10 20 30 40 50 60 70 80 3JTP - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 14-SEP-09 3JTP
TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF MECA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADAPTER PROTEIN MECA 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN, UNP RESIDUES 121-218; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: MECA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1
KEYWDS MECA;ADAPTOR PROTEIN;DEGRADATION TAG, COMPETENCE, KEYWDS 2 SPORULATION, PROTEIN BINDING
EXPDTA X-RAY DIFFRACTION
AUTHOR F.WANG,Z.MEI,Y.QI,C.YAN,J.WANG,Y.SHI
REVDAT 1 29-SEP-09 3JTP 0
JRNL AUTH F.WANG,Z.MEI,Y.QI,C.YAN,S.XIANG,Z.ZHOU,Q.HU,J.WANG, JRNL AUTH 2 Y.SHI JRNL TITL CRYSTAL STRUCTURE OF THE MECA DEGRADATION TAG JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 39823 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 2059 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.5214 - 5.3209 0.99 2573 193 0.2388 0.2923 REMARK 3 2 5.3209 - 4.2355 1.00 2656 143 0.1898 0.2241 REMARK 3 3 4.2355 - 3.7037 1.00 2650 146 0.1808 0.2258 REMARK 3 4 3.7037 - 3.3667 1.00 2773 0 0.1989 0.0000 REMARK 3 5 3.3667 - 3.1263 0.99 2619 184 0.2283 0.2894 REMARK 3 6 3.1263 - 2.9425 0.99 2506 221 0.2363 0.2579 REMARK 3 7 2.9425 - 2.7955 0.97 2722 0 0.2439 0.0000 REMARK 3 8 2.7955 - 2.6741 0.96 2441 205 0.2525 0.3337 REMARK 3 9 2.6741 - 2.5713 0.95 2447 241 0.2455 0.3176 REMARK 3 10 2.5713 - 2.4828 0.94 2626 0 0.2539 0.0000 REMARK 3 11 2.4828 - 2.4053 0.94 2371 248 0.2319 0.3185 REMARK 3 12 2.4053 - 2.3366 0.91 2563 0 0.2372 0.0000 REMARK 3 13 2.3366 - 2.2752 0.90 2246 232 0.2585 0.3245 REMARK 3 14 2.2752 - 2.2197 0.89 2498 0 0.2547 0.0000 REMARK 3 15 2.2197 - 2.1693 0.83 2073 246 0.2611 0.3426 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 66.59 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 13.80900 REMARK 3 B22 (A**2) : -8.26100 REMARK 3 B33 (A**2) : -5.54700 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3119 REMARK 3 ANGLE : 1.234 4197 REMARK 3 CHIRALITY : 0.091 467 REMARK 3 PLANARITY : 0.004 531 REMARK 3 DIHEDRAL : 18.955 1123 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FILE CONTAINS FRIEDEL PAIRS IN REMARK 3 THE _REFLN.PDBX_F_PLUS AND _REFLN.PDBX_F_MINUS COLUMNS.
REMARK 4 REMARK 4 3JTP COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-SEP-09. REMARK 100 THE RCSB ID CODE IS RCSB055146.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43892 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 20.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 36.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : 0.43100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.550 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 3350, 300MM CALCIUM REMARK 280 CHLORIDE, 4% ETHYLENE GLYCOL,0.1M BIS-TRIS PH6.2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.80350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.80350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.75900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.63500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.75900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.63500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.80350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.75900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.63500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.80350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.75900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.63500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 