10 20 30 40 50 60 70 80 3JU5 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 14-SEP-09 3JU5
TITLE CRYSTAL STRUCTURE OF DIMERIC ARGININE KINASE AT 1.75-A TITLE 2 RESOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININE KINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: AK; COMPND 5 EC: 2.7.3.3; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: APOSTICHOPUS JAPONICUS; SOURCE 3 ORGANISM_COMMON: SEA CUCUMBER; SOURCE 4 ORGANISM_TAXID: 307972; SOURCE 5 GENE: AK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-22B
KEYWDS ARGININE KINASE, RECIPROCATING MECHANISM, NEGATIVE KEYWDS 2 COOPERATIVITY, PHOSPHAGEN KINASE, ATP-BINDING, KINASE, KEYWDS 3 NUCLEOTIDE-BINDING, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR X.WU,S.YE,S.GUO,W.YAN,M.BARTLAM,Z.RAO
REVDAT 3 19-JAN-10 3JU5 1 JRNL REVDAT 2 13-OCT-09 3JU5 1 JRNL REVDAT 1 29-SEP-09 3JU5 0
JRNL AUTH X.WU,S.YE,S.GUO,W.YAN,M.BARTLAM,Z.RAO JRNL TITL STRUCTURAL BASIS FOR A RECIPROCATING MECHANISM OF JRNL TITL 2 NEGATIVE COOPERATIVITY IN DIMERIC PHOSPHAGEN KINASE JRNL TITL 3 ACTIVITY JRNL REF FASEB J. V. 24 242 2010 JRNL REFN ISSN 0892-6638 JRNL PMID 19783784 JRNL DOI 10.1096/FJ.09-140194
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 132173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7021 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7689 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 410 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11671 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 1711 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.127 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.442 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11898 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15998 ; 1.989 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1477 ; 6.235 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 573 ;36.690 ;24.206 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2270 ;16.152 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 84 ;19.227 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1729 ; 0.148 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8940 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7261 ; 1.244 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11710 ; 1.994 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4637 ; 3.392 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4274 ; 5.307 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3JU5 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-SEP-09. REMARK 100 THE RCSB ID CODE IS RCSB055162.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 132173 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 86.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.49700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS (PH 6.6), 12% PEG REMARK 280 1000, VAPOR DIFFUSION, HANGING DROP
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.93400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLY A 315 REMARK 465 GLU A 316 REMARK 465 PHE A 317 REMARK 465 THR A 318 REMARK 465 GLU A 319 REMARK 465 SER A 320 REMARK 465 MSE B 1 REMARK 465 GLU B 316 REMARK 465 PHE B 317 REMARK 465 THR B 318 REMARK 465 GLU B 319 REMARK 465 MSE C 1 REMARK 465 GLU C 316 REMARK 465 PHE C 317 REMARK 465 MSE D 1 REMARK 465 THR D 313 REMARK 465 SER D 314 REMARK 465 GLY D 315 REMARK 465 GLU D 316 REMARK 465 PHE D 317 REMARK 465 THR D 318 REMARK 465 GLU D 319 REMARK 465 SER D 320 REMARK 465 VAL D 321
