3K62 - Header Asymmetric Unit

HEADER RNA/RNA BINDING PROTEIN 08-OCT-09 3K62

TITLE CRYSTAL STRUCTURE OF FBF-2/GLD-1 FBEB COMPLEX

COMPND MOL_ID: 1; COMPND 2 MOLECULE: FEM-3 MRNA-BINDING FACTOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 164-575, RNA-BINDING DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 5'-R(*UP*GP*UP*GP*UP*UP*AP*UP*C)-3'; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_COMMON: NEMATODE; SOURCE 4 ORGANISM_TAXID: 6239; SOURCE 5 GENE: F21H12.5, FBF-2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES

KEYWDS FBF, FEM-3 BINDING FACTOR, PUF, RNA-BINDING SPECIFICITY, KEYWDS 2 BASE FLIPPING, BASE STACKING

EXPDTA X-RAY DIFFRACTION

AUTHOR Y.WANG,L.OPPERMAN,M.WICKENS,T.M.T.HALL

REVDAT 2 22-DEC-09 3K62 1 JRNL REVDAT 1 03-NOV-09 3K62 0

JRNL AUTH Y.WANG,L.OPPERMAN,M.WICKENS,T.M.HALL JRNL TITL STRUCTURAL BASIS FOR SPECIFIC RECOGNITION OF JRNL TITL 2 MULTIPLE MRNA TARGETS BY A PUF REGULATORY PROTEIN. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 20186 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19901328 JRNL DOI 10.1073/PNAS.0812076106