I IOD A 105 LIES ON A SPECIAL POSITION. REMARK 375 I IOD C 102 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 2 REMARK 465 GLU A 3 REMARK 465 LYS A 4 REMARK 465 GLU A 5 REMARK 465 GLN A 6 REMARK 465 LYS A 7 REMARK 465 GLU B 2 REMARK 465 GLU B 3 REMARK 465 LYS B 4 REMARK 465 GLU B 5 REMARK 465 GLN B 6 REMARK 465 GLU C 2 REMARK 465 GLU C 3 REMARK 465 LYS C 4 REMARK 465 GLU C 5 REMARK 465 GLN C 6 REMARK 465 GLU D 2 REMARK 465 GLU D 3 REMARK 465 LYS D 4 REMARK 465 GLU D 5 REMARK 465 GLN D 6
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 109 O HOH B 121 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 117 O HOH D 119 3556 1.92 REMARK 500 ND1 HIS A 75 OE1 GLU B 78 4557 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 29 91.41 -47.81 REMARK 500 SER A 31 -137.31 38.67 REMARK 500 ASN A 40 -5.81 82.42 REMARK 500 CYS A 49 -77.58 -7.09 REMARK 500 ASP A 53 -5.13 -52.56 REMARK 500 GLU A 87 -43.16 76.00 REMARK 500 ASN B 40 -2.92 78.27 REMARK 500 ASP B 50 40.69 -108.26 REMARK 500 GLU B 87 -40.23 68.99 REMARK 500 VAL C 28 -84.59 -97.54 REMARK 500 ASN C 29 11.84 49.62 REMARK 500 GLU C 39 55.80 38.72 REMARK 500 GLU C 87 -50.66 65.85 REMARK 500 ASN D 27 -7.97 50.61 REMARK 500 ASN D 29 -118.90 -104.74 REMARK 500 SER D 31 -76.50 -89.43 REMARK 500 CYS D 49 115.71 6.35 REMARK 500 ASP D 50 -4.41 79.31 REMARK 500 ASP D 53 -5.83 -57.12 REMARK 500 GLU D 87 -38.30 70.93 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 101 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 102 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 103 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 104 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 106 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 107 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 100 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 101 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 102 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 104 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 105 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 106 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 107 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD C 100 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD C 102 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD C 103 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD C 104 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD C 105 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD C 106 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD C 107 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 1 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 100 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 101 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 102 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 103 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 104 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 105 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 106 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 107 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD D 108
