10 20 30 40 50 60 70 80 3ITU - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 28-AUG-09 3ITU
TITLE HPDE2A CATALYTIC DOMAIN COMPLEXED WITH IBMX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 579-919; COMPND 5 SYNONYM: CYCLIC GMP-STIMULATED PHOSPHODIESTERASE, CGS-PDE, COMPND 6 CGSPDE; COMPND 7 EC: 3.1.4.17; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDE2A; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108
KEYWDS ZN-BINDING, ALL-ALPHA-HELICAL, ALTERNATIVE SPLICING, CGMP, KEYWDS 2 HYDROLASE, MEMBRANE, POLYMORPHISM
EXPDTA X-RAY DIFFRACTION
AUTHOR J.PANDIT
REVDAT 2 10-NOV-09 3ITU 1 JRNL REVDAT 1 27-OCT-09 3ITU 0
JRNL AUTH J.PANDIT,M.D.FORMAN,K.F.FENNELL,K.S.DILLMAN, JRNL AUTH 2 F.S.MENNITI JRNL TITL MECHANISM FOR THE ALLOSTERIC REGULATION OF JRNL TITL 2 PHOSPHODIESTERASE 2A DEDUCED FROM THE X-RAY JRNL TITL 3 STRUCTURE OF A NEAR FULL-LENGTH CONSTRUCT. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 18225 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19828435 JRNL DOI 10.1073/PNAS.0907635106
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.8 REMARK 3 NUMBER OF REFLECTIONS : 157107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7854 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4500 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 34.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 252 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10851 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 1777 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.23000 REMARK 3 B33 (A**2) : 0.20000 REMARK 3 B12 (A**2) : 0.03000 REMARK 3 B13 (A**2) : 0.75000 REMARK 3 B23 (A**2) : -0.07000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.935 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11182 ; 0.029 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15094 ; 2.249 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1320 ; 5.501 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 554 ;35.976 ;23.718 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2006 ;14.675 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 68 ;17.766 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1621 ; 0.165 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8456 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 6122 ; 0.239 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 7837 ; 0.317 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1362 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 125 ; 0.196 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 69 ; 0.209 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6861 ; 1.712 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 10692 ; 2.431 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5029 ; 4.108 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4402 ; 5.708 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 3ITU COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-09. REMARK 100 THE RCSB ID CODE IS RCSB054856.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 157174 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.9 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 36.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.20 REMARK 200 R MERGE FOR SHELL (I) : 0.33800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR: 25% PEG 3350, 0.1M TRIS REMARK 280 PH8.5, 0.2M MGCL2 PROTEIN: 25MM HEPES PH 7.5, 25MM NACL, 2MM REMARK 280 TCEP, 10UG/ML E-64, 1UG/ML PEPSTATIN, 1MM IBMX, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: IS A MONOMER
