10 20 30 40 50 60 70 80 3GSN - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER IMMUNE SYSTEM 27-MAR-09 3GSN
TITLE CRYSTAL STRUCTURE OF THE PUBLIC RA14 TCR IN COMPLEX WITH THE TITLE 2 HCMV DOMINANT NLV/HLA-A2 EPITOPE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA COMPND 3 CHAIN; COMPND 4 CHAIN: H; COMPND 5 SYNONYM: MHC CLASS I ANTIGEN A*2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: HCMV PP65 FRAGMENT 495-503 (NLVPMVATV); COMPND 10 CHAIN: P; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 14 CHAIN: L; COMPND 15 SYNONYM: BETA-2-MICROGLOBULIN FORM PI 5.3; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: RA14 TCR ALPHA CHAIN (TRAV24, TRAJ49); COMPND 19 CHAIN: A; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: RA14 TCR BETA CHAIN (TRBV6-5, TRBD1, TRBJ1-2); COMPND 23 CHAIN: B; COMPND 24 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA, HLA-A, HLAA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: X90F LAQQ1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHN1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: B2M, BETA-2 MICROGLUBULIN, CDABP0092, HDCMA22P; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: X90F LAQQ1; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PHN1; SOURCE 23 MOL_ID: 4; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_COMMON: HUMAN; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 GENE: TCR; SOURCE 28 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 30 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 32 EXPRESSION_SYSTEM_PLASMID: PLM1; SOURCE 33 MOL_ID: 5; SOURCE 34 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 35 ORGANISM_COMMON: HUMAN; SOURCE 36 ORGANISM_TAXID: 9606; SOURCE 37 GENE: TCR; SOURCE 38 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 39 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 40 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 41 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 42 EXPRESSION_SYSTEM_PLASMID: PET22B
KEYWDS HLA, HUMAN CYTOMEGALOVIRUS, PP65, T CELL RECEPTOR (TCR), KEYWDS 2 IMMUNE RESPONSE, PUBLIC RESPONSE, IMMUNODOMINANCE, KEYWDS 3 RESTRAINED RESPONSE, HOST-VIRUS INTERACTION, MEMBRANE, MHC KEYWDS 4 I, POLYMORPHISM, IMMUNOGLOBULIN DOMAIN, IMMUNE SYSTEM
EXPDTA X-RAY DIFFRACTION
AUTHOR S.GRAS,X.SAULQUIN,J.-B.REISER,E.DEBEAUPUIS,K.ECHASSERIEAU, AUTHOR 2 A.KISSENPFENNIG,F.LEGOUX,A.CHOUQUET,M.LE GORREC, AUTHOR 3 P.MACHILLOT,B.NEVEU,N.THIELENS,B.MALISSEN,M.BONNEVILLE, AUTHOR 4 D.HOUSSET
REVDAT 1 04-AUG-09 3GSN 0
JRNL AUTH S.GRAS,X.SAULQUIN,J.B.REISER,E.DEBEAUPUIS, JRNL AUTH 2 K.ECHASSERIEAU,A.KISSENPFENNIG,F.LEGOUX,A.CHOUQUET, JRNL AUTH 3 M.LE GORREC,P.MACHILLOT,B.NEVEU,N.THIELENS, JRNL AUTH 4 B.MALISSEN,M.BONNEVILLE,D.HOUSSET JRNL TITL STRUCTURAL BASES FOR THE AFFINITY-DRIVEN SELECTION JRNL TITL 2 OF A PUBLIC TCR AGAINST A DOMINANT HUMAN JRNL TITL 3 CYTOMEGALOVIRUS EPITOPE. JRNL REF J.IMMUNOL. V. 183 430 2009 JRNL REFN ISSN 0022-1767 JRNL PMID 19542454 JRNL DOI 10.4049/JIMMUNOL.0900556