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JTN RELATED DB: PDB REMARK 900 RELATED ID: 3JTO RELATED DB: PDB
DBREF 3JTP A 2 99 UNP P37958 MECA1_BACSU 121 218 DBREF 3JTP B 2 99 UNP P37958 MECA1_BACSU 121 218 DBREF 3JTP C 2 99 UNP P37958 MECA1_BACSU 121 218 DBREF 3JTP D 2 99 UNP P37958 MECA1_BACSU 121 218
SEQADV 3JTP ASP A 50 UNP P37958 ASN 169 ENGINEERED SEQADV 3JTP MET A 63 UNP P37958 LEU 182 ENGINEERED SEQADV 3JTP ASN A 68 UNP P37958 THR 187 ENGINEERED SEQADV 3JTP ASP B 50 UNP P37958 ASN 169 ENGINEERED SEQADV 3JTP MET B 63 UNP P37958 LEU 182 ENGINEERED SEQADV 3JTP ASN B 68 UNP P37958 THR 187 ENGINEERED SEQADV 3JTP ASP C 50 UNP P37958 ASN 169 ENGINEERED SEQADV 3JTP MET C 63 UNP P37958 LEU 182 ENGINEERED SEQADV 3JTP ASN C 68 UNP P37958 THR 187 ENGINEERED SEQADV 3JTP ASP D 50 UNP P37958 ASN 169 ENGINEERED SEQADV 3JTP MET D 63 UNP P37958 LEU 182 ENGINEERED SEQADV 3JTP ASN D 68 UNP P37958 THR 187 ENGINEERED
SEQRES 1 A 98 GLU GLU LYS GLU GLN LYS LEU GLN PHE VAL LEU ARG PHE SEQRES 2 A 98 GLY ASP PHE GLU ASP VAL ILE SER LEU SER LYS LEU ASN SEQRES 3 A 98 VAL ASN GLY SER LYS THR THR LEU TYR SER PHE GLU ASN SEQRES 4 A 98 ARG TYR TYR LEU TYR VAL ASP PHE CYS ASP MET THR ASP SEQRES 5 A 98 GLU GLU VAL GLU ASN GLN LEU SER ILE MET LEU GLU TYR SEQRES 6 A 98 ALA ASN GLU SER SER ILE SER ILE HIS ARG LEU GLU GLU SEQRES 7 A 98 TYR GLY LYS LEU ILE ILE SER GLU HIS ALA LEU GLU THR SEQRES 8 A 98 ILE LYS LYS HIS PHE ALA SER SEQRES 1 B 98 GLU GLU LYS GLU GLN LYS LEU GLN PHE VAL LEU ARG PHE SEQRES 2 B 98 GLY ASP PHE GLU ASP VAL ILE SER LEU SER LYS LEU ASN SEQRES 3 B 98 VAL ASN GLY SER LYS THR THR LEU TYR SER PHE GLU ASN SEQRES 4 B 98 ARG TYR TYR LEU TYR VAL ASP PHE CYS ASP MET THR ASP SEQRES 5 B 98 GLU GLU VAL GLU ASN GLN LEU SER ILE MET LEU GLU TYR SEQRES 6 B 98 ALA ASN GLU SER SER ILE SER ILE HIS ARG LEU GLU GLU SEQRES 7 B 98 TYR GLY LYS LEU ILE ILE SER GLU HIS ALA LEU GLU THR SEQRES 8 B 98 ILE LYS LYS HIS PHE ALA SER SEQRES 1 C 98 GLU GLU LYS GLU GLN LYS LEU GLN PHE VAL LEU ARG PHE SEQRES 2 C 98 GLY ASP PHE GLU ASP VAL ILE SER LEU SER LYS LEU ASN SEQRES 3 C 98 VAL ASN GLY SER LYS THR THR LEU TYR SER PHE GLU ASN SEQRES 4 C 98 ARG TYR TYR LEU TYR VAL ASP PHE CYS ASP MET THR ASP SEQRES 5 C 98 GLU GLU VAL GLU ASN GLN LEU SER ILE MET LEU GLU TYR SEQRES 6 C 98 ALA ASN GLU SER SER ILE SER ILE HIS ARG LEU GLU GLU SEQRES 7 C 98 TYR GLY LYS LEU ILE ILE SER GLU HIS ALA LEU GLU THR SEQRES 8 C 98 ILE LYS LYS HIS PHE ALA SER SEQRES 1 D 98 GLU GLU LYS GLU GLN LYS LEU GLN PHE VAL LEU ARG PHE SEQRES 2 D 98 GLY ASP PHE GLU ASP VAL ILE SER LEU SER LYS LEU ASN SEQRES 3 D 98 VAL ASN GLY SER LYS THR THR LEU TYR SER PHE GLU ASN SEQRES 4 D 98 ARG TYR TYR LEU TYR VAL ASP PHE CYS ASP MET THR ASP SEQRES 5 D 98 GLU GLU VAL GLU ASN GLN LEU SER ILE MET LEU GLU TYR SEQRES 6 D 98 ALA ASN GLU SER SER ILE SER ILE HIS ARG LEU GLU GLU SEQRES 7 D 98 TYR GLY LYS LEU ILE ILE SER GLU HIS ALA LEU GLU THR SEQRES 8 D 98 ILE LYS LYS HIS PHE ALA SER