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 120 CE MSE A 230 1.46 REMARK 500 O HOH B 2828 O HOH B 3083 1.92 REMARK 500 O HOH B 390 O HOH B 1041 1.96 REMARK 500 NE2 GLN C 309 NE ARG C 311 1.98 REMARK 500 OD1 ASN D 153 O HOH D 1170 2.02 REMARK 500 NZ LYS B 12 O HOH B 921 2.04 REMARK 500 OD1 ASN A 153 O HOH A 531 2.07 REMARK 500 OD1 ASN B 153 O HOH B 516 2.08 REMARK 500 O HOH C 1319 O HOH C 1333 2.09 REMARK 500 O HOH B 908 O HOH B 3066 2.09 REMARK 500 O HOH B 465 O HOH B 532 2.10 REMARK 500 O PHE A 184 O HOH A 866 2.11 REMARK 500 OE2 GLU A 251 O HOH A 464 2.12 REMARK 500 CB ASP D 366 O HOH D 1414 2.12 REMARK 500 NZ LYS A 360 O HOH A 481 2.13 REMARK 500 O HOH D 1194 O HOH D 2131 2.14 REMARK 500 CZ ARG B 307 O HOH B 1060 2.15 REMARK 500 NZ LYS D 162 O HOH D 1350 2.15 REMARK 500 O HOH B 3066 O HOH B 3073 2.16 REMARK 500 O HOH B 784 O HOH B 791 2.17 REMARK 500 CE MSE A 167 O HOH A 484 2.17 REMARK 500 N GLU C 319 O HOH C 1763 2.17 REMARK 500 O HOH A 2058 O HOH A 2363 2.18 REMARK 500 O HOH C 1011 O HOH C 1189 2.18 REMARK 500 O PRO C 187 O HOH C 2853 2.19 REMARK 500 OD1 ASP D 266 O HOH D 1757 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 3052 O HOH B 3062 2555 2.17 REMARK 500 NZ LYS A 295 O HOH A 1217 2545 2.17 REMARK 500 O HOH C 1760 O HOH D 1872 2646 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 71 CB GLU B 71 CG 0.138 REMARK 500 GLU B 355 CD GLU B 355 OE1 -0.066 REMARK 500 TYR C 46 CE2 TYR C 46 CD2 0.096 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 242 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 LEU A 278 CB - CG - CD2 ANGL. DEV. = -10.6 DEGREES REMARK 500 LEU B 183 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 ILE B 207 CG1 - CB - CG2 ANGL. DEV. = -17.9 DEGREES REMARK 500 ARG D 199 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 63 -71.61 -110.41 REMARK 500 ALA A 157 -132.98 50.13 REMARK 500 ASP A 200 -0.44 75.96 REMARK 500 ASN A 220 35.27 70.03 REMARK 500 GLU A 221 -121.57 -86.79 REMARK 500 LEU B 63 -65.70 -96.56 REMARK 500 ALA B 157 -125.92 51.74 REMARK 500 ASP B 200 -5.65 81.06 REMARK 500 GLU B 221 -119.50 -87.51 REMARK 500 SER B 314 142.55 -174.88 REMARK 500 LEU C 63 -73.09 -106.49 REMARK 500 HIS C 88 30.20 -97.80 REMARK 500 ALA C 157 -135.27 70.49 REMARK 500 ASP C 170 133.15 -37.60 REMARK 500 ARG C 186 137.65 82.93 REMARK 500 ASP C 200 -2.94 78.71 REMARK 500 GLU C 221 -120.27 -91.47 REMARK 500 LEU D 63 -62.72 -101.78 REMARK 500 HIS D 88 38.45 -94.14 REMARK 500 ALA D 157 -127.65 49.79 REMARK 500 ASP D 200 -5.80 78.92 REMARK 500 GLU D 221 -120.34 -88.63 REMARK 500 ARG D 332 -40.23 -133.22 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 371 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B1007 O REMARK 620 2 HOH A1139 O 127.2 REMARK 620 N 1
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 371 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 371
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JU6 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH AMPPNP AND ARGININE
DBREF 3JU5 A 1 370 UNP Q9XY07 KARG_STIJA 1 370 DBREF 3JU5 B 1 370 UNP Q9XY07 KARG_STIJA 1 370 DBREF 3JU5 C 1 370 UNP Q9XY07 KARG_STIJA 1 370 DBREF 3JU5 D 1 370 UNP Q9XY07 KARG_STIJA 1 370