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 22857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2277 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1650 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3450 REMARK 3 BIN FREE R VALUE SET COUNT : 179 REMARK 3 BIN FREE R VALUE : 0.4510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6617 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 24 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.77000 REMARK 3 B22 (A**2) : 0.78000 REMARK 3 B33 (A**2) : 2.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.54000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.265 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.701 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.904 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6806 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9255 ; 0.962 ; 1.929 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 820 ; 5.639 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 345 ;33.681 ;23.884 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1085 ;19.717 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 45 ;18.440 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 972 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5324 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3376 ; 0.261 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4542 ; 0.333 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 393 ; 0.247 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 65 ; 0.265 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.347 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4116 ; 0.506 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6657 ; 0.920 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2690 ; 0.589 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2598 ; 0.923 ; 4.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 3GSN COMPLIES WITH FORMAT V. 3.20, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-09. REMARK 100 THE RCSB ID CODE IS RCSB052259.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22991 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 3.720 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : 0.11700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.66 REMARK 200 R MERGE FOR SHELL (I) : 0.44400 REMARK 200 R SYM FOR SHELL (I) : 0.44400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.370 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-24% PEG 3350, 0.3M LISO4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.53000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, P, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 151 OG SER A 176 2.14 REMARK 500 NE1 TRP A 38 O LYS A 42 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO H 15 -86.36 -41.14 REMARK 500 ARG H 17 178.93 -59.67 REMARK 500 ASP H 29 83.09 42.44 REMARK 500 ASP H 30 11.95 59.72 REMARK 500 PRO H 50 -7.61 -41.88 REMARK 500 GLU H 55 49.79 168.11 REMARK 500 PRO H 57 -82.54 -114.96 REMARK 500 ASP H 77 -31.26 -37.06 REMARK 500 ALA H 90 -100.80 -57.88 REMARK 500 TRP H 107 9.85 98.20 REMARK 500 PHE H 109 122.83 -37.96 REMARK 500 HIS H 114 106.88 -162.98 REMARK 500 TYR H 123 -46.75 -132.27 REMARK 500 GLU H 166 -32.69 -34.33 REMARK 500 HIS H 191 115.81 -163.43 REMARK 500 SER H 195 -140.68 -159.85 