10 20 30 40 50 60 70 80 3H7R - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 28-APR-09 3H7R
TITLE CRYSTAL STRUCTURE OF THE PLANT STRESS-RESPONSE ENZYME AKR4C8
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDO-KETO REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PUTATIVE ALCOHOL DEHYDROGENASE, PROTEIN COMPND 5 AT2G37760.2; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT2G37760, DQ837653; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B(+)
KEYWDS STRESS RESPONSE, ALDO-KETO REDUCTASE, NADP, DROUGHT KEYWDS 2 TOLERANCE, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR S.A.WHITE,P.J.SIMPSON,J.P.RIDE
REVDAT 2 15-SEP-09 3H7R 1 JRNL REVDAT 1 04-AUG-09 3H7R 0
JRNL AUTH P.J.SIMPSON,C.TANTITADAPITAK,A.M.REED,O.C.MATHER, JRNL AUTH 2 C.M.BUNCE,S.A.WHITE,J.P.RIDE JRNL TITL CHARACTERIZATION OF TWO NOVEL ALDO-KETO REDUCTASES JRNL TITL 2 FROM ARABIDOPSIS: EXPRESSION PATTERNS, BROAD JRNL TITL 3 SUBSTRATE SPECIFICITY, AND AN OPEN ACTIVE-SITE JRNL TITL 4 STRUCTURE SUGGEST A ROLE IN TOXICANT METABOLISM JRNL TITL 5 FOLLOWING STRESS. JRNL REF J.MOL.BIOL. V. 392 465 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19616008 JRNL DOI 10.1016/J.JMB.2009.07.023
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 59308 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3201 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4397 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 230 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2585 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 417 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.057 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.060 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.038 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.932 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2773 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1949 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3787 ; 1.434 ; 2.008 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4836 ; 0.865 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 365 ; 5.120 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;38.702 ;25.351 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 524 ;11.400 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ; 8.151 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 424 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3003 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 501 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1629 ; 0.611 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 654 ; 0.168 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2667 ; 1.108 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1144 ; 1.821 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1087 ; 2.886 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 311 REMARK 3 ORIGIN FOR THE GROUP (A): 60.8780 -0.0290 17.7340 REMARK 3 T TENSOR REMARK 3 T11: -0.0458 T22: -0.0762 REMARK 3 T33: -0.0266 T12: 0.0133 REMARK 3 T13: 0.0242 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 1.1713 L22: 0.2879 REMARK 3 L33: 1.0175 L12: -0.0404 REMARK 3 L13: -0.2778 L23: -0.0652 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: 0.0515 S13: -0.0126 REMARK 3 S21: -0.0122 S22: -0.0211 S23: -0.0183 REMARK 3 S31: 0.0630 S32: 0.0062 S33: 0.0501 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 3H7R COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-09. REMARK 100 THE RCSB ID CODE IS RCSB052798.