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX.REFINE REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 42208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2120 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 168:193 REMARK 3 ORIGIN FOR THE GROUP (A): 21.9558 2.5143 29.5966 REMARK 3 T TENSOR REMARK 3 T11: 0.4619 T22: 0.2572 REMARK 3 T33: 0.2636 T12: -0.0555 REMARK 3 T13: 0.1181 T23: 0.2432 REMARK 3 L TENSOR REMARK 3 L11: -0.2182 L22: 1.0303 REMARK 3 L33: 3.8041 L12: 0.9676 REMARK 3 L13: 0.0203 L23: 1.3748 REMARK 3 S TENSOR REMARK 3 S11: 0.2303 S12: -0.7429 S13: -0.6149 REMARK 3 S21: 1.1649 S22: 0.2310 S23: 0.0813 REMARK 3 S31: 0.8015 S32: 0.3522 S33: 1.0945 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 194:229 REMARK 3 ORIGIN FOR THE GROUP (A): 28.5819 7.7967 20.1323 REMARK 3 T TENSOR REMARK 3 T11: 0.2037 T22: 0.1835 REMARK 3 T33: 0.2507 T12: 0.0322 REMARK 3 T13: -0.0177 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 0.3239 L22: 0.5864 REMARK 3 L33: 0.7544 L12: 0.2240 REMARK 3 L13: 0.0242 L23: -0.5063 REMARK 3 S TENSOR REMARK 3 S11: 0.1760 S12: -0.1885 S13: -0.1123 REMARK 3 S21: 0.2070 S22: 0.1408 S23: 0.1029 REMARK 3 S31: 0.0354 S32: -0.0719 S33: 0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 230:276 REMARK 3 ORIGIN FOR THE GROUP (A): 30.5450 8.8713 8.1718 REMARK 3 T TENSOR REMARK 3 T11: 0.1884 T22: 0.1699 REMARK 3 T33: 0.2128 T12: 0.0159 REMARK 3 T13: -0.0335 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 0.2632 L22: 0.8501 REMARK 3 L33: 1.9578 L12: -0.1115 REMARK 3 L13: 1.2748 L23: -0.7348 REMARK 3 S TENSOR REMARK 3 S11: 0.1007 S12: 0.0427 S13: -0.2946 REMARK 3 S21: -0.1126 S22: 0.0505 S23: 0.0521 REMARK 3 S31: 0.0820 S32: 0.1845 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 277:313 REMARK 3 ORIGIN FOR THE GROUP (A): 26.7466 15.7336 -1.0278 REMARK 3 T TENSOR REMARK 3 T11: 0.1708 T22: 0.1860 REMARK 3 T33: 0.1827 T12: 0.0436 REMARK 3 T13: -0.0373 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.3801 L22: 0.5784 REMARK 3 L33: 0.4129 L12: -0.6144 REMARK 3 L13: 0.2567 L23: -1.1545 REMARK 3 S TENSOR REMARK 3 S11: 0.1445 S12: -0.1141 S13: -0.1960 REMARK 3 S21: -0.0898 S22: 0.0116 S23: 0.1102 REMARK 3 S31: 0.1671 S32: 0.1257 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESID 314:349 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9427 22.4756 -8.2138 REMARK 3 T TENSOR REMARK 3 T11: 0.1219 T22: 0.1796 REMARK 3 T33: 0.1589 T12: 0.0277 REMARK 3 T13: -0.0287 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.9535 L22: 0.7077 REMARK 3 L33: 0.5481 L12: -0.7223 REMARK 3 L13: 0.8403 L23: -0.6245 REMARK 3 S TENSOR REMARK 3 S11: 0.2387 S12: 0.0803 S13: -0.2671 REMARK 3 S21: -0.0992 S22: 0.0089 S23: 0.1729 REMARK 3 S31: 0.0859 S32: 0.1161 S33: 0.0029 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND RESID 350:404 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0126 32.0339 -13.0817 REMARK 3 T TENSOR REMARK 3 T11: 0.1235 T22: 0.2402 REMARK 3 T33: 0.1304 T12: 0.0384 REMARK 3 T13: 0.0025 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 1.3250 L22: 1.5273 REMARK 3 L33: -0.1248 L12: -0.7686 REMARK 3 L13: 0.3290 L23: -0.9444 REMARK 3 S TENSOR REMARK 3 S11: 0.1835 S12: 0.3086 S13: 0.1101 REMARK 3 S21: -0.0947 S22: -0.0346 S23: 0.1957 REMARK 3 S31: -0.0208 S32: 0.0447 S33: 0.0059 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND RESID 405:441 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5454 41.2171 -16.4495 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.2264 REMARK 3 T33: 0.2060 T12: 0.0506 