REMARK 500 HIS H 197 -25.97 -159.62 REMARK 500 THR H 200 -80.19 -117.00 REMARK 500 LEU H 201 103.08 80.44 REMARK 500 ALA H 205 112.68 -163.71 REMARK 500 SER H 207 54.20 38.95 REMARK 500 ASP H 220 35.93 77.17 REMARK 500 THR H 225 15.08 37.09 REMARK 500 GLU H 229 88.17 -168.88 REMARK 500 GLU H 254 -44.85 -141.94 REMARK 500 GLN H 255 22.62 -70.07 REMARK 500 THR H 258 -161.36 -105.98 REMARK 500 HIS H 263 145.37 177.19 REMARK 500 PRO H 267 -84.56 -48.03 REMARK 500 PRO H 269 72.44 -53.61 REMARK 500 LEU H 270 131.82 -39.62 REMARK 500 HIS L 13 -140.46 -97.76 REMARK 500 LYS L 19 -150.90 -82.04 REMARK 500 ASN L 21 -166.23 -113.11 REMARK 500 GLU L 47 -90.90 -43.92 REMARK 500 ARG L 97 -70.42 -74.84 REMARK 500 ASN A 20 74.86 -178.29 REMARK 500 PHE A 21 -170.87 -66.88 REMARK 500 ASN A 29 20.56 87.37 REMARK 500 TYR A 31 -36.71 -138.04 REMARK 500 LEU A 47 -75.38 -98.76 REMARK 500 THR A 51 -53.74 -130.67 REMARK 500 ALA A 64 148.41 -171.13 REMARK 500 LYS A 78 -153.54 -71.64 REMARK 500 ALA A 86 166.47 162.63 REMARK 500 THR A 94 -40.07 -140.41 REMARK 500 ASN A 96 3.07 56.19 REMARK 500 ASN A 114 88.75 20.80 REMARK 500 ASP A 124 -136.48 -68.17 REMARK 500 SER A 127 -102.65 38.95 REMARK 500 LYS A 130 -25.15 51.11 REMARK 500 SER A 131 71.02 12.08 REMARK 500 THR A 142 -92.47 -94.87 REMARK 500 SER A 145 -67.50 -164.52 REMARK 500 GLN A 146 -150.33 -116.58 REMARK 500 SER A 147 -128.95 -148.88 REMARK 500 LYS A 148 85.76 -63.49 REMARK 500 SER A 150 -64.83 -153.25 REMARK 500 ASP A 151 46.92 -105.44 REMARK 500 LEU A 160 -123.31 -131.02 REMARK 500 ASP A 161 -173.37 -66.82 REMARK 500 MET A 162 -122.82 -97.93 REMARK 500 SER A 164 -51.87 -166.06 REMARK 500 ASP A 166 132.33 67.52 REMARK 500 ASN A 170 74.45 -116.04 REMARK 500 SER A 179 -19.35 80.89 REMARK 500 PHE A 181 -75.52 -37.98 REMARK 500 ALA A 182 102.95 100.53 REMARK 500 CYS A 183 -175.64 -67.83 REMARK 500 ASN A 185 -12.11 177.48 REMARK 500 ASN A 189 -9.59 -57.64 REMARK 500 ILE A 191 79.11 -113.17 REMARK 500 PRO A 193 -169.03 -64.03 REMARK 500 THR B 15 136.29 -39.02 REMARK 500 ILE B 46 -82.28 -96.73 REMARK 500 ARG B 68 66.41 -151.39 REMARK 500 LEU B 79 -74.37 -30.04 REMARK 500 SER B 87 -177.95 178.90 REMARK 500 TYR B 101 148.46 -39.45 REMARK 500 LEU B 117 -9.75 -58.27 REMARK 500 GLU B 132 6.06 -61.46 REMARK 500 GLN B 139 39.75 72.20 REMARK 500 ASN B 162 -15.52 56.95 REMARK 500 PRO B 181 27.77 -57.37 REMARK 500 LEU B 183 96.33 -178.85 REMARK 500 ASN B 184 -3.55 87.75 REMARK 500 ARG B 209 113.29 -160.57 REMARK 500 GLU B 219 89.00 -57.76 REMARK 500 ASN B 220 -43.43 174.04 REMARK 500 ARG B 242 132.02 -171.75 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 L 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GSO RELATED DB: PDB REMARK 900 RELATED ID: 3GSQ RELATED DB: PDB REMARK 900 RELATED ID: 3GSR RELATED DB: PDB REMARK 900 RELATED ID: 3GSU RELATED DB: PDB REMARK 900 RELATED ID: 3GSV RELATED DB: PDB REMARK 900 RELATED ID: 3GSW RELATED DB: PDB REMARK 900 RELATED ID: 3GSX RELATED DB: PDB
DBREF 3GSN H 1 274 UNP P01892 1A02_HUMAN 25 298 DBREF 3GSN L 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 3GSN P 1 9 PDB 3GSN 3GSN 1 9 DBREF 3GSN A 2 200 PDB 3GSN 3GSN 2 200 DBREF 3GSN B 2 244 PDB 3GSN 3GSN 2 244
