10 20 30 40 50 60 70 80 3HXA - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LYASE 20-JUN-09 3HXA
TITLE CRYSTAL STRUCTURE OF DCOH1THR51SER
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 SYNONYM: PHS, 4-ALPHA-HYDROXY-TETRAHYDROPTERIN DEHYDRATASE, COMPND 5 PHENYLALANINE HYDROXYLASE-STIMULATING PROTEIN, PTERIN CARBINOLAMINE COMPND 6 DEHYDRATASE, PCD, DIMERIZATION COFACTOR OF HEPATOCYTE NUCLEAR FACTOR COMPND 7 1-ALPHA, DIMERIZATION COFACTOR OF HNF1, DCOH; COMPND 8 EC: 4.2.1.96; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: DCOH, PCBD, PCBD/DCOH, PCBD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX2T
KEYWDS ALPHA AND BETA STRUCTURE, LYASE, NUCLEUS, TETRAHYDROBIOPTERIN KEYWDS 2 BIOSYNTHESIS
EXPDTA X-RAY DIFFRACTION
AUTHOR H.Y.RHO,C.N.JONES,R.B.ROSE
REVDAT 1 25-AUG-10 3HXA 0
JRNL AUTH H.Y.RHO,C.N.JONES,R.B.ROSE JRNL TITL CRYSTAL STRUCTURE OF DCOH1THR51SER JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.A.ENDRIZZI,J.D.CRONK,W.WANG,G.R.CRABTREE,T.ALBER REMARK 1 TITL CRYSTAL STRUCTURE OF DCOH, A BIFUNCTIONAL, PROTEIN-BINDING REMARK 1 TITL 2 TRANSCRIPTIONAL COACTIVATOR REMARK 1 REF SCIENCE V. 268 556 1995 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 7725101 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.B.ROSE,K.E.PULLEN,J.H.BAYLE,G.R.CRABTREE,T.ALBER REMARK 1 TITL BIOCHEMICAL AND STRUCTURAL BASIS FOR PARTIALLY REDUNDANT REMARK 1 TITL 2 ENZYMATIC AND TRANSCRIPTIONAL FUNCTIONS OF DCOH AND DCOH2 REMARK 1 REF BIOCHEMISTRY V. 43 7345 2004 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 15182178
REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 111045 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 5521 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6305 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 524 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.29000 REMARK 3 B22 (A**2) : -2.29000 REMARK 3 B33 (A**2) : 4.58100 REMARK 3 B12 (A**2) : -0.34200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.226 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.912 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.876 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.808 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 57.22 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 5 : GOL.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR:PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR:DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : CNS_TOPPAR:WATER.TOP REMARK 3 TOPOLOGY FILE 4 : CNS_TOPPAR:ION.TOP REMARK 3 TOPOLOGY FILE 5 : GOL.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3HXA COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUN-09. REMARK 100 THE RCSB ID CODE IS RCSB053695.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 111375 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 81.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : 0.11800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 2.9580 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.92100 REMARK 200 R SYM FOR SHELL (I) : 0.92100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, AMMONIUM SULFATE, PEG 200, REMARK 280 GLYCEROL, PH 7.5, HANGING DROP, TEMPERATURE 291K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 129.08600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.54300 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 64.54300 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 129.08600 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 3 REMARK 465 LYS A 4 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 3 REMARK 465 LYS B 4 REMARK 465 THR B 104 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLY C 3 REMARK 465 LYS C 4 REMARK 465 ALA C 5 REMARK 465 THR C 104 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 GLY D 3 REMARK 465 THR D 104 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 GLY E 3 REMARK 465 THR E 104 REMARK 465 MET F 1 REMARK 465 ALA F 2 REMARK 465 GLY F 3 REMARK 465 THR F 104 REMARK 465 MET G 1 REMARK 465 ALA G 2 REMARK 465 GLY G 3 REMARK 465 LYS G 4 REMARK 465 THR G 104 REMARK 465 MET H 1 REMARK 465 ALA H 2 REMARK 465 GLY H 3 REMARK 465 THR H 104