REMARK 3 T13: 0.0292 T23: 0.0619 REMARK 3 L TENSOR REMARK 3 L11: 0.5984 L22: 1.4039 REMARK 3 L33: -0.5590 L12: -1.4044 REMARK 3 L13: -0.3767 L23: -0.5725 REMARK 3 S TENSOR REMARK 3 S11: 0.2061 S12: 0.0862 S13: -0.1394 REMARK 3 S21: -0.2732 S22: -0.1279 S23: -0.0206 REMARK 3 S31: -0.0243 S32: 0.0906 S33: 0.0011 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND RESID 442:487 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5494 52.1106 -19.8223 REMARK 3 T TENSOR REMARK 3 T11: 0.2260 T22: 0.1831 REMARK 3 T33: 0.1591 T12: 0.0376 REMARK 3 T13: 0.0333 T23: 0.0472 REMARK 3 L TENSOR REMARK 3 L11: 0.8818 L22: 1.8106 REMARK 3 L33: 0.1327 L12: -0.7753 REMARK 3 L13: -0.5430 L23: -0.4012 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: 0.0835 S13: 0.0355 REMARK 3 S21: -0.4559 S22: -0.0866 S23: 0.0031 REMARK 3 S31: 0.1595 S32: 0.0537 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND RESID 488:545 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9142 61.2483 -13.8073 REMARK 3 T TENSOR REMARK 3 T11: 0.1525 T22: 0.1726 REMARK 3 T33: 0.1099 T12: 0.0012 REMARK 3 T13: 0.0098 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 1.1450 L22: 2.0867 REMARK 3 L33: 1.2419 L12: -0.6035 REMARK 3 L13: -0.1278 L23: -0.7875 REMARK 3 S TENSOR REMARK 3 S11: -0.0283 S12: -0.1208 S13: 0.1930 REMARK 3 S21: -0.0347 S22: -0.0837 S23: -0.0716 REMARK 3 S31: -0.0767 S32: 0.2049 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND RESID 546:567 REMARK 3 ORIGIN FOR THE GROUP (A): -0.0190 64.0343 -5.4857 REMARK 3 T TENSOR REMARK 3 T11: 0.2756 T22: 0.2961 REMARK 3 T33: 0.1430 T12: -0.0033 REMARK 3 T13: -0.0153 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.2583 L22: 0.2567 REMARK 3 L33: 0.3733 L12: 0.2044 REMARK 3 L13: -0.4178 L23: -0.2597 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: -0.5304 S13: 0.1707 REMARK 3 S21: 0.1839 S22: -0.0436 S23: 0.1851 REMARK 3 S31: -0.4534 S32: 0.0600 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 10.1234 33.3198 2.3739 REMARK 3 T TENSOR REMARK 3 T11: 0.3734 T22: 0.3268 REMARK 3 T33: 0.2823 T12: 0.1552 REMARK 3 T13: 0.0720 T23: 0.1422 REMARK 3 L TENSOR REMARK 3 L11: -0.3139 L22: -0.3049 REMARK 3 L33: -0.8152 L12: -0.6281 REMARK 3 L13: 0.4489 L23: -0.4539 REMARK 3 S TENSOR REMARK 3 S11: -0.2126 S12: -0.1630 S13: -0.0941 REMARK 3 S21: 0.2766 S22: 0.1282 S23: 0.1066 REMARK 3 S31: -0.0641 S32: 0.0817 S33: -0.0035 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 3K62 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-09. REMARK 100 THE RCSB ID CODE IS RCSB055591.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42208 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 27.892 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 11.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.80700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3K5Q REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 7.5, 10% REMARK 280 POLYETHYLENE GLYCOL 8000, AND 8% ETHYLENE GLYCOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.89267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.78533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.83900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 84.73167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.94633 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 164 REMARK 465 ASN A 165 REMARK 465 ASN A 166 REMARK 465 VAL A 167 REMARK 465 THR A 568 REMARK 465 HIS A 569 REMARK 465 PRO A 570 REMARK 465 ILE A 571 REMARK 465 TYR A 572 REMARK 465 GLU A 573 REMARK 465 LEU A 574 REMARK 465 GLN A 575

