10 20 30 40 50 60 70 80 3GVI - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 31-MAR-09 3GVI
TITLE CRYSTAL STRUCTURE OF LACTATE/MALATE DEHYDROGENASE FROM TITLE 2 BRUCELLA MELITENSIS IN COMPLEX WITH ADP
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALATE DEHYDROGENASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 EC: 1.1.1.37; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA MELITENSIS BIOVAR ABORTUS SOURCE 3 2308; SOURCE 4 ORGANISM_TAXID: 359391; SOURCE 5 GENE: MDH, BAB1_1927; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421
KEYWDS LACTATE/MALATE DEHYDROGENASE, BRUCELLA MELITENSIS, NAD, KEYWDS 2 OXIDOREDUCTASE, TRICARBOXYLIC ACID CYCLE, STRUCTURAL KEYWDS 3 GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 4 DISEASE, SSGCID
EXPDTA X-RAY DIFFRACTION
AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 2 (SSGCID)
REVDAT 1 14-APR-09 3GVI 0
JRNL AUTH J.ABENDROTH,B.STAKER JRNL TITL CRYSTAL STRUCTURE OF LACTATE/MALATE DEHYDROGENASE JRNL TITL 2 FROM BRUCELLA MELITENSIS IN COMPLEX WITH ADP JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 193.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 99617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5960 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 305 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13710 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 162 REMARK 3 SOLVENT ATOMS : 1311 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.49000 REMARK 3 B22 (A**2) : 0.67000 REMARK 3 B33 (A**2) : -1.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.269 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.128 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.079 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 14106 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 9138 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 19173 ; 1.525 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 22518 ; 0.927 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1871 ; 5.580 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 497 ;39.254 ;25.171 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2251 ;14.105 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;14.413 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2255 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 15787 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2639 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 9271 ; 0.756 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3892 ; 0.232 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 14748 ; 1.412 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4835 ; 2.340 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4425 ; 3.748 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D E F REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 320 4 REMARK 3 1 B 1 B 320 4 REMARK 3 1 C 1 C 320 4 REMARK 3 1 D 1 D 320 4 REMARK 3 1 E 1 E 320 4 REMARK 3 1 F 1 F 320 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 3760 ; 0.270 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 3760 ; 0.270 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 3760 ; 0.260 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 D (A): 3760 ; 0.360 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 E (A): 3760 ; 0.270 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 F (A): 3760 ; 0.410 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 3760 ; 0.980 ; 2.000 REMARK 3 MEDIUM THERMAL 1 B (A**2): 3760 ; 0.780 ; 2.000 REMARK 3 MEDIUM THERMAL 1 C (A**2): 3760 ; 0.690 ; 2.000 REMARK 3 MEDIUM THERMAL 1 D (A**2): 3760 ; 0.850 ; 2.000 REMARK 3 MEDIUM THERMAL 1 E (A**2): 3760 ; 0.830 ; 2.000 REMARK 3 MEDIUM THERMAL 1 F (A**2): 3760 ; 1.210 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3GVI COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-09. REMARK 100 THE RCSB ID CODE IS RCSB052358.