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 GLN A 37 CG CD OE1 NE2 REMARK 470 HIS A 39 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 HIS A 80 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 104 OG1 CG2 REMARK 470 HIS B 6 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 GLN B 15 CG CD OE1 NE2 REMARK 470 GLU B 29 CG CD OE1 OE2 REMARK 470 HIS B 80 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 87 CG CD OE1 OE2 REMARK 470 GLU C 11 CG CD OE1 OE2 REMARK 470 GLN C 15 CG CD OE1 NE2 REMARK 470 ARG C 21 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 29 CG CD OE1 OE2 REMARK 470 GLN C 37 CG CD OE1 NE2 REMARK 470 HIS C 39 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 72 CG CD CE NZ REMARK 470 HIS C 80 CG ND1 CD2 CE1 NE2 REMARK 470 GLU C 81 CG CD OE1 OE2 REMARK 470 GLU C 87 CG CD OE1 OE2 REMARK 470 GLN C 98 CG CD OE1 NE2 REMARK 470 LYS D 4 CG CD CE NZ REMARK 470 HIS D 6 CG ND1 CD2 CE1 NE2 REMARK 470 GLU D 11 CG CD OE1 OE2 REMARK 470 GLN D 15 CG CD OE1 NE2 REMARK 470 HIS D 80 CG ND1 CD2 CE1 NE2 REMARK 470 GLU D 87 CG CD OE1 OE2 REMARK 470 LYS E 4 CG CD CE NZ REMARK 470 GLU E 11 CG CD OE1 OE2 REMARK 470 GLN E 15 CG CD OE1 NE2 REMARK 470 GLU E 29 CG CD OE1 OE2 REMARK 470 LYS E 41 CG CD CE NZ REMARK 470 HIS E 80 CG ND1 CD2 CE1 NE2 REMARK 470 GLU E 87 CG CD OE1 OE2 REMARK 470 LYS F 4 CG CD CE NZ REMARK 470 HIS F 6 CG ND1 CD2 CE1 NE2 REMARK 470 GLU F 11 CG CD OE1 OE2 REMARK 470 GLU F 29 CG CD OE1 OE2 REMARK 470 HIS F 39 CG ND1 CD2 CE1 NE2 REMARK 470 LYS F 41 CG CD CE NZ REMARK 470 LYS F 72 CG CD CE NZ REMARK 470 GLU F 87 CG CD OE1 OE2 REMARK 470 SER F 102 OG REMARK 470 GLU G 11 CG CD OE1 OE2 REMARK 470 LYS H 4 CG CD CE NZ REMARK 470 HIS H 6 CG ND1 CD2 CE1 NE2 REMARK 470 GLU H 11 CG CD OE1 OE2 REMARK 470 GLU H 29 CG CD OE1 OE2 REMARK 470 LYS H 41 CG CD CE NZ REMARK 470 GLU H 81 CG CD OE1 OE2 REMARK 470 GLU H 87 CG CD OE1 OE2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 70 -107.28 57.04 REMARK 500 MET A 103 47.91 -101.31 REMARK 500 GLU B 29 -71.81 -65.90 REMARK 500 TYR B 70 -113.84 53.50 REMARK 500 TYR C 70 -110.43 52.15 REMARK 500 TYR D 70 -111.34 54.26 REMARK 500 TYR E 70 -104.25 52.76 REMARK 500 TYR F 70 -107.86 52.48 REMARK 500 TYR G 70 -107.50 54.13 REMARK 500 TYR H 70 -109.20 53.12 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL E 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL F 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 G 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL G 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL G 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL G 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 H 105
DBREF 3HXA A 1 104 UNP P61459 PHS_RAT 1 104 DBREF 3HXA B 1 104 UNP P61459 PHS_RAT 1 104 DBREF 3HXA C 1 104 UNP P61459 PHS_RAT 1 104 DBREF 3HXA D 1 104 UNP P61459 PHS_RAT 1 104 DBREF 3HXA E 1 104 UNP P61459 PHS_RAT 1 104 DBREF 3HXA F 1 104 UNP P61459 PHS_RAT 1 104 DBREF 3HXA G 1 104 UNP P61459 PHS_RAT 1 104 DBREF 3HXA H 1 104 UNP P61459 PHS_RAT 1 104
SEQADV 3HXA SER A 51 UNP P61459 THR 51 ENGINEERED SEQADV 3HXA SER B 51 UNP P61459 THR 51 ENGINEERED SEQADV 3HXA SER C 51 UNP P61459 THR 51 ENGINEERED SEQADV 3HXA SER D 51 UNP P61459 THR 51 ENGINEERED SEQADV 3HXA SER E 51 UNP P61459 THR 51 ENGINEERED SEQADV 3HXA SER F 51 UNP P61459 THR 51 ENGINEERED SEQADV 3HXA SER G 51 UNP P61459 THR 51 ENGINEERED SEQADV 3HXA SER H 51 UNP P61459 THR 51 ENGINEERED