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G B 2 P G B 2 OP1 0.284 REMARK 500 G B 2 P G B 2 OP2 -0.105 REMARK 500 U B 1 O3' G B 2 P -0.112 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G B 2 O3' - P - OP2 ANGL. DEV. = 6.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 182 11.96 80.26 REMARK 500 ASN A 258 49.04 -88.17 REMARK 500 ASP A 312 -154.30 -113.39 REMARK 500 ARG A 441 -5.31 74.70 REMARK 500 GLU A 522 146.08 -178.21 REMARK 500 REMARK 500 REMARK: NULL

REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 636 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH A 753 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH A 767 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH A 798 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A 810 DISTANCE = 6.69 ANGSTROMS

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3K5Q RELATED DB: PDB REMARK 900 RELATED ID: 3K5Y RELATED DB: PDB REMARK 900 RELATED ID: 3K5Z RELATED DB: PDB REMARK 900 RELATED ID: 3K61 RELATED DB: PDB REMARK 900 RELATED ID: 3K64 RELATED DB: PDB

DBREF 3K62 A 164 575 UNP Q09312 FBF2_CAEEL 164 575 DBREF 3K62 B 1 9 PDB 3K62 3K62 1 9

SEQRES 1 A 412 SER ASN ASN VAL LEU PRO THR TRP SER LEU ASP SER ASN SEQRES 2 A 412 GLY GLU MET ARG SER ARG LEU SER LEU SER GLU VAL LEU SEQRES 3 A 412 ASP SER GLY ASP LEU MET LYS PHE ALA VAL ASP LYS THR SEQRES 4 A 412 GLY CYS GLN PHE LEU GLU LYS ALA VAL LYS GLY SER LEU SEQRES 5 A 412 THR SER TYR GLN LYS PHE GLN LEU PHE GLU GLN VAL ILE SEQRES 6 A 412 GLY ARG LYS ASP ASP PHE LEU LYS LEU SER THR ASN ILE SEQRES 7 A 412 PHE GLY ASN TYR LEU VAL GLN SER VAL ILE GLY ILE SER SEQRES 8 A 412 LEU ALA THR ASN ASP ASP GLY TYR THR LYS ARG GLN GLU SEQRES 9 A 412 LYS LEU LYS ASN PHE ILE SER SER GLN MET THR ASP MET SEQRES 10 A 412 CYS LEU ASP LYS PHE ALA CYS ARG VAL ILE GLN SER SER SEQRES 11 A 412 LEU GLN ASN MET ASP LEU SER LEU ALA CYS LYS LEU VAL SEQRES 12 A 412 GLN ALA LEU PRO ARG ASP ALA ARG LEU ILE ALA ILE CYS SEQRES 13 A 412 VAL ASP GLN ASN ALA ASN HIS VAL ILE GLN LYS VAL VAL SEQRES 14 A 412 ALA VAL ILE PRO LEU LYS ASN TRP GLU PHE ILE VAL ASP SEQRES 15 A 412 PHE VAL ALA THR PRO GLU HIS LEU ARG GLN ILE CYS SER SEQRES 16 A 412 ASP LYS TYR GLY CYS ARG VAL VAL GLN THR ILE ILE GLU SEQRES 17 A 412 LYS LEU THR ALA ASP SER MET ASN VAL ASP LEU THR SER SEQRES 18 A 412 ALA ALA GLN ASN LEU ARG GLU ARG ALA LEU GLN ARG LEU SEQRES 19 A 412 MET THR SER VAL THR ASN ARG CYS GLN GLU LEU ALA THR SEQRES 20 A 412 ASN GLU TYR ALA ASN TYR ILE ILE GLN HIS ILE VAL SER SEQRES 21 A 412 ASN ASP ASP LEU ALA VAL TYR ARG GLU CYS ILE ILE GLU SEQRES 22 A 412 LYS CYS LEU MET ARG ASN LEU LEU SER LEU SER GLN GLU SEQRES 23 A 412 LYS PHE ALA SER HIS VAL VAL GLU LYS ALA PHE LEU HIS SEQRES 24 A 412 ALA PRO LEU GLU LEU LEU ALA GLU MET MET ASP GLU ILE SEQRES 25 A 412 PHE ASP GLY TYR ILE PRO HIS PRO ASP THR GLY LYS ASP SEQRES 26 A 412 ALA LEU ASP ILE MET MET PHE HIS GLN PHE GLY ASN TYR SEQRES 27 A 412 VAL VAL GLN CYS MET LEU THR ILE CYS CYS ASP ALA VAL SEQRES 28 A 412 SER GLY ARG ARG GLN THR LYS GLU GLY GLY TYR ASP HIS SEQRES 29 A 412 ALA ILE SER PHE GLN ASP TRP LEU LYS LYS LEU HIS SER SEQRES 30 A 412 ARG VAL THR LYS GLU ARG HIS ARG LEU SER ARG PHE SER SEQRES 31 A 412 SER GLY LYS LYS MET ILE GLU THR LEU ALA ASN LEU ARG SEQRES 32 A 412 SER THR HIS PRO ILE TYR GLU LEU GLN SEQRES 1 B 9 U G U G U U A U C

FORMUL 3 HOH *417(H2 O)

HELIX 1 1 PRO A 169 LEU A 173 5 5 HELIX 2 2 SER A 184 GLY A 192 1 9 HELIX 3 3 ASP A 193 VAL A 199 1 7 HELIX 4 4 ASP A 200 VAL A 211 1 12 HELIX 5 5 THR A 216 ILE A 228 1 13 HELIX 6 6 ARG A 230 THR A 239 1 10 HELIX 7 7 PHE A 242 THR A 257 1 16 HELIX 8 8 GLY A 261 GLN A 276 1 16 HELIX 9 9 GLN A 276 ASP A 283 1 8 HELIX 10 10 PHE A 285 MET A 297 1 13 HELIX 11 11 ASP A 298 ALA A 308 1 11 HELIX 12 12 ASP A 312 ASP A 321 1 10 HELIX 13 13 ALA A 324 ILE A 335 1 12 HELIX 14 14 PRO A 336 THR A 349 1 14 HELIX 15 15 THR A 349 SER A 358 1 10 HELIX 16 16 ASP A 359 LEU A 373 1 15 HELIX 17 17 ASP A 376 VAL A 380 5 5 HELIX 18 18 THR A 383 ARG A 404 1 22 HELIX 19 19 ARG A 404 ASN A 411 1 8 HELIX 20 20 ALA A 414 ASN A 424 1 11 HELIX 21 21 LEU A 427 LEU A 439 1 13 HELIX 22 22 ASN A 442 GLN A 448 1 7 HELIX 23 23 PHE A 451 ALA A 463 1 13 HELIX 24 24 PRO A 464 GLY A 478 1 15 HELIX 25 25 ASP A 488 HIS A 496 1 9 HELIX 26 26 PHE A 498 SER A 515 1 18 HELIX 27 27 HIS A 527 GLU A 545 1 19 HELIX 28 28 GLU A 545 SER A 550 1 6 HELIX 29 29 PHE A 552 SER A 567 1 16

SHEET 1 A 2 LYS A 521 GLU A 522 0 SHEET 2 A 2 TYR A 525 ASP A 526 -1 O TYR A 525 N GLU A 522

SSBOND 1 CYS A 405 CYS A 438 1555 1555 2.04

CRYST1 96.620 96.620 101.678 90.00 90.00 120.00 P 61 6

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.010350 0.005975 0.000000 0.00000

SCALE2 0.000000 0.011951 0.000000 0.00000

SCALE3 0.000000 0.000000 0.009835 0.00000