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99622 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 193.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.15200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3GVH REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG+ SCREEN, H3: 25% PEG 3350, REMARK 280 100MM BISTRIS, BRABA.00005.A AT 28.5MG/ML, PH 5.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 53.69500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 96.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.69500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 96.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 107.39000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 193.90000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 PRO A 85 REMARK 465 GLY A 86 REMARK 465 MET A 87 REMARK 465 SER A 88 REMARK 465 ARG A 89 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 PRO B 85 REMARK 465 GLY B 86 REMARK 465 MET B 87 REMARK 465 SER B 88 REMARK 465 ARG B 89 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 PRO C 85 REMARK 465 GLY C 86 REMARK 465 MET C 87 REMARK 465 SER C 88 REMARK 465 ARG C 89 REMARK 465 GLY D -3 REMARK 465 PRO D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 PRO D 85 REMARK 465 GLY D 86 REMARK 465 MET D 87 REMARK 465 SER D 88 REMARK 465 ARG D 89 REMARK 465 LYS D 320 REMARK 465 GLY E -3 REMARK 465 PRO E -2 REMARK 465 GLY E -1 REMARK 465 SER E 0 REMARK 465 MET E 1 REMARK 465 PRO E 85 REMARK 465 GLY E 86 REMARK 465 MET E 87 REMARK 465 SER E 88 REMARK 465 ARG E 89 REMARK 465 GLY F -3 REMARK 465 PRO F -2 REMARK 465 GLY F -1 REMARK 465 SER F 0 REMARK 465 MET F 1 REMARK 465 PRO F 85 REMARK 465 GLY F 86 REMARK 465 MET F 87 REMARK 465 SER F 88 REMARK 465 ARG F 89
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 ASP A 90 CG OD1 OD2 REMARK 470 ASP A 91 CG OD1 OD2 REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 ARG B 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 84 CG CD CE NZ REMARK 470 ASP B 90 CG OD1 OD2 REMARK 470 ASP B 91 CG OD1 OD2 REMARK 470 LYS B 98 CG CD CE NZ REMARK 470 LYS B 210 CG CD CE NZ REMARK 470 ASN B 280 CG OD1 ND2 REMARK 470 LYS B 292 CG CD CE NZ REMARK 470 LYS B 320 CG CD CE NZ REMARK 470 ARG C 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 84 CG CD CE NZ REMARK 470 ASP C 90 CG OD1 OD2 REMARK 470 ASP C 91 CG OD1 OD2 REMARK 470 LYS C 98 CG CD CE NZ REMARK 470 LYS C 210 CG CD CE NZ REMARK 470 LYS C 292 CG CD CE NZ REMARK 470 LYS C 320 CG CD CE NZ REMARK 470 ARG D 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 84 CG CD CE NZ REMARK 470 ASP D 90 CG OD1 OD2 REMARK 470 ASP D 91 CG OD1 OD2 REMARK 470 LYS D 98 CG CD CE NZ REMARK 470 LYS D 210 CG CD CE NZ REMARK 470 LYS D 292 CG CD CE NZ REMARK 470 ARG E 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 84 CG CD CE NZ REMARK 470 ASP E 90 CG OD1 OD2 REMARK 470 ASP E 91 CG OD1 OD2 REMARK 470 LYS E 98 CG CD CE NZ REMARK 470 LYS E 210 CG CD CE NZ REMARK 470 LYS E 292 CG CD CE NZ REMARK 470 LYS E 300 CG CD CE NZ REMARK 470 LYS E 320 CG CD CE NZ REMARK 470 ARG F 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 84 CG CD CE NZ REMARK 470 ASP F 90 CG OD1 OD2 REMARK 470 ASP F 91 CG OD1 OD2 REMARK 470 LYS F 98 CG CD CE NZ REMARK 470 LYS F 199 CG CD CE NZ REMARK 470 LYS F 210 CG CD CE NZ REMARK 470 LYS F 292 CG CD CE NZ REMARK 470 LYS F 300 CG CD CE NZ REMARK 470 LYS F 320 CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 54 CB - CG - OD1 ANGL. DEV. = -6.6 DEGREES REMARK 500 ASP A 54 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 MET B 13 CG - SD - CE ANGL. DEV. = 11.0 DEGREES REMARK 500 ASP B 124 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ASP C 54 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP D 54 CB - CG - OD1 ANGL. DEV. = -7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 145 -60.16 -154.52 REMARK 500 LYS A 227 -44.70 67.52 REMARK 500 ALA B 145 -60.67 -154.82 REMARK 500 LYS B 227 -48.39 71.26 REMARK 500 PHE B 232 -32.77 -134.84 REMARK 500 ALA C 145 -59.71 -157.55 REMARK 500 LYS C 227 -44.27 68.55 REMARK 500 ALA D 145 -52.68 -150.74 REMARK 500 LYS D 227 -45.97 63.45 REMARK 500 ALA E 145 -60.01 -149.13 REMARK 500 LYS E 227 -40.31 68.24 REMARK 500 ARG F 83 97.18 -65.45 REMARK 500 LEU F 92 -71.65 -49.92 REMARK 500 LEU F 93 -43.82 -29.17 REMARK 500 ALA F 145 -56.16 -144.39 REMARK 500 LYS F 227 -40.08 75.46 REMARK 500 TYR F 264 10.48 58.03 REMARK 500 SER F 318 -8.56 -58.44 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 401 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 401 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP C 401 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP D 401 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP E 401 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP F 401
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GVH RELATED DB: PDB REMARK 900 NATIVE STRUCTURE WITH NAD BOUND REMARK 900 RELATED ID: BRABA.00005.A RELATED DB: TARGETDB
DBREF 3GVI A 1 320 UNP Q2YLR9 MDH_BRUA2 1 320 DBREF 3GVI B 1 320 UNP Q2YLR9 MDH_BRUA2 1 320 DBREF 3GVI C 1 320 UNP Q2YLR9 MDH_BRUA2 1 320 DBREF 3GVI D 1 320 UNP Q2YLR9 MDH_BRUA2 1 320 DBREF 3GVI E 1 320 UNP Q2YLR9 MDH_BRUA2 1 320 DBREF 3GVI F 1 320 UNP Q2YLR9 MDH_BRUA2 1 320
SEQADV 3GVI GLY A -3 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI PRO A -2 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY A -1 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI SER A 0 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY B -3 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI PRO B -2 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY B -1 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI SER B 0 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY C -3 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI PRO C -2 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY C -1 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI SER C 0 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY D -3 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI PRO D -2 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY D -1 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI SER D 0 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY E -3 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI PRO E -2 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY E -1 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI SER E 0 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY F -3 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI PRO F -2 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI GLY F -1 UNP Q2YLR9 EXPRESSION TAG SEQADV 3GVI SER F 0 UNP Q2YLR9 EXPRESSION TAG
SEQRES 1 A 324 GLY PRO GLY SER MET ALA ARG ASN LYS ILE ALA LEU ILE SEQRES 2 A 324 GLY SER GLY MET ILE GLY GLY THR LEU ALA HIS LEU ALA SEQRES 3 A 324 GLY LEU LYS GLU LEU GLY ASP VAL VAL LEU PHE ASP ILE SEQRES 4 A 324 ALA GLU GLY THR PRO GLN GLY LYS GLY LEU ASP ILE ALA SEQRES 5 A 324 GLU SER SER PRO VAL ASP GLY PHE ASP ALA LYS PHE THR SEQRES 6 A 324 GLY ALA ASN ASP TYR ALA ALA ILE GLU GLY ALA ASP VAL SEQRES 7 A 324 VAL ILE VAL THR ALA GLY VAL PRO ARG LYS PRO GLY MET SEQRES 8 A 324 SER ARG ASP ASP LEU LEU GLY ILE ASN LEU LYS VAL MET SEQRES 9 A 324 GLU GLN VAL GLY ALA GLY ILE LYS LYS TYR ALA PRO GLU SEQRES 10 A 324 ALA PHE VAL ILE CYS ILE THR ASN PRO LEU ASP ALA MET SEQRES 11 A 324 VAL TRP ALA LEU GLN LYS PHE SER GLY LEU PRO ALA HIS SEQRES 12 A 324 LYS VAL VAL GLY MET ALA GLY VAL LEU ASP SER ALA ARG SEQRES 13 A 324 PHE ARG TYR PHE LEU SER GLU GLU PHE ASN