VAL D 209 REMARK 465 GLU D 210
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 LYS A 109 CG CD CE NZ REMARK 470 ARG B 76 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 109 CG CD CE NZ REMARK 470 GLU B 208 CG CD OE1 REMARK 470 LYS C 78 CG CD CE NZ REMARK 470 LYS C 109 CG CD CE NZ REMARK 470 GLU C 159 CG CD OE1 REMARK 470 GLU C 195 CG CD OE1 REMARK 470 HIS D 40 CG ND1 CD2 CE1 NE2 REMARK 470 ILE D 53 CB CG1 CG2 CD1 REMARK 470 ASP D 54 CB CG OD1 OD2 REMARK 470 PRO D 55 CB CG CD REMARK 470 ALA D 56 CB REMARK 470 LYS D 62 CG CD CE NZ REMARK 470 VAL D 64 CG1 CG2 REMARK 470 ASP D 68 CG OD1 OD2 REMARK 470 LYS D 78 CB CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 81 4.71 -66.88 REMARK 500 SER A 141 35.15 -144.95 REMARK 500 GLU A 174 -129.99 45.92 REMARK 500 ASP A 202 75.78 -102.60 REMARK 500 ASN B 65 -71.26 -96.24 REMARK 500 PRO B 81 20.94 -76.57 REMARK 500 LYS B 94 73.91 50.07 REMARK 500 TYR B 167 55.45 -142.00 REMARK 500 GLU B 174 -128.44 39.85 REMARK 500 ASP B 202 72.43 -109.59 REMARK 500 PRO C 81 37.72 -78.31 REMARK 500 LYS C 94 66.74 60.59 REMARK 500 PRO C 100 31.06 -88.56 REMARK 500 ASN C 102 -158.04 -117.25 REMARK 500 PHE C 162 84.48 -69.21 REMARK 500 PRO C 164 -38.37 -38.85 REMARK 500 ASP C 171 56.72 39.77 REMARK 500 GLU C 174 -123.24 31.53 REMARK 500 ASP C 202 72.51 -100.47 REMARK 500 ASP D 54 65.24 93.26 REMARK 500 PRO D 81 24.51 -70.92 REMARK 500 LYS D 91 44.83 -93.39 REMARK 500 ALA D 92 -35.70 -145.01 REMARK 500 GLU D 134 -47.08 -25.15 REMARK 500 GLU D 174 -132.36 49.04 REMARK 500 ASP D 202 62.41 -106.96 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 238 DISTANCE = 6.21 ANGSTROMS
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SGN A 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SGN A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE B 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE C 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SGN C 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IDS C 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SGN C 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IDS C 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SGN C 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IDS C 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE D 211