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -3.19594 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -42.98513 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -86.35337 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -53.89810 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -30.29071 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 86.35337
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 575 REMARK 465 SER A 576 REMARK 465 ALA A 577 REMARK 465 MET A 578 REMARK 465 ASP A 917 REMARK 465 GLU A 918 REMARK 465 GLU A 919 REMARK 465 GLY B 575 REMARK 465 SER B 576 REMARK 465 ALA B 577 REMARK 465 MET B 578 REMARK 465 ASP B 579 REMARK 465 SER B 721 REMARK 465 GLU B 722 REMARK 465 GLY B 723 REMARK 465 LEU B 916 REMARK 465 ASP B 917 REMARK 465 GLU B 918 REMARK 465 GLU B 919 REMARK 465 GLY C 575 REMARK 465 SER C 576 REMARK 465 ALA C 577 REMARK 465 MET C 578 REMARK 465 ASP C 579 REMARK 465 ASP C 580 REMARK 465 GLU C 581 REMARK 465 TYR C 582 REMARK 465 THR C 583 REMARK 465 LYS C 584 REMARK 465 LEU C 585 REMARK 465 LEU C 586 REMARK 465 HIS C 587 REMARK 465 ASP C 588 REMARK 465 GLY C 589 REMARK 465 ASP C 917 REMARK 465 GLU C 918 REMARK 465 GLU C 919 REMARK 465 GLY D 575 REMARK 465 SER D 576 REMARK 465 ALA D 577 REMARK 465 MET D 578 REMARK 465 ASP D 579 REMARK 465 ASP D 580 REMARK 465 GLU D 581 REMARK 465 TYR D 582 REMARK 465 THR D 583 REMARK 465 LYS D 584 REMARK 465 LEU D 585 REMARK 465 LEU D 586 REMARK 465 HIS D 587 REMARK 465 ASP D 588 REMARK 465 GLY D 589 REMARK 465 ASP D 917 REMARK 465 GLU D 918 REMARK 465 GLU D 919
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 311 O HOH B 941 1.94 REMARK 500 O HOH C 946 O HOH C 1750 2.03 REMARK 500 O ILE B 745 CE1 HIS B 748 2.05 REMARK 500 NH2 ARG D 762 O HOH D 1738 2.05 REMARK 500 N ASP A 579 O HOH A 1666 2.05 REMARK 500 O HOH B 311 O HOH B 1705 2.06 REMARK 500 O HOH D 1680 O HOH D 1713 2.06 REMARK 500 CE MET A 847 O HOH A 1704 2.08 REMARK 500 O HOH C 304 O HOH C 1714 2.12 REMARK 500 OG SER C 721 O HOH C 1671 2.14 REMARK 500 O HOH D 1019 O HOH D 1709 2.14 REMARK 500 O HOH C 1671 O HOH D 573 2.16 REMARK 500 O HOH C 966 O HOH C 1708 2.16 REMARK 500 OD2 ASP A 579 O HOH A 1678 2.17 REMARK 500 OE1 GLU A 883 NH2 ARG A 887 2.17 REMARK 500 CB CYS C 643 O HOH C 1708 2.18 REMARK 500 O HOH A 83 O HOH A 1085 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 311 O HOH C 924 1545 2.00 REMARK 500 O HOH B 311 O HOH C 1618 1545 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 632 CZ TYR A 632 CE2 0.079 REMARK 500 TYR A 650 CZ TYR A 650 CE2 0.087 REMARK 500 TYR A 871 CD1 TYR A 871 CE1 0.092 REMARK 500 TYR B 655 CD1 TYR B 655 CE1 0.095 REMARK 500 GLU B 682 CB GLU B 682 CG 0.160 REMARK 500 GLU B 682 CG GLU B 682 CD 0.119 REMARK 500 MET B 848 CB MET B 848 CG 0.230 REMARK 500 PHE C 662 CZ PHE C 662 CE2 0.122 REMARK 500 TYR C 827 CZ TYR C 827 CE2 0.084 REMARK 500 TYR C 854 CZ TYR C 854 CE2 0.080 REMARK 500 GLU D 727 CG GLU D 727 CD 0.094 REMARK 500 TYR D 754 CZ TYR D 754 CE2 0.080 REMARK 500 CYS D 807 CA CYS D 807 CB -0.110 REMARK 500 GLU D 857 CG GLU D 857 CD 0.111 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 608 