VAL SER VAL SEQRES 14 A 324 GLU ASP VAL THR VAL PHE VAL LEU GLY GLY HIS GLY ASP SEQRES 15 A 324 SER MET VAL PRO LEU ALA ARG TYR SER THR VAL ALA GLY SEQRES 16 A 324 ILE PRO LEU PRO ASP LEU VAL LYS MET GLY TRP THR SER SEQRES 17 A 324 GLN ASP LYS LEU ASP LYS ILE ILE GLN ARG THR ARG ASP SEQRES 18 A 324 GLY GLY ALA GLU ILE VAL GLY LEU LEU LYS THR GLY SER SEQRES 19 A 324 ALA PHE TYR ALA PRO ALA ALA SER ALA ILE GLN MET ALA SEQRES 20 A 324 GLU SER TYR LEU LYS ASP LYS LYS ARG VAL LEU PRO VAL SEQRES 21 A 324 ALA ALA GLN LEU SER GLY GLN TYR GLY VAL LYS ASP MET SEQRES 22 A 324 TYR VAL GLY VAL PRO THR VAL ILE GLY ALA ASN GLY VAL SEQRES 23 A 324 GLU ARG ILE ILE GLU ILE ASP LEU ASP LYS ASP GLU LYS SEQRES 24 A 324 ALA GLN PHE ASP LYS SER VAL ALA SER VAL ALA GLY LEU SEQRES 25 A 324 CYS GLU ALA CYS ILE GLY ILE ALA PRO SER LEU LYS SEQRES 1 B 324 GLY PRO GLY SER MET ALA ARG ASN LYS ILE ALA LEU ILE SEQRES 2 B 324 GLY SER GLY MET ILE GLY GLY THR LEU ALA HIS LEU ALA SEQRES 3 B 324 GLY LEU LYS GLU LEU GLY ASP VAL VAL LEU PHE ASP ILE SEQRES 4 B 324 ALA GLU GLY THR PRO GLN GLY LYS GLY LEU ASP ILE ALA SEQRES 5 B 324 GLU SER SER PRO VAL ASP GLY PHE ASP ALA LYS PHE THR SEQRES 6 B 324 GLY ALA ASN ASP TYR ALA ALA ILE GLU GLY ALA ASP VAL SEQRES 7 B 324 VAL ILE VAL THR ALA GLY VAL PRO ARG LYS PRO GLY MET SEQRES 8 B 324 SER ARG ASP ASP LEU LEU GLY ILE ASN LEU LYS VAL MET SEQRES 9 B 324 GLU GLN VAL GLY ALA GLY ILE LYS LYS TYR ALA PRO GLU SEQRES 10 B 324 ALA PHE VAL ILE CYS ILE THR ASN PRO LEU ASP ALA MET SEQRES 11 B 324 VAL TRP ALA LEU GLN LYS PHE SER GLY LEU PRO ALA HIS SEQRES 12 B 324 LYS VAL VAL GLY MET ALA GLY VAL LEU ASP SER ALA ARG SEQRES 13 B 324 PHE ARG TYR PHE LEU SER GLU GLU PHE ASN VAL SER VAL SEQRES 14 B 324 GLU ASP VAL THR VAL PHE VAL LEU GLY GLY HIS GLY ASP SEQRES 15 B 324 SER MET VAL PRO LEU ALA ARG TYR SER THR VAL ALA GLY SEQRES 16 B 324 ILE PRO LEU PRO ASP LEU VAL LYS MET GLY TRP THR SER SEQRES 17 B 324 GLN ASP LYS LEU ASP LYS ILE ILE GLN ARG THR ARG ASP SEQRES 18 B 324 GLY GLY ALA GLU ILE VAL GLY LEU LEU LYS THR GLY SER SEQRES 19 B 324 ALA PHE TYR ALA PRO ALA ALA SER ALA ILE GLN MET ALA SEQRES 20 B 324 GLU SER TYR LEU LYS ASP LYS LYS ARG VAL LEU PRO VAL SEQRES 21 B 324 ALA ALA GLN LEU SER GLY GLN TYR GLY VAL LYS ASP MET SEQRES 22 B 324 TYR VAL GLY VAL PRO THR VAL ILE GLY ALA ASN GLY VAL SEQRES 23 B 324 GLU ARG ILE ILE GLU ILE ASP LEU ASP LYS ASP GLU LYS SEQRES 24 B 324 ALA GLN PHE ASP LYS SER VAL ALA SER VAL ALA GLY LEU SEQRES 25 B 324 CYS GLU ALA CYS ILE GLY ILE ALA PRO SER LEU LYS SEQRES 1 C 324 GLY PRO GLY SER MET ALA ARG ASN LYS ILE ALA LEU ILE SEQRES 2 C 324 GLY SER GLY MET ILE GLY GLY THR LEU ALA HIS LEU ALA SEQRES 3 C 324 GLY LEU LYS GLU LEU GLY ASP VAL VAL LEU PHE ASP ILE SEQRES 4 C 324 ALA GLU GLY THR PRO GLN GLY LYS GLY LEU ASP ILE ALA SEQRES 5 C 324 GLU SER SER PRO VAL ASP GLY PHE ASP ALA LYS PHE THR SEQRES 6 C 324 GLY ALA ASN ASP TYR ALA ALA ILE GLU GLY ALA ASP VAL SEQRES 7 C 324 VAL ILE VAL THR ALA GLY VAL PRO ARG LYS PRO GLY MET SEQRES 8 C 324 SER ARG ASP ASP LEU LEU GLY ILE ASN LEU LYS VAL MET SEQRES 9 C 324 GLU GLN VAL GLY ALA GLY ILE LYS LYS TYR ALA PRO GLU SEQRES 10 C 324 ALA PHE VAL ILE CYS ILE THR ASN PRO LEU ASP ALA MET SEQRES 11 C 324 VAL TRP ALA LEU GLN LYS PHE SER GLY LEU PRO ALA HIS SEQRES 12 C 324 LYS VAL VAL GLY MET ALA GLY VAL LEU ASP SER ALA ARG SEQRES 13 C 324 PHE ARG TYR PHE LEU SER GLU GLU PHE ASN VAL SER VAL SEQRES 14 C 324 GLU ASP VAL THR VAL PHE VAL LEU GLY GLY HIS GLY ASP SEQRES 15 C 324 SER MET VAL PRO LEU ALA ARG TYR SER THR VAL ALA GLY SEQRES 16 C 324 ILE PRO LEU PRO ASP LEU VAL LYS MET GLY TRP THR SER SEQRES 17 C 324 GLN ASP LYS LEU ASP LYS ILE ILE GLN ARG THR ARG ASP SEQRES 18 C 324 GLY GLY ALA GLU ILE VAL GLY LEU LEU LYS THR GLY SER SEQRES 19 C 324 ALA PHE TYR ALA PRO ALA ALA SER ALA ILE GLN MET ALA SEQRES 20 C 324 GLU SER TYR LEU