SEQRES 1 A 370 MSE ALA ASN LEU ASN GLN LYS LYS TYR PRO ALA LYS ASP SEQRES 2 A 370 ASP PHE PRO ASN PHE GLU GLY HIS LYS SER LEU LEU SER SEQRES 3 A 370 LYS TYR LEU THR ALA ASP MSE TYR ALA LYS LEU ARG ASP SEQRES 4 A 370 VAL ALA THR PRO SER GLY TYR THR LEU ASP ARG ALA ILE SEQRES 5 A 370 GLN ASN GLY VAL ASP ASN PRO ASP PHE HIS LEU GLY LEU SEQRES 6 A 370 LEU ALA GLY ASP GLU GLU THR TYR THR VAL PHE ALA ASP SEQRES 7 A 370 LEU PHE ASP PRO VAL ILE GLU GLU TYR HIS ASN GLY PHE SEQRES 8 A 370 LYS LYS THR ASP ASN HIS LYS THR ASP LEU ASP ALA SER SEQRES 9 A 370 LYS ILE LEU ASP ASP VAL LEU ASP PRO ALA TYR VAL ILE SEQRES 10 A 370 SER SER ARG VAL ARG THR GLY ARG ASN ILE ARG GLY MSE SEQRES 11 A 370 ALA LEU SER PRO HIS VAL CYS ARG SER GLU ARG ARG ALA SEQRES 12 A 370 ILE GLU LYS MSE VAL SER GLU ALA LEU ASN SER LEU ALA SEQRES 13 A 370 ALA ASP LEU LYS GLY LYS TYR TYR SER LEU MSE LYS MSE SEQRES 14 A 370 ASP GLU LYS THR GLN GLN GLN LEU ILE ASP ASP HIS PHE SEQRES 15 A 370 LEU PHE ASP ARG PRO VAL SER ARG HIS PHE THR SER GLY SEQRES 16 A 370 GLY MSE ALA ARG ASP PHE PRO ASP GLY ARG GLY ILE TRP SEQRES 17 A 370 HIS ASN ASP LYS LYS ASN PHE LEU VAL TRP ILE ASN GLU SEQRES 18 A 370 GLU ASP HIS THR ARG ILE ILE SER MSE GLN MSE GLY GLY SEQRES 19 A 370 ASN MSE LYS GLU VAL PHE GLU ARG PHE THR ARG GLY LEU SEQRES 20 A 370 THR GLU VAL GLU LYS HIS ILE LYS ASP LYS THR GLY LYS SEQRES 21 A 370 GLU PHE MSE LYS ASN ASP HIS LEU GLY PHE VAL LEU THR SEQRES 22 A 370 CYS PRO SER ASN LEU GLY THR GLY VAL ARG CYS SER VAL SEQRES 23 A 370 HIS ALA LYS LEU PRO HIS MSE ALA LYS ASP LYS ARG PHE SEQRES 24 A 370 GLU GLU ILE CYS THR LYS MSE ARG LEU GLN LYS ARG GLY SEQRES 25 A 370 THR SER GLY GLU PHE THR GLU SER VAL GLY GLY VAL TYR SEQRES 26 A 370 ASP ILE SER ASN LEU ASP ARG LEU GLY SER SER GLU VAL SEQRES 27 A 370 GLU GLN VAL ASN CYS VAL ILE LYS GLY VAL LYS VAL LEU SEQRES 28 A 370 ILE GLU MSE GLU LYS LYS LEU GLU LYS GLY GLU SER ILE SEQRES 29 A 370 ASP ASP LEU VAL PRO LYS SEQRES 1 B 370 MSE ALA ASN LEU ASN GLN LYS LYS TYR PRO ALA LYS ASP SEQRES 2 B 370 ASP PHE PRO ASN PHE GLU GLY HIS LYS SER LEU LEU SER SEQRES 3 B 370 LYS TYR LEU THR ALA ASP MSE TYR ALA LYS LEU ARG ASP SEQRES 4 B 370 VAL ALA THR PRO SER GLY TYR THR LEU ASP ARG ALA ILE SEQRES 5 B 370 GLN ASN GLY VAL ASP ASN PRO ASP PHE HIS LEU GLY LEU SEQRES 6 B 370 LEU ALA GLY ASP GLU GLU THR TYR THR VAL PHE ALA ASP SEQRES 7 B 370 LEU PHE ASP PRO VAL ILE GLU GLU TYR HIS ASN GLY PHE SEQRES 8 B 370 LYS LYS THR ASP ASN HIS LYS THR ASP LEU ASP ALA SER SEQRES 9 B 370 LYS ILE LEU ASP ASP VAL LEU ASP PRO ALA TYR VAL ILE SEQRES 10 B 370 SER SER ARG VAL ARG THR GLY ARG ASN ILE ARG GLY MSE SEQRES 11 B 370 ALA LEU SER PRO HIS VAL CYS ARG SER GLU ARG ARG ALA SEQRES 12 B 370 ILE GLU LYS MSE VAL SER GLU ALA LEU ASN SER LEU ALA SEQRES 13 B 370 ALA ASP LEU LYS GLY LYS TYR TYR SER LEU MSE LYS MSE SEQRES 14 B 370 ASP GLU LYS THR GLN GLN GLN LEU ILE ASP ASP HIS PHE SEQRES 15 B 370 LEU PHE ASP ARG PRO VAL SER ARG HIS PHE THR SER GLY SEQRES 16 B 370 GLY MSE ALA ARG ASP PHE PRO ASP GLY ARG GLY ILE TRP SEQRES 17 B 370 HIS ASN ASP LYS LYS ASN PHE LEU VAL TRP ILE ASN GLU SEQRES 18 B 370 GLU ASP HIS THR ARG ILE ILE SER MSE GLN MSE GLY GLY SEQRES 19 B 370 ASN MSE LYS GLU VAL PHE GLU ARG PHE THR ARG GLY LEU SEQRES 20 B 370 THR GLU VAL GLU LYS HIS ILE LYS ASP LYS THR GLY LYS SEQRES 21 B 370 GLU PHE MSE LYS ASN ASP HIS LEU GLY PHE VAL LEU THR SEQRES 22 B 370 CYS PRO SER ASN LEU GLY THR GLY VAL ARG CYS SER VAL SEQRES 23 B 370 HIS ALA LYS LEU PRO HIS MSE ALA LYS ASP LYS ARG PHE SEQRES 24 B 370 GLU GLU ILE CYS THR LYS MSE ARG LEU GLN LYS ARG GLY SEQRES 25 B 370 THR SER GLY GLU PHE THR GLU SER VAL