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NK1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE NK1 OF HGF/SF REMARK 900 RELATED ID: 1BHT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE NK1 OF HGF/SF REMARK 900 RELATED ID: 1GP9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRUNCATED WILD TYPE NK1 OF HGF/SF REMARK 900 RELATED ID: 1GMN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE NK1 OF HGF/SF IN COMPLEX REMARK 900 WITH HEPARIN REMARK 900 RELATED ID: 1GMO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE NK1 OF HGF/SF IN COMPLEX REMARK 900 WITH HEPARIN
DBREF 3MKP A 28 210 UNP P14210 HGF_HUMAN 28 210 DBREF 3MKP B 28 210 UNP P14210 HGF_HUMAN 28 210 DBREF 3MKP C 28 210 UNP P14210 HGF_HUMAN 28 210 DBREF 3MKP D 28 210 UNP P14210 HGF_HUMAN 28 210
SEQADV 3MKP GLU A 132 UNP P14210 LYS 132 ENGINEERED MUTATION SEQADV 3MKP GLU A 134 UNP P14210 ARG 134 ENGINEERED MUTATION SEQADV 3MKP GLU B 132 UNP P14210 LYS 132 ENGINEERED MUTATION SEQADV 3MKP GLU B 134 UNP P14210 ARG 134 ENGINEERED MUTATION SEQADV 3MKP GLU C 132 UNP P14210 LYS 132 ENGINEERED MUTATION SEQADV 3MKP GLU C 134 UNP P14210 ARG 134 ENGINEERED MUTATION SEQADV 3MKP GLU D 132 UNP P14210 LYS 132 ENGINEERED MUTATION SEQADV 3MKP GLU D 134 UNP P14210 ARG 134 ENGINEERED MUTATION
SEQRES 1 A 183 TYR ALA GLU GLY GLN ARG LYS ARG ARG ASN THR ILE HIS SEQRES 2 A 183 GLU PHE LYS LYS SER ALA LYS THR THR LEU ILE LYS ILE SEQRES 3 A 183 ASP PRO ALA LEU LYS ILE LYS THR LYS LYS VAL ASN THR SEQRES 4 A 183 ALA ASP GLN CYS ALA ASN ARG CYS THR ARG ASN LYS GLY SEQRES 5 A 183 LEU PRO PHE THR CYS LYS ALA PHE VAL PHE ASP LYS ALA SEQRES 6 A 183 ARG LYS GLN CYS LEU TRP PHE PRO PHE ASN SER MET SER SEQRES 7 A 183 SER GLY VAL LYS LYS GLU PHE GLY HIS GLU PHE ASP LEU SEQRES 8 A 183 TYR GLU ASN LYS ASP TYR ILE ARG ASN CYS ILE ILE GLY SEQRES 9 A 183 GLU GLY GLU SER TYR LYS GLY THR VAL SER ILE THR LYS SEQRES 10 A 183 SER GLY ILE LYS CYS GLN PRO TRP SER SER MET ILE PRO SEQRES 11 A 183 HIS GLU HIS SER PHE LEU PRO SER SER TYR ARG GLY LYS SEQRES 12 A 183 ASP LEU GLN GLU ASN TYR CYS ARG ASN PRO ARG GLY GLU SEQRES 13 A 183 GLU GLY GLY PRO TRP CYS PHE THR SER ASN PRO GLU VAL SEQRES 14 A 183 ARG TYR GLU VAL CYS ASP ILE PRO GLN CYS SER GLU VAL SEQRES 15 A 183 GLU SEQRES 1 B 183 TYR ALA GLU GLY GLN ARG LYS ARG ARG ASN THR ILE HIS SEQRES 2 B 183 GLU PHE LYS LYS SER ALA LYS THR THR LEU ILE LYS ILE SEQRES 3 B 183 ASP PRO ALA LEU LYS ILE LYS THR LYS LYS VAL ASN THR SEQRES 4 B 183 ALA ASP GLN CYS ALA ASN ARG CYS THR ARG ASN LYS GLY SEQRES 5 B 183 LEU PRO PHE THR CYS LYS ALA PHE VAL PHE ASP LYS ALA SEQRES 6 B 183 ARG LYS GLN CYS LEU TRP PHE PRO PHE ASN SER MET SER SEQRES 7 B 183 SER GLY VAL LYS LYS GLU PHE GLY HIS GLU PHE ASP LEU SEQRES 8 B 183 TYR GLU ASN LYS ASP TYR ILE ARG ASN CYS ILE ILE GLY SEQRES 9 B 183 GLU GLY GLU SER TYR LYS GLY THR VAL SER ILE THR LYS