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 LYS A 647 CD - CE - NZ ANGL. DEV. = -14.1 DEGREES REMARK 500 ASP A 683 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ASP A 811 CB - CG - OD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 ARG A 850 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 LEU B 718 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 LEU B 718 CB - CG - CD1 ANGL. DEV. = 10.5 DEGREES REMARK 500 ASP B 808 CB - CG - OD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG C 608 CG - CD - NE ANGL. DEV. = -12.6 DEGREES REMARK 500 ARG C 608 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG C 608 NE - CZ - NH2 ANGL. DEV. = -7.3 DEGREES REMARK 500 MET C 645 CG - SD - CE ANGL. DEV. = -10.8 DEGREES REMARK 500 ASP C 699 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG C 762 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 LEU C 766 CB - CG - CD1 ANGL. DEV. = -11.2 DEGREES REMARK 500 ASP C 808 CB - CG - OD1 ANGL. DEV. = 8.8 DEGREES REMARK 500 ASP C 808 CB - CG - OD2 ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG C 850 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG C 887 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG D 775 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 597 142.84 -172.03 REMARK 500 LYS A 814 -156.69 -103.59 REMARK 500 ASN B 631 -29.28 -34.16 REMARK 500 TYR B 719 70.78 -107.61 REMARK 500 LYS B 814 -155.00 -90.82 REMARK 500 PRO B 908 164.10 -48.17 REMARK 500 ARG C 651 -166.80 -78.78 REMARK 500 TYR C 680 -40.59 -135.81 REMARK 500 LYS C 814 -150.00 -94.08 REMARK 500 LYS D 814 -150.16 -93.33 REMARK 500 ILE D 866 -62.20 -121.29 REMARK 500 PRO D 908 162.58 -48.99 REMARK 500 ASN D 911 19.91 59.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LEU A 675 23.5 L L OUTSIDE RANGE REMARK 500 ILE A 855 24.6 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D1655 DISTANCE = 5.55 ANGSTROMS REMARK 525 HOH B1641 DISTANCE = 7.11 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 660 NE2 REMARK 620 2 HIS A 696 NE2 104.3 REMARK 620 3 ASP A 697 OD2 91.4 89.3 REMARK 620 4 ASP A 808 OD1 91.8 88.7 176.6 REMARK 620 5 HOH A 6 O 87.4 166.7 96.7 84.6 REMARK 620 6 HOH A 922 O 159.4 95.9 84.8 92.6 73.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 920 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 697 OD1 REMARK 620 2 HOH A 922 O 94.2 REMARK 620 3 HOH A 2 O 103.4 89.3 REMARK 620 4 HOH A 3 O 166.5 93.3 87.8 REMARK 620 5 HOH A 4 O 81.4 95.5 173.0 86.8 REMARK 620 6 HOH A 5 O 85.5 174.4 85.3 88.0 89.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 660 NE2 REMARK 620 2 HIS B 696 NE2 102.6 REMARK 620 3 ASP B 697 OD2 90.4 86.7 REMARK 620 4 ASP B 808 OD1 89.3 91.8 178.4 REMARK 620 5 HOH B 7 O 158.3 98.9 88.3 92.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 920 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 697 OD1 REMARK 620 2 HOH B 11 O 91.7 REMARK 620 3 HOH B 9 O 169.8 87.1 REMARK 620 4 HOH B 10 O 86.6 93.7 83.4 REMARK 620 5 HOH B 8 O 102.2 87.7 87.9 171.1 REMARK 620 6 HOH B 7 O 96.4 168.7 86.3 94.6 82.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 3 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 660 NE2 REMARK 620 2 HIS C 696 NE2 104.2 REMARK 620 3 ASP C 697 OD2 91.1 90.0 REMARK 620 4 ASP C 808 OD1 85.9 89.8 176.8 REMARK 620 5 HOH C 13 O 154.9 100.9 89.0 94.2 REMARK 620 6 HOH C 18 O 85.1 168.8 96.1 84.7 69.