LYS ASP LYS LYS ARG VAL LEU PRO VAL SEQRES 21 C 324 ALA ALA GLN LEU SER GLY GLN TYR GLY VAL LYS ASP MET SEQRES 22 C 324 TYR VAL GLY VAL PRO THR VAL ILE GLY ALA ASN GLY VAL SEQRES 23 C 324 GLU ARG ILE ILE GLU ILE ASP LEU ASP LYS ASP GLU LYS SEQRES 24 C 324 ALA GLN PHE ASP LYS SER VAL ALA SER VAL ALA GLY LEU SEQRES 25 C 324 CYS GLU ALA CYS ILE GLY ILE ALA PRO SER LEU LYS SEQRES 1 D 324 GLY PRO GLY SER MET ALA ARG ASN LYS ILE ALA LEU ILE SEQRES 2 D 324 GLY SER GLY MET ILE GLY GLY THR LEU ALA HIS LEU ALA SEQRES 3 D 324 GLY LEU LYS GLU LEU GLY ASP VAL VAL LEU PHE ASP ILE SEQRES 4 D 324 ALA GLU GLY THR PRO GLN GLY LYS GLY LEU ASP ILE ALA SEQRES 5 D 324 GLU SER SER PRO VAL ASP GLY PHE ASP ALA LYS PHE THR SEQRES 6 D 324 GLY ALA ASN ASP TYR ALA ALA ILE GLU GLY ALA ASP VAL SEQRES 7 D 324 VAL ILE VAL THR ALA GLY VAL PRO ARG LYS PRO GLY MET SEQRES 8 D 324 SER ARG ASP ASP LEU LEU GLY ILE ASN LEU LYS VAL MET SEQRES 9 D 324 GLU GLN VAL GLY ALA GLY ILE LYS LYS TYR ALA PRO GLU SEQRES 10 D 324 ALA PHE VAL ILE CYS ILE THR ASN PRO LEU ASP ALA MET SEQRES 11 D 324 VAL TRP ALA LEU GLN LYS PHE SER GLY LEU PRO ALA HIS SEQRES 12 D 324 LYS VAL VAL GLY MET ALA GLY VAL LEU ASP SER ALA ARG SEQRES 13 D 324 PHE ARG TYR PHE LEU SER GLU GLU PHE ASN VAL SER VAL SEQRES 14 D 324 GLU ASP VAL THR VAL PHE VAL LEU GLY GLY HIS GLY ASP SEQRES 15 D 324 SER MET VAL PRO LEU ALA ARG TYR SER THR VAL ALA GLY SEQRES 16 D 324 ILE PRO LEU PRO ASP LEU VAL LYS MET GLY TRP THR SER SEQRES 17 D 324 GLN ASP LYS LEU ASP LYS ILE ILE GLN ARG THR ARG ASP SEQRES 18 D 324 GLY GLY ALA GLU ILE VAL GLY LEU LEU LYS THR GLY SER SEQRES 19 D 324 ALA PHE TYR ALA PRO ALA ALA SER ALA ILE GLN MET ALA SEQRES 20 D 324 GLU SER TYR LEU LYS ASP LYS LYS ARG VAL LEU PRO VAL SEQRES 21 D 324 ALA ALA GLN LEU SER GLY GLN TYR GLY VAL LYS ASP MET SEQRES 22 D 324 TYR VAL GLY VAL PRO THR VAL ILE GLY ALA ASN GLY VAL SEQRES 23 D 324 GLU ARG ILE ILE GLU ILE ASP LEU ASP LYS ASP GLU LYS SEQRES 24 D 324 ALA GLN PHE ASP LYS SER VAL ALA SER VAL ALA GLY LEU SEQRES 25 D 324 CYS GLU ALA CYS ILE GLY ILE ALA PRO SER LEU LYS SEQRES 1 E 324 GLY PRO GLY SER MET ALA ARG ASN LYS ILE ALA LEU ILE SEQRES 2 E 324 GLY SER GLY MET ILE GLY GLY THR LEU ALA HIS LEU ALA SEQRES 3 E 324 GLY LEU LYS GLU LEU GLY ASP VAL VAL LEU PHE ASP ILE SEQRES 4 E 324 ALA GLU GLY THR PRO GLN GLY LYS GLY LEU ASP ILE ALA SEQRES 5 E 324 GLU SER SER PRO VAL ASP GLY PHE ASP ALA LYS PHE THR SEQRES 6 E 324 GLY ALA ASN ASP TYR ALA ALA ILE GLU GLY ALA ASP VAL SEQRES 7 E 324 VAL ILE VAL THR ALA GLY VAL PRO ARG LYS PRO GLY MET SEQRES 8 E 324 SER ARG ASP ASP LEU LEU GLY ILE ASN LEU LYS VAL MET SEQRES 9 E 324 GLU GLN VAL GLY ALA GLY ILE LYS LYS TYR ALA PRO GLU SEQRES 10 E 324 ALA PHE VAL ILE CYS ILE THR ASN PRO LEU ASP ALA MET SEQRES 11 E 324 VAL TRP ALA LEU GLN LYS PHE SER GLY LEU PRO ALA HIS SEQRES 12 E 324 LYS VAL VAL GLY MET ALA GLY VAL LEU ASP SER ALA ARG SEQRES 13 E 324 PHE ARG TYR PHE LEU SER GLU GLU PHE ASN VAL SER VAL SEQRES 14 E 324 GLU ASP VAL THR VAL PHE VAL LEU GLY GLY HIS GLY ASP SEQRES 15 E 324 SER MET VAL PRO LEU ALA ARG TYR SER THR VAL ALA GLY SEQRES 16 E 324 ILE PRO LEU PRO ASP LEU VAL LYS MET GLY TRP THR SER SEQRES 17 E 324 GLN ASP LYS LEU ASP LYS ILE ILE GLN ARG THR ARG ASP SEQRES 18 E 324 GLY GLY ALA GLU ILE VAL GLY LEU LEU LYS THR GLY SER SEQRES 19 E 324 ALA PHE TYR ALA PRO ALA ALA SER ALA ILE GLN MET ALA SEQRES 20 E 324 GLU SER TYR LEU LYS ASP LYS LYS ARG VAL LEU PRO VAL SEQRES 21 E 324 ALA ALA GLN LEU SER GLY GLN TYR GLY VAL LYS ASP MET SEQRES 22 E 324 TYR VAL GLY VAL PRO THR VAL ILE GLY ALA ASN GLY VAL SEQRES 23 E 324 GLU ARG ILE ILE GLU ILE ASP LEU ASP LYS ASP GLU LYS SEQRES 24 E 324 ALA GLN PHE ASP LYS SER VAL ALA SER VAL ALA GLY LEU SEQRES 25 E 324 CYS GLU ALA CYS ILE GLY ILE ALA PRO SER LEU LYS SEQRES 1 F 324 GLY PRO GLY SER MET ALA ARG ASN LYS ILE ALA LEU ILE SEQRES 2 F 324 