GLY GLY VAL TYR SEQRES 26 B 370 ASP ILE SER ASN LEU ASP ARG LEU GLY SER SER GLU VAL SEQRES 27 B 370 GLU GLN VAL ASN CYS VAL ILE LYS GLY VAL LYS VAL LEU SEQRES 28 B 370 ILE GLU MSE GLU LYS LYS LEU GLU LYS GLY GLU SER ILE SEQRES 29 B 370 ASP ASP LEU VAL PRO LYS SEQRES 1 C 370 MSE ALA ASN LEU ASN GLN LYS LYS TYR PRO ALA LYS ASP SEQRES 2 C 370 ASP PHE PRO ASN PHE GLU GLY HIS LYS SER LEU LEU SER SEQRES 3 C 370 LYS TYR LEU THR ALA ASP MSE TYR ALA LYS LEU ARG ASP SEQRES 4 C 370 VAL ALA THR PRO SER GLY TYR THR LEU ASP ARG ALA ILE SEQRES 5 C 370 GLN ASN GLY VAL ASP ASN PRO ASP PHE HIS LEU GLY LEU SEQRES 6 C 370 LEU ALA GLY ASP GLU GLU THR TYR THR VAL PHE ALA ASP SEQRES 7 C 370 LEU PHE ASP PRO VAL ILE GLU GLU TYR HIS ASN GLY PHE SEQRES 8 C 370 LYS LYS THR ASP ASN HIS LYS THR ASP LEU ASP ALA SER SEQRES 9 C 370 LYS ILE LEU ASP ASP VAL LEU ASP PRO ALA TYR VAL ILE SEQRES 10 C 370 SER SER ARG VAL ARG THR GLY ARG ASN ILE ARG GLY MSE SEQRES 11 C 370 ALA LEU SER PRO HIS VAL CYS ARG SER GLU ARG ARG ALA SEQRES 12 C 370 ILE GLU LYS MSE VAL SER GLU ALA LEU ASN SER LEU ALA SEQRES 13 C 370 ALA ASP LEU LYS GLY LYS TYR TYR SER LEU MSE LYS MSE SEQRES 14 C 370 ASP GLU LYS THR GLN GLN GLN LEU ILE ASP ASP HIS PHE SEQRES 15 C 370 LEU PHE ASP ARG PRO VAL SER ARG HIS PHE THR SER GLY SEQRES 16 C 370 GLY MSE ALA ARG ASP PHE PRO ASP GLY ARG GLY ILE TRP SEQRES 17 C 370 HIS ASN ASP LYS LYS ASN PHE LEU VAL TRP ILE ASN GLU SEQRES 18 C 370 GLU ASP HIS THR ARG ILE ILE SER MSE GLN MSE GLY GLY SEQRES 19 C 370 ASN MSE LYS GLU VAL PHE GLU ARG PHE THR ARG GLY LEU SEQRES 20 C 370 THR GLU VAL GLU LYS HIS ILE LYS ASP LYS THR GLY LYS SEQRES 21 C 370 GLU PHE MSE LYS ASN ASP HIS LEU GLY PHE VAL LEU THR SEQRES 22 C 370 CYS PRO SER ASN LEU GLY THR GLY VAL ARG CYS SER VAL SEQRES 23 C 370 HIS ALA LYS LEU PRO HIS MSE ALA LYS ASP LYS ARG PHE SEQRES 24 C 370 GLU GLU ILE CYS THR LYS MSE ARG LEU GLN LYS ARG GLY SEQRES 25 C 370 THR SER GLY GLU PHE THR GLU SER VAL GLY GLY VAL TYR SEQRES 26 C 370 ASP ILE SER ASN LEU ASP ARG LEU GLY SER SER GLU VAL SEQRES 27 C 370 GLU GLN VAL ASN CYS VAL ILE LYS GLY VAL LYS VAL LEU SEQRES 28 C 370 ILE GLU MSE GLU LYS LYS LEU GLU LYS GLY GLU SER ILE SEQRES 29 C 370 ASP ASP LEU VAL PRO LYS SEQRES 1 D 370 MSE ALA ASN LEU ASN GLN LYS LYS TYR PRO ALA LYS ASP SEQRES 2 D 370 ASP PHE PRO ASN PHE GLU GLY HIS LYS SER LEU LEU SER SEQRES 3 D 370 LYS TYR LEU THR ALA ASP MSE TYR ALA LYS LEU ARG ASP SEQRES 4 D 370 VAL ALA THR PRO SER GLY TYR THR LEU ASP ARG ALA ILE SEQRES 5 D 370 GLN ASN GLY VAL ASP ASN PRO ASP PHE HIS LEU GLY LEU SEQRES 6 D 370 LEU ALA GLY ASP GLU GLU THR TYR THR VAL PHE ALA ASP SEQRES 7 D 370 LEU PHE ASP PRO VAL ILE GLU GLU TYR HIS ASN GLY PHE SEQRES 8 D 370 LYS LYS THR ASP ASN HIS LYS THR ASP LEU ASP ALA SER SEQRES 9 D 370 LYS ILE LEU ASP ASP VAL LEU ASP PRO ALA TYR VAL ILE SEQRES 10 D 370 SER SER ARG VAL ARG THR GLY ARG ASN ILE ARG GLY MSE SEQRES 11 D 370 ALA LEU SER PRO HIS VAL CYS ARG SER GLU ARG ARG ALA SEQRES 12 D 370 ILE GLU LYS MSE VAL SER GLU ALA LEU ASN SER LEU ALA SEQRES 13 D 370 ALA ASP LEU LYS GLY LYS TYR TYR SER LEU MSE LYS MSE SEQRES 14 D 370 ASP GLU LYS THR GLN GLN GLN LEU ILE ASP ASP HIS PHE SEQRES 15 D 370 LEU PHE ASP ARG PRO VAL SER ARG HIS PHE THR SER GLY SEQRES 16 D 370 GLY MSE ALA ARG ASP PHE PRO ASP GLY ARG GLY ILE TRP SEQRES 17 D 370 HIS ASN ASP LYS LYS ASN PHE LEU VAL TRP ILE ASN GLU SEQRES 18 D 370 GLU ASP HIS THR ARG ILE ILE SER MSE GLN MSE GLY GLY SEQRES 19 D 370 