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 920 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 697 OD1 REMARK 620 2 HOH C 17 O 86.7 REMARK 620 3 HOH C 16 O 84.4 90.1 REMARK 620 4 HOH C 14 O 101.9 85.4 172.0 REMARK 620 5 HOH C 15 O 167.8 85.3 86.3 86.7 REMARK 620 6 HOH C 13 O 96.2 171.9 97.6 86.6 92.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 4 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 660 NE2 REMARK 620 2 HIS D 696 NE2 100.6 REMARK 620 3 ASP D 697 OD2 90.4 91.6 REMARK 620 4 ASP D 808 OD1 90.6 86.6 178.0 REMARK 620 5 HOH D 19 O 160.6 98.4 85.1 94.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 920 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 697 OD1 REMARK 620 2 HOH D 19 O 93.6 REMARK 620 3 HOH D 20 O 101.0 87.7 REMARK 620 4 HOH D 21 O 167.4 94.7 88.8 REMARK 620 5 HOH D 22 O 82.2 96.7 174.4 87.5 REMARK 620 6 HOH D 23 O 87.6 174.0 86.3 85.1 89.3 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 920 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM A 999 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 920 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM B 999 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 3 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 920 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM C 999 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 4 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 920 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IBM D 999
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Z1L RELATED DB: PDB REMARK 900 RELATED ID: 3ITM RELATED DB: PDB
DBREF 3ITU A 579 919 UNP O00408 PDE2A_HUMAN 579 919 DBREF 3ITU B 579 919 UNP O00408 PDE2A_HUMAN 579 919 DBREF 3ITU C 579 919 UNP O00408 PDE2A_HUMAN 579 919 DBREF 3ITU D 579 919 UNP O00408 PDE2A_HUMAN 579 919
SEQADV 3ITU GLY A 575 UNP O00408 EXPRESSION TAG SEQADV 3ITU SER A 576 UNP O00408 EXPRESSION TAG SEQADV 3ITU ALA A 577 UNP O00408 EXPRESSION TAG SEQADV 3ITU MET A 578 UNP O00408 EXPRESSION TAG SEQADV 3ITU GLY B 575 UNP O00408 EXPRESSION TAG SEQADV 3ITU SER B 576 UNP O00408 EXPRESSION TAG SEQADV 3ITU ALA B 577 UNP O00408 EXPRESSION TAG SEQADV 3ITU MET B 578 UNP O00408 EXPRESSION TAG SEQADV 3ITU GLY C 575 UNP O00408 EXPRESSION TAG SEQADV 3ITU SER C 576 UNP O00408 EXPRESSION TAG SEQADV 3ITU ALA C 577 UNP O00408 EXPRESSION TAG SEQADV 3ITU MET C 578 UNP O00408 EXPRESSION TAG SEQADV 3ITU GLY D 575 UNP O00408 EXPRESSION TAG SEQADV 3ITU SER D 576 UNP O00408 EXPRESSION TAG SEQADV 3ITU ALA D 577 UNP O00408 EXPRESSION TAG SEQADV 3ITU MET D 578 UNP O00408 EXPRESSION TAG
SEQRES 1 A 345 GLY SER ALA MET ASP ASP GLU TYR THR LYS LEU LEU HIS SEQRES 2 A 345 ASP GLY ILE GLN PRO VAL ALA ALA ILE ASP SER ASN PHE SEQRES 3 A 345 ALA SER PHE THR TYR THR PRO ARG SER LEU PRO GLU ASP SEQRES 4 A 345 ASP THR SER MET ALA ILE LEU SER MET LEU GLN ASP MET SEQRES 5 A 345 ASN PHE ILE ASN ASN TYR LYS ILE ASP CYS PRO THR LEU SEQRES 6 A 345 ALA ARG PHE CYS LEU MET VAL LYS LYS GLY TYR ARG ASP SEQRES 7 A 345 PRO PRO TYR HIS ASN TRP MET HIS ALA PHE SER VAL SER SEQRES 8 A 345 HIS PHE CYS TYR LEU LEU TYR LYS ASN LEU GLU LEU THR SEQRES 9 A 345 ASN TYR LEU GLU ASP ILE GLU ILE PHE ALA LEU PHE ILE SEQRES 10 A 345 SER CYS MET CYS HIS ASP LEU ASP HIS ARG GLY THR ASN SEQRES 11 A 345 ASN SER PHE GLN VAL ALA SER LYS SER VAL LEU ALA ALA SEQRES 12 A 345 