SEQRES 10 B 183 SER GLY ILE LYS CYS GLN PRO TRP SER SER MET ILE PRO SEQRES 11 B 183 HIS GLU HIS SER PHE LEU PRO SER SER TYR ARG GLY LYS SEQRES 12 B 183 ASP LEU GLN GLU ASN TYR CYS ARG ASN PRO ARG GLY GLU SEQRES 13 B 183 GLU GLY GLY PRO TRP CYS PHE THR SER ASN PRO GLU VAL SEQRES 14 B 183 ARG TYR GLU VAL CYS ASP ILE PRO GLN CYS SER GLU VAL SEQRES 15 B 183 GLU SEQRES 1 C 183 TYR ALA GLU GLY GLN ARG LYS ARG ARG ASN THR ILE HIS SEQRES 2 C 183 GLU PHE LYS LYS SER ALA LYS THR THR LEU ILE LYS ILE SEQRES 3 C 183 ASP PRO ALA LEU LYS ILE LYS THR LYS LYS VAL ASN THR SEQRES 4 C 183 ALA ASP GLN CYS ALA ASN ARG CYS THR ARG ASN LYS GLY SEQRES 5 C 183 LEU PRO PHE THR CYS LYS ALA PHE VAL PHE ASP LYS ALA SEQRES 6 C 183 ARG LYS GLN CYS LEU TRP PHE PRO PHE ASN SER MET SER SEQRES 7 C 183 SER GLY VAL LYS LYS GLU PHE GLY HIS GLU PHE ASP LEU SEQRES 8 C 183 TYR GLU ASN LYS ASP TYR ILE ARG ASN CYS ILE ILE GLY SEQRES 9 C 183 GLU GLY GLU SER TYR LYS GLY THR VAL SER ILE THR LYS SEQRES 10 C 183 SER GLY ILE LYS CYS GLN PRO TRP SER SER MET ILE PRO SEQRES 11 C 183 HIS GLU HIS SER PHE LEU PRO SER SER TYR ARG GLY LYS SEQRES 12 C 183 ASP LEU GLN GLU ASN TYR CYS ARG ASN PRO ARG GLY GLU SEQRES 13 C 183 GLU GLY GLY PRO TRP CYS PHE THR SER ASN PRO GLU VAL SEQRES 14 C 183 ARG TYR GLU VAL CYS ASP ILE PRO GLN CYS SER GLU VAL SEQRES 15 C 183 GLU SEQRES 1 D 183 TYR ALA GLU GLY GLN ARG LYS ARG ARG ASN THR ILE HIS SEQRES 2 D 183 GLU PHE LYS LYS SER ALA LYS THR THR LEU ILE LYS ILE SEQRES 3 D 183 ASP PRO ALA LEU LYS ILE LYS THR LYS LYS VAL ASN THR SEQRES 4 D 183 ALA ASP GLN CYS ALA ASN ARG CYS THR ARG ASN LYS GLY SEQRES 5 D 183 LEU PRO PHE THR CYS LYS ALA PHE VAL PHE ASP LYS ALA SEQRES 6 D 183 ARG LYS GLN CYS LEU TRP PHE PRO PHE ASN SER MET SER SEQRES 7 D 183 SER GLY VAL LYS LYS GLU PHE GLY HIS GLU PHE ASP LEU SEQRES 8 D 183 TYR GLU ASN LYS ASP TYR ILE ARG ASN CYS ILE ILE GLY SEQRES 9 D 183 GLU GLY GLU SER TYR LYS GLY THR VAL SER ILE THR LYS SEQRES 10 D 183 SER GLY ILE LYS CYS GLN PRO TRP SER SER MET ILE PRO SEQRES 11 D 183 HIS GLU HIS SER PHE LEU PRO SER SER TYR ARG GLY LYS SEQRES 12 D 183 ASP LEU GLN GLU ASN TYR CYS ARG ASN PRO ARG GLY GLU SEQRES 13 D 183 GLU GLY GLY PRO TRP CYS PHE THR SER ASN PRO GLU VAL SEQRES 14 D 183 ARG TYR GLU VAL CYS ASP ILE PRO GLN CYS SER GLU VAL SEQRES 15 D 183 GLU
HET SO4 A 1 5 HET EPE A 211 15 HET SGN A 3 19 HET SO4 B 2 5 HET EPE B 211 15 HET SO4 C 3 5 HET EPE C 211 15 HET SGN C 2 19 HET IDS C 212 16 HET SGN C 4 19 HET IDS C 5 16 HET SGN C 6 19 HET IDS C 7 16 HET SO4 D 4 5 HET EPE D 211 15