SEQRES 1 A 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 A 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 A 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 A 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 A 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 A 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 A 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 A 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR SEQRES 1 B 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 B 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 B 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 B 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 B 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 B 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 B 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 B 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR SEQRES 1 C 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 C 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 C 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 C 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 C 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 C 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 C 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 C 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR SEQRES 1 D 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 D 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 D 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 D 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 D 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 D 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 D 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 D 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR SEQRES 1 E 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 E 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 E 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 E 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 E 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 E 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 E 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 E 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR SEQRES 1 F 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 F 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 F 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 F 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 F 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 F 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 F 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 F 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR SEQRES 1 G 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 G 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 G 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 G 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 G 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 G 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 G 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 G 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR SEQRES 1 H 104 MET ALA GLY LYS ALA HIS ARG LEU SER ALA GLU GLU ARG SEQRES 2 H 104 ASP GLN LEU LEU PRO ASN LEU ARG ALA VAL GLY TRP ASN SEQRES 3 H 104 GLU LEU GLU GLY ARG ASP ALA ILE PHE LYS GLN PHE HIS SEQRES 4 H 104 PHE LYS ASP PHE ASN ARG ALA PHE GLY PHE MET SER ARG SEQRES 5 H 104 VAL ALA LEU GLN ALA GLU LYS LEU ASP HIS HIS PRO GLU SEQRES 6 H 104 TRP PHE ASN VAL TYR ASN LYS VAL HIS ILE THR LEU SER SEQRES 7 H 104 THR HIS GLU CYS ALA GLY LEU SER GLU ARG ASP ILE ASN SEQRES 8 H 104 LEU ALA SER PHE ILE GLU GLN VAL ALA VAL SER MET THR
HET SO4 A 105 5 HET GOL A 106 6 HET SO4 B 105 5 HET SO4 C 105 5 HET GOL C 106 6 HET SO4 D 105 5 HET GOL D 106 6 HET SO4 E 105 5 HET GOL E 106 6 HET SO4 F 105 5 HET GOL F 106 6 HET SO4 G 105 5 HET GOL G 106 6 HET GOL G 107 6 HET GOL G 108 6 HET SO4 H 105 5
HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 9 SO4 8(O4 S 2-) FORMUL 10 GOL 8(C3 H8 O3) FORMUL 25 HOH *524(H2 O)