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62514 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : 0.06900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3H7U REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM AMMONIUM ACETATE, 50 MM TRI- REMARK 280 SODIUM CITRATE DIHYDRATE PH 6.0, 5% V/V ETHYLENE GLYCOL, 32% REMARK 280 W/V PEG 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 86.71550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.95450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 86.71550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.95450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 144 O1 EDO A 508 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 120 -65.05 -127.31 REMARK 500 SER A 207 168.67 81.40 REMARK 500 LEU A 250 53.03 -119.65 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 401 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 501 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 502 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 503 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 504 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 505 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 506 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 507 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 508 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 509 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 510 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 511 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 512 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 513
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3H7U RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PLANT STRESS-RESPONSE ENZYME AKR4C9
DBREF 3H7R A 1 311 UNP O80944 O80944_ARATH 1 311
SEQADV 3H7R MET A -19 UNP O80944 INSERTION SEQADV 3H7R GLY A -18 UNP O80944 INSERTION SEQADV 3H7R SER A -17 UNP O80944 INSERTION SEQADV 3H7R SER A -16 UNP O80944 INSERTION SEQADV 3H7R HIS A -15 UNP O80944 INSERTION SEQADV 3H7R HIS A -14 UNP O80944 INSERTION SEQADV 3H7R HIS A -13 UNP O80944 INSERTION SEQADV 3H7R HIS A -12 UNP O80944 INSERTION SEQADV 3H7R HIS A -11 UNP O80944 INSERTION SEQADV 3H7R HIS A -10 UNP O80944 INSERTION SEQADV 3H7R SER A -9 UNP O80944 INSERTION SEQADV 3H7R SER A -8 UNP O80944 INSERTION SEQADV 3H7R GLY A -7 UNP O80944 INSERTION SEQADV 3H7R LEU A -6 UNP O80944 INSERTION SEQADV 3H7R VAL A -5 UNP O80944 INSERTION SEQADV 3H7R PRO A -4 UNP O80944 INSERTION SEQADV 3H7R ARG A -3 UNP O80944 INSERTION SEQADV 3H7R GLY A -2 UNP O80944 INSERTION SEQADV 3H7R SER A -1 UNP O80944 INSERTION SEQADV 3H7R HIS A 0 UNP O80944 INSERTION
SEQRES 1 A 331 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 331 LEU VAL PRO ARG GLY SER HIS MET ALA ALA PRO ILE ARG SEQRES 3 A 331 PHE PHE GLU LEU ASN THR GLY ALA LYS LEU PRO CYS VAL SEQRES 4 A 331 GLY LEU GLY THR TYR ALA MET VAL ALA THR ALA ILE GLU SEQRES 5 A 331 GLN ALA ILE LYS ILE GLY TYR ARG HIS ILE ASP CYS ALA SEQRES 6 A 331 SER ILE TYR GLY ASN GLU LYS GLU ILE GLY GLY VAL LEU SEQRES 7 A 331 LYS LYS LEU ILE GLY ASP GLY PHE VAL LYS ARG GLU GLU SEQRES 8 A 331 LEU PHE ILE THR SER LYS LEU TRP SER ASN ASP HIS LEU SEQRES 9 A 331 PRO GLU ASP VAL PRO LYS ALA LEU GLU LYS THR LEU GLN SEQRES 10 A 331 ASP LEU GLN ILE ASP TYR VAL ASP LEU TYR LEU ILE HIS SEQRES 11 A 331 TRP PRO ALA SER LEU LYS LYS GLU SER LEU MET PRO THR SEQRES 12 A 331 PRO GLU MET LEU THR LYS PRO ASP ILE THR SER THR TRP SEQRES 13 A 331 LYS ALA MET GLU ALA LEU TYR ASP SER GLY LYS ALA ARG SEQRES 14 A 331 ALA ILE GLY VAL SER ASN PHE SER SER LYS LYS LEU THR SEQRES 15 A 331 ASP LEU LEU ASN VAL ALA ARG VAL THR PRO ALA VAL ASN SEQRES 16 A 331 GLN VAL GLU CYS HIS PRO VAL TRP GLN GLN GLN GLY LEU SEQRES 17 A 331 HIS GLU LEU CYS LYS SER LYS GLY VAL HIS LEU SER GLY SEQRES 18 A 331 TYR SER PRO LEU GLY SER GLN SER LYS GLY GLU VAL ARG SEQRES 19 A 331 LEU LYS VAL LEU GLN ASN PRO ILE VAL THR GLU VAL ALA SEQRES 20 A 331 GLU LYS LEU GLY LYS THR THR ALA GLN VAL ALA LEU ARG SEQRES 21 A 331 TRP GLY LEU GLN THR GLY HIS SER VAL LEU PRO LYS SER SEQRES 22 A 331 SER SER GLY ALA ARG LEU LYS GLU ASN LEU ASP VAL PHE SEQRES 23 A 331 ASP TRP SER ILE PRO GLU ASP LEU PHE THR LYS PHE SER SEQRES 24 A 331 ASN ILE PRO GLN GLU LYS PHE CYS ARG ALA THR GLU PHE SEQRES 25 A 331 ALA HIS GLU THR HIS GLY PHE TYR LYS THR ILE GLU GLU SEQRES 26 A 331 LEU TRP ASP GLY GLU ILE