GLY SER GLY MET ILE GLY GLY THR LEU ALA HIS LEU ALA SEQRES 3 F 324 GLY LEU LYS GLU LEU GLY ASP VAL VAL LEU PHE ASP ILE SEQRES 4 F 324 ALA GLU GLY THR PRO GLN GLY LYS GLY LEU ASP ILE ALA SEQRES 5 F 324 GLU SER SER PRO VAL ASP GLY PHE ASP ALA LYS PHE THR SEQRES 6 F 324 GLY ALA ASN ASP TYR ALA ALA ILE GLU GLY ALA ASP VAL SEQRES 7 F 324 VAL ILE VAL THR ALA GLY VAL PRO ARG LYS PRO GLY MET SEQRES 8 F 324 SER ARG ASP ASP LEU LEU GLY ILE ASN LEU LYS VAL MET SEQRES 9 F 324 GLU GLN VAL GLY ALA GLY ILE LYS LYS TYR ALA PRO GLU SEQRES 10 F 324 ALA PHE VAL ILE CYS ILE THR ASN PRO LEU ASP ALA MET SEQRES 11 F 324 VAL TRP ALA LEU GLN LYS PHE SER GLY LEU PRO ALA HIS SEQRES 12 F 324 LYS VAL VAL GLY MET ALA GLY VAL LEU ASP SER ALA ARG SEQRES 13 F 324 PHE ARG TYR PHE LEU SER GLU GLU PHE ASN VAL SER VAL SEQRES 14 F 324 GLU ASP VAL THR VAL PHE VAL LEU GLY GLY HIS GLY ASP SEQRES 15 F 324 SER MET VAL PRO LEU ALA ARG TYR SER THR VAL ALA GLY SEQRES 16 F 324 ILE PRO LEU PRO ASP LEU VAL LYS MET GLY TRP THR SER SEQRES 17 F 324 GLN ASP LYS LEU ASP LYS ILE ILE GLN ARG THR ARG ASP SEQRES 18 F 324 GLY GLY ALA GLU ILE VAL GLY LEU LEU LYS THR GLY SER SEQRES 19 F 324 ALA PHE TYR ALA PRO ALA ALA SER ALA ILE GLN MET ALA SEQRES 20 F 324 GLU SER TYR LEU LYS ASP LYS LYS ARG VAL LEU PRO VAL SEQRES 21 F 324 ALA ALA GLN LEU SER GLY GLN TYR GLY VAL LYS ASP MET SEQRES 22 F 324 TYR VAL GLY VAL PRO THR VAL ILE GLY ALA ASN GLY VAL SEQRES 23 F 324 GLU ARG ILE ILE GLU ILE ASP LEU ASP LYS ASP GLU LYS SEQRES 24 F 324 ALA GLN PHE ASP LYS SER VAL ALA SER VAL ALA GLY LEU SEQRES 25 F 324 CYS GLU ALA CYS ILE GLY ILE ALA PRO SER LEU LYS
HET ADP A 401 27 HET ADP B 401 27 HET ADP C 401 27 HET ADP D 401 27 HET ADP E 401 27 HET ADP F 401 27
HETNAM ADP ADENOSINE-5'-DIPHOSPHATE
FORMUL 7 ADP 6(C10 H15 N5 O10 P2) FORMUL 13 HOH *1311(H2 O)
HELIX 1 1 GLY A 12 LYS A 25 1 14 HELIX 2 2 GLY A 38 GLY A 55 1 18 HELIX 3 3 ASP A 65 GLU A 70 5 6 HELIX 4 4 ASP A 90 ALA A 111 1 22 HELIX 5 5 PRO A 122 GLY A 135 1 14 HELIX 6 6 PRO A 137 HIS A 139 5 3 HELIX 7 7 ALA A 145 ASN A 162 1 18 HELIX 8 8 SER A 164 GLU A 166 5 3 HELIX 9 9 HIS A 176 ASP A 178 5 3 HELIX 10 10 ALA A 184 TYR A 186 5 3 HELIX 11 11 LEU A 194 MET A 200 1 7 HELIX 12 12 SER A 204 ASP A 217 1 14 HELIX 13 13 ASP A 217 LYS A 227 1 11 HELIX 14 14 PHE A 232 LYS A 248 1 17 HELIX 15 15 GLN A 263 GLY A 265 5 3 HELIX 16 16 ASP A 291 ALA A 316 1 26 HELIX 17 17 PRO A 317 LYS A 320 5 4 HELIX 18 18 GLY B 12 LYS B 25 1 14 HELIX 19 19 GLY B 38 GLY B 55 1 18 HELIX 20 20 ASP B 65 GLU B 70 5 6 HELIX 21 21 ASP B 90 ALA B 111 1 22 HELIX 22 22 PRO B 122 GLY B 135 1 14 HELIX 23 23 PRO B 137 HIS B 139 5 3 HELIX 24 24 ALA B 145 ASN B 162 1 18 HELIX 25 25 SER B 164 GLU B 166 5 3 HELIX 26 26 HIS B 176 ASP B 178 5 3 HELIX 27 27 ALA B 184 TYR B 186 5 3 HELIX 28 28 LEU B 194 MET B 200 1 7 HELIX 29 29 SER B 204 ASP B 217 1 14 HELIX 30 30 ASP B 217 LYS B 227 1 11 HELIX 31 31 PHE B 232 LYS B 248 1 17 HELIX 32 32 GLN B 263 GLY B 265 5 3 HELIX 33 33 ASP B 291 ALA B 316 1 26 HELIX 34 34 PRO B 317 LYS B 320 5 4 HELIX 35 35 GLY C 12 LYS C 25 1 14 HELIX 36 36 GLY C 38 GLY C 55 1 18 HELIX 37 37 ASP C 65 GLU C 70 5 6 HELIX 38 38 ASP C 91 ALA C 111 1 21 HELIX 39 39 PRO C 122 GLY C 135 1 14 HELIX 40 40 PRO C 137 HIS C 139 5 3 HELIX 41 41 ALA C 145 ASN C 162 1 18 HELIX 42 42 SER C 164 GLU C 166 5 3 HELIX 43 43 HIS C 176 ASP C 178 5 3 HELIX 44 44 ALA C 184 TYR C 186 5 3 HELIX 45 45 LEU C 194 GLY C 201 1 8 HELIX 46 46 SER C 204 ASP C 217 1 14 HELIX 47 47 ASP C 217 LYS C 227 1 11 HELIX 48 48 PHE C 232 LYS C 248 1 17 HELIX 49 49 GLN C 263 GLY C 265 5 3 HELIX 50 50 ASP C 291 ALA C 316 1 26 HELIX 51 51 PRO C 317 LYS C 320 5 4 HELIX 52 52 GLY D 12 LYS D 25 1 14 HELIX 53 53 GLY D 38 GLY D 55 1 18 HELIX 54 54 ASP D 65 GLU D 70 5 6 HELIX 55 55 ASP D 90 ALA D 111 1 22 HELIX 56 56 PRO D 122 GLY D 135 1 14 HELIX 57 57 PRO D 137 