HET IOD A 100 1 HET IOD A 101 1 HET IOD A 102 1 HET IOD A 103 1 HET IOD A 104 1 HET IOD A 105 1 HET IOD A 106 1 HET IOD A 107 1 HET IOD A 108 1 HET IOD B 100 1 HET IOD B 101 1 HET IOD B 102 1 HET IOD B 103 1 HET IOD B 104 1 HET IOD B 105 1 HET IOD B 106 1 HET IOD B 107 1 HET IOD C 100 1 HET IOD C 101 1 HET IOD C 102 1 HET IOD C 103 1 HET IOD C 104 1 HET IOD C 105 1 HET IOD C 106 1 HET IOD C 107 1 HET IOD D 1 1 HET IOD D 100 1 HET IOD D 101 1 HET IOD D 102 1 HET IOD D 103 1 HET IOD D 104 1 HET IOD D 105 1 HET IOD D 106 1 HET IOD D 107 1 HET IOD D 108 1
HETNAM IOD IODIDE ION
FORMUL 5 IOD 35(I 1-) FORMUL 40 HOH *86(H2 O)
HELIX 1 1 ASP A 16 LEU A 26 1 11 HELIX 2 2 GLU A 54 ALA A 67 1 14 HELIX 3 3 SER A 73 GLY A 81 1 9 HELIX 4 4 HIS A 88 ALA A 98 1 11 HELIX 5 5 ASP B 16 LEU B 26 1 11 HELIX 6 6 THR B 52 LEU B 64 1 13 HELIX 7 7 SER B 73 GLY B 81 1 9 HELIX 8 8 HIS B 88 ALA B 98 1 11 HELIX 9 9 ASP C 16 LYS C 25 1 10 HELIX 10 10 THR C 52 LEU C 64 1 13 HELIX 11 11 SER C 73 GLY C 81 1 9 HELIX 12 12 HIS C 88 ALA C 98 1 11 HELIX 13 13 ASP D 16 LYS D 25 1 10 HELIX 14 14 GLU D 54 LEU D 64 1 11 HELIX 15 15 SER D 73 GLY D 81 1 9 HELIX 16 16 HIS D 88 ALA D 98 1 11
SHEET 1 A 5 ASN A 68 GLU A 69 0 SHEET 2 A 5 GLN A 9 PHE A 14 -1 N ARG A 13 O ASN A 68 SHEET 3 A 5 ARG A 41 ASP A 47 -1 O VAL A 46 N PHE A 10 SHEET 4 A 5 LYS A 32 PHE A 38 -1 N THR A 34 O TYR A 45 SHEET 5 A 5 LYS A 82 ILE A 85 -1 O ILE A 84 N LEU A 35 SHEET 1 B 5 ASN B 68 GLU B 69 0 SHEET 2 B 5 GLN B 9 PHE B 14 -1 N ARG B 13 O ASN B 68 SHEET 3 B 5 ARG B 41 ASP B 47 -1 O TYR B 42 N PHE B 14 SHEET 4 B 5 LYS B 32 PHE B 38 -1 N THR B 34 O TYR B 45 SHEET 5 B 5 LYS B 82 ILE B 85 -1 O ILE B 84 N LEU B 35 SHEET 1 C 5 ASN C 68 GLU C 69 0 SHEET 2 C 5 GLN C 9 PHE C 14 -1 N ARG C 13 O ASN C 68 SHEET 3 C 5 ARG C 41 ASP C 47 -1 O VAL C 46 N PHE C 10 SHEET 4 C 5 LYS C 32 PHE C 38 -1 N LYS C 32 O ASP C 47 SHEET 5 C 5 LYS C 82 ILE C 85 -1 O LYS C 82 N SER C 37 SHEET 1 D 5 ASN D 68 GLU D 69 0 SHEET 2 D 5 GLN D 9 PHE D 14 -1 N ARG D 13 O ASN D 68 SHEET 3 D 5 ARG D 41 ASP D 47 -1 O VAL D 46 N PHE D 10 SHEET 4 D 5 LYS D 32 PHE D 38 -1 N TYR D 36 O TYR D 43 SHEET 5 D 5 LYS D 82 ILE D 85 -1 O LYS D 82 N SER D 37
CISPEP 1 GLY C 30 SER C 31 0 -7.07
SITE 1 AC1 1 GLU A 55 SITE 1 AC2 2 ARG A 13 ARG A 41 SITE 1 AC3 1 ARG A 76 SITE 1 AC4 3 TYR A 80 LYS C 25 HOH C 119 SITE 1 AC5 1 IOD A 107 SITE 1 AC6 1 IOD A 106 SITE 1 AC7 1 ARG B 76 SITE 1 AC8 2 ARG B 13 ARG B 41 SITE 1 AC9 3 LYS B 25 SER B 99 GLU C 39 SITE 1 BC1 1 GLU B 87 SITE 1 BC2 1 GLU B 39 SITE 1 BC3 1 GLU B 79 SITE 1 BC4 1 GLU B 79 SITE 1 BC5 2 ARG C 13 ARG C 41 SITE 1 BC6 1 ASN C 40 SITE 1 BC7 1 ILE B 85 SITE 1 BC8 3 ASN C 29 THR C 33 GLU C 91 SITE 1 BC9 1 SER C 99 SITE 1 CC1 1 IOD C 107 SITE 1 CC2 2 HIS C 88 IOD C 106 SITE 1 CC3 2 GLY D 15 ARG D 41 SITE 1 CC4 1 ILE D 74 SITE 1 CC5 3 LYS A 25 SER A 99 GLU D 39 SITE 1 CC6 2 THR C 52 ASP C 53 SITE 1 CC7 2 ARG C 76 GLU D 79 SITE 1 CC8 1 IOD D 108 SITE 1 CC9 2 HIS D 75 IOD D 106 SITE 1 DC1 4 ILE A 62 SER D 73 ARG D 76 IOD D 105 SITE 1 DC2 2 ASP C 50 MET C 51 SITE 1 DC3 2 SER D 86 IOD D 104
CRYST1 69.518 107.270 109.607 90.00 90.00 90.00 C 2 2 21 32
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014385 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009322 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009124 0.00000