LEU TYR SER SER GLU GLY SER VAL MET GLU ARG HIS HIS SEQRES 13 A 345 PHE ALA GLN ALA ILE ALA ILE LEU ASN THR HIS GLY CYS SEQRES 14 A 345 ASN ILE PHE ASP HIS PHE SER ARG LYS ASP TYR GLN ARG SEQRES 15 A 345 MET LEU ASP LEU MET ARG ASP ILE ILE LEU ALA THR ASP SEQRES 16 A 345 LEU ALA HIS HIS LEU ARG ILE PHE LYS ASP LEU GLN LYS SEQRES 17 A 345 MET ALA GLU VAL GLY TYR ASP ARG ASN ASN LYS GLN HIS SEQRES 18 A 345 HIS ARG LEU LEU LEU CYS LEU LEU MET THR SER CYS ASP SEQRES 19 A 345 LEU SER ASP GLN THR LYS GLY TRP LYS THR THR ARG LYS SEQRES 20 A 345 ILE ALA GLU LEU ILE TYR LYS GLU PHE PHE SER GLN GLY SEQRES 21 A 345 ASP LEU GLU LYS ALA MET GLY ASN ARG PRO MET GLU MET SEQRES 22 A 345 MET ASP ARG GLU LYS ALA TYR ILE PRO GLU LEU GLN ILE SEQRES 23 A 345 SER PHE MET GLU HIS ILE ALA MET PRO ILE TYR LYS LEU SEQRES 24 A 345 LEU GLN ASP LEU PHE PRO LYS ALA ALA GLU LEU TYR GLU SEQRES 25 A 345 ARG VAL ALA SER ASN ARG GLU HIS TRP THR LYS VAL SER SEQRES 26 A 345 HIS LYS PHE THR ILE ARG GLY LEU PRO SER ASN ASN SER SEQRES 27 A 345 LEU ASP PHE LEU ASP GLU GLU SEQRES 1 B 345 GLY SER ALA MET ASP ASP GLU TYR THR LYS LEU LEU HIS SEQRES 2 B 345 ASP GLY ILE GLN PRO VAL ALA ALA ILE ASP SER ASN PHE SEQRES 3 B 345 ALA SER PHE THR TYR THR PRO ARG SER LEU PRO GLU ASP SEQRES 4 B 345 ASP THR SER MET ALA ILE LEU SER MET LEU GLN ASP MET SEQRES 5 B 345 ASN PHE ILE ASN ASN TYR LYS ILE ASP CYS PRO THR LEU SEQRES 6 B 345 ALA ARG PHE CYS LEU MET VAL LYS LYS GLY TYR ARG ASP SEQRES 7 B 345 PRO PRO TYR HIS ASN TRP MET HIS ALA PHE SER VAL SER SEQRES 8 B 345 HIS PHE CYS TYR LEU LEU TYR LYS ASN LEU GLU LEU THR SEQRES 9 B 345 ASN TYR LEU GLU ASP ILE GLU ILE PHE ALA LEU PHE ILE SEQRES 10 B 345 SER CYS MET CYS HIS ASP LEU ASP HIS ARG GLY THR ASN SEQRES 11 B 345 ASN SER PHE GLN VAL ALA SER LYS SER VAL LEU ALA ALA SEQRES 12 B 345 LEU TYR SER SER GLU GLY SER VAL MET GLU ARG HIS HIS SEQRES 13 B 345 PHE ALA GLN ALA ILE ALA ILE LEU ASN THR HIS GLY CYS SEQRES 14 B 345 ASN ILE PHE ASP HIS PHE SER ARG LYS ASP TYR GLN ARG SEQRES 15 B 345 MET LEU ASP LEU MET ARG ASP ILE ILE LEU ALA THR ASP SEQRES 16 B 345 LEU ALA HIS HIS LEU ARG ILE PHE LYS ASP LEU GLN LYS SEQRES 17 B 345 MET ALA GLU VAL GLY TYR ASP ARG ASN ASN LYS GLN HIS SEQRES 18 B 345 HIS ARG LEU LEU LEU CYS LEU LEU MET THR SER CYS ASP SEQRES 19 B 345 LEU SER ASP GLN THR LYS GLY TRP LYS THR THR ARG LYS SEQRES 20 B 345 ILE ALA GLU LEU ILE TYR LYS GLU PHE PHE SER GLN GLY SEQRES 21 B 345 ASP LEU GLU LYS ALA MET GLY ASN ARG PRO MET GLU MET SEQRES 22 B 345 MET ASP ARG GLU LYS ALA TYR ILE PRO GLU LEU GLN ILE SEQRES 23 B 345 SER PHE MET GLU HIS ILE ALA MET PRO ILE TYR LYS LEU SEQRES 24 B 345 LEU GLN ASP LEU PHE PRO LYS ALA ALA GLU LEU TYR GLU SEQRES 25 B 345 ARG VAL ALA SER ASN ARG GLU HIS TRP THR LYS VAL SER SEQRES 26 B 345 HIS LYS PHE THR ILE ARG GLY LEU PRO SER ASN ASN SER SEQRES 27 B 345 LEU ASP PHE LEU ASP GLU GLU SEQRES 1 C 345 GLY SER ALA MET ASP ASP GLU TYR THR LYS LEU LEU HIS SEQRES 2 C 345 ASP GLY ILE GLN PRO VAL ALA ALA ILE ASP SER ASN PHE SEQRES 3 C 345 ALA SER PHE THR TYR THR PRO ARG SER LEU PRO GLU ASP SEQRES 4 C 345 ASP THR SER MET ALA ILE LEU SER MET LEU GLN ASP MET SEQRES 5 C 345 ASN PHE ILE ASN ASN TYR LYS ILE ASP CYS PRO THR LEU SEQRES 6 C 345 ALA ARG PHE CYS LEU MET VAL LYS LYS GLY TYR ARG ASP SEQRES 7 C 345 PRO PRO TYR HIS ASN TRP MET HIS ALA PHE SER VAL SER SEQRES 8 C 345 HIS PHE CYS TYR LEU