HELIX 1 1 SER A 9 LEU A 17 1 9 HELIX 2 2 LEU A 17 ALA A 22 1 6 HELIX 3 3 ASP A 42 ASP A 61 1 20 HELIX 4 4 SER A 86 MET A 103 1 18 HELIX 5 5 SER B 9 LEU B 17 1 9 HELIX 6 6 LEU B 17 ALA B 22 1 6 HELIX 7 7 ASP B 42 ASP B 61 1 20 HELIX 8 8 SER B 86 VAL B 101 1 16 HELIX 9 9 SER C 9 LEU C 17 1 9 HELIX 10 10 LEU C 17 ALA C 22 1 6 HELIX 11 11 ASP C 42 ASP C 61 1 20 HELIX 12 12 SER C 86 VAL C 101 1 16 HELIX 13 13 SER D 9 ALA D 22 1 14 HELIX 14 14 ASP D 42 ASP D 61 1 20 HELIX 15 15 THR D 79 ALA D 83 5 5 HELIX 16 16 SER D 86 SER D 102 1 17 HELIX 17 17 SER E 9 VAL E 23 1 15 HELIX 18 18 ASP E 42 ASP E 61 1 20 HELIX 19 19 THR E 79 ALA E 83 5 5 HELIX 20 20 SER E 86 MET E 103 1 18 HELIX 21 21 SER F 9 LEU F 17 1 9 HELIX 22 22 LEU F 17 ALA F 22 1 6 HELIX 23 23 ASP F 42 ASP F 61 1 20 HELIX 24 24 SER F 86 SER F 102 1 17 HELIX 25 25 SER G 9 LEU G 17 1 9 HELIX 26 26 LEU G 17 ALA G 22 1 6 HELIX 27 27 ASP G 42 ASP G 61 1 20 HELIX 28 28 SER G 86 VAL G 101 1 16 HELIX 29 29 SER H 9 ALA H 22 1 14 HELIX 30 30 ASP H 42 ASP H 61 1 20 HELIX 31 31 THR H 79 ALA H 83 5 5 HELIX 32 32 SER H 86 MET H 103 1 18
SHEET 1 A 8 ASN A 26 GLU A 27 0 SHEET 2 A 8 ILE A 34 HIS A 39 -1 O PHE A 35 N ASN A 26 SHEET 3 A 8 LYS A 72 LEU A 77 -1 O ILE A 75 N LYS A 36 SHEET 4 A 8 GLU A 65 VAL A 69 -1 N PHE A 67 O HIS A 74 SHEET 5 A 8 GLU B 65 VAL B 69 -1 O TRP B 66 N ASN A 68 SHEET 6 A 8 LYS B 72 LEU B 77 -1 O HIS B 74 N PHE B 67 SHEET 7 A 8 ILE B 34 HIS B 39 -1 N PHE B 38 O VAL B 73 SHEET 8 A 8 ASN B 26 GLU B 27 -1 N ASN B 26 O PHE B 35 SHEET 1 B 8 ASN C 26 GLU C 27 0 SHEET 2 B 8 ILE C 34 HIS C 39 -1 O PHE C 35 N ASN C 26 SHEET 3 B 8 LYS C 72 LEU C 77 -1 O LEU C 77 N ILE C 34 SHEET 4 B 8 GLU C 65 VAL C 69 -1 N PHE C 67 O HIS C 74 SHEET 5 B 8 GLU D 65 VAL D 69 -1 O TRP D 66 N ASN C 68 SHEET 6 B 8 LYS D 72 LEU D 77 -1 O HIS D 74 N PHE D 67 SHEET 7 B 8 ILE D 34 HIS D 39 -1 N PHE D 38 O VAL D 73 SHEET 8 B 8 ASN D 26 GLU D 27 -1 N ASN D 26 O PHE D 35 SHEET 1 C 8 ASN E 26 GLU E 27 0 SHEET 2 C 8 ILE E 34 HIS E 39 -1 O PHE E 35 N ASN E 26 SHEET 3 C 8 LYS E 72 LEU E 77 -1 O LEU E 77 N ILE E 34 SHEET 4 C 8 GLU E 65 VAL E 69 -1 N PHE E 67 O HIS E 74 SHEET 5 C 8 GLU F 65 VAL F 69 -1 O TRP F 66 N ASN E 68 SHEET 6 C 8 LYS F 72 LEU F 77 -1 O THR F 76 N GLU F 65 SHEET 7 C 8 ILE F 34 HIS F 39 -1 N ILE F 34 O LEU F 77 SHEET 8 C 8 ASN F 26 GLU F 27 -1 N ASN F 26 O PHE F 35 SHEET 1 D 8 ASN G 26 GLU G 27 0 SHEET 2 D 8 ILE G 34 HIS G 39 -1 O PHE G 35 N ASN G 26 SHEET 3 D 8 LYS G 72 LEU G 77 -1 O LEU G 77 N ILE G 34 SHEET 4 D 8 GLU G 65 VAL G 69 -1 N PHE G 67 O HIS G 74 SHEET 5 D 8 GLU H 65 VAL H 69 -1 O TRP H 66 N ASN G 68 SHEET 6 D 8 LYS H 72 LEU H 77 -1 O HIS H 74 N PHE H 67 SHEET 7 D 8 ILE H 34 HIS H 39 -1 N ILE H 34 O LEU H 77 SHEET 8 D 8 ASN H 26 GLU H 27 -1 N ASN H 26 O PHE H 35
SITE 1 AC1 6 HIS A 62 THR A 79 HIS A 80 GLU A 81 SITE 2 AC1 6 ARG A 88 HOH A 118 SITE 1 AC2 3 PHE A 35 GLN H 15 LEU H 16 SITE 1 AC3 6 HIS B 62 THR B 79 HIS B 80 GLU B 81 SITE 2 AC3 6 ARG B 88 HOH B 331 SITE 1 AC4 6 HIS C 62 THR C 79 HIS C 80 GLU C 81 SITE 2 AC4 6 ARG C 88 HOH C 136 SITE 1 AC5 5 LYS C 36 GLU C 97 ALA C 100 HOH C 115 SITE 2 AC5 5 HOH C 512 SITE 1 AC6 7 HIS D 62 THR D 79 HIS D 80 GLU D 81 SITE 2 AC6 7 ARG D 88 HOH D 153 HOH D 296 SITE 1 AC7 3 LYS D 41 ARG D 45 HOH D 519 SITE 1 AC8 6 HIS E 62 THR E 79 HIS E 80 GLU E 81 SITE 2 AC8 6 ARG E 88 HOH E 109 SITE 1 AC9 5 ASN A 19 SER A 94 ALA E 22 VAL E 23 SITE 2 AC9 5 HOH E 261 SITE 1 BC1 6 HIS F 62 THR F 79 HIS F 80 GLU F 81 SITE 2 BC1 6 ARG F 88 HOH F 160 SITE 1 BC2 3 HIS F 6 ARG F 7 CYS F 82 SITE 1 BC3 7 HIS G 62 THR G 79 HIS G 80 GLU G 81 SITE 2 BC3 7 ARG G 88 GOL G 108 HOH G 131 SITE 1 BC4 4 HIS G 39 ASN G 71 LYS G 72 HOH G 318 SITE 1 BC5 7 ARG E 52 SER E 102 ARG G 45 SER G 102 SITE 2 BC5 7 MET G 103 HOH G 472 HOH G 522 SITE 1 BC6 4 ASP G 61 HIS G 63 SO4 G 105 HOH G 131 SITE 1 BC7 7 HIS H 62 THR H 79 HIS H 80 GLU H 81 SITE 2 BC7 7 ARG H 88 HOH H 340 HOH H 486
CRYST1 103.805 103.805 193.629 90.00 90.00 120.00 P 32 2 1 48
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009633 0.005562 0.000000 0.00000
SCALE2 0.000000 0.011124 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005165 0.00000