ASN MSE LYS GLU VAL PHE GLU ARG PHE THR ARG GLY LEU SEQRES 20 D 370 THR GLU VAL GLU LYS HIS ILE LYS ASP LYS THR GLY LYS SEQRES 21 D 370 GLU PHE MSE LYS ASN ASP HIS LEU GLY PHE VAL LEU THR SEQRES 22 D 370 CYS PRO SER ASN LEU GLY THR GLY VAL ARG CYS SER VAL SEQRES 23 D 370 HIS ALA LYS LEU PRO HIS MSE ALA LYS ASP LYS ARG PHE SEQRES 24 D 370 GLU GLU ILE CYS THR LYS MSE ARG LEU GLN LYS ARG GLY SEQRES 25 D 370 THR SER GLY GLU PHE THR GLU SER VAL GLY GLY VAL TYR SEQRES 26 D 370 ASP ILE SER ASN LEU ASP ARG LEU GLY SER SER GLU VAL SEQRES 27 D 370 GLU GLN VAL ASN CYS VAL ILE LYS GLY VAL LYS VAL LEU SEQRES 28 D 370 ILE GLU MSE GLU LYS LYS LEU GLU LYS GLY GLU SER ILE SEQRES 29 D 370 ASP ASP LEU VAL PRO LYS
MODRES 3JU5 MSE A 33 MET SELENOMETHIONINE MODRES 3JU5 MSE A 130 MET SELENOMETHIONINE MODRES 3JU5 MSE A 147 MET SELENOMETHIONINE MODRES 3JU5 MSE A 167 MET SELENOMETHIONINE MODRES 3JU5 MSE A 169 MET SELENOMETHIONINE MODRES 3JU5 MSE A 197 MET SELENOMETHIONINE MODRES 3JU5 MSE A 230 MET SELENOMETHIONINE MODRES 3JU5 MSE A 232 MET SELENOMETHIONINE MODRES 3JU5 MSE A 236 MET SELENOMETHIONINE MODRES 3JU5 MSE A 263 MET SELENOMETHIONINE MODRES 3JU5 MSE A 293 MET SELENOMETHIONINE MODRES 3JU5 MSE A 306 MET SELENOMETHIONINE MODRES 3JU5 MSE A 354 MET SELENOMETHIONINE MODRES 3JU5 MSE B 33 MET SELENOMETHIONINE MODRES 3JU5 MSE B 130 MET SELENOMETHIONINE MODRES 3JU5 MSE B 147 MET SELENOMETHIONINE MODRES 3JU5 MSE B 167 MET SELENOMETHIONINE MODRES 3JU5 MSE B 169 MET SELENOMETHIONINE MODRES 3JU5 MSE B 197 MET SELENOMETHIONINE MODRES 3JU5 MSE B 230 MET SELENOMETHIONINE MODRES 3JU5 MSE B 232 MET SELENOMETHIONINE MODRES 3JU5 MSE B 236 MET SELENOMETHIONINE MODRES 3JU5 MSE B 263 MET SELENOMETHIONINE MODRES 3JU5 MSE B 293 MET SELENOMETHIONINE MODRES 3JU5 MSE B 306 MET SELENOMETHIONINE MODRES 3JU5 MSE B 354 MET SELENOMETHIONINE MODRES 3JU5 MSE C 33 MET SELENOMETHIONINE MODRES 3JU5 MSE C 130 MET SELENOMETHIONINE MODRES 3JU5 MSE C 147 MET SELENOMETHIONINE MODRES 3JU5 MSE C 167 MET SELENOMETHIONINE MODRES 3JU5 MSE C 169 MET SELENOMETHIONINE MODRES 3JU5 MSE C 197 MET SELENOMETHIONINE MODRES 3JU5 MSE C 230 MET SELENOMETHIONINE MODRES 3JU5 MSE C 232 MET SELENOMETHIONINE MODRES 3JU5 MSE C 236 MET SELENOMETHIONINE MODRES 3JU5 MSE C 263 MET SELENOMETHIONINE MODRES 3JU5 MSE C 293 MET SELENOMETHIONINE MODRES 3JU5 MSE C 306 MET SELENOMETHIONINE MODRES 3JU5 MSE C 354 MET SELENOMETHIONINE MODRES 3JU5 MSE D 33 MET SELENOMETHIONINE MODRES 3JU5 MSE D 130 MET SELENOMETHIONINE MODRES 3JU5 MSE D 147 MET SELENOMETHIONINE MODRES 3JU5 MSE D 167 MET SELENOMETHIONINE MODRES 3JU5 MSE D 169 MET SELENOMETHIONINE MODRES 3JU5 MSE D 197 MET SELENOMETHIONINE MODRES 3JU5 MSE D 230 MET SELENOMETHIONINE MODRES 3JU5 MSE D 232 MET SELENOMETHIONINE MODRES 3JU5 MSE D 236 MET SELENOMETHIONINE MODRES 3JU5 MSE D 263 MET SELENOMETHIONINE MODRES 3JU5 MSE D 293 MET SELENOMETHIONINE MODRES 3JU5 MSE D 306 MET SELENOMETHIONINE MODRES 3JU5 MSE D 354 MET SELENOMETHIONINE
HET MSE A 33 8 HET MSE A 130 8 HET MSE A 147 8 HET MSE A 167 13 HET MSE A 169 8 HET MSE A 197 8 HET MSE A 230 13 HET MSE A 232 13 HET MSE A 236 8 HET MSE A 263 8 HET MSE A 293 8 HET MSE A 306 8 HET MSE A 354 8 HET MSE B 33 8 HET MSE B 130 13 HET MSE B 147 8 HET MSE B 167 8 HET MSE B 169 8 HET MSE B 197 8 HET MSE B 230 8 HET MSE B 232 13 HET MSE B 236 8 HET MSE B 263 8 HET MSE B 293 8 HET MSE B 306 13 HET MSE B 354 8 HET MSE C 33 8 HET MSE C 130 8 HET MSE C 147 8 HET MSE C 167 8 HET MSE C 169 8 HET MSE C 197 8 HET MSE C 230 8 HET MSE C 232 13 HET MSE C 236 8 HET MSE C 263 8 HET MSE C 293 8 HET MSE C 306 8 HET MSE C 354 8 HET MSE D 33 8 HET MSE D 130 13 HET MSE D 147 8 HET MSE D 167 13 HET MSE D 169 8 HET MSE D 197 8 HET MSE D 230 8 HET MSE D 232 8 HET MSE D 236 8 HET MSE D 263 8 HET MSE D 293 8 HET MSE D 306 13 HET MSE D 354 8 HET MG A 371 1 HET MG C 371 1
HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION
FORMUL 1 MSE 52(C5 H11 N O2 SE) FORMUL 5 MG 2(MG 2+) FORMUL 7 HOH *1711(H2 O)
HELIX 1 1 ASN A 5 TYR A 9 5 5 HELIX 2 2 PRO A 10 PHE A 15 1 6 HELIX 3 3 SER A 23 LEU A 29 1 7 HELIX 4 4 THR A 30 ARG A 38 1 9 HELIX 5 5 THR A 47 ASP A 57 1 11 HELIX 6 6 GLU A 71 PHE A 76 1 6 HELIX 7 7 PHE A 76 HIS A 88 1 13 HELIX 8 8 ASP A 102 ILE A 106 5 5 HELIX 9 9 CYS A 137 SER A 154 1 18 HELIX 10 10 LEU A 155 LEU A 159 5 5 HELIX 11 11 ASP A 170 ASP A 180 1 11 HELIX 12 12 SER A 189 GLY A 195 1 7 HELIX 13 13 ASN A 235 GLY A 259 1 25 HELIX 14 14 CYS A 274 LEU A 278 5 5 HELIX 15 15 LEU A 290 LYS A 295 1 6 HELIX 16 16 ARG A 298 MSE A 306 1 9 HELIX 17 17 SER A 336 LYS A 360 1 25 HELIX 18 18 ILE A 364 VAL A 368 5 5 HELIX 19 19 ASN B 5 TYR B 9 5 5 HELIX 20 20 PRO B 10 PHE B 15 1 6 HELIX 21 21 SER B 23 LEU B 29 1 7 HELIX 22 22 THR B 30 ARG B 38 1 9 HELIX 23 23 THR B 47 ASP B 57 1 11 HELIX 24 24 GLU B 71 PHE B 76 1 6 HELIX 25 25 PHE B 76 HIS B 88 1 13 HELIX 26 26 ASP B 102 ILE B 106 5 5 HELIX 27 27 CYS B 137 LEU B 155 1 19 HELIX 28 28 ALA B 156 LEU B 159 5 4 HELIX 29 29 ASP B 170 ASP B 180 1 11 HELIX 30 30 SER B 189 GLY B 195 1 7 HELIX 31 31 ASN B 235 GLY B 259 1 25 HELIX 32 32 CYS B 274 LEU B 278 5 5 HELIX 33 33 LEU B 290 LYS B 295 1 6 HELIX 34 34 ARG B 298 MSE B 306 1 9 HELIX 35 35 SER B 336 LYS B 360 1 25 HELIX 36 36 ASN C 5 TYR C 9 5 5 HELIX 37 37 PRO C 10 PHE C 15 1 6 HELIX 38 38 SER C 23 LEU C 29 1 7 HELIX 39 39 THR C 30 ARG C 38 1 9 HELIX 40 40 THR C 47 ASN C 58 1 12 HELIX 41 41 GLU C 71 PHE C 76 1 6 HELIX 42 42 PHE C 76 HIS C 88 1 13 HELIX 43 43 ASP C 102 ILE C 106 5 5 HELIX 44 44 CYS C 137 SER C 154 1 18 HELIX 45 45 LEU C 155 LEU C 159 5 5 HELIX 46 46 ASP C 170 ASP C 180 1 11 HELIX 47 47 SER C 189 GLY C 195 1 7 HELIX 48 48 ASN C 235 GLY C 259 1 25 HELIX 49 49 CYS C 274 LEU C 278 5 5 HELIX 50 50 LEU C 290 LYS C 295 1 6 HELIX 51 51 ARG C 298 MSE C 306 1 9 HELIX 52 52 SER C 320 GLY C 322 5 3 HELIX 53 53 SER C 336 LYS C 360 1 25 HELIX 54 54 ASN D 5 TYR D 9 5 5 HELIX 55 55 PRO D 10 PHE D 15 1 6 HELIX 56 56 SER D 23 LEU D 29 1 7 HELIX 57 57 THR D 30 ARG D 38 1 9 HELIX 58 58 THR D 47 ASP D 57 1 11 HELIX 59 59 GLU D 71 PHE D 76 1 6 HELIX 60 60 PHE D 76 HIS D 88 1 13 HELIX 61 61 ASP D 102 ILE D 106 5 5 HELIX 62 62 CYS D 137 SER D 154 1 18 HELIX 63 63 LEU D 155 LEU D 159 5 5 HELIX 64 64 MSE D 167 MSE D 169 5 3 HELIX 65 65 ASP D 170 ASP D 180 1 11 HELIX 66 66 SER D 189 GLY D 195 1 7 HELIX 67 67 ASN D 235 GLY D 259 1 25 HELIX 68 68 CYS D 274 LEU D 278 5 5 HELIX 69 69 HIS D 292 ASP D 296 5 5 HELIX 70 70 ARG D 298 MSE D 306 1 9 HELIX 71 71 SER D 336 LYS D 360 1 25