SEQADV 3GSN VAL H 245 UNP P01892 ALA 269 ENGINEERED SEQADV 3GSN MET L 0 UNP P61769 INITIATING METHIONINE
SEQRES 1 H 274 GLY SER HIS SER MET ARG TYR PHE PHE THR SER VAL SER SEQRES 2 H 274 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 H 274 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 H 274 ALA ALA SER GLN ARG MET GLU PRO ARG ALA PRO TRP ILE SEQRES 5 H 274 GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU THR ARG SEQRES 6 H 274 LYS VAL LYS ALA HIS SER GLN THR HIS ARG VAL ASP LEU SEQRES 7 H 274 GLY THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 H 274 SER HIS THR VAL GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 H 274 SER ASP TRP ARG PHE LEU ARG GLY TYR HIS GLN TYR ALA SEQRES 10 H 274 TYR ASP GLY LYS ASP TYR ILE ALA LEU LYS GLU ASP LEU SEQRES 11 H 274 ARG SER TRP THR ALA ALA ASP MET ALA ALA GLN THR THR SEQRES 12 H 274 LYS HIS LYS TRP GLU ALA ALA HIS VAL ALA GLU GLN LEU SEQRES 13 H 274 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 H 274 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG THR SEQRES 15 H 274 ASP ALA PRO LYS THR HIS MET THR HIS HIS ALA VAL SER SEQRES 16 H 274 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SER PHE SEQRES 17 H 274 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 H 274 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 H 274 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP VAL ALA VAL SEQRES 20 H 274 VAL VAL PRO SER GLY GLN GLU GLN ARG TYR THR CYS HIS SEQRES 21 H 274 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 H 274 TRP SEQRES 1 P 9 ASN LEU VAL PRO MET VAL ALA THR VAL SEQRES 1 L 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 L 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 L 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 L 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 L 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 L 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 L 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 L 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 A 199 LEU ASN VAL GLU GLN SER PRO GLN SER LEU HIS VAL GLN SEQRES 2 A 199 GLU GLY ASP SER THR ASN PHE THR CYS SER PHE PRO SER SEQRES 3 A 199 SER ASN PHE TYR ALA LEU HIS TRP TYR ARG TRP GLU THR SEQRES 4 A 199 ALA LYS SER PRO GLU ALA LEU PHE VAL MET THR LEU ASN SEQRES 5 A 199 GLY ASP GLU LYS LYS LYS GLY ARG ILE SER ALA THR LEU SEQRES 6 A 199 ASN THR LYS GLU GLY TYR SER TYR LEU TYR ILE LYS GLY SEQRES 7 A 199 SER GLN PRO GLU ASP SER ALA THR TYR LEU CYS ALA ARG SEQRES 8 A 199 ASN THR GLY ASN GLN PHE TYR PHE GLY THR GLY THR SER SEQRES 9 A 199 LEU THR VAL ILE PRO ASN ILE GLN ASN PRO ASP PRO ALA SEQRES 10 A 199 VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SER SEQRES 11 A 199 VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN VAL SEQRES 12 A 199 SER GLN SER LYS ASP SER ASP ALA TYR ILE THR ASP LYS SEQRES 13 A 199 THR VAL LEU ASP MET ARG SER MET ASP PHE LYS SER ASN SEQRES 14 A 199 SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA CYS SEQRES 15 A 199 ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP THR SEQRES 16 A 199 PHE PHE PRO SER SEQRES 1 B 243 MET GLY