LEU TYR LYS ASN LEU GLU LEU THR SEQRES 9 C 345 ASN TYR LEU GLU ASP ILE GLU ILE PHE ALA LEU PHE ILE SEQRES 10 C 345 SER CYS MET CYS HIS ASP LEU ASP HIS ARG GLY THR ASN SEQRES 11 C 345 ASN SER PHE GLN VAL ALA SER LYS SER VAL LEU ALA ALA SEQRES 12 C 345 LEU TYR SER SER GLU GLY SER VAL MET GLU ARG HIS HIS SEQRES 13 C 345 PHE ALA GLN ALA ILE ALA ILE LEU ASN THR HIS GLY CYS SEQRES 14 C 345 ASN ILE PHE ASP HIS PHE SER ARG LYS ASP TYR GLN ARG SEQRES 15 C 345 MET LEU ASP LEU MET ARG ASP ILE ILE LEU ALA THR ASP SEQRES 16 C 345 LEU ALA HIS HIS LEU ARG ILE PHE LYS ASP LEU GLN LYS SEQRES 17 C 345 MET ALA GLU VAL GLY TYR ASP ARG ASN ASN LYS GLN HIS SEQRES 18 C 345 HIS ARG LEU LEU LEU CYS LEU LEU MET THR SER CYS ASP SEQRES 19 C 345 LEU SER ASP GLN THR LYS GLY TRP LYS THR THR ARG LYS SEQRES 20 C 345 ILE ALA GLU LEU ILE TYR LYS GLU PHE PHE SER GLN GLY SEQRES 21 C 345 ASP LEU GLU LYS ALA MET GLY ASN ARG PRO MET GLU MET SEQRES 22 C 345 MET ASP ARG GLU LYS ALA TYR ILE PRO GLU LEU GLN ILE SEQRES 23 C 345 SER PHE MET GLU HIS ILE ALA MET PRO ILE TYR LYS LEU SEQRES 24 C 345 LEU GLN ASP LEU PHE PRO LYS ALA ALA GLU LEU TYR GLU SEQRES 25 C 345 ARG VAL ALA SER ASN ARG GLU HIS TRP THR LYS VAL SER SEQRES 26 C 345 HIS LYS PHE THR ILE ARG GLY LEU PRO SER ASN ASN SER SEQRES 27 C 345 LEU ASP PHE LEU ASP GLU GLU SEQRES 1 D 345 GLY SER ALA MET ASP ASP GLU TYR THR LYS LEU LEU HIS SEQRES 2 D 345 ASP GLY ILE GLN PRO VAL ALA ALA ILE ASP SER ASN PHE SEQRES 3 D 345 ALA SER PHE THR TYR THR PRO ARG SER LEU PRO GLU ASP SEQRES 4 D 345 ASP THR SER MET ALA ILE LEU SER MET LEU GLN ASP MET SEQRES 5 D 345 ASN PHE ILE ASN ASN TYR LYS ILE ASP CYS PRO THR LEU SEQRES 6 D 345 ALA ARG PHE CYS LEU MET VAL LYS LYS GLY TYR ARG ASP SEQRES 7 D 345 PRO PRO TYR HIS ASN TRP MET HIS ALA PHE SER VAL SER SEQRES 8 D 345 HIS PHE CYS TYR LEU LEU TYR LYS ASN LEU GLU LEU THR SEQRES 9 D 345 ASN TYR LEU GLU ASP ILE GLU ILE PHE ALA LEU PHE ILE SEQRES 10 D 345 SER CYS MET CYS HIS ASP LEU ASP HIS ARG GLY THR ASN SEQRES 11 D 345 ASN SER PHE GLN VAL ALA SER LYS SER VAL LEU ALA ALA SEQRES 12 D 345 LEU TYR SER SER GLU GLY SER VAL MET GLU ARG HIS HIS SEQRES 13 D 345 PHE ALA GLN ALA ILE ALA ILE LEU ASN THR HIS GLY CYS SEQRES 14 D 345 ASN ILE PHE ASP HIS PHE SER ARG LYS ASP TYR GLN ARG SEQRES 15 D 345 MET LEU ASP LEU MET ARG ASP ILE ILE LEU ALA THR ASP SEQRES 16 D 345 LEU ALA HIS HIS LEU ARG ILE PHE LYS ASP LEU GLN LYS SEQRES 17 D 345 MET ALA GLU VAL GLY TYR ASP ARG ASN ASN LYS GLN HIS SEQRES 18 D 345 HIS ARG LEU LEU LEU CYS LEU LEU MET THR SER CYS ASP SEQRES 19 D 345 LEU SER ASP GLN THR LYS GLY TRP LYS THR THR ARG LYS SEQRES 20 D 345 ILE ALA GLU LEU ILE TYR LYS GLU PHE PHE SER GLN GLY SEQRES 21 D 345 ASP LEU GLU LYS ALA MET GLY ASN ARG PRO MET GLU MET SEQRES 22 D 345 MET ASP ARG GLU LYS ALA TYR ILE PRO GLU LEU GLN ILE SEQRES 23 D 345 SER PHE MET GLU HIS ILE ALA MET PRO ILE TYR LYS LEU SEQRES 24 D 345 LEU GLN ASP LEU PHE PRO LYS ALA ALA GLU LEU TYR GLU SEQRES 25 D 345 ARG VAL ALA SER ASN ARG GLU HIS TRP THR LYS VAL SER SEQRES 26 D 345 HIS LYS PHE THR ILE ARG GLY LEU PRO SER ASN ASN SER SEQRES 27 D 345 LEU ASP PHE LEU ASP GLU GLU
HET ZN A 1 1 HET MG A 920 1 HET IBM A 999 16 HET ZN B 2 1 HET MG B 920 1 HET IBM B 999 16 HET ZN C 3 1 HET MG C 920 1 HET IBM C 999 16 HET ZN D 4 1 HET MG D 920 1 HET IBM D 999 16
HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM IBM 3-ISOBUTYL-1-METHYLXANTHINE