SHEET 1 A 8 GLY A 161 SER A 165 0 SHEET 2 A 8 GLY A 206 ASN A 210 -1 O ILE A 207 N TYR A 164 SHEET 3 A 8 PHE A 215 ILE A 219 -1 O VAL A 217 N TRP A 208 SHEET 4 A 8 THR A 225 MSE A 232 -1 O ILE A 228 N LEU A 216 SHEET 5 A 8 VAL A 116 ARG A 125 -1 N VAL A 121 O SER A 229 SHEET 6 A 8 ARG A 283 LYS A 289 -1 O HIS A 287 N ILE A 117 SHEET 7 A 8 VAL A 324 ASN A 329 -1 O ILE A 327 N VAL A 286 SHEET 8 A 8 LEU A 308 GLY A 312 -1 N ARG A 311 O ASP A 326 SHEET 1 B 2 LYS A 264 ASN A 265 0 SHEET 2 B 2 GLY A 269 PHE A 270 -1 O GLY A 269 N ASN A 265 SHEET 1 C 8 GLY B 161 SER B 165 0 SHEET 2 C 8 GLY B 206 ASN B 210 -1 O ILE B 207 N TYR B 164 SHEET 3 C 8 PHE B 215 ILE B 219 -1 O ILE B 219 N GLY B 206 SHEET 4 C 8 THR B 225 MSE B 232 -1 O ILE B 228 N LEU B 216 SHEET 5 C 8 VAL B 116 ARG B 125 -1 N THR B 123 O ILE B 227 SHEET 6 C 8 ARG B 283 LYS B 289 -1 O SER B 285 N ARG B 120 SHEET 7 C 8 VAL B 324 ASN B 329 -1 O TYR B 325 N ALA B 288 SHEET 8 C 8 LEU B 308 THR B 313 -1 N ARG B 311 O ASP B 326 SHEET 1 D 2 LYS B 264 ASN B 265 0 SHEET 2 D 2 GLY B 269 PHE B 270 -1 O GLY B 269 N ASN B 265 SHEET 1 E 8 GLY C 161 SER C 165 0 SHEET 2 E 8 GLY C 206 ASN C 210 -1 O ILE C 207 N TYR C 164 SHEET 3 E 8 PHE C 215 ILE C 219 -1 O ILE C 219 N GLY C 206 SHEET 4 E 8 THR C 225 MSE C 232 -1 O ILE C 228 N LEU C 216 SHEET 5 E 8 VAL C 116 ARG C 125 -1 N THR C 123 O ILE C 227 SHEET 6 E 8 ARG C 283 LYS C 289 -1 O SER C 285 N ARG C 120 SHEET 7 E 8 VAL C 324 ASN C 329 -1 O TYR C 325 N ALA C 288 SHEET 8 E 8 LEU C 308 ARG C 311 -1 N ARG C 311 O ASP C 326 SHEET 1 F 2 LYS C 264 ASN C 265 0 SHEET 2 F 2 GLY C 269 PHE C 270 -1 O GLY C 269 N ASN C 265 SHEET 1 G 8 GLY D 161 SER D 165 0 SHEET 2 G 8 GLY D 206 ASN D 210 -1 O ILE D 207 N TYR D 164 SHEET 3 G 8 PHE D 215 ILE D 219 -1 O ILE D 219 N GLY D 206 SHEET 4 G 8 THR D 225 MSE D 232 -1 O ILE D 228 N LEU D 216 SHEET 5 G 8 VAL D 116 ARG D 125 -1 N THR D 123 O ILE D 227 SHEET 6 G 8 ARG D 283 LYS D 289 -1 O SER D 285 N ARG D 120 SHEET 7 G 8 VAL D 324 ASN D 329 -1 O TYR D 325 N ALA D 288 SHEET 8 G 8 LEU D 308 ARG D 311 -1 N GLN D 309 O SER D 328 SHEET 1 H 2 LYS D 264 ASN D 265 0 SHEET 2 H 2 GLY D 269 PHE D 270 -1 O GLY D 269 N ASN D 265
LINK C ASP A 32 N MSE A 33 1555 1555 1.32 LINK C MSE A 33 N TYR A 34 1555 1555 1.31 LINK C GLY A 129 N MSE A 130 1555 1555 1.35 LINK C MSE A 130 N ALA A 131 1555 1555 1.32 LINK C LYS A 146 N MSE A 147 1555 1555 1.31 LINK C MSE A 147 N VAL A 148 1555 1555 1.31 LINK C LEU A 166 N MSE A 167 1555 1555 1.32 LINK C MSE A 167 N LYS A 168 1555 1555 1.34 LINK C LYS A 168 N MSE A 169 1555 1555 1.33 LINK C MSE A 169 N ASP A 170 1555 1555 1.34 LINK C GLY A 196 N MSE A 197 1555 1555 1.33 LINK C MSE A 197 N ALA A 198 1555 1555 1.34 LINK C SER A 229 N MSE A 230 1555 1555 1.32 LINK C MSE A 230 N GLN A 231 1555 1555 1.32 LINK C GLN A 231 N MSE A 232 1555 1555 1.32 LINK C MSE A 232 N GLY A 233 1555 1555 1.31 LINK C ASN A 235 N MSE A 236 1555 1555 1.33 LINK C MSE A 236 N LYS A 237 1555 1555 1.35 LINK C PHE A 262 N MSE A 263 1555 1555 1.32 LINK C MSE A 263 N LYS A 264 1555 1555 1.31 LINK C HIS A 292 N MSE A 293 1555 1555 1.34 LINK C MSE A 293 N ALA A 294 1555 1555 1.34 LINK C LYS A 305 N MSE A 306 1555 1555 1.33 LINK C MSE A 306 N ARG A 307 1555 1555 1.34 LINK C GLU A 353 N MSE A 354 1555 1555 1.33 LINK C MSE A 354 N GLU A 355 1555 1555 1.35 LINK C ASP B 32 N MSE B 33 1555 1555 1.33 LINK C MSE B 33 N TYR B 34 1555 1555 1.32 LINK C GLY B 129 N MSE B 130 1555 1555 1.35 LINK C MSE B 130 N ALA B 131 1555 1555 1.35 LINK C LYS B 146 N MSE B 147 1555 1555 1.34 LINK C MSE B 147 N VAL B 148 1555 1555 1.34 LINK C LEU B 166 N MSE B 167 1555 1555 1.31 LINK C MSE B 167 N LYS B 168 1555 1555 1.32 LINK C LYS B 168 N MSE B 169 1555 1555 1.33 LINK C MSE B 169 N ASP B 170 1555 1555 1.32 LINK C GLY B 196 N MSE B 197 1555 1555 1.36 LINK C MSE B 197 N ALA B 198 1555 1555 1.32 LINK C SER B 229 N MSE