VAL THR GLN THR PRO LYS PHE GLN VAL LEU LYS SEQRES 2 B 243 THR GLY GLN SER MET THR LEU GLN CYS ALA GLN ASP MET SEQRES 3 B 243 ASN HIS GLU TYR MET SER TRP TYR ARG GLN ASP PRO GLY SEQRES 4 B 243 MET GLY LEU ARG LEU ILE HIS TYR SER VAL GLY ALA GLY SEQRES 5 B 243 ILE THR ASP GLN GLY GLU VAL PRO ASN GLY TYR ASN VAL SEQRES 6 B 243 SER ARG SER THR THR GLU ASP PHE PRO LEU ARG LEU LEU SEQRES 7 B 243 SER ALA ALA PRO SER GLN THR SER VAL TYR PHE CYS ALA SEQRES 8 B 243 SER SER PRO VAL THR GLY GLY ILE TYR GLY TYR THR PHE SEQRES 9 B 243 GLY SER GLY THR ARG LEU THR VAL VAL GLU ASP LEU ASN SEQRES 10 B 243 LYS VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SER SEQRES 11 B 243 GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU VAL SEQRES 12 B 243 CYS LEU ALA THR GLY PHE PHE PRO ASP HIS VAL GLU LEU SEQRES 13 B 243 SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY VAL SEQRES 14 B 243 SER THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA LEU SEQRES 15 B 243 ASN ASP SER ARG TYR CYS LEU SER SER ARG LEU ARG VAL SEQRES 16 B 243 SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE ARG SEQRES 17 B 243 CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP GLU SEQRES 18 B 243 TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE VAL SEQRES 19 B 243 SER ALA GLU ALA TRP GLY ARG ALA ASP
HET SO4 L 800 5 HET CL A 1 1
HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION
FORMUL 6 SO4 O4 S 2- FORMUL 7 CL CL 1- FORMUL 8 HOH *24(H2 O)
HELIX 1 1 GLU H 58 TYR H 85 1 28 HELIX 2 2 MET H 138 ALA H 150 1 13 HELIX 3 3 HIS H 151 GLY H 162 1 12 HELIX 4 4 GLY H 162 GLY H 175 1 14 HELIX 5 5 GLY H 175 GLN H 180 1 6 HELIX 6 6 GLN A 81 SER A 85 5 5 HELIX 7 7 ALA B 82 THR B 86 5 5 HELIX 8 8 ASP B 116 VAL B 120 5 5 HELIX 9 9 GLU B 134 GLN B 139 1 6 HELIX 10 10 ALA B 198 ASN B 203 1 6
SHEET 1 A 8 GLU H 46 PRO H 47 0 SHEET 2 A 8 GLN H 32 ASP H 37 -1 N ARG H 35 O GLU H 46 SHEET 3 A 8 ARG H 21 VAL H 28 -1 N ALA H 24 O PHE H 36 SHEET 4 A 8 HIS H 3 VAL H 12 -1 N ARG H 6 O TYR H 27 SHEET 5 A 8 THR H 94 VAL H 103 -1 O ARG H 97 N PHE H 9 SHEET 6 A 8 PHE H 109 TYR H 118 -1 O ARG H 111 N ASP H 102 SHEET 7 A 8 LYS H 121 LEU H 126 -1 O LEU H 126 N HIS H 114 SHEET 8 A 8 TRP H 133 ALA H 135 -1 O THR H 134 N ALA H 125 SHEET 1 B 4 MET H 189 THR H 190 0 SHEET 2 B 4 ARG H 202 PHE H 208 -1 O ARG H 202 N THR H 190 SHEET 3 B 4 PHE H 241 ALA H 246 -1 O VAL H 245 N CYS H 203 SHEET 4 B 4 ARG H 234 PRO H 235 -1 N ARG H 234 O GLN H 242 SHEET 1 C 2 GLU H 198 ALA H 199 0 SHEET 2 C 2 VAL H 249 PRO H 250 -1 O VAL H 249 N ALA H 199 SHEET 1 D 2 THR H 214 THR H 216 0 SHEET 2 D 2 HIS H 260 GLN H 262 -1 O HIS H 260 N THR H 216 SHEET 1 E 2 GLN H 218 ARG H 219 0 SHEET 2 E 2 GLU H 222 ASP H 223 -1 O GLU H 222 N ARG H 219 SHEET 1 F 4 LYS L 6 TYR L 10 0 SHEET 2 F 4 ASN L 21 PHE L 30 -1 O ASN L 24 N TYR L 10 SHEET 3 F 4 PHE L 62 PHE L 70 -1 O THR L 68 N LEU L 23 SHEET 4 F 4 GLU L 50 HIS L 51 -1 N GLU L 50 O TYR L 67 SHEET 1 G 4 LYS L 6 TYR L 10 0 SHEET 2 G 4 ASN L 21 PHE L 30 -1 O ASN L 24 N TYR L 10 SHEET 3 G 4 PHE L 62 PHE L 70 -1 O THR L 68 N LEU L 23 SHEET 4 G 4 SER L 55 PHE L 56 -1 N SER L 55 O TYR L 63 SHEET 1 H 3 LEU L 39 LYS L 41 0 SHEET 2 H 3 TYR L 78 VAL L 