FORMUL 5 ZN 4(ZN 2+) FORMUL 6 MG 4(MG 2+) FORMUL 7 IBM 4(C10 H14 N4 O2) FORMUL 17 HOH *1777(H2 O)
HELIX 1 1 ASP A 579 ASP A 588 1 10 HELIX 2 2 PRO A 592 ILE A 596 5 5 HELIX 3 3 THR A 606 LEU A 610 5 5 HELIX 4 4 PRO A 611 ASP A 613 5 3 HELIX 5 5 ASP A 614 MET A 626 1 13 HELIX 6 6 ASN A 627 TYR A 632 1 6 HELIX 7 7 ASP A 635 GLY A 649 1 15 HELIX 8 8 ASN A 657 GLU A 676 1 20 HELIX 9 9 LEU A 677 TYR A 680 5 4 HELIX 10 10 GLU A 682 HIS A 696 1 15 HELIX 11 11 ASN A 704 SER A 711 1 8 HELIX 12 12 SER A 713 SER A 720 1 8 HELIX 13 13 SER A 724 ASN A 739 1 16 HELIX 14 14 SER A 750 ALA A 767 1 18 HELIX 15 15 ASP A 769 GLY A 787 1 19 HELIX 16 16 ASN A 792 LEU A 809 1 18 HELIX 17 17 SER A 810 LYS A 814 5 5 HELIX 18 18 GLY A 815 MET A 840 1 26 HELIX 19 19 MET A 845 ASP A 849 5 5 HELIX 20 20 TYR A 854 ILE A 866 1 13 HELIX 21 21 ILE A 866 PHE A 878 1 13 HELIX 22 22 ALA A 881 SER A 899 1 19 HELIX 23 23 HIS A 900 THR A 903 5 4 HELIX 24 24 ASP B 580 ASP B 588 1 9 HELIX 25 25 PRO B 592 ASP B 597 1 6 HELIX 26 26 THR B 606 LEU B 610 5 5 HELIX 27 27 PRO B 611 ASP B 613 5 3 HELIX 28 28 ASP B 614 MET B 626 1 13 HELIX 29 29 ASN B 627 TYR B 632 1 6 HELIX 30 30 ASP B 635 GLY B 649 1 15 HELIX 31 31 ASN B 657 GLU B 676 1 20 HELIX 32 32 LEU B 677 TYR B 680 5 4 HELIX 33 33 GLU B 682 HIS B 696 1 15 HELIX 34 34 ASN B 704 SER B 711 1 8 HELIX 35 35 SER B 713 TYR B 719 1 7 HELIX 36 36 SER B 724 ASN B 739 1 16 HELIX 37 37 SER B 750 ALA B 767 1 18 HELIX 38 38 ASP B 769 GLY B 787 1 19 HELIX 39 39 ASN B 792 LEU B 809 1 18 HELIX 40 40 SER B 810 LYS B 814 5 5 HELIX 41 41 GLY B 815 GLY B 841 1 27 HELIX 42 42 MET B 845 ASP B 849 5 5 HELIX 43 43 TYR B 854 ILE B 866 1 13 HELIX 44 44 ILE B 866 PHE B 878 1 13 HELIX 45 45 ALA B 881 SER B 899 1 19 HELIX 46 46 HIS B 900 THR B 903 5 4 HELIX 47 47 PRO C 592 ASP C 597 1 6 HELIX 48 48 THR C 606 LEU C 610 5 5 HELIX 49 49 PRO C 611 ASP C 613 5 3 HELIX 50 50 ASP C 614 MET C 626 1 13 HELIX 51 51 ASN C 627 LYS C 633 1 7 HELIX 52 52 ASP C 635 GLY C 649 1 15 HELIX 53 53 ASN C 657 GLU C 676 1 20 HELIX 54 54 LEU C 677 TYR C 680 5 4 HELIX 55 55 GLU C 682 HIS C 696 1 15 HELIX 56 56 ASN C 704 SER C 711 1 8 HELIX 57 57 SER C 713 SER C 720 1 8 HELIX 58 58 SER C 724 ASN C 739 1 16 HELIX 59 59 SER C 750 ALA C 767 1 18 HELIX 60 60 ASP C 769 GLY C 787 1 19 HELIX 61 61 ASN C 792 LEU C 809 1 18 HELIX 62 62 SER C 810 LYS C 814 5 5 HELIX 63 63 GLY C 815 MET C 840 1 26 HELIX 64 64 MET C 845 ASP C 849 5 5 HELIX 65 65 TYR C 854 ILE C 866 1 13 HELIX 66 66 ILE C 866 PHE C 878 1 13 HELIX 67 67 ALA C 881 SER C 899 1 19 HELIX 68 68 HIS C 900 THR C 903 5 4 HELIX 69 69 PRO D 592 ASP D 597 1 6 HELIX 70 70 THR D 606 LEU D 610 5 5 HELIX 71 71 PRO D 611 ASP D 613 5 3 HELIX 72 72 ASP D 614 MET D 626 1 13 HELIX 73 73 ASN D 627 TYR D 632 1 6 HELIX 74 74 ASP D 635 GLY D 649 1 15 HELIX 75 75 ASN D 657 LEU D 675 1 19 HELIX 76 76 GLU D 676 LEU D 681 1 6 HELIX 77 77 GLU D 682 HIS D 696 1 15 HELIX 78 78 ASN D 704 LYS D 712 1 9 HELIX 79 79 SER D 713 SER D 720 1 8 HELIX 80 80 SER D 721 GLY D 723 5 3 HELIX 81 81 SER D 724 ASN D 739 1 16 HELIX 82 82 SER D 750 ALA D 767 1 18 HELIX 83 83 ASP D 769 GLY D 787 1 19 HELIX 84 84 ASN D 792 LEU D 809 1 18 HELIX 85 85 SER D 810 LYS D 814 5 5 HELIX 86 86 GLY D 815 MET D 840 1 26 HELIX 87 87 MET D 845 ASP D 849 5 5 HELIX 88 88 TYR D 854 ILE D 866 1 13 HELIX 89 89 ILE D 866 PHE D 878 1 13 HELIX 90 90 ALA D 881 SER D 899 1 19 HELIX 91 91 HIS D 900 THR D 903 5 4