HIS D 139 5 3 HELIX 58 58 ALA D 145 ASN D 162 1 18 HELIX 59 59 SER D 164 GLU D 166 5 3 HELIX 60 60 HIS D 176 ASP D 178 5 3 HELIX 61 61 ALA D 184 TYR D 186 5 3 HELIX 62 62 LEU D 194 MET D 200 1 7 HELIX 63 63 SER D 204 ASP D 217 1 14 HELIX 64 64 ASP D 217 LYS D 227 1 11 HELIX 65 65 PHE D 232 LYS D 248 1 17 HELIX 66 66 GLN D 263 GLY D 265 5 3 HELIX 67 67 ASP D 291 ALA D 316 1 26 HELIX 68 68 GLY E 12 LYS E 25 1 14 HELIX 69 69 GLY E 38 GLY E 55 1 18 HELIX 70 70 ASP E 65 GLU E 70 5 6 HELIX 71 71 ASP E 90 ALA E 111 1 22 HELIX 72 72 PRO E 122 GLY E 135 1 14 HELIX 73 73 PRO E 137 HIS E 139 5 3 HELIX 74 74 ALA E 145 ASN E 162 1 18 HELIX 75 75 SER E 164 GLU E 166 5 3 HELIX 76 76 HIS E 176 ASP E 178 5 3 HELIX 77 77 ALA E 184 TYR E 186 5 3 HELIX 78 78 LEU E 194 MET E 200 1 7 HELIX 79 79 SER E 204 ASP E 217 1 14 HELIX 80 80 ASP E 217 LYS E 227 1 11 HELIX 81 81 PHE E 232 LYS E 248 1 17 HELIX 82 82 GLN E 263 GLY E 265 5 3 HELIX 83 83 ASP E 291 ALA E 316 1 26 HELIX 84 84 PRO E 317 LYS E 320 5 4 HELIX 85 85 GLY F 12 LYS F 25 1 14 HELIX 86 86 GLY F 38 GLY F 55 1 18 HELIX 87 87 ASP F 65 GLU F 70 5 6 HELIX 88 88 ASP F 90 ALA F 111 1 22 HELIX 89 89 PRO F 122 GLY F 135 1 14 HELIX 90 90 PRO F 137 HIS F 139 5 3 HELIX 91 91 ALA F 145 ASN F 162 1 18 HELIX 92 92 SER F 164 GLU F 166 5 3 HELIX 93 93 HIS F 176 ASP F 178 5 3 HELIX 94 94 ALA F 184 TYR F 186 5 3 HELIX 95 95 LEU F 194 GLY F 201 1 8 HELIX 96 96 SER F 204 ASP F 217 1 14 HELIX 97 97 ASP F 217 LYS F 227 1 11 HELIX 98 98 PHE F 232 ASP F 249 1 18 HELIX 99 99 GLN F 263 GLY F 265 5 3 HELIX 100 100 ASP F 291 ALA F 316 1 26 HELIX 101 101 PRO F 317 LYS F 320 5 4
SHEET 1 A 6 PHE A 60 ALA A 63 0 SHEET 2 A 6 ASP A 29 PHE A 33 1 N LEU A 32 O THR A 61 SHEET 3 A 6 LYS A 5 ILE A 9 1 N LEU A 8 O PHE A 33 SHEET 4 A 6 VAL A 74 VAL A 77 1 O VAL A 74 N ALA A 7 SHEET 5 A 6 PHE A 115 CYS A 118 1 O ILE A 117 N VAL A 75 SHEET 6 A 6 VAL A 141 GLY A 143 1 O VAL A 142 N VAL A 116 SHEET 1 B 3 VAL A 168 THR A 169 0 SHEET 2 B 3 THR A 188 VAL A 189 -1 O THR A 188 N THR A 169 SHEET 3 B 3 ILE A 192 PRO A 193 -1 O ILE A 192 N VAL A 189 SHEET 1 C 2 VAL A 172 GLY A 174 0 SHEET 2 C 2 MET A 180 PRO A 182 -1 O VAL A 181 N LEU A 173 SHEET 1 D 3 ARG A 252 SER A 261 0 SHEET 2 D 3 LYS A 267 GLY A 278 -1 O MET A 269 N LEU A 260 SHEET 3 D 3 GLY A 281 ILE A 285 -1 O ARG A 284 N VAL A 276 SHEET 1 E 9 PHE B 60 ALA B 63 0 SHEET 2 E 9 ASP B 29 PHE B 33 1 N LEU B 32 O THR B 61 SHEET 3 E 9 LYS B 5 ILE B 9 1 N LEU B 8 O VAL B 31 SHEET 4 E 9 VAL B 74 VAL B 77 1 O VAL B 74 N ALA B 7 SHEET 5 E 9 PHE B 115 CYS B 118 1 O ILE B 117 N VAL B 75 SHEET 6 E 9 VAL B 141 MET B 144 1 O VAL B 142 N VAL B 116 SHEET 7 E 9 ARG B 252 SER B 261 -1 O ALA B 257 N GLY B 143 SHEET 8 E 9 LYS B 267 GLY B 278 -1 O MET B 269 N LEU B 260 SHEET 9 E 9 GLY B 281 ILE B 285 -1 O GLU B 283 N VAL B 276 SHEET 1 F 3 VAL B 168 THR B 169 0 SHEET 2 F 3 THR B 188 VAL B 189 -1 O THR B 188 N THR B 169 SHEET 3 F 3 ILE B 192 PRO B 193 -1 O ILE B 192 N VAL B 189 SHEET 1 G 2 VAL B 172 GLY B 174 0 SHEET 2 G 2 MET B 180 PRO B 182 -1 O VAL B 181 N LEU B 173 SHEET 1 H 9 PHE C 60 ALA C 63 0 SHEET 2 H 9 ASP C 29 PHE C 33 1 N LEU C 32 O THR C 61 SHEET 3 H 9 LYS C 5 ILE C 9 1 N ILE C 6 O ASP C 29 SHEET 4 H 9 VAL C 74 VAL C 77 1 O VAL C 74 N ALA C 7 SHEET 5 H 9 PHE C 115 CYS C 118 1 O ILE C 117 N VAL C 75 SHEET 6 H 9 VAL C 141 MET C 144 1 O VAL C 142 N CYS C 118 SHEET 7 H 9 ARG C 252 SER C 261 -1 O ALA C 257 N GLY C 143 SHEET 8 H 9 LYS C 267 GLY C 278 -1 O THR C 275 N LEU C 254 SHEET 9 H 9 GLY C 281 ILE C 285 -1 O GLY C 281 N GLY C 278 SHEET 1 I 3 VAL C 168 THR C 169 0 SHEET 2 I 3 THR C 188 VAL C 189 -1 O THR C 188 N THR C 169 SHEET 3 I 3 ILE C 192 PRO C 193 -1 O ILE C 192 N VAL C 189 SHEET 1 J 2 VAL C 172 GLY C 174 0 SHEET 2 J 2 MET C 180 PRO C 182 -1 O VAL C 181 N LEU C 173 SHEET 1 K 6 PHE D 60 ALA D 63 0 SHEET 2 K 6 ASP D 29 PHE D 