82 -1 O ALA L 79 N LEU L 40 SHEET 3 H 3 LYS L 91 LYS L 94 -1 O LYS L 91 N VAL L 82 SHEET 1 I 3 GLU A 5 SER A 7 0 SHEET 2 I 3 ASN A 20 SER A 24 -1 O THR A 22 N SER A 7 SHEET 3 I 3 TYR A 72 TYR A 76 -1 O SER A 73 N CYS A 23 SHEET 1 J 5 SER A 10 GLN A 14 0 SHEET 2 J 5 THR A 104 ILE A 109 1 O THR A 107 N LEU A 11 SHEET 3 J 5 ALA A 86 ASN A 93 -1 N TYR A 88 O THR A 104 SHEET 4 J 5 LEU A 33 TRP A 38 -1 N TRP A 38 O THR A 87 SHEET 5 J 5 GLU A 45 MET A 50 -1 O LEU A 47 N TRP A 35 SHEET 1 K 4 SER A 10 GLN A 14 0 SHEET 2 K 4 THR A 104 ILE A 109 1 O THR A 107 N LEU A 11 SHEET 3 K 4 ALA A 86 ASN A 93 -1 N TYR A 88 O THR A 104 SHEET 4 K 4 PHE A 98 PHE A 100 -1 O TYR A 99 N ARG A 92 SHEET 1 L 2 LYS A 58 LYS A 59 0 SHEET 2 L 2 ILE A 62 SER A 63 -1 O ILE A 62 N LYS A 59 SHEET 1 M 4 ALA A 118 GLN A 121 0 SHEET 2 M 4 CYS A 133 THR A 136 -1 O LEU A 134 N TYR A 120 SHEET 3 M 4 ALA A 172 SER A 176 -1 O ALA A 174 N CYS A 133 SHEET 4 M 4 ALA A 152 ILE A 154 -1 N TYR A 153 O TRP A 175 SHEET 1 N 4 VAL B 4 THR B 7 0 SHEET 2 N 4 MET B 19 GLN B 25 -1 O GLN B 22 N THR B 7 SHEET 3 N 4 LEU B 76 LEU B 78 -1 O LEU B 76 N LEU B 21 SHEET 4 N 4 TYR B 64 VAL B 66 -1 N ASN B 65 O ARG B 77 SHEET 1 O 6 PHE B 10 LYS B 14 0 SHEET 2 O 6 THR B 109 VAL B 114 1 O VAL B 114 N LEU B 13 SHEET 3 O 6 SER B 87 SER B 94 -1 N SER B 87 O LEU B 111 SHEET 4 O 6 TYR B 31 ASP B 38 -1 N SER B 33 O ALA B 92 SHEET 5 O 6 GLY B 42 GLY B 51 -1 O ILE B 46 N TRP B 34 SHEET 6 O 6 ILE B 54 GLN B 57 -1 O ASP B 56 N TYR B 48 SHEET 1 P 4 PHE B 10 LYS B 14 0 SHEET 2 P 4 THR B 109 VAL B 114 1 O VAL B 114 N LEU B 13 SHEET 3 P 4 SER B 87 SER B 94 -1 N SER B 87 O LEU B 111 SHEET 4 P 4 THR B 104 PHE B 105 -1 O THR B 104 N SER B 93 SHEET 1 Q 4 GLU B 124 PHE B 128 0 SHEET 2 Q 4 LYS B 140 PHE B 150 -1 O LEU B 146 N ALA B 126 SHEET 3 Q 4 TYR B 188 SER B 197 -1 O LEU B 194 N LEU B 143 SHEET 4 Q 4 VAL B 170 THR B 172 -1 N SER B 171 O ARG B 193 SHEET 1 R 4 GLU B 124 PHE B 128 0 SHEET 2 R 4 LYS B 140 PHE B 150 -1 O LEU B 146 N ALA B 126 SHEET 3 R 4 TYR B 188 SER B 197 -1 O LEU B 194 N LEU B 143 SHEET 4 R 4 LEU B 177 LYS B 178 -1 N LEU B 177 O CYS B 189 SHEET 1 S 3 VAL B 155 VAL B 161 0 SHEET 2 S 3 HIS B 207 PHE B 214 -1 O GLN B 211 N SER B 158 SHEET 3 S 3 GLN B 233 TRP B 240 -1 O ALA B 239 N PHE B 208
SSBOND 1 CYS H 101 CYS H 164 1555 1555 2.03 SSBOND 2 CYS H 203 CYS H 259 1555 1555 2.03 SSBOND 3 CYS L 25 CYS L 80 1555 1555 2.03 SSBOND 4 CYS A 23 CYS A 90 1555 1555 2.04 SSBOND 5 CYS A 133 CYS A 183 1555 1555 2.03 SSBOND 6 CYS B 23 CYS B 91 1555 1555 2.03 SSBOND 7 CYS B 145 CYS B 210 1555 1555 2.03
CISPEP 1 TYR H 209 PRO H 210 0 3.35 CISPEP 2 HIS L 31 PRO L 32 0 5.51 CISPEP 3 SER A 7 PRO A 8 0 -3.11 CISPEP 4 GLY A 95 ASN A 96 0 0.84 CISPEP 5 ASP A 161 MET A 162 0 5.17 CISPEP 6 MET B 2 GLY B 3 0 3.56 CISPEP 7 THR B 7 PRO B 8 0 2.57 CISPEP 8 PHE B 151 PRO B 152 0 -1.77 CISPEP 9 ALA B 182 LEU B 183 0 -2.24
SITE 1 AC1 2 ARG H 21 HIS L 51 SITE 1 AC2 2 ASN A 29 ARG A 92
CRYST1 75.450 77.060 87.220 90.00 101.95 90.00 P 1 21 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013254 0.000000 0.002805 0.00000
SCALE2 0.000000 0.012977 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011719 0.00000