HET NAP A 401 54 HET ACT A 501 4 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HET EDO A 512 4 HET EDO A 513 4
HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL
HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN EDO ETHYLENE GLYCOL
FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 EDO 12(C2 H6 O2) FORMUL 16 HOH *406(H2 O)
HELIX 1 1 VAL A 27 GLY A 38 1 12 HELIX 2 2 ALA A 45 GLY A 49 5 5 HELIX 3 3 ASN A 50 ASP A 64 1 15 HELIX 4 4 LYS A 68 LEU A 72 5 5 HELIX 5 5 TRP A 79 HIS A 83 5 5 HELIX 6 6 GLU A 86 GLN A 100 1 15 HELIX 7 7 THR A 123 GLU A 125 5 3 HELIX 8 8 ASP A 131 SER A 145 1 15 HELIX 9 9 SER A 157 ALA A 168 1 12 HELIX 10 10 GLN A 185 GLY A 196 1 12 HELIX 11 11 ARG A 214 GLN A 219 1 6 HELIX 12 12 ASN A 220 GLY A 231 1 12 HELIX 13 13 THR A 233 THR A 245 1 13 HELIX 14 14 SER A 255 LEU A 263 1 9 HELIX 15 15 PRO A 271 THR A 276 1 6 HELIX 16 16 LYS A 277 ILE A 281 5 5 HELIX 17 17 ALA A 289 ALA A 293 5 5 HELIX 18 18 THR A 302 TRP A 307 1 6
SHEET 1 A 2 PHE A 7 GLU A 9 0 SHEET 2 A 2 LYS A 15 PRO A 17 -1 O LEU A 16 N PHE A 8 SHEET 1 B 8 GLY A 20 GLY A 22 0 SHEET 2 B 8 HIS A 41 ASP A 43 1 O ASP A 43 N LEU A 21 SHEET 3 B 8 PHE A 73 LEU A 78 1 O PHE A 73 N ILE A 42 SHEET 4 B 8 LEU A 106 ILE A 109 1 O LEU A 108 N LEU A 78 SHEET 5 B 8 ILE A 151 SER A 154 1 O GLY A 152 N TYR A 107 SHEET 6 B 8 VAL A 174 GLU A 178 1 O VAL A 174 N VAL A 153 SHEET 7 B 8 HIS A 198 TYR A 202 1 O SER A 200 N VAL A 177 SHEET 8 B 8 SER A 248 VAL A 249 1 O SER A 248 N GLY A 201 SHEET 1 C 2 SER A 114 LEU A 115 0 SHEET 2 C 2 LEU A 127 THR A 128 -1 O THR A 128 N SER A 114
SITE 1 AC1 33 GLY A 22 THR A 23 TYR A 24 ASP A 43 SITE 2 AC1 33 TYR A 48 HIS A 110 SER A 154 ASN A 155 SITE 3 AC1 33 GLN A 176 TYR A 202 SER A 203 PRO A 204 SITE 4 AC1 33 LEU A 205 GLY A 206 SER A 207 GLN A 208 SITE 5 AC1 33 ARG A 214 ALA A 235 LEU A 250 PRO A 251 SITE 6 AC1 33 LYS A 252 SER A 253 SER A 254 ARG A 258 SITE 7 AC1 33 GLU A 261 ASN A 262 ACT A 501 HOH A 637 SITE 8 AC1 33 HOH A 836 HOH A 839 HOH A 972 HOH A 993 SITE 9 AC1 33 HOH A1002 SITE 1 AC2 6 TYR A 24 TYR A 48 HIS A 110 NAP A 401 SITE 2 AC2 6 HOH A 692 HOH A 951 SITE 1 AC3 6 PRO A 17 CYS A 18 VAL A 19 ARG A 40 SITE 2 AC3 6 HIS A 41 HOH A 787 SITE 1 AC4 6 GLN A 185 GLY A 187 LEU A 188 GLU A 310 SITE 2 AC4 6 HOH A 652 HOH A 710 SITE 1 AC5 8 THR A 123 PRO A 124 THR A 290 GLU A 291 SITE 2 AC5 8 ALA A 293 HIS A 294 HOH A 747 HOH A 997 SITE 1 AC6 6 LYS A 15 LEU A 72 PHE A 73 HOH A 633 SITE 2 AC6 6 HOH A 739 HOH A 926 SITE 1 AC7 9 ILE A 35 LYS A 36 ILE A 37 GLY A 38 SITE 2 AC7 9 ARG A 40 PHE A 66 HOH A 734 HOH A 768 SITE 3 AC7 9 HOH A 948 SITE 1 AC8 6 ALA A 141 LYS A 216 EDO A 508 HOH A 845 SITE 2 AC8 6 HOH A 920 HOH A 953 SITE 1 AC9 9 GLU A 140 ALA A 141 ASP A 144 ARG A 169 SITE 2 AC9 9 LYS A 216 EDO A 507 HOH A 676 HOH A 766 SITE 3 AC9 9 HOH A 958 SITE 1 BC1 5 GLU A 9 ASN A 11 LYS A 52 GLY A 196 SITE 2 BC1 5 HOH A 703 SITE 1 BC2 5 GLU A 125 GLU A 284 ARG A 288 HOH A 905 SITE 2 BC2 5 HOH A 974 SITE 1 BC3 3 LEU A 127 HIS A 297 PHE A 299 SITE 1 BC4 6 GLN A 184 GLN A 186 GLN A 283 HOH A 621 SITE 2 BC4 6 HOH A 765 HOH A 813 SITE 1 BC5 4 GLU A 291 PHE A 292 HOH A 692 HOH A 723
CRYST1 173.431 39.909 47.223 90.00 99.63 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005766 0.000000 0.000978 0.00000
SCALE2 0.000000 0.025057 0.000000 0.00000
SCALE3 0.000000 0.000000 0.021478 0.00000