B 230 1555 1555 1.35 LINK C MSE B 230 N GLN B 231 1555 1555 1.32 LINK C GLN B 231 N MSE B 232 1555 1555 1.33 LINK C MSE B 232 N GLY B 233 1555 1555 1.31 LINK C ASN B 235 N MSE B 236 1555 1555 1.34 LINK C MSE B 236 N LYS B 237 1555 1555 1.33 LINK C PHE B 262 N MSE B 263 1555 1555 1.33 LINK C MSE B 263 N LYS B 264 1555 1555 1.34 LINK C HIS B 292 N MSE B 293 1555 1555 1.34 LINK C MSE B 293 N ALA B 294 1555 1555 1.35 LINK C LYS B 305 N MSE B 306 1555 1555 1.34 LINK C MSE B 306 N ARG B 307 1555 1555 1.34 LINK C GLU B 353 N MSE B 354 1555 1555 1.33 LINK C MSE B 354 N GLU B 355 1555 1555 1.32 LINK C ASP C 32 N MSE C 33 1555 1555 1.32 LINK C MSE C 33 N TYR C 34 1555 1555 1.33 LINK C GLY C 129 N MSE C 130 1555 1555 1.35 LINK C MSE C 130 N ALA C 131 1555 1555 1.32 LINK C LYS C 146 N MSE C 147 1555 1555 1.33 LINK C MSE C 147 N VAL C 148 1555 1555 1.34 LINK C LEU C 166 N MSE C 167 1555 1555 1.33 LINK C MSE C 167 N LYS C 168 1555 1555 1.33 LINK C LYS C 168 N MSE C 169 1555 1555 1.33 LINK C MSE C 169 N ASP C 170 1555 1555 1.33 LINK C GLY C 196 N MSE C 197 1555 1555 1.33 LINK C MSE C 197 N ALA C 198 1555 1555 1.33 LINK C SER C 229 N MSE C 230 1555 1555 1.31 LINK C MSE C 230 N GLN C 231 1555 1555 1.33 LINK C GLN C 231 N MSE C 232 1555 1555 1.33 LINK C MSE C 232 N GLY C 233 1555 1555 1.33 LINK C ASN C 235 N MSE C 236 1555 1555 1.32 LINK C MSE C 236 N LYS C 237 1555 1555 1.34 LINK C PHE C 262 N MSE C 263 1555 1555 1.33 LINK C MSE C 263 N LYS C 264 1555 1555 1.33 LINK C HIS C 292 N MSE C 293 1555 1555 1.33 LINK C MSE C 293 N ALA C 294 1555 1555 1.35 LINK C LYS C 305 N MSE C 306 1555 1555 1.32 LINK C MSE C 306 N ARG C 307 1555 1555 1.33 LINK C GLU C 353 N MSE C 354 1555 1555 1.34 LINK C MSE C 354 N GLU C 355 1555 1555 1.32 LINK C ASP D 32 N MSE D 33 1555 1555 1.34 LINK C MSE D 33 N TYR D 34 1555 1555 1.33 LINK C GLY D 129 N MSE D 130 1555 1555 1.33 LINK C MSE D 130 N ALA D 131 1555 1555 1.32 LINK C LYS D 146 N MSE D 147 1555 1555 1.33 LINK C MSE D 147 N VAL D 148 1555 1555 1.34 LINK C LEU D 166 N MSE D 167 1555 1555 1.31 LINK C MSE D 167 N LYS D 168 1555 1555 1.33 LINK C LYS D 168 N MSE D 169 1555 1555 1.33 LINK C MSE D 169 N ASP D 170 1555 1555 1.33 LINK C GLY D 196 N MSE D 197 1555 1555 1.33 LINK C MSE D 197 N ALA D 198 1555 1555 1.35 LINK C SER D 229 N MSE D 230 1555 1555 1.35 LINK C MSE D 230 N GLN D 231 1555 1555 1.32 LINK C GLN D 231 N MSE D 232 1555 1555 1.35 LINK C MSE D 232 N GLY D 233 1555 1555 1.30 LINK C ASN D 235 N MSE D 236 1555 1555 1.33 LINK C MSE D 236 N LYS D 237 1555 1555 1.34 LINK C PHE D 262 N MSE D 263 1555 1555 1.32 LINK C MSE D 263 N LYS D 264 1555 1555 1.32 LINK C HIS D 292 N MSE D 293 1555 1555 1.34 LINK C MSE D 293 N ALA D 294 1555 1555 1.33 LINK C LYS D 305 N MSE D 306 1555 1555 1.34 LINK C MSE D 306 N ARG D 307 1555 1555 1.33 LINK C GLU D 353 N MSE D 354 1555 1555 1.34 LINK C MSE D 354 N GLU D 355 1555 1555 1.32 LINK MG MG A 371 O HOH B1007 1555 1555 2.85 LINK MG MG A 371 O HOH A1139 1555 1555 2.95
CISPEP 1 PHE A 201 PRO A 202 0 2.03 CISPEP 2 PHE B 201 PRO B 202 0 7.00 CISPEP 3 PHE C 201 PRO C 202 0 8.77 CISPEP 4 PHE D 201 PRO D 202 0 7.00
SITE 1 AC1 4 ALA A 2 ARG A 50 HOH A1139 HOH B1007 SITE 1 AC2 3 ALA C 2 ARG C 50 HOH C 414
CRYST1 86.881 59.868 139.873 90.00 92.72 90.00 P 1 21 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011510 0.000000 0.000547 0.00000
SCALE2 0.000000 0.016703 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007157 0.00000