33 1 N LEU D 32 O THR D 61 SHEET 3 K 6 LYS D 5 ILE D 9 1 N LEU D 8 O PHE D 33 SHEET 4 K 6 VAL D 74 VAL D 77 1 O VAL D 74 N ALA D 7 SHEET 5 K 6 PHE D 115 CYS D 118 1 O ILE D 117 N VAL D 75 SHEET 6 K 6 VAL D 141 GLY D 143 1 O VAL D 142 N CYS D 118 SHEET 1 L 3 VAL D 168 THR D 169 0 SHEET 2 L 3 THR D 188 VAL D 189 -1 O THR D 188 N THR D 169 SHEET 3 L 3 ILE D 192 PRO D 193 -1 O ILE D 192 N VAL D 189 SHEET 1 M 2 VAL D 172 GLY D 174 0 SHEET 2 M 2 MET D 180 PRO D 182 -1 O VAL D 181 N LEU D 173 SHEET 1 N 3 ARG D 252 SER D 261 0 SHEET 2 N 3 LYS D 267 GLY D 278 -1 O MET D 269 N LEU D 260 SHEET 3 N 3 GLY D 281 ILE D 285 -1 O GLU D 283 N VAL D 276 SHEET 1 O 6 PHE E 60 ALA E 63 0 SHEET 2 O 6 ASP E 29 PHE E 33 1 N LEU E 32 O THR E 61 SHEET 3 O 6 LYS E 5 ILE E 9 1 N LEU E 8 O VAL E 31 SHEET 4 O 6 VAL E 74 VAL E 77 1 O VAL E 74 N ALA E 7 SHEET 5 O 6 PHE E 115 CYS E 118 1 O PHE E 115 N VAL E 75 SHEET 6 O 6 VAL E 141 GLY E 143 1 O VAL E 142 N CYS E 118 SHEET 1 P 3 VAL E 168 THR E 169 0 SHEET 2 P 3 THR E 188 VAL E 189 -1 O THR E 188 N THR E 169 SHEET 3 P 3 ILE E 192 PRO E 193 -1 O ILE E 192 N VAL E 189 SHEET 1 Q 2 VAL E 172 GLY E 174 0 SHEET 2 Q 2 MET E 180 PRO E 182 -1 O VAL E 181 N LEU E 173 SHEET 1 R 3 ARG E 252 SER E 261 0 SHEET 2 R 3 LYS E 267 GLY E 278 -1 O VAL E 273 N VAL E 256 SHEET 3 R 3 GLY E 281 ILE E 285 -1 O ARG E 284 N VAL E 276 SHEET 1 S 6 PHE F 60 ALA F 63 0 SHEET 2 S 6 ASP F 29 PHE F 33 1 N LEU F 32 O THR F 61 SHEET 3 S 6 LYS F 5 ILE F 9 1 N ILE F 6 O VAL F 31 SHEET 4 S 6 VAL F 74 VAL F 77 1 O VAL F 74 N ALA F 7 SHEET 5 S 6 PHE F 115 CYS F 118 1 O ILE F 117 N VAL F 75 SHEET 6 S 6 VAL F 141 GLY F 143 1 O VAL F 142 N CYS F 118 SHEET 1 T 3 VAL F 168 THR F 169 0 SHEET 2 T 3 THR F 188 VAL F 189 -1 O THR F 188 N THR F 169 SHEET 3 T 3 ILE F 192 PRO F 193 -1 O ILE F 192 N VAL F 189 SHEET 1 U 2 VAL F 172 GLY F 174 0 SHEET 2 U 2 MET F 180 PRO F 182 -1 O VAL F 181 N LEU F 173 SHEET 1 V 3 ARG F 252 SER F 261 0 SHEET 2 V 3 LYS F 267 GLY F 278 -1 O MET F 269 N LEU F 260 SHEET 3 V 3 GLY F 281 ILE F 285 -1 O GLU F 283 N VAL F 276
CISPEP 1 ASN A 121 PRO A 122 0 -7.37 CISPEP 2 ASN B 121 PRO B 122 0 -3.34 CISPEP 3 ASN C 121 PRO C 122 0 -6.22 CISPEP 4 ASN D 121 PRO D 122 0 -6.47 CISPEP 5 ASN E 121 PRO E 122 0 -7.62 CISPEP 6 ASN F 121 PRO F 122 0 -4.34
SITE 1 AC1 16 GLY A 12 MET A 13 ILE A 14 ASP A 34 SITE 2 AC1 16 ILE A 35 ALA A 79 GLY A 80 GLN A 102 SITE 3 AC1 16 HOH A 340 HOH A 354 HOH A 359 HOH A 391 SITE 4 AC1 16 HOH A 448 HOH A 528 HOH A 831 HOH A1210 SITE 1 AC2 17 GLY B 12 MET B 13 ILE B 14 PHE B 33 SITE 2 AC2 17 ASP B 34 ILE B 35 ALA B 79 GLY B 80 SITE 3 AC2 17 GLN B 102 HOH B 338 HOH B 372 HOH B 378 SITE 4 AC2 17 HOH B 385 HOH B 390 HOH B 990 HOH B1076 SITE 5 AC2 17 HOH B1236 SITE 1 AC3 15 GLY C 12 MET C 13 ILE C 14 PHE C 33 SITE 2 AC3 15 ASP C 34 ILE C 35 ALA C 79 GLY C 80 SITE 3 AC3 15 GLN C 102 HOH C 323 HOH C 350 HOH C 360 SITE 4 AC3 15 HOH C 366 HOH C 727 HOH C1258 SITE 1 AC4 16 GLY D 12 MET D 13 ILE D 14 ASP D 34 SITE 2 AC4 16 ILE D 35 ALA D 79 GLY D 80 VAL D 99 SITE 3 AC4 16 GLN D 102 HOH D 332 HOH D 336 HOH D 338 SITE 4 AC4 16 HOH D 586 HOH D 635 HOH D 841 HOH D1102 SITE 1 AC5 18 GLY E 12 MET E 13 ILE E 14 PHE E 33 SITE 2 AC5 18 ASP E 34 ILE E 35 ALA E 79 GLY E 80 SITE 3 AC5 18 VAL E 99 GLN E 102 HOH E 341 HOH E 445 SITE 4 AC5 18 HOH E 523 HOH E 600 HOH E 670 HOH E1108 SITE 5 AC5 18 HOH E1298 HOH E1299 SITE 1 AC6 17 GLY F 12 MET F 13 ILE F 14 ASP F 34 SITE 2 AC6 17 ILE F 35 ALA F 79 GLY F 80 VAL F 99 SITE 3 AC6 17 GLN F 102 HOH F 324 HOH F 345 HOH F 363 SITE 4 AC6 17 HOH F 414 HOH F 645 HOH F 730 HOH F 959 SITE 5 AC6 17 HOH F1031
CRYST1 107.390 193.900 102.680 90.00 90.00 90.00 P 21 21 2 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009312 0.000000 0.000000 0.00000
SCALE2 0.000000 0.005157 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009739 0.00000