HETNAM SO4 SULFATE ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM SGN N,O6-DISULFO-GLUCOSAMINE HETNAM IDS O2-SULFO-GLUCURONIC ACID
HETSYN EPE HEPES
FORMUL 5 SO4 4(O4 S 2-) FORMUL 6 EPE 4(C8 H18 N2 O4 S) FORMUL 7 SGN 4(C6 H13 N O11 S2) FORMUL 12 IDS 3(C6 H10 O10 S) FORMUL 15 HOH *101(H2 O)
HELIX 1 1 THR A 38 HIS A 40 5 3 HELIX 2 2 THR A 66 ARG A 76 1 11 HELIX 3 3 ASP A 123 ILE A 125 5 3 HELIX 4 4 LEU A 163 TYR A 167 5 5 HELIX 5 5 ASN B 37 HIS B 40 5 4 HELIX 6 6 THR B 66 ASN B 77 1 12 HELIX 7 7 ASP B 123 ILE B 125 5 3 HELIX 8 8 LEU B 163 TYR B 167 5 5 HELIX 9 9 THR C 38 HIS C 40 5 3 HELIX 10 10 THR C 66 ASN C 77 1 12 HELIX 11 11 ASP C 123 ILE C 125 5 3 HELIX 12 12 LEU C 163 TYR C 167 5 5 HELIX 13 13 THR D 66 ASN D 77 1 12 HELIX 14 14 ASP D 123 ILE D 125 5 3 HELIX 15 15 LEU D 163 TYR D 167 5 5
SHEET 1 A 5 PHE A 42 SER A 45 0 SHEET 2 A 5 PHE A 116 ASN A 121 -1 O LEU A 118 N SER A 45 SHEET 3 A 5 ALA A 86 ASP A 90 -1 N PHE A 87 O TYR A 119 SHEET 4 A 5 GLN A 95 PHE A 99 -1 O PHE A 99 N ALA A 86 SHEET 5 A 5 LYS A 60 LYS A 63 -1 N LYS A 60 O TRP A 98 SHEET 1 B 2 THR A 48 LYS A 52 0 SHEET 2 B 2 VAL A 108 PHE A 112 -1 O LYS A 109 N ILE A 51 SHEET 1 C 2 TRP A 188 PHE A 190 0 SHEET 2 C 2 TYR A 198 VAL A 200 -1 O GLU A 199 N CYS A 189 SHEET 1 D 5 PHE B 42 LYS B 52 0 SHEET 2 D 5 VAL B 108 ASN B 121 -1 O LYS B 109 N ILE B 51 SHEET 3 D 5 ALA B 86 ASP B 90 -1 N PHE B 87 O TYR B 119 SHEET 4 D 5 GLN B 95 PHE B 99 -1 O GLN B 95 N ASP B 90 SHEET 5 D 5 LYS B 60 LYS B 63 -1 N LYS B 60 O TRP B 98 SHEET 1 E 2 TRP B 188 PHE B 190 0 SHEET 2 E 2 TYR B 198 VAL B 200 -1 O GLU B 199 N CYS B 189 SHEET 1 F 5 PHE C 42 LYS C 52 0 SHEET 2 F 5 VAL C 108 ASN C 121 -1 O LEU C 118 N SER C 45 SHEET 3 F 5 ALA C 86 ASP C 90 -1 N PHE C 87 O TYR C 119 SHEET 4 F 5 GLN C 95 PHE C 99 -1 O PHE C 99 N ALA C 86 SHEET 5 F 5 LYS C 60 LYS C 63 -1 N LYS C 60 O TRP C 98 SHEET 1 G 2 TRP C 188 PHE C 190 0 SHEET 2 G 2 TYR C 198 VAL C 200 -1 O GLU C 199 N CYS C 189 SHEET 1 H 5 PHE D 42 LYS D 52 0 SHEET 2 H 5 VAL D 108 ASN D 121 -1 O LEU D 118 N SER D 45 SHEET 3 H 5 ALA D 86 ASP D 90 -1 N PHE D 87 O TYR D 119 SHEET 4 H 5 GLN D 95 PHE D 99 -1 O PHE D 99 N ALA D 86 SHEET 5 H 5 LYS D 60 LYS D 63 -1 N LYS D 60 O TRP D 98 SHEET 1 I 2 TRP D 188 PHE D 190 0 SHEET 2 I 2 TYR D 198 VAL D 200 -1 O GLU D 199 N CYS D 189