LINK NE2 HIS A 660 ZN ZN A 1 1555 1555 2.07 LINK NE2 HIS A 696 ZN ZN A 1 1555 1555 2.12 LINK OD1 ASP A 697 MG MG A 920 1555 1555 2.05 LINK OD2 ASP A 697 ZN ZN A 1 1555 1555 2.14 LINK OD1 ASP A 808 ZN ZN A 1 1555 1555 2.13 LINK NE2 HIS B 660 ZN ZN B 2 1555 1555 2.18 LINK NE2 HIS B 696 ZN ZN B 2 1555 1555 2.09 LINK OD1 ASP B 697 MG MG B 920 1555 1555 2.03 LINK OD2 ASP B 697 ZN ZN B 2 1555 1555 2.09 LINK OD1 ASP B 808 ZN ZN B 2 1555 1555 2.02 LINK NE2 HIS C 660 ZN ZN C 3 1555 1555 2.17 LINK NE2 HIS C 696 ZN ZN C 3 1555 1555 2.07 LINK OD1 ASP C 697 MG MG C 920 1555 1555 2.09 LINK OD2 ASP C 697 ZN ZN C 3 1555 1555 2.10 LINK OD1 ASP C 808 ZN ZN C 3 1555 1555 2.03 LINK NE2 HIS D 660 ZN ZN D 4 1555 1555 2.09 LINK NE2 HIS D 696 ZN ZN D 4 1555 1555 2.13 LINK OD1 ASP D 697 MG MG D 920 1555 1555 2.08 LINK OD2 ASP D 697 ZN ZN D 4 1555 1555 2.04 LINK OD1 ASP D 808 ZN ZN D 4 1555 1555 2.11 LINK ZN ZN A 1 O HOH A 6 1555 1555 2.37 LINK ZN ZN A 1 O HOH A 922 1555 1555 2.32 LINK MG MG A 920 O HOH A 922 1555 1555 2.02 LINK MG MG A 920 O HOH A 2 1555 1555 2.11 LINK MG MG A 920 O HOH A 3 1555 1555 2.13 LINK MG MG A 920 O HOH A 4 1555 1555 2.08 LINK MG MG A 920 O HOH A 5 1555 1555 2.18 LINK ZN ZN B 2 O HOH B 7 1555 1555 2.26 LINK MG MG B 920 O HOH B 11 1555 1555 2.07 LINK MG MG B 920 O HOH B 9 1555 1555 2.02 LINK MG MG B 920 O HOH B 10 1555 1555 2.05 LINK MG MG B 920 O HOH B 8 1555 1555 2.14 LINK MG MG B 920 O HOH B 7 1555 1555 2.13 LINK ZN ZN C 3 O HOH C 13 1555 1555 2.24 LINK ZN ZN C 3 O HOH C 18 1555 1555 2.35 LINK MG MG C 920 O HOH C 17 1555 1555 2.14 LINK MG MG C 920 O HOH C 16 1555 1555 2.07 LINK MG MG C 920 O HOH C 14 1555 1555 2.05 LINK MG MG C 920 O HOH C 15 1555 1555 2.05 LINK MG MG C 920 O HOH C 13 1555 1555 2.11 LINK ZN ZN D 4 O HOH D 19 1555 1555 2.22 LINK MG MG D 920 O HOH D 19 1555 1555 2.00 LINK MG MG D 920 O HOH D 20 1555 1555 2.08 LINK MG MG D 920 O HOH D 21 1555 1555 2.12 LINK MG MG D 920 O HOH D 22 1555 1555 2.14 LINK MG MG D 920 O HOH D 23 1555 1555 2.24
SITE 1 AC1 6 HOH A 6 HIS A 660 HIS A 696 ASP A 697 SITE 2 AC1 6 ASP A 808 HOH A 922 SITE 1 AC2 6 HOH A 2 HOH A 3 HOH A 4 HOH A 5 SITE 2 AC2 6 ASP A 697 HOH A 922 SITE 1 AC3 9 HOH A 42 TYR A 655 LEU A 809 GLN A 812 SITE 2 AC3 9 ILE A 826 GLN A 859 PHE A 862 HOH A1271 SITE 3 AC3 9 HOH A1704 SITE 1 AC4 6 HOH B 7 HOH B 12 HIS B 660 HIS B 696 SITE 2 AC4 6 ASP B 697 ASP B 808 SITE 1 AC5 6 HOH B 7 HOH B 8 HOH B 9 HOH B 10 SITE 2 AC5 6 HOH B 11 ASP B 697 SITE 1 AC6 7 HOH B 60 LEU B 809 GLN B 812 ILE B 826 SITE 2 AC6 7 GLN B 859 PHE B 862 HOH B1367 SITE 1 AC7 6 HOH C 13 HOH C 18 HIS C 660 HIS C 696 SITE 2 AC7 6 ASP C 697 ASP C 808 SITE 1 AC8 6 HOH C 13 HOH C 14 HOH C 15 HOH C 16 SITE 2 AC8 6 HOH C 17 ASP C 697 SITE 1 AC9 8 HOH C 31 HIS C 656 LEU C 809 GLN C 812 SITE 2 AC9 8 ILE C 826 GLN C 859 PHE C 862 HOH C1720 SITE 1 BC1 6 HOH D 19 HOH D 24 HIS D 660 HIS D 696 SITE 2 BC1 6 ASP D 697 ASP D 808 SITE 1 BC2 6 HOH D 19 HOH D 20 HOH D 21 HOH D 22 SITE 2 BC2 6 HOH D 23 ASP D 697 SITE 1 BC3 7 HOH D 113 LEU D 809 GLN D 812 ILE D 826 SITE 2 BC3 7 GLN D 859 PHE D 862 HOH D1032
CRYST1 55.815 73.287 91.532 109.30 88.80 89.00 P 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017916 -0.000311 -0.000508 0.00000
SCALE2 0.000000 0.013647 0.004786 0.00000
SCALE3 0.000000 0.000000 0.011580 0.00000