SSBOND 1 CYS A 70 CYS A 96 1555 1555 2.02 SSBOND 2 CYS A 74 CYS A 84 1555 1555 2.07 SSBOND 3 CYS A 128 CYS A 206 1555 1555 2.05 SSBOND 4 CYS A 149 CYS A 189 1555 1555 2.03 SSBOND 5 CYS A 177 CYS A 201 1555 1555 2.03 SSBOND 6 CYS B 70 CYS B 96 1555 1555 2.04 SSBOND 7 CYS B 74 CYS B 84 1555 1555 2.06 SSBOND 8 CYS B 128 CYS B 206 1555 1555 2.04 SSBOND 9 CYS B 149 CYS B 189 1555 1555 2.05 SSBOND 10 CYS B 177 CYS B 201 1555 1555 2.04 SSBOND 11 CYS C 70 CYS C 96 1555 1555 2.04 SSBOND 12 CYS C 74 CYS C 84 1555 1555 2.08 SSBOND 13 CYS C 128 CYS C 206 1555 1555 2.07 SSBOND 14 CYS C 149 CYS C 189 1555 1555 2.03 SSBOND 15 CYS C 177 CYS C 201 1555 1555 2.03 SSBOND 16 CYS D 70 CYS D 96 1555 1555 2.05 SSBOND 17 CYS D 74 CYS D 84 1555 1555 2.04 SSBOND 18 CYS D 128 CYS D 206 1555 1555 2.05 SSBOND 19 CYS D 149 CYS D 189 1555 1555 2.03 SSBOND 20 CYS D 177 CYS D 201 1555 1555 2.02
LINK O4 SGN C 4 C1 IDS C 5 1555 1555 1.43 LINK O4 IDS C 5 C1 SGN C 6 1555 1555 1.44 LINK O4 SGN C 6 C1 IDS C 7 1555 1555 1.44 LINK O4 IDS C 212 C1 SGN C 4 1555 1555 1.45 LINK O4 SGN C 2 C1 IDS C 212 1555 1555 1.45
CISPEP 1 ILE A 156 PRO A 157 0 -2.05 CISPEP 2 ILE B 156 PRO B 157 0 -6.27 CISPEP 3 ILE C 156 PRO C 157 0 -4.40 CISPEP 4 ILE D 156 PRO D 157 0 3.29
SITE 1 AC1 5 ARG A 168 GLY A 169 LYS A 170 ASP A 171 SITE 2 AC1 5 GLN A 173 SITE 1 AC2 8 GLU A 183 GLU A 184 GLY A 185 GLY A 186 SITE 2 AC2 8 TRP A 188 PHE A 190 ARG A 197 TYR A 198 SITE 1 AC3 5 ILE A 59 LYS A 60 THR A 61 LYS A 62 SITE 2 AC3 5 LYS A 63 SITE 1 AC4 7 ARG B 168 GLY B 169 LYS B 170 ASP B 171 SITE 2 AC4 7 GLN B 173 HOH B 220 HOH B 221 SITE 1 AC5 7 PHE B 162 GLU B 183 GLU B 184 GLY B 186 SITE 2 AC5 7 TRP B 188 PHE B 190 ARG B 197 SITE 1 AC6 6 ARG C 168 GLY C 169 LYS C 170 ASP C 171 SITE 2 AC6 6 LEU C 172 GLN C 173 SITE 1 AC7 9 PHE C 162 GLU C 183 GLU C 184 GLY C 186 SITE 2 AC7 9 TRP C 188 ARG C 197 TYR C 198 GLU D 111 SITE 3 AC7 9 PHE D 112 SITE 1 AC8 7 SGN C 6 IDS C 7 ARG C 73 ARG C 76 SITE 2 AC8 7 LYS C 78 GLY C 79 IDS C 212 SITE 1 AC9 8 SGN C 2 SGN C 4 IDS C 5 SGN C 6 SITE 2 AC9 8 IDS C 7 LYS C 62 ARG C 73 GLY C 79 SITE 1 BC1 7 IDS C 5 SGN C 6 LYS C 60 THR C 61 SITE 2 BC1 7 LYS C 62 LYS C 63 IDS C 212 SITE 1 BC2 7 SGN C 4 SGN C 6 THR C 61 LYS C 62 SITE 2 BC2 7 LYS C 63 ARG C 73 IDS C 212 SITE 1 BC3 9 SGN C 2 SGN C 4 IDS C 5 IDS C 7 SITE 2 BC3 9 THR C 61 LYS C 63 ARG C 73 GLN C 95 SITE 3 BC3 9 IDS C 212 SITE 1 BC4 5 SGN C 2 SGN C 6 LYS C 62 ARG C 73 SITE 2 BC4 5 IDS C 212 SITE 1 BC5 3 GLY D 169 LYS D 170 ASP D 171 SITE 1 BC6 11 HIS A 158 GLU A 159 ARG A 197 GLU D 184 SITE 2 BC6 11 GLY D 185 GLY D 186 TRP D 188 PHE D 190 SITE 3 BC6 11 ARG D 197 HOH D 220 HOH D 236
CRYST1 129.730 129.730 118.190 90.00 90.00 90.00 P 41 21 2 32
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007708 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007708 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008461 0.00000